Multiple sequence alignment - TraesCS4B01G178100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G178100 chr4B 100.000 5713 0 0 1 5713 389463002 389468714 0.000000e+00 10551.0
1 TraesCS4B01G178100 chr4B 100.000 30 0 0 5556 5585 389468586 389468557 8.000000e-04 56.5
2 TraesCS4B01G178100 chr4A 95.142 2388 100 10 1401 3779 163828951 163826571 0.000000e+00 3753.0
3 TraesCS4B01G178100 chr4A 93.025 1405 62 18 3941 5332 163826572 163825191 0.000000e+00 2019.0
4 TraesCS4B01G178100 chr4A 88.529 1360 94 39 6 1324 163830305 163828967 0.000000e+00 1591.0
5 TraesCS4B01G178100 chr4A 94.624 186 10 0 3767 3952 26539765 26539950 7.240000e-74 289.0
6 TraesCS4B01G178100 chr4D 92.981 2365 116 22 1428 3779 312792569 312794896 0.000000e+00 3402.0
7 TraesCS4B01G178100 chr4D 94.444 1134 40 12 3941 5061 312794895 312796018 0.000000e+00 1724.0
8 TraesCS4B01G178100 chr4D 87.275 888 44 37 7 857 312791080 312791935 0.000000e+00 950.0
9 TraesCS4B01G178100 chr4D 92.494 453 26 3 895 1339 312791935 312792387 4.830000e-180 641.0
10 TraesCS4B01G178100 chr4D 90.541 148 11 2 5182 5329 312796153 312796297 5.840000e-45 193.0
11 TraesCS4B01G178100 chr4D 95.402 87 4 0 5101 5187 312796022 312796108 7.720000e-29 139.0
12 TraesCS4B01G178100 chr5A 97.175 177 4 1 3778 3953 290391861 290391685 1.200000e-76 298.0
13 TraesCS4B01G178100 chr2A 98.246 171 2 1 3772 3942 94112381 94112550 1.200000e-76 298.0
14 TraesCS4B01G178100 chr2A 96.386 83 3 0 5631 5713 728593816 728593898 2.780000e-28 137.0
15 TraesCS4B01G178100 chr3B 97.126 174 5 0 3769 3942 655849594 655849421 1.560000e-75 294.0
16 TraesCS4B01G178100 chr1D 97.126 174 5 0 3778 3951 178466306 178466479 1.560000e-75 294.0
17 TraesCS4B01G178100 chr1D 97.126 174 5 0 3769 3942 331539256 331539429 1.560000e-75 294.0
18 TraesCS4B01G178100 chr7A 95.628 183 7 1 3770 3952 115807695 115807514 5.600000e-75 292.0
19 TraesCS4B01G178100 chr5D 96.067 178 7 0 3768 3945 322384923 322385100 2.010000e-74 291.0
20 TraesCS4B01G178100 chr3A 92.386 197 11 3 3757 3949 469078384 469078188 1.570000e-70 278.0
21 TraesCS4B01G178100 chr6A 97.333 75 2 0 5639 5713 93458013 93458087 1.670000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G178100 chr4B 389463002 389468714 5712 False 10551.000000 10551 100.0000 1 5713 1 chr4B.!!$F1 5712
1 TraesCS4B01G178100 chr4A 163825191 163830305 5114 True 2454.333333 3753 92.2320 6 5332 3 chr4A.!!$R1 5326
2 TraesCS4B01G178100 chr4D 312791080 312796297 5217 False 1174.833333 3402 92.1895 7 5329 6 chr4D.!!$F1 5322

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
64 65 0.179089 CTTCCTCCTCTGCATCCACG 60.179 60.000 0.00 0.00 0.00 4.94 F
311 333 0.804364 TGCGCTTCACATTTGCTAGG 59.196 50.000 9.73 0.00 0.00 3.02 F
608 676 0.810648 CCGCAGGCACATGTGTTTAT 59.189 50.000 26.01 7.92 46.14 1.40 F
859 928 0.833287 AGGCTGCCTCACGATACAAT 59.167 50.000 17.22 0.00 0.00 2.71 F
942 1012 0.889994 AAGCCTGATTTCATTGCGCA 59.110 45.000 5.66 5.66 0.00 6.09 F
1840 2020 1.536149 CGAGTTCGAAGTTCTAGCCG 58.464 55.000 6.99 1.04 43.02 5.52 F
2585 2770 1.552578 TGCTTGATGCTGCTGGAAAT 58.447 45.000 0.00 0.00 43.37 2.17 F
2752 2940 2.447443 TCTTCGACTGTACAGGCTGAT 58.553 47.619 25.95 4.81 33.16 2.90 F
3840 4032 0.606096 TGGACTACCACACACGGATG 59.394 55.000 0.00 0.00 41.77 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1074 1144 0.331616 CAAAGGTCCCTTCCCCGATT 59.668 55.0 0.00 0.00 34.84 3.34 R
1352 1431 0.476338 TTGCTGGCTTGGTTACTGGA 59.524 50.0 0.00 0.00 0.00 3.86 R
1822 2002 2.633199 ACGGCTAGAACTTCGAACTC 57.367 50.0 0.00 0.00 0.00 3.01 R
2741 2929 0.035056 AGCAACCCATCAGCCTGTAC 60.035 55.0 0.00 0.00 0.00 2.90 R
2752 2940 1.042003 ATGTTGTGTGCAGCAACCCA 61.042 50.0 23.24 11.88 43.86 4.51 R
3821 4013 0.606096 CATCCGTGTGTGGTAGTCCA 59.394 55.0 0.00 0.00 42.05 4.02 R
3822 4014 0.606604 ACATCCGTGTGTGGTAGTCC 59.393 55.0 0.00 0.00 37.14 3.85 R
4646 4844 0.608640 CTACGTCCTTGAGCTGGGTT 59.391 55.0 0.00 0.00 0.00 4.11 R
5232 5503 0.100146 GTCCGTGGTCCGACTACATC 59.900 60.0 14.61 1.64 39.56 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 0.179089 CTTCCTCCTCTGCATCCACG 60.179 60.000 0.00 0.00 0.00 4.94
87 88 1.274712 ACAGCTTCCTCTTCCTCCTG 58.725 55.000 0.00 0.00 0.00 3.86
99 100 1.229658 CCTCCTGAGACCCACCCTT 60.230 63.158 0.00 0.00 0.00 3.95
216 230 3.982516 TCTATCTGTTCCCTACTGTGCT 58.017 45.455 0.00 0.00 0.00 4.40
263 277 1.838715 AGTCGAGGAGGTACAGCTCTA 59.161 52.381 8.23 0.00 0.00 2.43
311 333 0.804364 TGCGCTTCACATTTGCTAGG 59.196 50.000 9.73 0.00 0.00 3.02
315 337 2.159653 CGCTTCACATTTGCTAGGTCAC 60.160 50.000 0.00 0.00 0.00 3.67
317 339 3.503748 GCTTCACATTTGCTAGGTCACTT 59.496 43.478 0.00 0.00 0.00 3.16
318 340 4.695455 GCTTCACATTTGCTAGGTCACTTA 59.305 41.667 0.00 0.00 0.00 2.24
319 341 5.163814 GCTTCACATTTGCTAGGTCACTTAG 60.164 44.000 0.00 0.00 0.00 2.18
327 349 3.515502 TGCTAGGTCACTTAGTTCATGCT 59.484 43.478 0.00 0.00 0.00 3.79
330 352 4.464069 AGGTCACTTAGTTCATGCTCTC 57.536 45.455 0.00 0.00 0.00 3.20
341 363 9.376075 CTTAGTTCATGCTCTCTGAAAGATTTA 57.624 33.333 0.00 0.00 45.62 1.40
342 364 7.608308 AGTTCATGCTCTCTGAAAGATTTAC 57.392 36.000 0.00 0.00 45.62 2.01
343 365 7.393216 AGTTCATGCTCTCTGAAAGATTTACT 58.607 34.615 0.00 0.00 45.62 2.24
344 366 8.535335 AGTTCATGCTCTCTGAAAGATTTACTA 58.465 33.333 0.00 0.00 45.62 1.82
345 367 8.599774 GTTCATGCTCTCTGAAAGATTTACTAC 58.400 37.037 0.00 0.00 45.62 2.73
346 368 6.975197 TCATGCTCTCTGAAAGATTTACTACG 59.025 38.462 0.00 0.00 45.62 3.51
347 369 6.268825 TGCTCTCTGAAAGATTTACTACGT 57.731 37.500 0.00 0.00 45.62 3.57
348 370 6.688578 TGCTCTCTGAAAGATTTACTACGTT 58.311 36.000 0.00 0.00 45.62 3.99
349 371 6.586463 TGCTCTCTGAAAGATTTACTACGTTG 59.414 38.462 0.00 0.00 45.62 4.10
350 372 6.035112 GCTCTCTGAAAGATTTACTACGTTGG 59.965 42.308 0.00 0.00 45.62 3.77
351 373 6.989659 TCTCTGAAAGATTTACTACGTTGGT 58.010 36.000 0.00 0.00 45.62 3.67
352 374 8.114331 TCTCTGAAAGATTTACTACGTTGGTA 57.886 34.615 0.00 0.00 45.62 3.25
353 375 8.579006 TCTCTGAAAGATTTACTACGTTGGTAA 58.421 33.333 0.00 1.16 45.62 2.85
354 376 8.524870 TCTGAAAGATTTACTACGTTGGTAAC 57.475 34.615 11.55 4.42 38.67 2.50
355 377 7.599998 TCTGAAAGATTTACTACGTTGGTAACC 59.400 37.037 11.55 8.13 38.67 2.85
356 378 7.215789 TGAAAGATTTACTACGTTGGTAACCA 58.784 34.615 11.55 0.00 0.00 3.67
357 379 7.879160 TGAAAGATTTACTACGTTGGTAACCAT 59.121 33.333 11.55 5.94 31.53 3.55
358 380 8.625786 AAAGATTTACTACGTTGGTAACCATT 57.374 30.769 11.55 6.01 31.53 3.16
359 381 8.625786 AAGATTTACTACGTTGGTAACCATTT 57.374 30.769 11.55 4.56 31.53 2.32
360 382 8.260270 AGATTTACTACGTTGGTAACCATTTC 57.740 34.615 11.55 6.36 31.53 2.17
361 383 8.098912 AGATTTACTACGTTGGTAACCATTTCT 58.901 33.333 11.55 7.81 31.53 2.52
362 384 7.424227 TTTACTACGTTGGTAACCATTTCTG 57.576 36.000 11.55 0.00 31.53 3.02
392 414 4.241681 ACGACTCATTTCTCTTTGCTCTC 58.758 43.478 0.00 0.00 0.00 3.20
515 571 3.716872 AGGATCATAGGTTACCAACTGGG 59.283 47.826 3.51 0.00 44.81 4.45
552 614 4.621747 GCTATGTGGCCTCCATCTATGTAC 60.622 50.000 3.32 0.00 35.28 2.90
553 615 2.047061 TGTGGCCTCCATCTATGTACC 58.953 52.381 3.32 0.00 35.28 3.34
554 616 2.330216 GTGGCCTCCATCTATGTACCT 58.670 52.381 3.32 0.00 35.28 3.08
555 617 2.037772 GTGGCCTCCATCTATGTACCTG 59.962 54.545 3.32 0.00 35.28 4.00
557 619 1.002544 GCCTCCATCTATGTACCTGCC 59.997 57.143 0.00 0.00 0.00 4.85
558 620 2.329267 CCTCCATCTATGTACCTGCCA 58.671 52.381 0.00 0.00 0.00 4.92
559 621 2.909006 CCTCCATCTATGTACCTGCCAT 59.091 50.000 0.00 0.00 0.00 4.40
560 622 4.096681 CCTCCATCTATGTACCTGCCATA 58.903 47.826 0.00 0.00 0.00 2.74
608 676 0.810648 CCGCAGGCACATGTGTTTAT 59.189 50.000 26.01 7.92 46.14 1.40
