Multiple sequence alignment - TraesCS4B01G178000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G178000 chr4B 100.000 6054 0 0 1 6054 389113124 389119177 0.000000e+00 11180.0
1 TraesCS4B01G178000 chr4B 93.757 897 43 10 1833 2720 28628214 28629106 0.000000e+00 1334.0
2 TraesCS4B01G178000 chr4B 94.805 77 4 0 4202 4278 38321616 38321540 2.960000e-23 121.0
3 TraesCS4B01G178000 chr4B 94.805 77 4 0 4202 4278 38354473 38354397 2.960000e-23 121.0
4 TraesCS4B01G178000 chr4D 95.238 2289 45 19 2813 5067 312564985 312567243 0.000000e+00 3565.0
5 TraesCS4B01G178000 chr4D 90.187 1875 64 32 1 1832 312563192 312564989 0.000000e+00 2333.0
6 TraesCS4B01G178000 chr4D 92.116 482 19 4 5071 5534 312567391 312567871 0.000000e+00 662.0
7 TraesCS4B01G178000 chr4D 96.364 275 8 1 5650 5924 312567874 312568146 9.250000e-123 451.0
8 TraesCS4B01G178000 chr4D 84.507 142 10 6 5722 5857 312583478 312583613 4.920000e-26 130.0
9 TraesCS4B01G178000 chr4D 86.441 59 2 5 3104 3162 98950321 98950373 6.550000e-05 60.2
10 TraesCS4B01G178000 chr4D 94.444 36 1 1 1054 1089 311958073 311958107 3.000000e-03 54.7
11 TraesCS4B01G178000 chr4D 96.875 32 0 1 3102 3133 199021268 199021298 1.100000e-02 52.8
12 TraesCS4B01G178000 chr7D 94.849 893 38 6 1833 2720 35545532 35546421 0.000000e+00 1387.0
13 TraesCS4B01G178000 chr7D 89.535 86 7 2 4315 4400 184573432 184573349 2.310000e-19 108.0
14 TraesCS4B01G178000 chr7D 95.000 40 2 0 5971 6010 602853779 602853740 5.070000e-06 63.9
15 TraesCS4B01G178000 chr1B 94.457 884 42 4 1842 2720 30465102 30464221 0.000000e+00 1354.0
16 TraesCS4B01G178000 chr1B 96.667 90 2 1 643 731 520682657 520682568 1.360000e-31 148.0
17 TraesCS4B01G178000 chr1B 91.463 82 6 1 4310 4390 584135350 584135431 1.780000e-20 111.0
18 TraesCS4B01G178000 chr1B 91.837 49 2 2 6006 6053 573943857 573943810 3.920000e-07 67.6
19 TraesCS4B01G178000 chr1B 84.058 69 7 3 5989 6053 659333409 659333477 5.070000e-06 63.9
20 TraesCS4B01G178000 chr3B 93.939 891 49 3 1834 2720 578586725 578585836 0.000000e+00 1341.0
21 TraesCS4B01G178000 chr3B 93.527 896 50 5 1831 2720 821812232 821813125 0.000000e+00 1327.0
22 TraesCS4B01G178000 chr3B 91.241 137 12 0 4389 4525 563178653 563178789 2.880000e-43 187.0
23 TraesCS4B01G178000 chr3B 90.647 139 11 1 4389 4525 165268228 165268090 3.730000e-42 183.0
24 TraesCS4B01G178000 chr3B 77.586 290 46 15 3087 3364 416656715 416656433 2.260000e-34 158.0
25 TraesCS4B01G178000 chr3B 97.619 42 1 0 6012 6053 452757521 452757480 8.420000e-09 73.1
26 TraesCS4B01G178000 chr3B 97.059 34 1 0 1059 1092 12904770 12904737 2.360000e-04 58.4
27 TraesCS4B01G178000 chr3B 90.244 41 4 0 5614 5654 373883216 373883176 3.000000e-03 54.7
28 TraesCS4B01G178000 chr2A 93.764 898 46 5 1828 2720 673033139 673034031 0.000000e+00 1339.0
29 TraesCS4B01G178000 chr2A 90.816 98 8 1 5545 5641 723523386 723523483 4.920000e-26 130.0
30 TraesCS4B01G178000 chr2A 82.946 129 9 6 4204 4319 44274867 44274995 2.980000e-18 104.0
31 TraesCS4B01G178000 chr2A 84.884 86 9 4 3098 3183 312711357 312711276 3.890000e-12 84.2
32 TraesCS4B01G178000 chr2A 80.392 102 14 6 3082 3183 249027590 249027685 8.420000e-09 73.1
33 TraesCS4B01G178000 chr4A 89.963 1086 38 17 756 1833 163918491 163917469 0.000000e+00 1336.0
34 TraesCS4B01G178000 chr4A 94.540 696 26 4 3250 3940 163915329 163914641 0.000000e+00 1064.0
35 TraesCS4B01G178000 chr4A 91.516 719 34 12 2 711 163919492 163918792 0.000000e+00 965.0
36 TraesCS4B01G178000 chr4A 92.308 559 34 6 4511 5063 163914222 163913667 0.000000e+00 785.0
37 TraesCS4B01G178000 chr4A 95.054 465 17 6 2802 3263 163917457 163916996 0.000000e+00 726.0
38 TraesCS4B01G178000 chr4A 84.483 348 28 13 5176 5519 163913630 163913305 2.720000e-83 320.0
39 TraesCS4B01G178000 chr4A 86.711 301 21 5 5650 5931 163913311 163913011 3.520000e-82 316.0
40 TraesCS4B01G178000 chr4A 90.566 212 15 4 4016 4226 163914480 163914273 5.980000e-70 276.0
41 TraesCS4B01G178000 chr4A 83.898 118 14 4 4205 4320 231024384 231024498 2.310000e-19 108.0
42 TraesCS4B01G178000 chr4A 89.583 48 5 0 3087 3134 461887146 461887099 1.820000e-05 62.1
43 TraesCS4B01G178000 chr2B 93.834 892 41 9 1834 2720 713532597 713533479 0.000000e+00 1330.0
44 TraesCS4B01G178000 chr2B 91.241 137 12 0 4389 4525 120234193 120234057 2.880000e-43 187.0
45 TraesCS4B01G178000 chr2B 85.714 154 16 6 4389 4540 182369521 182369372 2.260000e-34 158.0
46 TraesCS4B01G178000 chr2B 88.618 123 7 5 4205 4320 102975499 102975377 6.330000e-30 143.0