647 715 1.314730 TGGTCTTCGCCACCTTTTTC 58.685 50.000 0.00 0.00 34.66 2.29
651 719 3.566742 GGTCTTCGCCACCTTTTTCTTTA 59.433 43.478 0.00 0.00 0.00 1.85
655 723 6.700081 GTCTTCGCCACCTTTTTCTTTATTTT 59.300 34.615 0.00 0.00 0.00 1.82
656 724 6.699642 TCTTCGCCACCTTTTTCTTTATTTTG 59.300 34.615 0.00 0.00 0.00 2.44
657 725 5.908341 TCGCCACCTTTTTCTTTATTTTGT 58.092 33.333 0.00 0.00 0.00 2.83
709 778 4.966168 AGTAAAAGTCAAATTGGGTTGGGT 59.034 37.500 0.00 0.00 0.00 4.51
744 813 6.906157 AGGCTGGTCATTTTATATTGATGG 57.094 37.500 0.00 0.00 0.00 3.51
851 920 3.205784 AGATGATAAAGGCTGCCTCAC 57.794 47.619 23.61 13.57 30.89 3.51
859 928 0.833287 AGGCTGCCTCACGATACAAT 59.167 50.000 17.22 0.00 0.00 2.71
863 932 2.738846 GCTGCCTCACGATACAATATGG 59.261 50.000 0.00 0.00 0.00 2.74
864 933 2.738846 CTGCCTCACGATACAATATGGC 59.261 50.000 0.00 0.00 39.53 4.40
892 962 6.993878 AGAAGATGTTTTACGTCATCGAATG 58.006 36.000 8.74 0.00 43.34 2.67
893 963 5.718649 AGATGTTTTACGTCATCGAATGG 57.281 39.130 8.74 0.00 43.34 3.16
910 980 3.825143 ATGGCCAAATTCATACCAAGC 57.175 42.857 10.96 0.00 33.30 4.01
942 1012 0.889994 AAGCCTGATTTCATTGCGCA 59.110 45.000 5.66 5.66 0.00 6.09
1074 1144 3.457263 TATGAGCTCGGCCGCACA 61.457 61.111 23.51 17.25 35.09 4.57
1155 1225 4.818546 CCTGTTGCTATCAAAATCCTCGAT 59.181 41.667 0.00 0.00 33.37 3.59
1224 1295 4.641989 ACACAATTCCCTCATATGACTTGC 59.358 41.667 0.00 0.00 0.00 4.01
1246 1317 5.294306 TGCGCTAGTTTCTTCATATTCCTTG 59.706 40.000 9.73 0.00 0.00 3.61
1248 1319 6.709643 CGCTAGTTTCTTCATATTCCTTGTG 58.290 40.000 0.00 0.00 0.00 3.33
1302 1376 7.540400 TCATAAGATGCACGTGGTAAAATTTTG 59.460 33.333 18.88 0.00 0.00 2.44
1375 1521 2.622942 CAGTAACCAAGCCAGCAAAAGA 59.377 45.455 0.00 0.00 0.00 2.52
1384 1530 5.349543 CCAAGCCAGCAAAAGAATTATGTTC 59.650 40.000 0.00 0.00 0.00 3.18
1623 1800 6.657541 TCTTACCCACATAGTGATTTTCCAAC 59.342 38.462 0.00 0.00 35.23 3.77
1648 1826 9.642343 ACTGAAGTCATATCACCAACTAGTATA 57.358 33.333 0.00 0.00 0.00 1.47
1673 1851 7.817418 TTTTCCTAGTATCTTGTGCAGTTTT 57.183 32.000 0.00 0.00 0.00 2.43
1704 1882 7.487484 TGATGTCTGAACTTTGTGCAAAATTA 58.513 30.769 0.00 0.00 0.00 1.40
1723 1901 7.721286 AAATTAAACACGAAATTCAATGCCA 57.279 28.000 0.00 0.00 0.00 4.92
1724 1902 7.721286 AATTAAACACGAAATTCAATGCCAA 57.279 28.000 0.00 0.00 0.00 4.52
1798 1976 9.958180 TCCATGTCTTCAGTTCTATTTAATTGA 57.042 29.630 0.00 0.00 0.00 2.57
1840 2020 1.536149 CGAGTTCGAAGTTCTAGCCG 58.464 55.000 6.99 1.04 43.02 5.52
2061 2244 6.128391 CGAGGTAAAGTCCAAAAATCAATCGA 60.128 38.462 0.00 0.00 0.00 3.59
2121 2304 2.336945 TATCCATGGCTGCAGTCTTG 57.663 50.000 23.47 23.47 0.00 3.02
2173 2358 2.026262 TCAGGTGATGGGAAGTAAAGCC 60.026 50.000 0.00 0.00 0.00 4.35
2182 2367 6.269769 TGATGGGAAGTAAAGCCAGAATTTTT 59.730 34.615 0.00 0.00 0.00 1.94
2280 2465 4.082571 GCAATTGCTGAGGTTGTATTGTCT 60.083 41.667 23.21 0.00 38.21 3.41
2407 2592 3.815401 ACTTTCAACAGCTGATAAACGCT 59.185 39.130 23.35 0.00 36.83 5.07
2534 2719 8.714179 CAAGTACGGTAAAGTGACAAAATGATA 58.286 33.333 0.00 0.00 0.00 2.15
2585 2770 1.552578 TGCTTGATGCTGCTGGAAAT 58.447 45.000 0.00 0.00 43.37 2.17
2647 2832 7.178628 TGAGCAAGTGAAGGTATTCTTACTACT 59.821 37.037 0.00 0.00 35.50 2.57
2730 2918 8.394971 TGTGTTGATTCTCACTGTTATTGAAT 57.605 30.769 11.53 0.00 35.82 2.57
2741 2929 7.796838 TCACTGTTATTGAATTTCTTCGACTG 58.203 34.615 0.00 0.16 33.86 3.51
2752 2940 2.447443 TCTTCGACTGTACAGGCTGAT 58.553 47.619 25.95 4.81 33.16 2.90
2866 3056 9.877178 AATCCACTAGAACTATTGTCTAACTTG 57.123 33.333 0.00 0.00 0.00 3.16
3295 3486 6.284459 TCCTTTCAAAAGAGAGTCAGACTTC 58.716 40.000 4.05 4.75 38.28 3.01
3345 3537 7.493971 CCAGTAGTCCTAATTTCATTCTCAGTG 59.506 40.741 0.00 0.00 0.00 3.66
3749 3941 6.688073 AGGAGGTCAGAACTGAAAATTCTA 57.312 37.500 6.08 0.00 41.85 2.10
3771 3963 9.955208 TTCTAAAATATTTATGCTGCAGACATG 57.045 29.630 24.74 10.61 0.00 3.21
3786 3978 4.573900 CAGACATGCATTATACTCCCTCC 58.426 47.826 0.00 0.00 0.00 4.30
3787 3979 4.040829 CAGACATGCATTATACTCCCTCCA 59.959 45.833 0.00 0.00 0.00 3.86
3788 3980 4.848660 AGACATGCATTATACTCCCTCCAT 59.151 41.667 0.00 0.00 0.00 3.41
3789 3981 5.311649 AGACATGCATTATACTCCCTCCATT 59.688 40.000 0.00 0.00 0.00 3.16
3790 3982 5.564550 ACATGCATTATACTCCCTCCATTC 58.435 41.667 0.00 0.00 0.00 2.67
3791 3983 4.640771 TGCATTATACTCCCTCCATTCC 57.359 45.455 0.00 0.00 0.00 3.01
3792 3984 4.242811 TGCATTATACTCCCTCCATTCCT 58.757 43.478 0.00 0.00 0.00 3.36
3793 3985 5.411493 TGCATTATACTCCCTCCATTCCTA 58.589 41.667 0.00 0.00 0.00 2.94
3794 3986 5.849475 TGCATTATACTCCCTCCATTCCTAA 59.151 40.000 0.00 0.00 0.00 2.69
3795 3987 6.331572 TGCATTATACTCCCTCCATTCCTAAA 59.668 38.462 0.00 0.00 0.00 1.85
3796 3988 7.018550 TGCATTATACTCCCTCCATTCCTAAAT 59.981 37.037 0.00 0.00 0.00 1.40
3797 3989 8.548877 GCATTATACTCCCTCCATTCCTAAATA 58.451 37.037 0.00 0.00 0.00 1.40
3802 3994 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
3803 3995 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
3804 3996 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
3805 3997 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
3806 3998 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
3807 3999 8.981659 CCCTCCATTCCTAAATATTTGTCTTTT 58.018 33.333 11.05 0.00 0.00 2.27
3825 4017 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
3826 4018 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
3838 4030 4.603052 TGGACTACCACACACGGA 57.397 55.556 0.00 0.00 41.77 4.69
3839 4031 3.060828 TGGACTACCACACACGGAT 57.939 52.632 0.00 0.00 41.77 4.18
3840 4032 0.606096 TGGACTACCACACACGGATG 59.394 55.000 0.00 0.00 41.77 3.51
3841 4033 0.606604 GGACTACCACACACGGATGT 59.393 55.000 0.00 0.00 36.29 3.06
3842 4034 1.820519 GGACTACCACACACGGATGTA 59.179 52.381 0.00 0.00 34.91 2.29
3843 4035 2.429610 GGACTACCACACACGGATGTAT 59.570 50.000 0.00 0.00 34.91 2.29
3844 4036 3.633525 GGACTACCACACACGGATGTATA 59.366 47.826 0.00 0.00 34.91 1.47
3845 4037 4.280174 GGACTACCACACACGGATGTATAT 59.720 45.833 0.00 0.00 34.91 0.86
3846 4038 5.474532 GGACTACCACACACGGATGTATATA 59.525 44.000 0.00 0.00 34.91 0.86
3847 4039 6.349115 GGACTACCACACACGGATGTATATAG 60.349 46.154 0.00 0.00 34.91 1.31
3848 4040 6.301486 ACTACCACACACGGATGTATATAGA 58.699 40.000 10.23 0.00 36.72 1.98
3849 4041 5.449107 ACCACACACGGATGTATATAGAC 57.551 43.478 0.00 0.00 36.72 2.59
3850 4042 4.891168 ACCACACACGGATGTATATAGACA 59.109 41.667 2.07 2.07 36.72 3.41
3851 4043 5.538813 ACCACACACGGATGTATATAGACAT 59.461 40.000 12.70 12.70 42.82 3.06
3852 4044 6.717997 ACCACACACGGATGTATATAGACATA 59.282 38.462 12.82 0.00 40.18 2.29
3853 4045 7.396339 ACCACACACGGATGTATATAGACATAT 59.604 37.037 12.82 0.00 40.18 1.78
3854 4046 8.251026 CCACACACGGATGTATATAGACATATT 58.749 37.037 12.82 0.00 40.18 1.28
3855 4047 9.639601 CACACACGGATGTATATAGACATATTT 57.360 33.333 12.82 0.00 40.18 1.40
3883 4075 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
3884 4076 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
3885 4077 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
3886 4078 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
3887 4079 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
3888 4080 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
3889 4081 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
3890 4082 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
3891 4083 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
3892 4084 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
3893 4085 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
3894 4086 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
3895 4087 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
3896 4088 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
3897 4089 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
3898 4090 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
3899 4091 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
3900 4092 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
3901 4093 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
3902 4094 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
3903 4095 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
3904 4096 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
3905 4097 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
3906 4098 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
3907 4099 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
3908 4100 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
3909 4101 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3910 4102 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3911 4103 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
3912 4104 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
3913 4105 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
3914 4106 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
3915 4107 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
3916 4108 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
3917 4109 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
3918 4110 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
3919 4111 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
3920 4112 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
3933 4125 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3934 4126 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3935 4127 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3936 4128 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3937 4129 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3938 4130 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3939 4131 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3960 4152 6.929606 GGGAGTATGTCTTATTATGTGTGGTC 59.070 42.308 0.00 0.00 0.00 4.02
4208 4402 9.403583 TGTCTGTATATGTACACACATCTTCTA 57.596 33.333 6.62 0.00 44.42 2.10
4551 4746 1.570501 AGCATCCCCTCTTTGCCATTA 59.429 47.619 0.00 0.00 37.07 1.90
4580 4777 7.202016 TCTCTGCGAATTTTAACTGTCAAAT 57.798 32.000 0.00 0.00 0.00 2.32
4646 4844 6.717084 TGAAACAGTTCTACAGATCTCTCTCA 59.283 38.462 0.00 0.00 34.60 3.27
4705 4903 3.097614 AGGTAGAAGATAACAGCACCGT 58.902 45.455 0.00 0.00 0.00 4.83
4763 4966 3.723681 AGTTCATATGTGGGATGGATGGT 59.276 43.478 1.90 0.00 0.00 3.55
4780 4983 3.965258 TGGGTGTTGGCTGCGGAT 61.965 61.111 0.00 0.00 0.00 4.18
4809 5012 1.456165 GCAGACCGAGTTCTTTCGTTC 59.544 52.381 0.00 0.00 38.88 3.95
4826 5035 4.956793 TCGTTCGTTTGTTGATGATGATG 58.043 39.130 0.00 0.00 0.00 3.07
4827 5036 4.688413 TCGTTCGTTTGTTGATGATGATGA 59.312 37.500 0.00 0.00 0.00 2.92
4828 5037 4.783036 CGTTCGTTTGTTGATGATGATGAC 59.217 41.667 0.00 0.00 0.00 3.06
4860 5069 3.430862 GATGAAACAGCGGGCGCA 61.431 61.111 10.83 0.00 44.88 6.09
4906 5115 3.559238 ATGGCTTCGTTAGTTTGCTTG 57.441 42.857 0.00 0.00 0.00 4.01
4907 5116 1.001815 TGGCTTCGTTAGTTTGCTTGC 60.002 47.619 0.00 0.00 0.00 4.01
4909 5118 2.310577 GCTTCGTTAGTTTGCTTGCTG 58.689 47.619 0.00 0.00 0.00 4.41
4910 5119 2.032030 GCTTCGTTAGTTTGCTTGCTGA 60.032 45.455 0.00 0.00 0.00 4.26
4941 5152 2.483889 GGTCCAGAGGGAGATTAAAGCG 60.484 54.545 0.00 0.00 46.12 4.68
4964 5175 3.598678 GCGAAAGGCCGTATTGTTC 57.401 52.632 0.00 0.00 34.80 3.18
4978 5189 7.225931 GGCCGTATTGTTCTAAGATTGTATTGA 59.774 37.037 0.00 0.00 0.00 2.57
5000 5211 6.136857 TGATAGGAGGTTATACTGAACAGCT 58.863 40.000 1.46 0.00 0.00 4.24
5022 5233 5.230726 GCTCAATGTGTTGAACTTTGTTCTG 59.769 40.000 11.06 1.06 43.39 3.02
5067 5284 3.196300 AGTACCTATAGCCGGGGAGATA 58.804 50.000 2.18 0.00 0.00 1.98
5070 5287 2.585900 ACCTATAGCCGGGGAGATATCA 59.414 50.000 2.18 0.00 0.00 2.15
5071 5288 3.207777 ACCTATAGCCGGGGAGATATCAT 59.792 47.826 2.18 0.00 0.00 2.45
5072 5289 4.419200 ACCTATAGCCGGGGAGATATCATA 59.581 45.833 2.18 0.00 0.00 2.15
5073 5290 5.076598 ACCTATAGCCGGGGAGATATCATAT 59.923 44.000 2.18 0.00 0.00 1.78
5074 5291 5.654650 CCTATAGCCGGGGAGATATCATATC 59.345 48.000 2.18 0.00 0.00 1.63
5075 5292 3.697190 AGCCGGGGAGATATCATATCT 57.303 47.619 6.91 6.91 0.00 1.98
5076 5293 3.571590 AGCCGGGGAGATATCATATCTC 58.428 50.000 22.25 22.25 42.78 2.75
5078 5295 3.964031 GCCGGGGAGATATCATATCTCTT 59.036 47.826 26.99 0.07 43.00 2.85
5079 5296 5.103473 AGCCGGGGAGATATCATATCTCTTA 60.103 44.000 26.99 0.00 43.00 2.10
5080 5297 5.242838 GCCGGGGAGATATCATATCTCTTAG 59.757 48.000 26.99 19.14 43.00 2.18
5081 5298 6.369629 CCGGGGAGATATCATATCTCTTAGT 58.630 44.000 26.99 0.00 43.00 2.24
5082 5299 6.488683 CCGGGGAGATATCATATCTCTTAGTC 59.511 46.154 26.99 14.24 43.00 2.59
5083 5300 7.287061 CGGGGAGATATCATATCTCTTAGTCT 58.713 42.308 26.99 0.00 43.00 3.24
5084 5301 7.228507 CGGGGAGATATCATATCTCTTAGTCTG 59.771 44.444 26.99 15.60 43.00 3.51
5085 5302 8.058847 GGGGAGATATCATATCTCTTAGTCTGT 58.941 40.741 26.99 0.00 43.00 3.41
5156 5373 0.249868 TGCGTGTGTGAAGGAAGGAG 60.250 55.000 0.00 0.00 0.00 3.69
5210 5481 0.976641 ACCGATGTGAGTGTGGATGT 59.023 50.000 0.00 0.00 0.00 3.06
5232 5503 4.488126 TCTCCAAATTGCGAACAGAAAG 57.512 40.909 0.00 0.00 0.00 2.62
5292 5563 0.893447 AAGATGAAAGCCTGGCAAGC 59.107 50.000 22.65 9.52 0.00 4.01
5304 5575 3.797546 GCAAGCTGTGAGCCGCTC 61.798 66.667 13.81 13.81 43.77 5.03
5329 5600 1.992519 ATGCTGCCATGTCTCCCTCC 61.993 60.000 0.00 0.00 0.00 4.30
5332 5603 4.554036 GCCATGTCTCCCTCCGCC 62.554 72.222 0.00 0.00 0.00 6.13
5333 5604 4.227134 CCATGTCTCCCTCCGCCG 62.227 72.222 0.00 0.00 0.00 6.46
5334 5605 4.899239 CATGTCTCCCTCCGCCGC 62.899 72.222 0.00 0.00 0.00 6.53
5365 5636 1.792941 GCTTTGGCTTGCTCTCTCG 59.207 57.895 0.00 0.00 35.22 4.04
5366 5637 0.952984 GCTTTGGCTTGCTCTCTCGT 60.953 55.000 0.00 0.00 35.22 4.18
5367 5638 0.795085 CTTTGGCTTGCTCTCTCGTG 59.205 55.000 0.00 0.00 0.00 4.35
5368 5639 1.230635 TTTGGCTTGCTCTCTCGTGC 61.231 55.000 0.00 0.00 0.00 5.34
5369 5640 2.817396 GGCTTGCTCTCTCGTGCC 60.817 66.667 0.00 0.00 0.00 5.01
5370 5641 3.184683 GCTTGCTCTCTCGTGCCG 61.185 66.667 0.00 0.00 0.00 5.69
5371 5642 3.184683 CTTGCTCTCTCGTGCCGC 61.185 66.667 0.00 0.00 0.00 6.53
5404 5675 3.479269 CGCACTTCGGAGTTCGGC 61.479 66.667 8.12 1.02 38.59 5.54
5405 5676 3.119096 GCACTTCGGAGTTCGGCC 61.119 66.667 0.00 0.00 39.77 6.13
5406 5677 2.434359 CACTTCGGAGTTCGGCCC 60.434 66.667 0.00 0.00 39.77 5.80
5407 5678 3.703127 ACTTCGGAGTTCGGCCCC 61.703 66.667 0.00 0.00 39.77 5.80
5408 5679 4.814294 CTTCGGAGTTCGGCCCCG 62.814 72.222 10.81 10.81 44.22 5.73
5413 5684 4.754667 GAGTTCGGCCCCGGTGAC 62.755 72.222 6.90 0.00 40.25 3.67
5435 5706 4.179579 GCGCTGGCATTTCCCGAC 62.180 66.667 0.00 0.00 39.62 4.79
5436 5707 3.508840 CGCTGGCATTTCCCGACC 61.509 66.667 0.00 0.00 0.00 4.79
5437 5708 3.140814 GCTGGCATTTCCCGACCC 61.141 66.667 0.00 0.00 0.00 4.46
5438 5709 2.824041 CTGGCATTTCCCGACCCG 60.824 66.667 0.00 0.00 0.00 5.28
5442 5713 4.109675 CATTTCCCGACCCGGCCT 62.110 66.667 0.00 0.00 46.86 5.19
5443 5714 3.335729 ATTTCCCGACCCGGCCTT 61.336 61.111 0.00 0.00 46.86 4.35
5444 5715 3.638592 ATTTCCCGACCCGGCCTTG 62.639 63.158 0.00 0.00 46.86 3.61
5472 5743 3.862124 CCAGACGGCTTTGACTCG 58.138 61.111 0.00 0.00 0.00 4.18
5473 5744 2.383527 CCAGACGGCTTTGACTCGC 61.384 63.158 0.00 0.00 0.00 5.03