47 TraesCS4B01G178000 chr2B 85.714 133 6 7 4202 4321 706301943 706301811 1.770000e-25 128.0
48 TraesCS4B01G178000 chr2B 86.364 88 8 2 5074 5161 79676096 79676179 6.460000e-15 93.5
49 TraesCS4B01G178000 chr7B 93.631 895 47 6 1831 2718 581377750 581378641 0.000000e+00 1328.0
50 TraesCS4B01G178000 chr7B 92.199 141 7 3 4387 4525 427686158 427686296 4.790000e-46 196.0
51 TraesCS4B01G178000 chr7B 93.878 49 2 1 4488 4536 419475572 419475619 8.420000e-09 73.1
52 TraesCS4B01G178000 chr7B 93.750 48 1 2 6007 6053 657224238 657224192 3.030000e-08 71.3
53 TraesCS4B01G178000 chr7B 87.719 57 5 2 3087 3142 629885789 629885844 1.410000e-06 65.8
54 TraesCS4B01G178000 chr7B 94.737 38 2 0 5975 6012 613240127 613240090 6.550000e-05 60.2
55 TraesCS4B01G178000 chr2D 93.799 887 48 5 1830 2710 18759781 18758896 0.000000e+00 1327.0
56 TraesCS4B01G178000 chr2D 90.667 75 5 1 5097 5171 559209864 559209792 1.390000e-16 99.0
57 TraesCS4B01G178000 chr2D 85.870 92 11 2 5074 5163 48860572 48860663 4.990000e-16 97.1
58 TraesCS4B01G178000 chr2D 90.741 54 4 1 3092 3145 543828052 543828000 3.030000e-08 71.3
59 TraesCS4B01G178000 chr2D 82.500 80 13 1 5544 5622 5330722 5330643 1.090000e-07 69.4
60 TraesCS4B01G178000 chr2D 85.714 63 6 3 3083 3144 194673918 194673858 5.070000e-06 63.9
61 TraesCS4B01G178000 chr6D 92.701 137 10 0 4389 4525 426090636 426090500 1.330000e-46 198.0
62 TraesCS4B01G178000 chr6D 90.426 94 8 1 5560 5652 472049074 472049167 8.240000e-24 122.0
63 TraesCS4B01G178000 chr6D 91.566 83 5 2 4309 4391 294774927 294774847 4.960000e-21 113.0
64 TraesCS4B01G178000 chr6D 95.238 42 1 1 3092 3133 84013196 84013156 1.410000e-06 65.8
65 TraesCS4B01G178000 chr6B 91.971 137 11 0 4389 4525 390039467 390039331 6.190000e-45 193.0
66 TraesCS4B01G178000 chr6B 86.842 152 18 2 4389 4540 188830924 188831073 1.040000e-37 169.0
67 TraesCS4B01G178000 chr6B 85.870 92 10 1 5071 5162 435830322 435830234 1.800000e-15 95.3
68 TraesCS4B01G178000 chr6B 85.714 70 4 4 5989 6053 313149710 313149778 1.090000e-07 69.4
69 TraesCS4B01G178000 chr7A 91.971 137 10 1 4389 4525 708915694 708915559 2.230000e-44 191.0
70 TraesCS4B01G178000 chr7A 94.624 93 1 3 639 731 618182849 618182761 2.270000e-29 141.0
71 TraesCS4B01G178000 chr7A 93.750 80 5 0 4199 4278 708915825 708915746 2.960000e-23 121.0
72 TraesCS4B01G178000 chr7A 85.542 83 9 3 3101 3183 320605647 320605568 3.890000e-12 84.2
73 TraesCS4B01G178000 chr7A 85.366 82 8 4 3101 3182 613935432 613935355 1.400000e-11 82.4
74 TraesCS4B01G178000 chr7A 94.737 38 2 0 5971 6008 519171948 519171911 6.550000e-05 60.2
75 TraesCS4B01G178000 chr7A 94.737 38 2 0 5972 6009 635474319 635474282 6.550000e-05 60.2
76 TraesCS4B01G178000 chr5D 91.367 139 8 3 4389 4525 517961231 517961095 2.880000e-43 187.0
77 TraesCS4B01G178000 chr5D 87.143 140 18 0 3216 3355 158805345 158805484 6.280000e-35 159.0
78 TraesCS4B01G178000 chr5D 93.590 78 3 2 4313 4390 498669834 498669759 1.380000e-21 115.0
79 TraesCS4B01G178000 chr5D 89.247 93 1 6 4308 4397 498669751 498669837 2.310000e-19 108.0
80 TraesCS4B01G178000 chr5D 96.875 32 0 1 3102 3133 104096090 104096120 1.100000e-02 52.8
81 TraesCS4B01G178000 chr5A 87.770 139 17 0 3216 3354 208747398 208747536 4.860000e-36 163.0
82 TraesCS4B01G178000 chr5A 92.079 101 4 4 623 722 650138210 650138113 8.180000e-29 139.0
83 TraesCS4B01G178000 chr5A 87.097 62 6 2 4486 4545 492039940 492039879 1.090000e-07 69.4
84 TraesCS4B01G178000 chr5A 81.176 85 12 4 5932 6012 3530049 3530133 1.410000e-06 65.8
85 TraesCS4B01G178000 chr5A 93.182 44 2 1 3087 3130 374910985 374910943 5.070000e-06 63.9
86 TraesCS4B01G178000 chr5A 91.111 45 3 1 3087 3130 290685856 290685812 6.550000e-05 60.2
87 TraesCS4B01G178000 chr5A 85.000 60 5 4 3084 3142 481688217 481688161 2.360000e-04 58.4
88 TraesCS4B01G178000 chr1D 97.778 90 2 0 643 732 342187432 342187343 8.120000e-34 156.0
89 TraesCS4B01G178000 chr1D 96.667 90 2 1 643 732 37213512 37213424 1.360000e-31 148.0
90 TraesCS4B01G178000 chr1D 94.048 84 5 0 4192 4275 468178048 468177965 1.770000e-25 128.0
91 TraesCS4B01G178000 chr1D 91.667 84 4 3 4314 4396 86107066 86107147 4.960000e-21 113.0
92 TraesCS4B01G178000 chr1D 94.286 70 3 1 5097 5165 377006979 377006910 8.300000e-19 106.0
93 TraesCS4B01G178000 chr1D 93.478 46 3 0 6008 6053 62864415 62864460 1.090000e-07 69.4
94 TraesCS4B01G178000 chr1D 92.500 40 3 0 5624 5663 375206622 375206583 2.360000e-04 58.4
95 TraesCS4B01G178000 chr1A 98.810 84 0 1 643 725 553982921 553982838 1.360000e-31 148.0
96 TraesCS4B01G178000 chr1A 95.556 90 4 0 643 732 441929861 441929772 1.760000e-30 145.0