5474 5745 2.048127 AGACGGCTTTGACTCGCC 60.048 61.111 0.00 0.00 42.86 5.54
5497 5768 4.473520 CCGCATCTGGGTCGGCTT 62.474 66.667 0.00 0.00 36.53 4.35
5498 5769 2.499205 CGCATCTGGGTCGGCTTA 59.501 61.111 0.00 0.00 0.00 3.09
5499 5770 1.153449 CGCATCTGGGTCGGCTTAA 60.153 57.895 0.00 0.00 0.00 1.85
5500 5771 1.429148 CGCATCTGGGTCGGCTTAAC 61.429 60.000 0.00 0.00 0.00 2.01
5501 5772 0.107654 GCATCTGGGTCGGCTTAACT 60.108 55.000 0.00 0.00 0.00 2.24
5502 5773 1.941325 CATCTGGGTCGGCTTAACTC 58.059 55.000 0.00 0.00 0.00 3.01
5503 5774 0.460311 ATCTGGGTCGGCTTAACTCG 59.540 55.000 0.00 0.00 0.00 4.18
5504 5775 1.153628 CTGGGTCGGCTTAACTCGG 60.154 63.158 0.00 0.00 0.00 4.63
5505 5776 1.885163 CTGGGTCGGCTTAACTCGGT 61.885 60.000 0.00 0.00 0.00 4.69
5506 5777 1.294459 GGGTCGGCTTAACTCGGTT 59.706 57.895 0.00 0.00 0.00 4.44
5507 5778 0.321034 GGGTCGGCTTAACTCGGTTT 60.321 55.000 0.00 0.00 0.00 3.27
5508 5779 1.516161 GGTCGGCTTAACTCGGTTTT 58.484 50.000 0.00 0.00 0.00 2.43
5509 5780 1.875514 GGTCGGCTTAACTCGGTTTTT 59.124 47.619 0.00 0.00 0.00 1.94
5531 5802 4.759516 TTTTTAGGGCAAGCTTAACTCG 57.240 40.909 0.00 0.00 0.00 4.18
5532 5803 2.396590 TTAGGGCAAGCTTAACTCGG 57.603 50.000 0.00 0.00 0.00 4.63
5533 5804 0.539986 TAGGGCAAGCTTAACTCGGG 59.460 55.000 0.00 0.00 0.00 5.14
5534 5805 2.407428 GGGCAAGCTTAACTCGGGC 61.407 63.158 0.00 0.00 0.00 6.13
5535 5806 1.377333 GGCAAGCTTAACTCGGGCT 60.377 57.895 0.00 0.00 37.99 5.19
5536 5807 1.648467 GGCAAGCTTAACTCGGGCTG 61.648 60.000 0.00 0.00 36.37 4.85
5537 5808 1.648467 GCAAGCTTAACTCGGGCTGG 61.648 60.000 0.00 0.00 36.37 4.85
5538 5809 1.026718 CAAGCTTAACTCGGGCTGGG 61.027 60.000 0.00 0.00 36.37 4.45
5539 5810 2.821679 AAGCTTAACTCGGGCTGGGC 62.822 60.000 0.00 0.00 36.37 5.36
5540 5811 2.668632 CTTAACTCGGGCTGGGCA 59.331 61.111 0.00 0.00 0.00 5.36
5541 5812 1.002624 CTTAACTCGGGCTGGGCAA 60.003 57.895 0.00 0.00 0.00 4.52
5542 5813 0.608035 CTTAACTCGGGCTGGGCAAA 60.608 55.000 0.00 0.00 0.00 3.68
5543 5814 0.608035 TTAACTCGGGCTGGGCAAAG 60.608 55.000 0.00 0.00 0.00 2.77
5563 5834 3.258225 CTACGCGAGGAGTCCAATG 57.742 57.895 15.93 1.15 37.25 2.82
5564 5835 0.738975 CTACGCGAGGAGTCCAATGA 59.261 55.000 15.93 0.00 37.25 2.57
5565 5836 0.738975 TACGCGAGGAGTCCAATGAG 59.261 55.000 15.93 4.77 0.00 2.90
5566 5837 0.965866 ACGCGAGGAGTCCAATGAGA 60.966 55.000 15.93 0.00 0.00 3.27
5567 5838 0.387202 CGCGAGGAGTCCAATGAGAT 59.613 55.000 12.86 0.00 0.00 2.75
5568 5839 1.863267 GCGAGGAGTCCAATGAGATG 58.137 55.000 12.86 0.00 0.00 2.90
5569 5840 1.410517 GCGAGGAGTCCAATGAGATGA 59.589 52.381 12.86 0.00 0.00 2.92
5570 5841 2.036992 GCGAGGAGTCCAATGAGATGAT 59.963 50.000 12.86 0.00 0.00 2.45
5571 5842 3.860378 GCGAGGAGTCCAATGAGATGATC 60.860 52.174 12.86 0.00 0.00 2.92
5572 5843 3.320256 CGAGGAGTCCAATGAGATGATCA 59.680 47.826 12.86 0.00 43.70 2.92
5587 5858 5.622180 AGATGATCATCTCATTGGACTTGG 58.378 41.667 28.92 0.00 44.37 3.61
5588 5859 4.160642 TGATCATCTCATTGGACTTGGG 57.839 45.455 0.00 0.00 0.00 4.12
5589 5860 3.117776 TGATCATCTCATTGGACTTGGGG 60.118 47.826 0.00 0.00 0.00 4.96
5590 5861 1.064463 TCATCTCATTGGACTTGGGGC 60.064 52.381 0.00 0.00 0.00 5.80
5591 5862 0.107017 ATCTCATTGGACTTGGGGCG 60.107 55.000 0.00 0.00 0.00 6.13
5592 5863 1.750399 CTCATTGGACTTGGGGCGG 60.750 63.158 0.00 0.00 0.00 6.13
5593 5864 2.755469 CATTGGACTTGGGGCGGG 60.755 66.667 0.00 0.00 0.00 6.13
5594 5865 2.938798 ATTGGACTTGGGGCGGGA 60.939 61.111 0.00 0.00 0.00 5.14
5595 5866 2.316586 ATTGGACTTGGGGCGGGAT 61.317 57.895 0.00 0.00 0.00 3.85
5596 5867 2.284515 ATTGGACTTGGGGCGGGATC 62.285 60.000 0.00 0.00 0.00 3.36
5597 5868 4.191015 GGACTTGGGGCGGGATCC 62.191 72.222 1.92 1.92 0.00 3.36
5598 5869 3.090532 GACTTGGGGCGGGATCCT 61.091 66.667 12.58 0.00 0.00 3.24
5599 5870 3.090532 ACTTGGGGCGGGATCCTC 61.091 66.667 12.58 3.79 0.00 3.71
5600 5871 2.770048 CTTGGGGCGGGATCCTCT 60.770 66.667 12.58 0.00 0.00 3.69
5601 5872 2.768344 TTGGGGCGGGATCCTCTC 60.768 66.667 12.58 3.71 0.00 3.20
5602 5873 3.634157 TTGGGGCGGGATCCTCTCA 62.634 63.158 12.58 5.25 0.00 3.27
5603 5874 3.551407 GGGGCGGGATCCTCTCAC 61.551 72.222 12.58 1.86 0.00 3.51
5608 5879 3.097461 CGGGATCCTCTCACGTACT 57.903 57.895 12.58 0.00 45.96 2.73
5609 5880 0.945813 CGGGATCCTCTCACGTACTC 59.054 60.000 12.58 0.00 45.96 2.59
5610 5881 1.746171 CGGGATCCTCTCACGTACTCA 60.746 57.143 12.58 0.00 45.96 3.41
5611 5882 2.376109 GGGATCCTCTCACGTACTCAA 58.624 52.381 12.58 0.00 0.00 3.02
5612 5883 2.359531 GGGATCCTCTCACGTACTCAAG 59.640 54.545 12.58 0.00 0.00 3.02
5613 5884 2.359531 GGATCCTCTCACGTACTCAAGG 59.640 54.545 3.84 0.00 0.00 3.61
5614 5885 1.835494 TCCTCTCACGTACTCAAGGG 58.165 55.000 0.00 0.00 0.00 3.95
5615 5886 1.353358 TCCTCTCACGTACTCAAGGGA 59.647 52.381 0.00 0.00 0.00 4.20
5616 5887 2.168496 CCTCTCACGTACTCAAGGGAA 58.832 52.381 0.00 0.00 0.00 3.97
5617 5888 2.164624 CCTCTCACGTACTCAAGGGAAG 59.835 54.545 0.00 0.00 0.00 3.46
5618 5889 2.820787 CTCTCACGTACTCAAGGGAAGT 59.179 50.000 0.00 0.00 0.00 3.01
5619 5890 2.818432 TCTCACGTACTCAAGGGAAGTC 59.182 50.000 0.00 0.00 0.00 3.01
5620 5891 2.557056 CTCACGTACTCAAGGGAAGTCA 59.443 50.000 0.00 0.00 0.00 3.41
5621 5892 2.557056 TCACGTACTCAAGGGAAGTCAG 59.443 50.000 0.00 0.00 0.00 3.51
5622 5893 1.893801 ACGTACTCAAGGGAAGTCAGG 59.106 52.381 0.00 0.00 0.00 3.86
5623 5894 1.204941 CGTACTCAAGGGAAGTCAGGG 59.795 57.143 0.00 0.00 0.00 4.45
5624 5895 2.537143 GTACTCAAGGGAAGTCAGGGA 58.463 52.381 0.00 0.00 0.00 4.20
5625 5896 1.650528 ACTCAAGGGAAGTCAGGGAG 58.349 55.000 0.00 0.00 0.00 4.30
5626 5897 0.251634 CTCAAGGGAAGTCAGGGAGC 59.748 60.000 0.00 0.00 0.00 4.70
5627 5898 0.178891 TCAAGGGAAGTCAGGGAGCT 60.179 55.000 0.00 0.00 0.00 4.09
5628 5899 1.078823 TCAAGGGAAGTCAGGGAGCTA 59.921 52.381 0.00 0.00 0.00 3.32
5629 5900 1.484240 CAAGGGAAGTCAGGGAGCTAG 59.516 57.143 0.00 0.00 0.00 3.42
5630 5901 1.011595 AGGGAAGTCAGGGAGCTAGA 58.988 55.000 0.00 0.00 0.00 2.43
5631 5902 1.063266 AGGGAAGTCAGGGAGCTAGAG 60.063 57.143 0.00 0.00 0.00 2.43
5632 5903 1.342574 GGGAAGTCAGGGAGCTAGAGT 60.343 57.143 0.00 0.00 0.00 3.24
5633 5904 2.091775 GGGAAGTCAGGGAGCTAGAGTA 60.092 54.545 0.00 0.00 0.00 2.59
5634 5905 3.437344 GGGAAGTCAGGGAGCTAGAGTAT 60.437 52.174 0.00 0.00 0.00 2.12
5635 5906 4.219919 GGAAGTCAGGGAGCTAGAGTATT 58.780 47.826 0.00 0.00 0.00 1.89
5636 5907 4.279922 GGAAGTCAGGGAGCTAGAGTATTC 59.720 50.000 0.00 0.00 0.00 1.75
5637 5908 4.806952 AGTCAGGGAGCTAGAGTATTCT 57.193 45.455 0.00 0.00 37.46 2.40
5638 5909 5.137412 AGTCAGGGAGCTAGAGTATTCTT 57.863 43.478 0.00 0.00 34.79 2.52
5639 5910 5.137551 AGTCAGGGAGCTAGAGTATTCTTC 58.862 45.833 0.00 0.00 34.79 2.87
5640 5911 5.103686 AGTCAGGGAGCTAGAGTATTCTTCT 60.104 44.000 0.00 0.00 34.79 2.85
5641 5912 5.240844 GTCAGGGAGCTAGAGTATTCTTCTC 59.759 48.000 0.00 1.42 34.79 2.87
5642 5913 5.133660 TCAGGGAGCTAGAGTATTCTTCTCT 59.866 44.000 13.19 0.00 43.51 3.10
5643 5914 6.330514 TCAGGGAGCTAGAGTATTCTTCTCTA 59.669 42.308 13.19 0.00 41.66 2.43
5644 5915 6.430000 CAGGGAGCTAGAGTATTCTTCTCTAC 59.570 46.154 13.19 9.03 41.66 2.59
5645 5916 6.331837 AGGGAGCTAGAGTATTCTTCTCTACT 59.668 42.308 13.19 10.38 41.66 2.57
5646 5917 7.514820 AGGGAGCTAGAGTATTCTTCTCTACTA 59.485 40.741 13.19 0.00 41.66 1.82
5647 5918 8.326529 GGGAGCTAGAGTATTCTTCTCTACTAT 58.673 40.741 13.19 0.00 41.66 2.12
5648 5919 9.734984 GGAGCTAGAGTATTCTTCTCTACTATT 57.265 37.037 13.19 0.00 41.66 1.73
5663 5934 8.699283 TCTCTACTATTTAAAAGAAACGGAGC 57.301 34.615 0.00 0.00 0.00 4.70
5664 5935 7.487189 TCTCTACTATTTAAAAGAAACGGAGCG 59.513 37.037 0.00 0.00 0.00 5.03