97 TraesCS4B01G178000 chr1A 90.000 50 5 0 3086 3135 575194013 575194062 1.410000e-06 65.8
98 TraesCS4B01G178000 chr1A 86.667 60 4 4 4486 4545 200248969 200248914 5.070000e-06 63.9
99 TraesCS4B01G178000 chr1A 90.698 43 4 0 5971 6013 80491685 80491727 2.360000e-04 58.4
100 TraesCS4B01G178000 chr5B 93.023 86 2 4 4314 4395 462131274 462131189 8.240000e-24 122.0
101 TraesCS4B01G178000 chr5B 85.106 94 11 2 5071 5161 89636066 89636159 6.460000e-15 93.5
102 TraesCS4B01G178000 chr5B 97.619 42 1 0 6012 6053 696964441 696964400 8.420000e-09 73.1
103 TraesCS4B01G178000 chr5B 95.000 40 1 1 3103 3142 496814998 496815036 1.820000e-05 62.1
104 TraesCS4B01G178000 chrUn 94.805 77 4 0 4202 4278 231106788 231106712 2.960000e-23 121.0
105 TraesCS4B01G178000 chrUn 92.593 81 5 1 4317 4396 110687410 110687490 1.380000e-21 115.0
106 TraesCS4B01G178000 chrUn 91.071 56 2 3 3087 3142 336947083 336947031 8.420000e-09 73.1
107 TraesCS4B01G178000 chrUn 93.478 46 3 0 6008 6053 214477677 214477722 1.090000e-07 69.4
108 TraesCS4B01G178000 chrUn 94.737 38 2 0 5975 6012 332851718 332851681 6.550000e-05 60.2
109 TraesCS4B01G178000 chr3A 90.123 81 6 2 5094 5173 724384293 724384372 2.980000e-18 104.0
110 TraesCS4B01G178000 chr3A 86.517 89 6 5 5097 5182 686191278 686191193 6.460000e-15 93.5
111 TraesCS4B01G178000 chr6A 80.734 109 10 10 3072 3179 235028692 235028790 2.340000e-09 75.0
112 TraesCS4B01G178000 chr6A 93.478 46 3 0 6008 6053 484569496 484569541 1.090000e-07 69.4
113 TraesCS4B01G178000 chr6A 100.000 29 0 0 3102 3130 176352527 176352555 3.000000e-03 54.7
114 TraesCS4B01G178000 chr3D 94.444 36 2 0 3098 3133 103452738 103452703 8.480000e-04 56.5
115 TraesCS4B01G178000 chr3D 96.970 33 0 1 3106 3138 523837196 523837165 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G178000 chr4B 389113124 389119177 6053 False 11180.00 11180 100.000000 1 6054 1 chr4B.!!$F2 6053
1 TraesCS4B01G178000 chr4B 28628214 28629106 892 False 1334.00 1334 93.757000 1833 2720 1 chr4B.!!$F1 887
2 TraesCS4B01G178000 chr4D 312563192 312568146 4954 False 1752.75 3565 93.476250 1 5924 4 chr4D.!!$F5 5923
3 TraesCS4B01G178000 chr7D 35545532 35546421 889 False 1387.00 1387 94.849000 1833 2720 1 chr7D.!!$F1 887
4 TraesCS4B01G178000 chr1B 30464221 30465102 881 True 1354.00 1354 94.457000 1842 2720 1 chr1B.!!$R1 878
5 TraesCS4B01G178000 chr3B 578585836 578586725 889 True 1341.00 1341 93.939000 1834 2720 1 chr3B.!!$R6 886
6 TraesCS4B01G178000 chr3B 821812232 821813125 893 False 1327.00 1327 93.527000 1831 2720 1 chr3B.!!$F2 889
7 TraesCS4B01G178000 chr2A 673033139 673034031 892 False 1339.00 1339 93.764000 1828 2720 1 chr2A.!!$F3 892
8 TraesCS4B01G178000 chr4A 163913011 163919492 6481 True 723.50 1336 90.642625 2 5931 8 chr4A.!!$R2 5929
9 TraesCS4B01G178000 chr2B 713532597 713533479 882 False 1330.00 1330 93.834000 1834 2720 1 chr2B.!!$F2 886
10 TraesCS4B01G178000 chr7B 581377750 581378641 891 False 1328.00 1328 93.631000 1831 2718 1 chr7B.!!$F3 887
11 TraesCS4B01G178000 chr2D 18758896 18759781 885 True 1327.00 1327 93.799000 1830 2710 1 chr2D.!!$R2 880

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
963 1278 0.179097 AATTTCTCGCTCGCCTCCTC 60.179 55.000 0.00 0.00 0.00 3.71 F
2737 3114 0.178990 GGTCCCTTTCTGGCAACTGT 60.179 55.000 0.00 0.00 36.78 3.55 F
2806 3183 0.318120 GTGTGGGCAAAATCTGTGGG 59.682 55.000 0.00 0.00 0.00 4.61 F
2808 3185 1.152376 TGGGCAAAATCTGTGGGCA 60.152 52.632 0.00 0.00 0.00 5.36 F
2907 3284 1.206132 CATCTGTGTTGGCATTGGCAT 59.794 47.619 14.21 0.00 43.71 4.40 F
3590 5651 2.302157 AGGTAAAGGAGCTGCGTTAAGT 59.698 45.455 14.61 3.27 33.53 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2804 3181 0.032952 CTGCATTATGCCACATGCCC 59.967 55.000 15.06 0.00 44.49 5.36 R
3590 5651 0.035534 CCCCATGATGAACACCGACA 60.036 55.000 0.00 0.00 0.00 4.35 R
4794 6985 0.321919 CTGCTGCTTGCTCCTTGGTA 60.322 55.000 0.00 0.00 43.37 3.25 R
4808 6999 8.330302 CCTTTTTGTTCTTGTTTTTATCTGCTG 58.670 33.333 0.00 0.00 0.00 4.41 R
4912 7106 4.026052 AGAACCTAAATTCAAGCCCATGG 58.974 43.478 4.14 4.14 0.00 3.66 R
5067 7264 0.255033 ATTTGGGACGGAGGTAAGGC 59.745 55.000 0.00 0.00 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 0.622665 AACTGGGCTGGAGAATGAGG 59.377 55.000 0.00 0.00 0.00 3.86
134 135 3.446516 AGACGGTACTTACATCTGGTTCC 59.553 47.826 0.00 0.00 0.00 3.62
137 138 3.430374 CGGTACTTACATCTGGTTCCCTG 60.430 52.174 0.00 0.00 0.00 4.45
205 206 5.668558 GACTTGTTGTCAGTAACCGAAAT 57.331 39.130 0.00 0.00 44.73 2.17
206 207 6.056428 GACTTGTTGTCAGTAACCGAAATT 57.944 37.500 0.00 0.00 44.73 1.82
207 208 6.056428 ACTTGTTGTCAGTAACCGAAATTC 57.944 37.500 0.00 0.00 0.00 2.17
208 209 5.587043 ACTTGTTGTCAGTAACCGAAATTCA 59.413 36.000 0.00 0.00 0.00 2.57
210 211 6.627395 TGTTGTCAGTAACCGAAATTCAAT 57.373 33.333 0.00 0.00 0.00 2.57
212 213 7.136119 TGTTGTCAGTAACCGAAATTCAATTC 58.864 34.615 0.00 0.00 0.00 2.17
226 234 7.409661 CGAAATTCAATTCAGAATTGTTCCGTG 60.410 37.037 27.79 15.42 44.96 4.94
268 277 4.749099 TGGTGCTTGTAAATTGCAATGTTC 59.251 37.500 13.82 5.95 38.50 3.18
370 379 1.951209 TGAGCCTTGTACTGGATCCA 58.049 50.000 15.27 15.27 39.07 3.41
482 491 8.863049 CAAGTATGTGAATACAAAAAGGAATGC 58.137 33.333 0.00 0.00 40.84 3.56
498 507 1.890876 ATGCGATAGACGAGAGAGCT 58.109 50.000 0.00 0.00 45.77 4.09
566 576 1.931172 GCCGTGTGTGGATGTATACAC 59.069 52.381 7.96 0.14 45.57 2.90
638 650 8.439286 GTTCAGACTCTAAAGCTTAAGAACATG 58.561 37.037 6.67 0.00 33.72 3.21
788 1084 3.181533 GCGTCCTTCAAACGACAGTATTC 60.182 47.826 0.00 0.00 42.62 1.75
811 1107 8.948853 TTCACAAACATGTCGAAAATATTCTC 57.051 30.769 0.00 0.00 33.17 2.87
812 1108 7.526608 TCACAAACATGTCGAAAATATTCTCC 58.473 34.615 0.00 0.00 33.17 3.71
813 1109 6.465781 CACAAACATGTCGAAAATATTCTCCG 59.534 38.462 0.00 0.00 33.17 4.63
814 1110 6.370442 ACAAACATGTCGAAAATATTCTCCGA 59.630 34.615 0.00 0.00 33.17 4.55
815 1111 7.065803 ACAAACATGTCGAAAATATTCTCCGAT 59.934 33.333 0.00 0.00 33.17 4.18
816 1112 6.530913 ACATGTCGAAAATATTCTCCGATG 57.469 37.500 0.00 7.58 33.17 3.84
817 1113 5.050091 ACATGTCGAAAATATTCTCCGATGC 60.050 40.000 0.00 0.00 33.17 3.91
818 1114 4.693283 TGTCGAAAATATTCTCCGATGCT 58.307 39.130 9.09 0.00 33.17 3.79
819 1115 4.745125 TGTCGAAAATATTCTCCGATGCTC 59.255 41.667 9.09 0.55 33.17 4.26
820 1116 4.150804 GTCGAAAATATTCTCCGATGCTCC 59.849 45.833 9.09 0.00 33.17 4.70
821 1117 3.433615 CGAAAATATTCTCCGATGCTCCC 59.566 47.826 0.00 0.00 33.17 4.30
822 1118 4.646572 GAAAATATTCTCCGATGCTCCCT 58.353 43.478 0.00 0.00 32.57 4.20
823 1119 3.971245 AATATTCTCCGATGCTCCCTC 57.029 47.619 0.00 0.00 0.00 4.30
824 1120 2.685106 TATTCTCCGATGCTCCCTCT 57.315 50.000 0.00 0.00 0.00 3.69
825 1121 1.047002 ATTCTCCGATGCTCCCTCTG 58.953 55.000 0.00 0.00 0.00 3.35
826 1122 1.680522 TTCTCCGATGCTCCCTCTGC 61.681 60.000 0.00 0.00 0.00 4.26
827 1123 3.496875 CTCCGATGCTCCCTCTGCG 62.497 68.421 0.00 0.00 0.00 5.18
828 1124 3.531207 CCGATGCTCCCTCTGCGA 61.531 66.667 0.00 0.00 0.00 5.10
829 1125 2.027314 CGATGCTCCCTCTGCGAG 59.973 66.667 0.00 0.00 0.00 5.03
878 1193 0.612174 GGTTTCCTCCTTCCTTGGCC 60.612 60.000 0.00 0.00 0.00 5.36
963 1278 0.179097 AATTTCTCGCTCGCCTCCTC 60.179 55.000 0.00 0.00 0.00 3.71
965 1280 3.938637 TTCTCGCTCGCCTCCTCCA 62.939 63.158 0.00 0.00 0.00 3.86
966 1281 3.222855 CTCGCTCGCCTCCTCCAT 61.223 66.667 0.00 0.00 0.00 3.41
980 1295 1.407437 CCTCCATATAATCCCGGCAGC 60.407 57.143 0.00 0.00 0.00 5.25
981 1296 1.556911 CTCCATATAATCCCGGCAGCT 59.443 52.381 0.00 0.00 0.00 4.24
992 1311 1.684386 CCGGCAGCTGGAGAATCTCT 61.684 60.000 16.28 0.00 33.73 3.10
993 1312 0.249405 CGGCAGCTGGAGAATCTCTC 60.249 60.000 17.12 2.06 42.66 3.20
994 1313 0.249405 GGCAGCTGGAGAATCTCTCG 60.249 60.000 17.12 2.90 44.28 4.04
995 1314 0.875474 GCAGCTGGAGAATCTCTCGC 60.875 60.000 17.12 12.25 44.28 5.03
996 1315 0.594540 CAGCTGGAGAATCTCTCGCG 60.595 60.000 10.38 0.00 44.28 5.87
997 1316 1.299773 GCTGGAGAATCTCTCGCGG 60.300 63.158 6.13 0.00 44.28 6.46
1272 1613 1.448717 GTTCCTCTTCGCCTGGCTC 60.449 63.158 17.92 0.00 0.00 4.70
1417 1758 0.522180 TCGCTCTGTCTCGTCCTTTC 59.478 55.000 0.00 0.00 0.00 2.62
1426 1767 3.692101 TGTCTCGTCCTTTCATCTCTCTC 59.308 47.826 0.00 0.00 0.00 3.20
1427 1768 3.945285 GTCTCGTCCTTTCATCTCTCTCT 59.055 47.826 0.00 0.00 0.00 3.10
1428 1769 4.035208 GTCTCGTCCTTTCATCTCTCTCTC 59.965 50.000 0.00 0.00 0.00 3.20
1429 1770 4.080582 TCTCGTCCTTTCATCTCTCTCTCT 60.081 45.833 0.00 0.00 0.00 3.10
1430 1771 4.196193 TCGTCCTTTCATCTCTCTCTCTC 58.804 47.826 0.00 0.00 0.00 3.20
1431 1772 4.080582 TCGTCCTTTCATCTCTCTCTCTCT 60.081 45.833 0.00 0.00 0.00 3.10
1432 1773 4.273480 CGTCCTTTCATCTCTCTCTCTCTC 59.727 50.000 0.00 0.00 0.00 3.20
1433 1774 5.440610 GTCCTTTCATCTCTCTCTCTCTCT 58.559 45.833 0.00 0.00 0.00 3.10
1434 1775 5.529060 GTCCTTTCATCTCTCTCTCTCTCTC 59.471 48.000 0.00 0.00 0.00 3.20
1435 1776 5.429762 TCCTTTCATCTCTCTCTCTCTCTCT 59.570 44.000 0.00 0.00 0.00 3.10
1436 1777 5.762218 CCTTTCATCTCTCTCTCTCTCTCTC 59.238 48.000 0.00 0.00 0.00 3.20
1437 1778 6.409005 CCTTTCATCTCTCTCTCTCTCTCTCT 60.409 46.154 0.00 0.00 0.00 3.10