5665 5936 7.092716 TCTACTATTTAAAAGAAACGGAGCGT 58.907 34.615 0.00 0.00 43.97 5.07
5674 5945 3.633951 ACGGAGCGTTTCGTTTCC 58.366 55.556 0.00 0.00 36.35 3.13
5675 5946 1.957695 ACGGAGCGTTTCGTTTCCC 60.958 57.895 0.00 0.00 36.35 3.97
5676 5947 1.957186 CGGAGCGTTTCGTTTCCCA 60.957 57.895 0.00 0.00 32.27 4.37
5677 5948 1.296056 CGGAGCGTTTCGTTTCCCAT 61.296 55.000 0.00 0.00 32.27 4.00
5678 5949 0.446616 GGAGCGTTTCGTTTCCCATC 59.553 55.000 0.00 0.00 30.67 3.51
5679 5950 1.439679 GAGCGTTTCGTTTCCCATCT 58.560 50.000 0.00 0.00 0.00 2.90
5680 5951 1.804748 GAGCGTTTCGTTTCCCATCTT 59.195 47.619 0.00 0.00 0.00 2.40
5681 5952 2.997986 GAGCGTTTCGTTTCCCATCTTA 59.002 45.455 0.00 0.00 0.00 2.10
5682 5953 2.740447 AGCGTTTCGTTTCCCATCTTAC 59.260 45.455 0.00 0.00 0.00 2.34
5683 5954 2.473376 GCGTTTCGTTTCCCATCTTACG 60.473 50.000 0.00 0.00 35.46 3.18
5684 5955 2.733026 CGTTTCGTTTCCCATCTTACGT 59.267 45.455 0.00 0.00 35.63 3.57
5685 5956 3.181537 CGTTTCGTTTCCCATCTTACGTC 60.182 47.826 0.00 0.00 35.63 4.34
5686 5957 3.663995 TTCGTTTCCCATCTTACGTCA 57.336 42.857 0.00 0.00 35.63 4.35
5687 5958 3.663995 TCGTTTCCCATCTTACGTCAA 57.336 42.857 0.00 0.00 35.63 3.18
5688 5959 3.992643 TCGTTTCCCATCTTACGTCAAA 58.007 40.909 0.00 0.00 35.63 2.69
5689 5960 3.742369 TCGTTTCCCATCTTACGTCAAAC 59.258 43.478 0.00 0.00 35.63 2.93
5706 5977 4.493747 CGTCCTTCGTCCGCCTCC 62.494 72.222 0.00 0.00 34.52 4.30
5707 5978 4.144703 GTCCTTCGTCCGCCTCCC 62.145 72.222 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
4 5 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
7 8 0.871024 ATAAGGAGGGAGGGAGGGAG 59.129 60.000 0.00 0.00 0.00 4.30
8 9 1.340502 AATAAGGAGGGAGGGAGGGA 58.659 55.000 0.00 0.00 0.00 4.20
9 10 2.214364 AAATAAGGAGGGAGGGAGGG 57.786 55.000 0.00 0.00 0.00 4.30
10 11 2.640332 GCTAAATAAGGAGGGAGGGAGG 59.360 54.545 0.00 0.00 0.00 4.30
11 12 3.071747 GTGCTAAATAAGGAGGGAGGGAG 59.928 52.174 0.00 0.00 0.00 4.30
64 65 0.037447 AGGAAGAGGAAGCTGTTGCC 59.963 55.000 0.00 0.00 40.80 4.52
87 88 1.817209 CTAGCGAAGGGTGGGTCTC 59.183 63.158 0.00 0.00 0.00 3.36
216 230 4.569966 ACAAGAAATGCAAAATTCGCACAA 59.430 33.333 4.75 0.00 43.35 3.33
311 333 5.065704 TCAGAGAGCATGAACTAAGTGAC 57.934 43.478 0.00 0.00 0.00 3.67
315 337 7.846644 AATCTTTCAGAGAGCATGAACTAAG 57.153 36.000 0.00 0.00 37.93 2.18
317 339 8.535335 AGTAAATCTTTCAGAGAGCATGAACTA 58.465 33.333 0.00 0.00 37.93 2.24
318 340 7.393216 AGTAAATCTTTCAGAGAGCATGAACT 58.607 34.615 0.00 0.00 37.93 3.01
319 341 7.608308 AGTAAATCTTTCAGAGAGCATGAAC 57.392 36.000 0.00 0.00 37.93 3.18
327 349 6.989659 ACCAACGTAGTAAATCTTTCAGAGA 58.010 36.000 0.00 0.00 45.00 3.10
330 352 7.385752 TGGTTACCAACGTAGTAAATCTTTCAG 59.614 37.037 0.00 0.00 45.00 3.02
342 364 3.126343 GCCAGAAATGGTTACCAACGTAG 59.874 47.826 8.63 0.00 36.95 3.51
343 365 3.075884 GCCAGAAATGGTTACCAACGTA 58.924 45.455 8.63 0.00 36.95 3.57
344 366 1.883926 GCCAGAAATGGTTACCAACGT 59.116 47.619 8.63 0.00 36.95 3.99
345 367 2.159382 AGCCAGAAATGGTTACCAACG 58.841 47.619 8.63 0.00 36.95 4.10
346 368 3.153919 TGAGCCAGAAATGGTTACCAAC 58.846 45.455 8.63 3.33 36.95 3.77
347 369 3.517296 TGAGCCAGAAATGGTTACCAA 57.483 42.857 8.63 0.00 36.95 3.67
348 370 3.737559 ATGAGCCAGAAATGGTTACCA 57.262 42.857 6.53 6.53 38.19 3.25
349 371 4.035208 CGTAATGAGCCAGAAATGGTTACC 59.965 45.833 0.00 0.00 0.00 2.85
350 372 4.873827 TCGTAATGAGCCAGAAATGGTTAC 59.126 41.667 0.00 0.00 0.00 2.50
351 373 4.873827 GTCGTAATGAGCCAGAAATGGTTA 59.126 41.667 0.00 0.00 0.00 2.85
352 374 3.689649 GTCGTAATGAGCCAGAAATGGTT 59.310 43.478 0.00 0.00 0.00 3.67
353 375 3.055094 AGTCGTAATGAGCCAGAAATGGT 60.055 43.478 0.00 0.00 0.00 3.55
354 376 3.535561 AGTCGTAATGAGCCAGAAATGG 58.464 45.455 0.00 0.00 0.00 3.16
355 377 4.183865 TGAGTCGTAATGAGCCAGAAATG 58.816 43.478 0.00 0.00 0.00 2.32
356 378 4.471904 TGAGTCGTAATGAGCCAGAAAT 57.528 40.909 0.00 0.00 0.00 2.17
357 379 3.953712 TGAGTCGTAATGAGCCAGAAA 57.046 42.857 0.00 0.00 0.00 2.52
358 380 4.471904 AATGAGTCGTAATGAGCCAGAA 57.528 40.909 0.00 0.00 0.00 3.02
359 381 4.160439 AGAAATGAGTCGTAATGAGCCAGA 59.840 41.667 0.00 0.00 0.00 3.86
360 382 4.437239 AGAAATGAGTCGTAATGAGCCAG 58.563 43.478 0.00 0.00 0.00 4.85
361 383 4.160439 AGAGAAATGAGTCGTAATGAGCCA 59.840 41.667 0.00 0.00 0.00 4.75
362 384 4.688021 AGAGAAATGAGTCGTAATGAGCC 58.312 43.478 0.00 0.00 0.00 4.70
363 385 6.473521 CAAAGAGAAATGAGTCGTAATGAGC 58.526 40.000 0.00 0.00 0.00 4.26
364 386 6.312426 AGCAAAGAGAAATGAGTCGTAATGAG 59.688 38.462 0.00 0.00 0.00 2.90
365 387 6.166279 AGCAAAGAGAAATGAGTCGTAATGA 58.834 36.000 0.00 0.00 0.00 2.57
366 388 6.312426 AGAGCAAAGAGAAATGAGTCGTAATG 59.688 38.462 0.00 0.00 0.00 1.90
367 389 6.402222 AGAGCAAAGAGAAATGAGTCGTAAT 58.598 36.000 0.00 0.00 0.00 1.89
368 390 5.784177 AGAGCAAAGAGAAATGAGTCGTAA 58.216 37.500 0.00 0.00 0.00 3.18
392 414 2.033675 TGTGTGTGCTGCTCAAATGAAG 59.966 45.455 5.91 0.00 0.00 3.02
403 425 1.534595 GCTTTTGGAGTGTGTGTGCTG 60.535 52.381 0.00 0.00 0.00 4.41
406 428 1.534595 GCTGCTTTTGGAGTGTGTGTG 60.535 52.381 0.00 0.00 40.26 3.82
515 571 4.934602 GCCACATAGCATAGGAAGAATCTC 59.065 45.833 0.00 0.00 0.00 2.75
608 676 3.639561 CCATGAGATGCATCATCCCAAAA 59.360 43.478 27.81 7.35 41.36 2.44
651 719 7.397192 AGGTGGCAAAGACATATCTAACAAAAT 59.603 33.333 0.00 0.00 33.57 1.82
655 723 5.435686 AGGTGGCAAAGACATATCTAACA 57.564 39.130 0.00 0.00 33.57 2.41
656 724 6.759497 AAAGGTGGCAAAGACATATCTAAC 57.241 37.500 0.00 0.00 33.57 2.34
699 768 1.555533 GTCCAAAACAACCCAACCCAA 59.444 47.619 0.00 0.00 0.00 4.12
707 776 1.886542 CCAGCCTAGTCCAAAACAACC 59.113 52.381 0.00 0.00 0.00 3.77
709 778 2.173782 TGACCAGCCTAGTCCAAAACAA 59.826 45.455 0.00 0.00 33.09 2.83
744 813 5.934625 AGACTAAACAACACCTGATCATCAC 59.065 40.000 0.00 0.00 0.00 3.06
788 857 2.071688 AGAACAGCAGAAGTAGCGTG 57.928 50.000 0.00 0.00 37.01 5.34
824 893 3.701040 GCAGCCTTTATCATCTTTCCCAA 59.299 43.478 0.00 0.00 0.00 4.12
825 894 3.290710 GCAGCCTTTATCATCTTTCCCA 58.709 45.455 0.00 0.00 0.00 4.37
836 905 2.434336 TGTATCGTGAGGCAGCCTTTAT 59.566 45.455 17.46 9.47 31.76 1.40
851 920 6.203530 ACATCTTCTTGTGCCATATTGTATCG 59.796 38.462 0.00 0.00 0.00 2.92
859 928 5.703592 ACGTAAAACATCTTCTTGTGCCATA 59.296 36.000 0.00 0.00 0.00 2.74
863 932 5.090652 TGACGTAAAACATCTTCTTGTGC 57.909 39.130 0.00 0.00 0.00 4.57
864 933 6.009474 CGATGACGTAAAACATCTTCTTGTG 58.991 40.000 11.74 0.00 40.18 3.33
892 962 2.760092 TGAGCTTGGTATGAATTTGGCC 59.240 45.455 0.00 0.00 0.00 5.36
893 963 3.193267 TGTGAGCTTGGTATGAATTTGGC 59.807 43.478 0.00 0.00 0.00 4.52
910 980 1.202687 TCAGGCTTTGGACACTGTGAG 60.203 52.381 15.86 1.78 32.92 3.51
942 1012 0.034059 CTCTTGGACGACCTGCAGTT 59.966 55.000 13.81 0.00 37.04 3.16
1074 1144 0.331616 CAAAGGTCCCTTCCCCGATT 59.668 55.000 0.00 0.00 34.84 3.34
1107 1177 5.129634 TCCATAGTTTCAGTGTTCTTTGCA 58.870 37.500 0.00 0.00 0.00 4.08
1155 1225 4.160329 TGAGCTTCTGAACCTTCTCCTTA 58.840 43.478 0.00 0.00 0.00 2.69
1224 1295 6.313905 ACACAAGGAATATGAAGAAACTAGCG 59.686 38.462 0.00 0.00 0.00 4.26
1302 1376 7.856145 AAGATGATATGGTTGACTGAACTTC 57.144 36.000 0.00 0.00 34.66 3.01
1339 1418 9.694137 GCTTGGTTACTGGATATTAACTACTAG 57.306 37.037 0.00 0.00 0.00 2.57
1341 1420 7.126726 TGGCTTGGTTACTGGATATTAACTACT 59.873 37.037 0.00 0.00 0.00 2.57
1342 1421 7.277396 TGGCTTGGTTACTGGATATTAACTAC 58.723 38.462 0.00 0.00 0.00 2.73
1344 1423 6.321821 TGGCTTGGTTACTGGATATTAACT 57.678 37.500 0.00 0.00 0.00 2.24
1345 1424 5.008712 GCTGGCTTGGTTACTGGATATTAAC 59.991 44.000 0.00 0.00 0.00 2.01
1348 1427 3.053693 TGCTGGCTTGGTTACTGGATATT 60.054 43.478 0.00 0.00 0.00 1.28
1349 1428 2.509548 TGCTGGCTTGGTTACTGGATAT 59.490 45.455 0.00 0.00 0.00 1.63
1350 1429 1.912731 TGCTGGCTTGGTTACTGGATA 59.087 47.619 0.00 0.00 0.00 2.59
1352 1431 0.476338 TTGCTGGCTTGGTTACTGGA 59.524 50.000 0.00 0.00 0.00 3.86
1353 1432 1.327303 TTTGCTGGCTTGGTTACTGG 58.673 50.000 0.00 0.00 0.00 4.00
1354 1433 2.622942 TCTTTTGCTGGCTTGGTTACTG 59.377 45.455 0.00 0.00 0.00 2.74
1375 1521 8.189119 TCAGCAAAAAGGTAAGGAACATAATT 57.811 30.769 0.00 0.00 0.00 1.40
1384 1530 3.507233 TGCATCTCAGCAAAAAGGTAAGG 59.493 43.478 0.00 0.00 42.46 2.69
1396 1542 1.516161 TGACAACTGTGCATCTCAGC 58.484 50.000 2.87 0.00 36.50 4.26
1459 1631 8.808092 AGTTAGCTCCTTGATATAAGGATGTAC 58.192 37.037 8.69 5.84 44.75 2.90
1460 1632 8.807118 CAGTTAGCTCCTTGATATAAGGATGTA 58.193 37.037 8.69 2.01 44.75 2.29
1461 1633 7.256475 CCAGTTAGCTCCTTGATATAAGGATGT 60.256 40.741 8.69 2.85 44.75 3.06
1466 1638 7.531857 TCTCCAGTTAGCTCCTTGATATAAG 57.468 40.000 0.00 0.00 0.00 1.73
1616 1793 5.875224 TGGTGATATGACTTCAGTTGGAAA 58.125 37.500 0.00 0.00 34.44 3.13
1648 1826 8.409358 AAAACTGCACAAGATACTAGGAAAAT 57.591 30.769 0.00 0.00 0.00 1.82
1673 1851 5.507817 GCACAAAGTTCAGACATCAATTGGA 60.508 40.000 5.42 0.00 0.00 3.53
1704 1882 4.437239 TGTTGGCATTGAATTTCGTGTTT 58.563 34.783 0.00 0.00 0.00 2.83
1798 1976 4.501058 GGAAGAACACCGAAGTAGTGAAGT 60.501 45.833 0.00 0.00 38.63 3.01
1822 2002 2.633199 ACGGCTAGAACTTCGAACTC 57.367 50.000 0.00 0.00 0.00 3.01
1964 2147 2.872245 GCGCCTAATCTGCATTGAGTTA 59.128 45.455 0.00 0.00 0.00 2.24
2061 2244 3.469008 TGGCGATAAATCCTGAATCGT 57.531 42.857 5.91 0.00 43.33 3.73
2121 2304 8.771920 AAAGCAAATATTAGCAAAAAGGTACC 57.228 30.769 2.73 2.73 0.00 3.34
2182 2367 8.210946 CCTCCAGTAATGTATTCCAGAACAATA 58.789 37.037 0.00 0.00 0.00 1.90
2407 2592 3.307410 CCCTACTGTGGCAATAGTCAACA 60.307 47.826 8.72 0.00 0.00 3.33
2543 2728 7.495279 AGCAACAAATTTTCTAACTGCAAATGA 59.505 29.630 0.00 0.00 0.00 2.57
2603 2788 4.884744 TGCTCAGTTAAAGCACTTAAACCA 59.115 37.500 0.00 0.00 44.51 3.67
2666 2851 6.463190 GCCAGTTGGAAATTTACCCAAAGTTA 60.463 38.462 11.76 0.00 43.30 2.24
2730 2918 2.626266 TCAGCCTGTACAGTCGAAGAAA 59.374 45.455 21.18 0.00 39.69 2.52
2741 2929 0.035056 AGCAACCCATCAGCCTGTAC 60.035 55.000 0.00 0.00 0.00 2.90
2752 2940 1.042003 ATGTTGTGTGCAGCAACCCA 61.042 50.000 23.24 11.88 43.86 4.51
2818 3008 8.725148 GGATTGGACACATGATATTAAGATGAC 58.275 37.037 0.00 0.00 0.00 3.06
2828 3018 6.384015 AGTTCTAGTGGATTGGACACATGATA 59.616 38.462 0.00 0.00 41.21 2.15
2866 3056 7.067496 TCCTCAATCACCTACATAGAAATCC 57.933 40.000 0.00 0.00 0.00 3.01
3208 3399 4.460263 TGTCACTTACAGTTGCAGGATTT 58.540 39.130 0.00 0.00 33.01 2.17
3295 3486 7.602644 TGGTGTTTCTTTTATAGTACTGCTCAG 59.397 37.037 5.39 0.00 0.00 3.35
3345 3537 7.865706 TGGGATTCTATAACTTCTTTTCAGC 57.134 36.000 0.00 0.00 0.00 4.26
3452 3644 2.683211 AAACAGGTGGCTTGAATCCT 57.317 45.000 0.00 0.00 0.00 3.24
3771 3963 4.917906 AGGAATGGAGGGAGTATAATGC 57.082 45.455 0.00 0.00 0.00 3.56
3777 3969 8.344939 ACAAATATTTAGGAATGGAGGGAGTA 57.655 34.615 0.00 0.00 0.00 2.59
3778 3970 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
3779 3971 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
3780 3972 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
3781 3973 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
3799 3991 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
3800 3992 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
3804 3996 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
3805 3997 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
3806 3998 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
3807 3999 7.606456 GTGTGGTAGTCCATTTGAAATCTCTAA 59.394 37.037 0.00 0.00 46.20 2.10
3808 4000 7.103641 GTGTGGTAGTCCATTTGAAATCTCTA 58.896 38.462 0.00 0.00 46.20 2.43
3809 4001 5.940470 GTGTGGTAGTCCATTTGAAATCTCT 59.060 40.000 0.00 0.00 46.20 3.10
3810 4002 5.705441 TGTGTGGTAGTCCATTTGAAATCTC 59.295 40.000 0.00 0.00 46.20 2.75
3811 4003 5.473504 GTGTGTGGTAGTCCATTTGAAATCT 59.526 40.000 0.00 0.00 46.20 2.40
3812 4004 5.616866 CGTGTGTGGTAGTCCATTTGAAATC 60.617 44.000 0.00 0.00 46.20 2.17
3813 4005 4.215399 CGTGTGTGGTAGTCCATTTGAAAT 59.785 41.667 0.00 0.00 46.20 2.17
3814 4006 3.562141 CGTGTGTGGTAGTCCATTTGAAA 59.438 43.478 0.00 0.00 46.20 2.69
3815 4007 3.135225 CGTGTGTGGTAGTCCATTTGAA 58.865 45.455 0.00 0.00 46.20 2.69
3816 4008 2.549134 CCGTGTGTGGTAGTCCATTTGA 60.549 50.000 0.00 0.00 46.20 2.69
3817 4009 1.804151 CCGTGTGTGGTAGTCCATTTG 59.196 52.381 0.00 0.00 46.20 2.32
3818 4010 1.695242 TCCGTGTGTGGTAGTCCATTT 59.305 47.619 0.00 0.00 46.20 2.32
3819 4011 1.344065 TCCGTGTGTGGTAGTCCATT 58.656 50.000 0.00 0.00 46.20 3.16
3820 4012 1.207089 CATCCGTGTGTGGTAGTCCAT 59.793 52.381 0.00 0.00 46.20 3.41
3821 4013 0.606096 CATCCGTGTGTGGTAGTCCA 59.394 55.000 0.00 0.00 42.05 4.02
3822 4014 0.606604 ACATCCGTGTGTGGTAGTCC 59.393 55.000 0.00 0.00 37.14 3.85
3823 4015 3.795623 ATACATCCGTGTGTGGTAGTC 57.204 47.619 0.66 0.00 39.39 2.59
3824 4016 6.206243 GTCTATATACATCCGTGTGTGGTAGT 59.794 42.308 0.66 0.00 39.39 2.73
3825 4017 6.206048 TGTCTATATACATCCGTGTGTGGTAG 59.794 42.308 0.66 1.63 39.39 3.18
3826 4018 6.063404 TGTCTATATACATCCGTGTGTGGTA 58.937 40.000 0.66 0.00 39.39 3.25
3827 4019 4.891168 TGTCTATATACATCCGTGTGTGGT 59.109 41.667 0.66 0.00 39.39 4.16
3828 4020 5.447624 TGTCTATATACATCCGTGTGTGG 57.552 43.478 0.66 0.00 39.39 4.17
3829 4021 9.639601 AAATATGTCTATATACATCCGTGTGTG 57.360 33.333 7.00 0.00 40.52 3.82
3860 4052 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
3861 4053 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
3862 4054 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
3863 4055 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
3864 4056 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
3865 4057 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
3866 4058 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
3867 4059 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
3868 4060 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
3869 4061 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
3870 4062 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
3871 4063 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
3872 4064 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
3873 4065 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
3874 4066 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
3875 4067 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
3876 4068 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
3877 4069 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
3878 4070 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
3879 4071 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
3880 4072 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
3881 4073 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
3882 4074 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
3883 4075 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3884 4076 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3886 4078 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
3887 4079 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
3888 4080 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
3889 4081 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
3890 4082 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
3891 4083 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
3892 4084 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
3893 4085 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