1438 1779 7.202038 CCTTTCATCTCTCTCTCTCTCTCTCTA 60.202 44.444 0.00 0.00 0.00 2.43
1439 1780 7.862274 TTCATCTCTCTCTCTCTCTCTCTAT 57.138 40.000 0.00 0.00 0.00 1.98
1440 1781 8.956446 TTCATCTCTCTCTCTCTCTCTCTATA 57.044 38.462 0.00 0.00 0.00 1.31
1441 1782 9.552695 TTCATCTCTCTCTCTCTCTCTCTATAT 57.447 37.037 0.00 0.00 0.00 0.86
1493 1847 4.329462 ACTTGAGACTTGAGAGGAACAC 57.671 45.455 0.00 0.00 0.00 3.32
1521 1875 2.751166 TCTTTTCAAGAGAGGAGCCG 57.249 50.000 0.00 0.00 32.71 5.52
1540 1894 2.231478 CCGTCACAATCTGACCAGTACT 59.769 50.000 0.00 0.00 46.01 2.73
1541 1895 3.502920 CGTCACAATCTGACCAGTACTC 58.497 50.000 0.00 0.00 46.01 2.59
1542 1896 3.673594 CGTCACAATCTGACCAGTACTCC 60.674 52.174 0.00 0.00 46.01 3.85
1543 1897 3.511934 GTCACAATCTGACCAGTACTCCT 59.488 47.826 0.00 0.00 43.35 3.69
1544 1898 4.705507 GTCACAATCTGACCAGTACTCCTA 59.294 45.833 0.00 0.00 43.35 2.94
1545 1899 4.705507 TCACAATCTGACCAGTACTCCTAC 59.294 45.833 0.00 0.00 0.00 3.18
1633 1987 4.230657 GTTGCTACTCTATGCTACCATCG 58.769 47.826 0.00 0.00 32.85 3.84
1637 1991 4.156922 GCTACTCTATGCTACCATCGACAT 59.843 45.833 0.00 0.00 32.85 3.06
1638 1992 4.511617 ACTCTATGCTACCATCGACATG 57.488 45.455 0.00 0.00 32.85 3.21
1644 1998 2.613595 TGCTACCATCGACATGCATTTC 59.386 45.455 0.00 0.00 0.00 2.17
1659 2015 6.095300 ACATGCATTTCTTCGATATTGGACAA 59.905 34.615 0.00 0.00 0.00 3.18
1704 2064 0.835941 AAGTGGTGCCAAAATGCCAA 59.164 45.000 0.00 0.00 32.26 4.52
1721 2081 3.890756 TGCCAAAATCTGAACATGACACT 59.109 39.130 0.00 0.00 0.00 3.55
1894 2262 8.048514 AGTACAAAGTAGTTTGACCCTTACAAA 58.951 33.333 26.12 0.00 45.22 2.83
1938 2306 4.884961 AGGACCATGAACACCTAGAGTAT 58.115 43.478 0.00 0.00 0.00 2.12
1973 2345 0.616111 ACACAAGATCTCCGGAGCCT 60.616 55.000 27.39 21.51 0.00 4.58
2013 2385 0.687354 TTGAGAGAAGACCCCTGCAC 59.313 55.000 0.00 0.00 0.00 4.57
2016 2388 0.768221 AGAGAAGACCCCTGCACCAA 60.768 55.000 0.00 0.00 0.00 3.67
2111 2483 0.249868 TCTTGACACCAACGCTGAGG 60.250 55.000 0.00 0.00 0.00 3.86
2305 2677 3.645687 AGAGGAAGAAGAAGAACAGCAGT 59.354 43.478 0.00 0.00 0.00 4.40
2462 2834 2.759973 CCCGCTGGCTCCTAGACA 60.760 66.667 0.00 0.00 0.00 3.41
2722 3099 3.505464 CGATCCTATAATCGTGGGTCC 57.495 52.381 0.00 0.00 42.73 4.46
2723 3100 2.165845 CGATCCTATAATCGTGGGTCCC 59.834 54.545 0.00 0.00 42.73 4.46
2724 3101 3.442076 GATCCTATAATCGTGGGTCCCT 58.558 50.000 10.00 0.00 0.00 4.20
2725 3102 3.339713 TCCTATAATCGTGGGTCCCTT 57.660 47.619 10.00 0.00 0.00 3.95
2726 3103 3.660959 TCCTATAATCGTGGGTCCCTTT 58.339 45.455 10.00 0.60 0.00 3.11
2727 3104 3.644738 TCCTATAATCGTGGGTCCCTTTC 59.355 47.826 10.00 0.00 0.00 2.62
2728 3105 3.646637 CCTATAATCGTGGGTCCCTTTCT 59.353 47.826 10.00 0.00 0.00 2.52
2729 3106 3.560636 ATAATCGTGGGTCCCTTTCTG 57.439 47.619 10.00 0.00 0.00 3.02
2730 3107 0.328258 AATCGTGGGTCCCTTTCTGG 59.672 55.000 10.00 0.00 0.00 3.86
2731 3108 2.198304 ATCGTGGGTCCCTTTCTGGC 62.198 60.000 10.00 0.00 0.00 4.85
2732 3109 2.843545 GTGGGTCCCTTTCTGGCA 59.156 61.111 10.00 0.00 0.00 4.92
2733 3110 1.152830 GTGGGTCCCTTTCTGGCAA 59.847 57.895 10.00 0.00 0.00 4.52
2734 3111 1.152830 TGGGTCCCTTTCTGGCAAC 59.847 57.895 10.00 0.00 0.00 4.17
2735 3112 1.360393 TGGGTCCCTTTCTGGCAACT 61.360 55.000 10.00 0.00 37.61 3.16
2736 3113 0.895559 GGGTCCCTTTCTGGCAACTG 60.896 60.000 0.00 0.00 37.61 3.16
2737 3114 0.178990 GGTCCCTTTCTGGCAACTGT 60.179 55.000 0.00 0.00 36.78 3.55
2738 3115 0.954452 GTCCCTTTCTGGCAACTGTG 59.046 55.000 0.00 0.00 36.78 3.66
2739 3116 0.550914 TCCCTTTCTGGCAACTGTGT 59.449 50.000 0.00 0.00 36.78 3.72
2740 3117 1.064017 TCCCTTTCTGGCAACTGTGTT 60.064 47.619 0.00 0.00 36.78 3.32
2741 3118 2.173782 TCCCTTTCTGGCAACTGTGTTA 59.826 45.455 0.00 0.00 36.78 2.41
2742 3119 2.955660 CCCTTTCTGGCAACTGTGTTAA 59.044 45.455 0.00 0.00 36.78 2.01
2743 3120 3.004734 CCCTTTCTGGCAACTGTGTTAAG 59.995 47.826 0.00 0.00 36.78 1.85
2744 3121 3.632145 CCTTTCTGGCAACTGTGTTAAGT 59.368 43.478 0.00 0.00 36.78 2.24
2745 3122 4.097892 CCTTTCTGGCAACTGTGTTAAGTT 59.902 41.667 0.00 0.00 41.08 2.66
2746 3123 5.394115 CCTTTCTGGCAACTGTGTTAAGTTT 60.394 40.000 0.00 0.00 38.34 2.66
2747 3124 5.652994 TTCTGGCAACTGTGTTAAGTTTT 57.347 34.783 0.00 0.00 38.34 2.43
2748 3125 5.652994 TCTGGCAACTGTGTTAAGTTTTT 57.347 34.783 0.00 0.00 38.34 1.94
2749 3126 6.761099 TCTGGCAACTGTGTTAAGTTTTTA 57.239 33.333 0.00 0.00 38.34 1.52
2750 3127 6.557110 TCTGGCAACTGTGTTAAGTTTTTAC 58.443 36.000 0.00 0.00 38.34 2.01
2751 3128 6.376018 TCTGGCAACTGTGTTAAGTTTTTACT 59.624 34.615 0.00 0.00 38.34 2.24
2752 3129 7.553402 TCTGGCAACTGTGTTAAGTTTTTACTA 59.447 33.333 0.00 0.00 38.34 1.82