3894 4086 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3907 4099 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3908 4100 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3909 4101 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3910 4102 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3911 4103 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3912 4104 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3913 4105 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3914 4106 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3915 4107 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3916 4108 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3917 4109 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3918 4110 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3919 4111 6.557633 ACATACTCCCTCCGTTCCTAAATATT 59.442 38.462 0.00 0.00 0.00 1.28
3920 4112 6.082707 ACATACTCCCTCCGTTCCTAAATAT 58.917 40.000 0.00 0.00 0.00 1.28
3921 4113 5.461327 ACATACTCCCTCCGTTCCTAAATA 58.539 41.667 0.00 0.00 0.00 1.40
3922 4114 4.296056 ACATACTCCCTCCGTTCCTAAAT 58.704 43.478 0.00 0.00 0.00 1.40
3923 4115 3.703052 GACATACTCCCTCCGTTCCTAAA 59.297 47.826 0.00 0.00 0.00 1.85
3924 4116 3.053095 AGACATACTCCCTCCGTTCCTAA 60.053 47.826 0.00 0.00 0.00 2.69
3925 4117 2.512896 AGACATACTCCCTCCGTTCCTA 59.487 50.000 0.00 0.00 0.00 2.94
3926 4118 1.288335 AGACATACTCCCTCCGTTCCT 59.712 52.381 0.00 0.00 0.00 3.36
3927 4119 1.777941 AGACATACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
3928 4120 5.532664 AATAAGACATACTCCCTCCGTTC 57.467 43.478 0.00 0.00 0.00 3.95
3929 4121 6.553852 ACATAATAAGACATACTCCCTCCGTT 59.446 38.462 0.00 0.00 0.00 4.44
3930 4122 6.015350 CACATAATAAGACATACTCCCTCCGT 60.015 42.308 0.00 0.00 0.00 4.69
3931 4123 6.015350 ACACATAATAAGACATACTCCCTCCG 60.015 42.308 0.00 0.00 0.00 4.63
3932 4124 7.155328 CACACATAATAAGACATACTCCCTCC 58.845 42.308 0.00 0.00 0.00 4.30
3933 4125 7.155328 CCACACATAATAAGACATACTCCCTC 58.845 42.308 0.00 0.00 0.00 4.30
3934 4126 6.615726 ACCACACATAATAAGACATACTCCCT 59.384 38.462 0.00 0.00 0.00 4.20
3935 4127 6.827727 ACCACACATAATAAGACATACTCCC 58.172 40.000 0.00 0.00 0.00 4.30
3936 4128 7.727181 AGACCACACATAATAAGACATACTCC 58.273 38.462 0.00 0.00 0.00 3.85
3937 4129 7.868415 GGAGACCACACATAATAAGACATACTC 59.132 40.741 0.00 0.00 0.00 2.59
3938 4130 7.727181 GGAGACCACACATAATAAGACATACT 58.273 38.462 0.00 0.00 0.00 2.12
3939 4131 7.948278 GGAGACCACACATAATAAGACATAC 57.052 40.000 0.00 0.00 0.00 2.39
3960 4152 4.696479 AACAGGCAATAGAGTATGGGAG 57.304 45.455 0.00 0.00 0.00 4.30
3968 4160 2.821969 AGGCAACAAACAGGCAATAGAG 59.178 45.455 0.00 0.00 41.41 2.43
4417 4612 7.954666 AGGTTGCCACATAAAAACATATAGT 57.045 32.000 0.00 0.00 0.00 2.12
4418 4613 8.465999 TGAAGGTTGCCACATAAAAACATATAG 58.534 33.333 0.00 0.00 0.00 1.31
4448 4643 4.534500 TGTAGGGATGGAGCTACTTGAAAA 59.466 41.667 0.00 0.00 0.00 2.29
4540 4735 5.182950 TCGCAGAGAATTTTAATGGCAAAGA 59.817 36.000 0.00 0.00 0.00 2.52
4569 4764 9.299963 CTTGTGAAAACAATGATTTGACAGTTA 57.700 29.630 8.05 0.00 35.76 2.24
4580 4777 6.625362 TGTTACTTGCTTGTGAAAACAATGA 58.375 32.000 0.00 0.00 0.00 2.57
4646 4844 0.608640 CTACGTCCTTGAGCTGGGTT 59.391 55.000 0.00 0.00 0.00 4.11
4705 4903 2.367894 TGGAAAATTGTGCTTCATGCCA 59.632 40.909 0.00 0.00 42.00 4.92
4763 4966 3.505790 AATCCGCAGCCAACACCCA 62.506 57.895 0.00 0.00 0.00 4.51
4780 4983 1.227823 CTCGGTCTGCACAACCCAA 60.228 57.895 7.73 0.00 32.89 4.12
4809 5012 4.582441 TCGTCATCATCATCAACAAACG 57.418 40.909 0.00 0.00 0.00 3.60
4826 5035 2.229062 TCATCGGAGCCTATTCATCGTC 59.771 50.000 0.00 0.00 0.00 4.20
4827 5036 2.239400 TCATCGGAGCCTATTCATCGT 58.761 47.619 0.00 0.00 0.00 3.73
4828 5037 3.303881 TTCATCGGAGCCTATTCATCG 57.696 47.619 0.00 0.00 0.00 3.84
4906 5115 5.426504 CCTCTGGACCATGAATATATCAGC 58.573 45.833 0.00 0.00 42.53 4.26
4907 5116 5.723405 TCCCTCTGGACCATGAATATATCAG 59.277 44.000 0.00 0.00 37.30 2.90
4909 5118 5.960811 TCTCCCTCTGGACCATGAATATATC 59.039 44.000 0.00 0.00 35.03 1.63
4910 5119 5.920347 TCTCCCTCTGGACCATGAATATAT 58.080 41.667 0.00 0.00 35.03 0.86
4978 5189 6.136857 TGAGCTGTTCAGTATAACCTCCTAT 58.863 40.000 0.00 0.00 0.00 2.57
4991 5202 4.285292 GTTCAACACATTGAGCTGTTCAG 58.715 43.478 0.00 0.00 45.54 3.02
5000 5211 6.266168 ACAGAACAAAGTTCAACACATTGA 57.734 33.333 11.92 0.00 43.28 2.57
5022 5233 8.891720 ACTACAGTACAATGCTAAGTAGAGTAC 58.108 37.037 0.00 0.00 33.56 2.73
5050 5267 3.314307 TGATATCTCCCCGGCTATAGG 57.686 52.381 3.98 0.00 0.00 2.57
5115 5332 1.960040 ATCGCCGACAAGGATCAGCA 61.960 55.000 0.00 0.00 45.00 4.41
5156 5373 2.866762 GTCAGTTACGATTCCATGAGCC 59.133 50.000 0.00 0.00 0.00 4.70
5210 5481 4.578516 TCTTTCTGTTCGCAATTTGGAGAA 59.421 37.500 0.00 0.00 0.00 2.87
5232 5503 0.100146 GTCCGTGGTCCGACTACATC 59.900 60.000 14.61 1.64 39.56 3.06
5347 5618 0.952984 ACGAGAGAGCAAGCCAAAGC 60.953 55.000 0.00 0.00 40.32 3.51
5348 5619 0.795085 CACGAGAGAGCAAGCCAAAG 59.205 55.000 0.00 0.00 0.00 2.77
5349 5620 2.918571 CACGAGAGAGCAAGCCAAA 58.081 52.632 0.00 0.00 0.00 3.28
5350 5621 4.681421 CACGAGAGAGCAAGCCAA 57.319 55.556 0.00 0.00 0.00 4.52
5388 5659 3.119096 GGCCGAACTCCGAAGTGC 61.119 66.667 0.00 0.00 41.76 4.40
5389 5660 2.434359 GGGCCGAACTCCGAAGTG 60.434 66.667 0.00 0.00 41.76 3.16
5390 5661 3.703127 GGGGCCGAACTCCGAAGT 61.703 66.667 0.00 0.00 41.76 3.01
5391 5662 4.814294 CGGGGCCGAACTCCGAAG 62.814 72.222 11.55 0.00 45.96 3.79
5396 5667 4.754667 GTCACCGGGGCCGAACTC 62.755 72.222 6.32 0.00 42.83 3.01
5418 5689 4.179579 GTCGGGAAATGCCAGCGC 62.180 66.667 0.00 0.00 38.95 5.92
5419 5690 3.508840 GGTCGGGAAATGCCAGCG 61.509 66.667 0.00 0.00 38.95 5.18
5420 5691 3.140814 GGGTCGGGAAATGCCAGC 61.141 66.667 0.00 0.00 38.95 4.85
5421 5692 2.824041 CGGGTCGGGAAATGCCAG 60.824 66.667 0.00 0.00 38.95 4.85
5422 5693 4.418328 CCGGGTCGGGAAATGCCA 62.418 66.667 0.00 0.00 44.15 4.92
5455 5726 2.383527 GCGAGTCAAAGCCGTCTGG 61.384 63.158 0.00 0.00 38.77 3.86
5456 5727 2.383527 GGCGAGTCAAAGCCGTCTG 61.384 63.158 0.00 0.00 44.22 3.51
5457 5728 2.048127 GGCGAGTCAAAGCCGTCT 60.048 61.111 0.00 0.00 44.22 4.18
5481 5752 1.153449 TTAAGCCGACCCAGATGCG 60.153 57.895 0.00 0.00 0.00 4.73
5482 5753 0.107654 AGTTAAGCCGACCCAGATGC 60.108 55.000 0.00 0.00 0.00 3.91
5483 5754 1.802880 CGAGTTAAGCCGACCCAGATG 60.803 57.143 0.00 0.00 0.00 2.90
5484 5755 0.460311 CGAGTTAAGCCGACCCAGAT 59.540 55.000 0.00 0.00 0.00 2.90
5485 5756 1.601419 CCGAGTTAAGCCGACCCAGA 61.601 60.000 0.00 0.00 0.00 3.86
5486 5757 1.153628 CCGAGTTAAGCCGACCCAG 60.154 63.158 0.00 0.00 0.00 4.45
5487 5758 1.474332 AACCGAGTTAAGCCGACCCA 61.474 55.000 0.00 0.00 0.00 4.51
5488 5759 0.321034 AAACCGAGTTAAGCCGACCC 60.321 55.000 0.00 0.00 0.00 4.46
5489 5760 1.516161 AAAACCGAGTTAAGCCGACC 58.484 50.000 0.00 0.00 0.00 4.79
5510 5781 3.504520 CCGAGTTAAGCTTGCCCTAAAAA 59.495 43.478 9.86 0.00 0.00 1.94
5511 5782 3.078837 CCGAGTTAAGCTTGCCCTAAAA 58.921 45.455 9.86 0.00 0.00 1.52
5512 5783 2.617021 CCCGAGTTAAGCTTGCCCTAAA 60.617 50.000 9.86 0.00 0.00 1.85
5513 5784 1.065709 CCCGAGTTAAGCTTGCCCTAA 60.066 52.381 9.86 0.00 0.00 2.69
5514 5785 0.539986 CCCGAGTTAAGCTTGCCCTA 59.460 55.000 9.86 0.00 0.00 3.53
5515 5786 1.299976 CCCGAGTTAAGCTTGCCCT 59.700 57.895 9.86 1.32 0.00 5.19
5516 5787 2.407428 GCCCGAGTTAAGCTTGCCC 61.407 63.158 9.86 0.00 0.00 5.36
5517 5788 1.377333 AGCCCGAGTTAAGCTTGCC 60.377 57.895 9.86 0.00 31.27 4.52
5518 5789 1.648467 CCAGCCCGAGTTAAGCTTGC 61.648 60.000 9.86 1.40 33.70 4.01
5519 5790 1.026718 CCCAGCCCGAGTTAAGCTTG 61.027 60.000 9.86 0.00 33.70 4.01