2753 3130 8.053026 TGGCAACTGTGTTAAGTTTTTACTAA 57.947 30.769 0.00 0.00 38.34 2.24
2754 3131 8.521176 TGGCAACTGTGTTAAGTTTTTACTAAA 58.479 29.630 0.00 0.00 38.34 1.85
2755 3132 9.016623 GGCAACTGTGTTAAGTTTTTACTAAAG 57.983 33.333 0.00 0.00 38.34 1.85
2756 3133 9.016623 GCAACTGTGTTAAGTTTTTACTAAAGG 57.983 33.333 0.00 0.00 38.34 3.11
2781 3158 5.774498 AAAGAACAGAAAGGCTTTGTAGG 57.226 39.130 18.79 5.05 0.00 3.18
2796 3173 3.510531 TGTAGGTAATTGTGTGGGCAA 57.489 42.857 0.00 0.00 0.00 4.52
2797 3174 3.833732 TGTAGGTAATTGTGTGGGCAAA 58.166 40.909 0.00 0.00 31.63 3.68
2798 3175 4.215908 TGTAGGTAATTGTGTGGGCAAAA 58.784 39.130 0.00 0.00 31.63 2.44
2799 3176 4.835615 TGTAGGTAATTGTGTGGGCAAAAT 59.164 37.500 0.00 0.00 34.15 1.82
2800 3177 4.535526 AGGTAATTGTGTGGGCAAAATC 57.464 40.909 0.00 0.00 31.63 2.17
2801 3178 4.159557 AGGTAATTGTGTGGGCAAAATCT 58.840 39.130 0.00 0.00 31.63 2.40
2802 3179 4.021192 AGGTAATTGTGTGGGCAAAATCTG 60.021 41.667 0.00 0.00 31.63 2.90
2803 3180 4.262420 GGTAATTGTGTGGGCAAAATCTGT 60.262 41.667 0.00 0.00 31.63 3.41
2804 3181 2.886862 TTGTGTGGGCAAAATCTGTG 57.113 45.000 0.00 0.00 0.00 3.66
2805 3182 1.039068 TGTGTGGGCAAAATCTGTGG 58.961 50.000 0.00 0.00 0.00 4.17
2806 3183 0.318120 GTGTGGGCAAAATCTGTGGG 59.682 55.000 0.00 0.00 0.00 4.61
2807 3184 1.293179 GTGGGCAAAATCTGTGGGC 59.707 57.895 0.00 0.00 0.00 5.36
2808 3185 1.152376 TGGGCAAAATCTGTGGGCA 60.152 52.632 0.00 0.00 0.00 5.36
2907 3284 1.206132 CATCTGTGTTGGCATTGGCAT 59.794 47.619 14.21 0.00 43.71 4.40
2928 3307 8.093307 TGGCATGTAGATGATTTCTAGAGATTC 58.907 37.037 3.61 0.00 37.62 2.52
2929 3308 8.313292 GGCATGTAGATGATTTCTAGAGATTCT 58.687 37.037 3.61 0.62 37.62 2.40
3171 3552 5.175388 AGTATGTTACAAGGGGAAAGGAC 57.825 43.478 0.00 0.00 0.00 3.85
3269 5330 5.546621 TTACAGGTTGCTATCTATCCACC 57.453 43.478 0.00 0.00 0.00 4.61
3270 5331 3.384168 ACAGGTTGCTATCTATCCACCA 58.616 45.455 0.00 0.00 0.00 4.17
3590 5651 2.302157 AGGTAAAGGAGCTGCGTTAAGT 59.698 45.455 14.61 3.27 33.53 2.24
4024 6191 7.699391 GTGAAATGTTCATATCATCCAAGTGTG 59.301 37.037 0.00 0.00 42.47 3.82
4191 6358 5.527582 ACCAACTAACAGTTTGACAGATGTC 59.472 40.000 6.01 6.01 39.84 3.06
4349 6540 7.929785 TCCGTCCCATAATATAAGAACTGTTTC 59.070 37.037 0.00 0.00 0.00 2.78
4368 6559 8.077386 ACTGTTTCAGTTTGAAAAACGTTCTTA 58.923 29.630 0.00 0.00 46.53 2.10
4384 6575 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
4385 6576 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
4386 6577 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
4387 6578 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4403 6594 5.163343 CGGAGGGAGTACTTTTTATGATGGA 60.163 44.000 0.00 0.00 0.00 3.41
4477 6668 4.675510 ACAGTCAAACTTGCACTCATTTG 58.324 39.130 0.00 0.00 34.11 2.32
4482 6673 5.964758 TCAAACTTGCACTCATTTGACTTT 58.035 33.333 8.87 0.00 36.42 2.66
4563 6754 7.540745 AGTGATAAACCATGAATGCGTTTTTAC 59.459 33.333 12.18 9.98 34.92 2.01
4618 6809 8.792830 TTTAGCTTGCTACATCTAATTCTTGT 57.207 30.769 1.37 0.00 0.00 3.16
4794 6985 9.293404 GTTACCTTCTTAACTAAACCCAAGAAT 57.707 33.333 0.00 0.00 36.65 2.40
4808 6999 2.424956 CCAAGAATACCAAGGAGCAAGC 59.575 50.000 0.00 0.00 0.00 4.01
4912 7106 2.359975 CGCCTGGGTTGAAGTCCC 60.360 66.667 0.00 0.00 44.81 4.46
4918 7112 1.000359 GGGTTGAAGTCCCCATGGG 60.000 63.158 25.30 25.30 46.11 4.00
5039 7236 8.845413 GAGCAAGAACTCCAGATCATATTATT 57.155 34.615 0.00 0.00 0.00 1.40
5040 7237 9.935241 GAGCAAGAACTCCAGATCATATTATTA 57.065 33.333 0.00 0.00 0.00 0.98
5080 7421 0.458669 TTCATCGCCTTACCTCCGTC 59.541 55.000 0.00 0.00 0.00 4.79
5149 7490 9.355215 GACAAATCTAAGACGAGTAATTTGAGA 57.645 33.333 11.37 0.00 37.47 3.27
5152 7493 5.877031 TCTAAGACGAGTAATTTGAGACGG 58.123 41.667 0.00 0.00 0.00 4.79
5161 7502 4.645588 AGTAATTTGAGACGGAGGGAGTAG 59.354 45.833 0.00 0.00 0.00 2.57
5162 7503 2.599408 TTTGAGACGGAGGGAGTAGT 57.401 50.000 0.00 0.00 0.00 2.73
5163 7504 3.726557 TTTGAGACGGAGGGAGTAGTA 57.273 47.619 0.00 0.00 0.00 1.82
5236 7577 5.306678 AGGGAGGAGATGATACAACTCAATC 59.693 44.000 10.23 7.67 35.43 2.67
5274 7615 0.244721 CTCATCACCTGTCTCGCACA 59.755 55.000 0.00 0.00 0.00 4.57
5296 7637 6.753279 CACAGACTGACAATTGACATTTTGTT 59.247 34.615 16.86 5.47 36.25 2.83
5380 7721 3.695556 GTGTGGTCTAGGTCCTCTAGTTC 59.304 52.174 0.00 0.00 44.45 3.01
5402 7749 7.665974 AGTTCCTAGAAAACCAATCAGTTTAGG 59.334 37.037 0.00 0.00 39.00 2.69
5453 7812 4.478206 ACTCCTACATGAGTGGTGAATG 57.522 45.455 0.00 0.00 43.80 2.67
5458 7817 1.881973 ACATGAGTGGTGAATGCACAC 59.118 47.619 6.08 2.32 46.96 3.82
5537 7896 8.942338 CTGTTTCAACACCTATACAGCTATAA 57.058 34.615 0.00 0.00 34.70 0.98
5538 7897 9.378551 CTGTTTCAACACCTATACAGCTATAAA 57.621 33.333 0.00 0.00 34.70 1.40
5539 7898 9.727859 TGTTTCAACACCTATACAGCTATAAAA 57.272 29.630 0.00 0.00 33.17 1.52
5540 7899 9.983804 GTTTCAACACCTATACAGCTATAAAAC 57.016 33.333 0.00 0.00 0.00 2.43
5541 7900 9.953565 TTTCAACACCTATACAGCTATAAAACT 57.046 29.630 0.00 0.00 0.00 2.66
5542 7901 8.942338 TCAACACCTATACAGCTATAAAACTG 57.058 34.615 0.00 0.00 39.86 3.16
5543 7902 7.494625 TCAACACCTATACAGCTATAAAACTGC 59.505 37.037 0.00 0.00 37.42 4.40
5544 7903 7.125792 ACACCTATACAGCTATAAAACTGCT 57.874 36.000 0.00 0.00 37.42 4.24
5545 7904 8.246430 ACACCTATACAGCTATAAAACTGCTA 57.754 34.615 0.00 0.00 37.42 3.49
5546 7905 8.142551 ACACCTATACAGCTATAAAACTGCTAC 58.857 37.037 0.00 0.00 37.42 3.58
5547 7906 8.361139 CACCTATACAGCTATAAAACTGCTACT 58.639 37.037 0.00 0.00 37.42 2.57
5548 7907 8.578151 ACCTATACAGCTATAAAACTGCTACTC 58.422 37.037 0.00 0.00 37.42 2.59
5549 7908 8.030106 CCTATACAGCTATAAAACTGCTACTCC 58.970 40.741 0.00 0.00 37.42 3.85
5550 7909 5.024785 ACAGCTATAAAACTGCTACTCCC 57.975 43.478 0.00 0.00 37.42 4.30
5551 7910 4.717280 ACAGCTATAAAACTGCTACTCCCT 59.283 41.667 0.00 0.00 37.42 4.20
5552 7911 5.163395 ACAGCTATAAAACTGCTACTCCCTC 60.163 44.000 0.00 0.00 37.42 4.30
5553 7912 4.962995 AGCTATAAAACTGCTACTCCCTCA 59.037 41.667 0.00 0.00 35.05 3.86
5554 7913 5.425539 AGCTATAAAACTGCTACTCCCTCAA 59.574 40.000 0.00 0.00 35.05 3.02
5555 7914 6.100424 AGCTATAAAACTGCTACTCCCTCAAT 59.900 38.462 0.00 0.00 35.05 2.57
5556 7915 6.768381 GCTATAAAACTGCTACTCCCTCAATT 59.232 38.462 0.00 0.00 0.00 2.32
5557 7916 7.041712 GCTATAAAACTGCTACTCCCTCAATTC 60.042 40.741 0.00 0.00 0.00 2.17
5558 7917 4.640771 AAACTGCTACTCCCTCAATTCA 57.359 40.909 0.00 0.00 0.00 2.57
5559 7918 3.618690 ACTGCTACTCCCTCAATTCAC 57.381 47.619 0.00 0.00 0.00 3.18
5560 7919 3.177228 ACTGCTACTCCCTCAATTCACT 58.823 45.455 0.00 0.00 0.00 3.41
5561 7920 3.584848 ACTGCTACTCCCTCAATTCACTT 59.415 43.478 0.00 0.00 0.00 3.16
5562 7921 4.042187 ACTGCTACTCCCTCAATTCACTTT 59.958 41.667 0.00 0.00 0.00 2.66
5563 7922 4.985538 TGCTACTCCCTCAATTCACTTTT 58.014 39.130 0.00 0.00 0.00 2.27
5564 7923 4.761739 TGCTACTCCCTCAATTCACTTTTG 59.238 41.667 0.00 0.00 0.00 2.44
5565 7924 4.762251 GCTACTCCCTCAATTCACTTTTGT 59.238 41.667 0.00 0.00 0.00 2.83
5566 7925 5.938125 GCTACTCCCTCAATTCACTTTTGTA 59.062 40.000 0.00 0.00 0.00 2.41
5567 7926 6.430000 GCTACTCCCTCAATTCACTTTTGTAA 59.570 38.462 0.00 0.00 0.00 2.41
5568 7927 6.884280 ACTCCCTCAATTCACTTTTGTAAG 57.116 37.500 0.00 0.00 37.40 2.34
5569 7928 6.365520 ACTCCCTCAATTCACTTTTGTAAGT 58.634 36.000 0.00 0.00 45.40 2.24
5570 7929 6.486993 ACTCCCTCAATTCACTTTTGTAAGTC 59.513 38.462 0.00 0.00 42.67 3.01
5571 7930 6.361433 TCCCTCAATTCACTTTTGTAAGTCA 58.639 36.000 0.00 0.00 42.67 3.41
5572 7931 7.004086 TCCCTCAATTCACTTTTGTAAGTCAT 58.996 34.615 0.00 0.00 42.67 3.06
5573 7932 7.505585 TCCCTCAATTCACTTTTGTAAGTCATT 59.494 33.333 0.00 0.00 42.67 2.57
5574 7933 7.809806 CCCTCAATTCACTTTTGTAAGTCATTC 59.190 37.037 0.00 0.00 42.67 2.67
5575 7934 8.352201 CCTCAATTCACTTTTGTAAGTCATTCA 58.648 33.333 0.00 0.00 42.67 2.57
5576 7935 9.390795 CTCAATTCACTTTTGTAAGTCATTCAG 57.609 33.333 0.00 0.00 42.67 3.02
5577 7936 9.119418 TCAATTCACTTTTGTAAGTCATTCAGA 57.881 29.630 0.00 0.00 42.67 3.27
5578 7937 9.173939 CAATTCACTTTTGTAAGTCATTCAGAC 57.826 33.333 0.00 0.00 42.67 3.51
5591 7950 5.644644 GTCATTCAGACAGCTAAAAATGGG 58.355 41.667 0.00 0.00 46.77 4.00
5592 7951 4.158394 TCATTCAGACAGCTAAAAATGGGC 59.842 41.667 0.00 0.00 0.00 5.36
5593 7952 3.439857 TCAGACAGCTAAAAATGGGCT 57.560 42.857 0.00 0.00 36.70 5.19
5599 7958 4.996062 CAGCTAAAAATGGGCTGTTTTG 57.004 40.909 6.07 0.00 45.59 2.44
5600 7959 4.379652 CAGCTAAAAATGGGCTGTTTTGT 58.620 39.130 6.07 0.00 45.59 2.83
5601 7960 5.537188 CAGCTAAAAATGGGCTGTTTTGTA 58.463 37.500 6.07 0.00 45.59 2.41
5602 7961 5.405269 CAGCTAAAAATGGGCTGTTTTGTAC 59.595 40.000 6.07 0.00 45.59 2.90
5603 7962 5.069781 AGCTAAAAATGGGCTGTTTTGTACA 59.930 36.000 0.00 0.00 34.82 2.90
5604 7963 5.931724 GCTAAAAATGGGCTGTTTTGTACAT 59.068 36.000 0.00 0.00 35.85 2.29
5605 7964 6.426633 GCTAAAAATGGGCTGTTTTGTACATT 59.573 34.615 0.00 0.00 35.85 2.71
5606 7965 7.600752 GCTAAAAATGGGCTGTTTTGTACATTA 59.399 33.333 0.00 0.00 35.85 1.90
5607 7966 9.651913 CTAAAAATGGGCTGTTTTGTACATTAT 57.348 29.630 0.00 0.00 35.85 1.28
5608 7967 8.546597 AAAAATGGGCTGTTTTGTACATTATC 57.453 30.769 0.00 0.00 35.85 1.75