5520 5791 1.299976 CCCAGCCCGAGTTAAGCTT 59.700 57.895 3.48 3.48 33.70 3.74
5521 5792 2.990479 CCCAGCCCGAGTTAAGCT 59.010 61.111 0.00 0.00 37.32 3.74
5522 5793 2.824489 GCCCAGCCCGAGTTAAGC 60.824 66.667 0.00 0.00 0.00 3.09
5523 5794 0.608035 TTTGCCCAGCCCGAGTTAAG 60.608 55.000 0.00 0.00 0.00 1.85
5524 5795 0.608035 CTTTGCCCAGCCCGAGTTAA 60.608 55.000 0.00 0.00 0.00 2.01
5525 5796 1.002624 CTTTGCCCAGCCCGAGTTA 60.003 57.895 0.00 0.00 0.00 2.24
5526 5797 2.282462 CTTTGCCCAGCCCGAGTT 60.282 61.111 0.00 0.00 0.00 3.01
5538 5809 2.125673 TCCTCGCGTAGGCTTTGC 60.126 61.111 16.74 0.00 46.10 3.68
5539 5810 0.802607 GACTCCTCGCGTAGGCTTTG 60.803 60.000 16.74 10.49 46.10 2.77
5540 5811 1.511768 GACTCCTCGCGTAGGCTTT 59.488 57.895 16.74 6.11 46.10 3.51
5541 5812 2.416432 GGACTCCTCGCGTAGGCTT 61.416 63.158 16.74 8.11 46.10 4.35
5542 5813 2.829458 GGACTCCTCGCGTAGGCT 60.829 66.667 16.74 0.00 46.10 4.58
5543 5814 2.017559 ATTGGACTCCTCGCGTAGGC 62.018 60.000 16.74 10.59 46.10 3.93
5545 5816 0.738975 TCATTGGACTCCTCGCGTAG 59.261 55.000 5.77 5.11 0.00 3.51
5546 5817 0.738975 CTCATTGGACTCCTCGCGTA 59.261 55.000 5.77 0.00 0.00 4.42
5547 5818 0.965866 TCTCATTGGACTCCTCGCGT 60.966 55.000 5.77 0.00 0.00 6.01
5548 5819 0.387202 ATCTCATTGGACTCCTCGCG 59.613 55.000 0.00 0.00 0.00 5.87
5549 5820 1.410517 TCATCTCATTGGACTCCTCGC 59.589 52.381 0.00 0.00 0.00 5.03
5550 5821 3.320256 TGATCATCTCATTGGACTCCTCG 59.680 47.826 0.00 0.00 0.00 4.63
5551 5822 4.952071 TGATCATCTCATTGGACTCCTC 57.048 45.455 0.00 0.00 0.00 3.71
5552 5823 5.156649 AGATGATCATCTCATTGGACTCCT 58.843 41.667 28.92 5.97 44.37 3.69
5553 5824 5.486735 AGATGATCATCTCATTGGACTCC 57.513 43.478 28.92 3.47 44.37 3.85
5567 5838 3.117776 CCCCAAGTCCAATGAGATGATCA 60.118 47.826 0.00 0.00 43.70 2.92
5568 5839 3.484407 CCCCAAGTCCAATGAGATGATC 58.516 50.000 0.00 0.00 0.00 2.92
5569 5840 2.423947 GCCCCAAGTCCAATGAGATGAT 60.424 50.000 0.00 0.00 0.00 2.45
5570 5841 1.064463 GCCCCAAGTCCAATGAGATGA 60.064 52.381 0.00 0.00 0.00 2.92
5571 5842 1.396653 GCCCCAAGTCCAATGAGATG 58.603 55.000 0.00 0.00 0.00 2.90
5572 5843 0.107017 CGCCCCAAGTCCAATGAGAT 60.107 55.000 0.00 0.00 0.00 2.75
5573 5844 1.299648 CGCCCCAAGTCCAATGAGA 59.700 57.895 0.00 0.00 0.00 3.27
5574 5845 1.750399 CCGCCCCAAGTCCAATGAG 60.750 63.158 0.00 0.00 0.00 2.90
5575 5846 2.354729 CCGCCCCAAGTCCAATGA 59.645 61.111 0.00 0.00 0.00 2.57
5576 5847 2.572333 ATCCCGCCCCAAGTCCAATG 62.572 60.000 0.00 0.00 0.00 2.82
5577 5848 2.284515 GATCCCGCCCCAAGTCCAAT 62.285 60.000 0.00 0.00 0.00 3.16
5578 5849 2.938798 ATCCCGCCCCAAGTCCAA 60.939 61.111 0.00 0.00 0.00 3.53
5579 5850 3.407967 GATCCCGCCCCAAGTCCA 61.408 66.667 0.00 0.00 0.00 4.02
5580 5851 4.191015 GGATCCCGCCCCAAGTCC 62.191 72.222 0.00 0.00 0.00 3.85
5581 5852 3.090532 AGGATCCCGCCCCAAGTC 61.091 66.667 8.55 0.00 0.00 3.01
5582 5853 3.090532 GAGGATCCCGCCCCAAGT 61.091 66.667 8.55 0.00 0.00 3.16
5583 5854 2.770048 AGAGGATCCCGCCCCAAG 60.770 66.667 8.55 0.00 33.66 3.61
5584 5855 2.768344 GAGAGGATCCCGCCCCAA 60.768 66.667 8.55 0.00 33.66 4.12
5585 5856 4.088351 TGAGAGGATCCCGCCCCA 62.088 66.667 8.55 0.00 33.66 4.96
5586 5857 3.551407 GTGAGAGGATCCCGCCCC 61.551 72.222 8.55 0.00 33.66 5.80
5587 5858 3.917760 CGTGAGAGGATCCCGCCC 61.918 72.222 8.55 0.00 33.66 6.13
5588 5859 1.826921 TACGTGAGAGGATCCCGCC 60.827 63.158 8.55 0.00 33.66 6.13
5589 5860 1.102222 AGTACGTGAGAGGATCCCGC 61.102 60.000 8.55 0.33 33.66 6.13
5590 5861 0.945813 GAGTACGTGAGAGGATCCCG 59.054 60.000 8.55 6.99 33.66 5.14
5591 5862 2.054232 TGAGTACGTGAGAGGATCCC 57.946 55.000 8.55 0.00 33.66 3.85
5592 5863 2.359531 CCTTGAGTACGTGAGAGGATCC 59.640 54.545 2.48 2.48 33.66 3.36
5593 5864 2.359531 CCCTTGAGTACGTGAGAGGATC 59.640 54.545 0.00 0.00 0.00 3.36
5594 5865 2.025226 TCCCTTGAGTACGTGAGAGGAT 60.025 50.000 0.00 0.00 0.00 3.24
5595 5866 1.353358 TCCCTTGAGTACGTGAGAGGA 59.647 52.381 0.00 0.00 0.00 3.71
5596 5867 1.835494 TCCCTTGAGTACGTGAGAGG 58.165 55.000 0.00 0.00 0.00 3.69
5597 5868 2.820787 ACTTCCCTTGAGTACGTGAGAG 59.179 50.000 0.00 0.00 0.00 3.20
5598 5869 2.818432 GACTTCCCTTGAGTACGTGAGA 59.182 50.000 0.00 0.00 0.00 3.27
5599 5870 2.557056 TGACTTCCCTTGAGTACGTGAG 59.443 50.000 0.00 0.00 0.00 3.51
5600 5871 2.557056 CTGACTTCCCTTGAGTACGTGA 59.443 50.000 0.00 0.00 0.00 4.35
5601 5872 2.352814 CCTGACTTCCCTTGAGTACGTG 60.353 54.545 0.00 0.00 0.00 4.49
5602 5873 1.893801 CCTGACTTCCCTTGAGTACGT 59.106 52.381 0.00 0.00 0.00 3.57
5603 5874 1.204941 CCCTGACTTCCCTTGAGTACG 59.795 57.143 0.00 0.00 0.00 3.67
5604 5875 2.498078 CTCCCTGACTTCCCTTGAGTAC 59.502 54.545 0.00 0.00 0.00 2.73
5605 5876 2.821437 CTCCCTGACTTCCCTTGAGTA 58.179 52.381 0.00 0.00 0.00 2.59
5606 5877 1.650528 CTCCCTGACTTCCCTTGAGT 58.349 55.000 0.00 0.00 0.00 3.41
5607 5878 0.251634 GCTCCCTGACTTCCCTTGAG 59.748 60.000 0.00 0.00 0.00 3.02
5608 5879 0.178891 AGCTCCCTGACTTCCCTTGA 60.179 55.000 0.00 0.00 0.00 3.02
5609 5880 1.484240 CTAGCTCCCTGACTTCCCTTG 59.516 57.143 0.00 0.00 0.00 3.61
5610 5881 1.362932 TCTAGCTCCCTGACTTCCCTT 59.637 52.381 0.00 0.00 0.00 3.95
5611 5882 1.011595 TCTAGCTCCCTGACTTCCCT 58.988 55.000 0.00 0.00 0.00 4.20
5612 5883 1.342574 ACTCTAGCTCCCTGACTTCCC 60.343 57.143 0.00 0.00 0.00 3.97
5613 5884 2.153034 ACTCTAGCTCCCTGACTTCC 57.847 55.000 0.00 0.00 0.00 3.46
5614 5885 5.137551 AGAATACTCTAGCTCCCTGACTTC 58.862 45.833 0.00 0.00 0.00 3.01
5615 5886 5.137412 AGAATACTCTAGCTCCCTGACTT 57.863 43.478 0.00 0.00 0.00 3.01
5616 5887 4.806952 AGAATACTCTAGCTCCCTGACT 57.193 45.455 0.00 0.00 0.00 3.41
5617 5888 5.137551 AGAAGAATACTCTAGCTCCCTGAC 58.862 45.833 0.00 0.00 0.00 3.51
5618 5889 5.133660 AGAGAAGAATACTCTAGCTCCCTGA 59.866 44.000 0.00 0.00 42.03 3.86
5619 5890 5.385198 AGAGAAGAATACTCTAGCTCCCTG 58.615 45.833 0.00 0.00 42.03 4.45
5620 5891 5.663158 AGAGAAGAATACTCTAGCTCCCT 57.337 43.478 0.00 0.00 42.03 4.20
5621 5892 6.540083 AGTAGAGAAGAATACTCTAGCTCCC 58.460 44.000 0.00 0.00 44.26 4.30
5622 5893 9.734984 AATAGTAGAGAAGAATACTCTAGCTCC 57.265 37.037 0.00 0.00 44.26 4.70
5637 5908 9.148104 GCTCCGTTTCTTTTAAATAGTAGAGAA 57.852 33.333 0.00 0.00 0.00 2.87
5638 5909 7.487189 CGCTCCGTTTCTTTTAAATAGTAGAGA 59.513 37.037 0.00 0.00 0.00 3.10
5639 5910 7.275123 ACGCTCCGTTTCTTTTAAATAGTAGAG 59.725 37.037 0.00 0.00 36.35 2.43
5640 5911 7.092716 ACGCTCCGTTTCTTTTAAATAGTAGA 58.907 34.615 0.00 0.00 36.35 2.59
5641 5912 7.287050 ACGCTCCGTTTCTTTTAAATAGTAG 57.713 36.000 0.00 0.00 36.35 2.57
5657 5928 1.957695 GGGAAACGAAACGCTCCGT 60.958 57.895 0.00 0.00 43.97 4.69
5658 5929 1.296056 ATGGGAAACGAAACGCTCCG 61.296 55.000 0.00 0.00 34.36 4.63
5659 5930 0.446616 GATGGGAAACGAAACGCTCC 59.553 55.000 0.00 0.00 33.27 4.70
5660 5931 1.439679 AGATGGGAAACGAAACGCTC 58.560 50.000 0.00 0.00 0.00 5.03
5661 5932 1.892209 AAGATGGGAAACGAAACGCT 58.108 45.000 0.00 0.00 0.00 5.07
5662 5933 2.473376 CGTAAGATGGGAAACGAAACGC 60.473 50.000 0.00 0.00 37.53 4.84
5663 5934 2.733026 ACGTAAGATGGGAAACGAAACG 59.267 45.455 0.23 0.00 43.62 3.60
5664 5935 3.742369 TGACGTAAGATGGGAAACGAAAC 59.258 43.478 0.23 0.00 43.62 2.78
5665 5936 3.992643 TGACGTAAGATGGGAAACGAAA 58.007 40.909 0.23 0.00 43.62 3.46
5666 5937 3.663995 TGACGTAAGATGGGAAACGAA 57.336 42.857 0.23 0.00 43.62 3.85
5667 5938 3.663995 TTGACGTAAGATGGGAAACGA 57.336 42.857 0.23 0.00 43.62 3.85
5668 5939 3.422603 CGTTTGACGTAAGATGGGAAACG 60.423 47.826 0.00 0.00 38.49 3.60
5669 5940 4.061570 CGTTTGACGTAAGATGGGAAAC 57.938 45.455 0.00 0.00 43.62 2.78
5690 5961 4.144703 GGGAGGCGGACGAAGGAC 62.145 72.222 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.