5609 7968 7.480760 AAATGGGCTGTTTTGTACATTATCT 57.519 32.000 0.00 0.00 35.85 1.98
5610 7969 5.895636 TGGGCTGTTTTGTACATTATCTG 57.104 39.130 0.00 0.00 35.85 2.90
5611 7970 5.565509 TGGGCTGTTTTGTACATTATCTGA 58.434 37.500 0.00 0.00 35.85 3.27
5612 7971 6.007076 TGGGCTGTTTTGTACATTATCTGAA 58.993 36.000 0.00 0.00 35.85 3.02
5613 7972 6.663093 TGGGCTGTTTTGTACATTATCTGAAT 59.337 34.615 0.00 0.00 35.85 2.57
5614 7973 7.178274 TGGGCTGTTTTGTACATTATCTGAATT 59.822 33.333 0.00 0.00 35.85 2.17
5615 7974 7.489113 GGGCTGTTTTGTACATTATCTGAATTG 59.511 37.037 0.00 0.00 35.85 2.32
5616 7975 8.028938 GGCTGTTTTGTACATTATCTGAATTGT 58.971 33.333 0.00 0.00 35.85 2.71
5617 7976 9.065871 GCTGTTTTGTACATTATCTGAATTGTC 57.934 33.333 0.00 0.00 35.85 3.18
5627 7986 9.512588 ACATTATCTGAATTGTCTTCAAAGTCT 57.487 29.630 0.00 0.00 37.11 3.24
5645 8004 9.231297 TCAAAGTCTTATAAAAGTGAATGGAGG 57.769 33.333 0.00 0.00 34.13 4.30
5646 8005 8.462016 CAAAGTCTTATAAAAGTGAATGGAGGG 58.538 37.037 0.00 0.00 34.13 4.30
5647 8006 7.510675 AGTCTTATAAAAGTGAATGGAGGGA 57.489 36.000 0.00 0.00 34.13 4.20
5648 8007 7.569240 AGTCTTATAAAAGTGAATGGAGGGAG 58.431 38.462 0.00 0.00 34.13 4.30
5694 8065 4.890158 TGGTTATCAGCAGAAACTCTCA 57.110 40.909 0.00 0.00 0.00 3.27
5715 8086 9.565213 CTCTCAAAATTAAAACTGATGGATGTC 57.435 33.333 0.00 0.00 0.00 3.06
5806 8183 2.507058 AGTTCAGCCATCCTGCTATCAA 59.493 45.455 0.00 0.00 40.32 2.57
5905 8284 6.088824 CCAATTCTGGAAGATTCGTTTGAAG 58.911 40.000 0.00 0.00 46.36 3.02
5915 8295 8.237267 GGAAGATTCGTTTGAAGTATTTCATGT 58.763 33.333 1.06 0.00 42.60 3.21
5926 8306 8.827177 TGAAGTATTTCATGTTATATCCCGTC 57.173 34.615 0.00 0.00 38.37 4.79
5933 8313 6.540438 TCATGTTATATCCCGTCTATTCCC 57.460 41.667 0.00 0.00 0.00 3.97
5934 8314 6.261435 TCATGTTATATCCCGTCTATTCCCT 58.739 40.000 0.00 0.00 0.00 4.20
5935 8315 6.380274 TCATGTTATATCCCGTCTATTCCCTC 59.620 42.308 0.00 0.00 0.00 4.30
5936 8316 5.021458 TGTTATATCCCGTCTATTCCCTCC 58.979 45.833 0.00 0.00 0.00 4.30
5937 8317 2.211250 TATCCCGTCTATTCCCTCCG 57.789 55.000 0.00 0.00 0.00 4.63
5938 8318 0.187851 ATCCCGTCTATTCCCTCCGT 59.812 55.000 0.00 0.00 0.00 4.69
5939 8319 0.466922 TCCCGTCTATTCCCTCCGTC 60.467 60.000 0.00 0.00 0.00 4.79
5940 8320 1.461911 CCCGTCTATTCCCTCCGTCC 61.462 65.000 0.00 0.00 0.00 4.79
5941 8321 1.461911 CCGTCTATTCCCTCCGTCCC 61.462 65.000 0.00 0.00 0.00 4.46
5942 8322 0.754217 CGTCTATTCCCTCCGTCCCA 60.754 60.000 0.00 0.00 0.00 4.37
5943 8323 1.492764 GTCTATTCCCTCCGTCCCAA 58.507 55.000 0.00 0.00 0.00 4.12
5944 8324 1.138464 GTCTATTCCCTCCGTCCCAAC 59.862 57.143 0.00 0.00 0.00 3.77
5945 8325 1.200519 CTATTCCCTCCGTCCCAACA 58.799 55.000 0.00 0.00 0.00 3.33
5946 8326 1.768870 CTATTCCCTCCGTCCCAACAT 59.231 52.381 0.00 0.00 0.00 2.71
5947 8327 1.887797 ATTCCCTCCGTCCCAACATA 58.112 50.000 0.00 0.00 0.00 2.29
5948 8328 1.659022 TTCCCTCCGTCCCAACATAA 58.341 50.000 0.00 0.00 0.00 1.90
5949 8329 1.200519 TCCCTCCGTCCCAACATAAG 58.799 55.000 0.00 0.00 0.00 1.73
5950 8330 0.909623 CCCTCCGTCCCAACATAAGT 59.090 55.000 0.00 0.00 0.00 2.24
5951 8331 1.406887 CCCTCCGTCCCAACATAAGTG 60.407 57.143 0.00 0.00 0.00 3.16
5952 8332 1.278127 CCTCCGTCCCAACATAAGTGT 59.722 52.381 0.00 0.00 41.28 3.55
5953 8333 2.618053 CTCCGTCCCAACATAAGTGTC 58.382 52.381 0.00 0.00 37.67 3.67
5954 8334 2.233922 CTCCGTCCCAACATAAGTGTCT 59.766 50.000 0.00 0.00 37.67 3.41
5955 8335 2.635915 TCCGTCCCAACATAAGTGTCTT 59.364 45.455 0.00 0.00 37.67 3.01
5956 8336 3.833650 TCCGTCCCAACATAAGTGTCTTA 59.166 43.478 0.00 0.00 37.67 2.10
5957 8337 4.283978 TCCGTCCCAACATAAGTGTCTTAA 59.716 41.667 0.00 0.00 37.67 1.85
5958 8338 4.630069 CCGTCCCAACATAAGTGTCTTAAG 59.370 45.833 0.00 0.00 37.67 1.85
5959 8339 4.092968 CGTCCCAACATAAGTGTCTTAAGC 59.907 45.833 0.00 0.00 37.67 3.09
5960 8340 5.246307 GTCCCAACATAAGTGTCTTAAGCT 58.754 41.667 0.00 0.00 37.67 3.74
5961 8341 5.705905 GTCCCAACATAAGTGTCTTAAGCTT 59.294 40.000 3.48 3.48 37.67 3.74
5962 8342 6.877322 GTCCCAACATAAGTGTCTTAAGCTTA 59.123 38.462 0.86 0.86 37.67 3.09
5963 8343 7.389607 GTCCCAACATAAGTGTCTTAAGCTTAA 59.610 37.037 17.71 17.71 37.67 1.85
5964 8344 8.107095 TCCCAACATAAGTGTCTTAAGCTTAAT 58.893 33.333 18.93 6.21 37.67 1.40
5965 8345 9.391006 CCCAACATAAGTGTCTTAAGCTTAATA 57.609 33.333 18.93 9.68 37.67 0.98
5970 8350 9.901724 CATAAGTGTCTTAAGCTTAATACAACG 57.098 33.333 28.72 14.31 33.43 4.10
5971 8351 7.958053 AAGTGTCTTAAGCTTAATACAACGT 57.042 32.000 28.72 20.32 33.43 3.99
5973 8353 8.458212 AGTGTCTTAAGCTTAATACAACGTAC 57.542 34.615 28.72 19.61 33.43 3.67
5974 8354 8.084073 AGTGTCTTAAGCTTAATACAACGTACA 58.916 33.333 28.72 15.98 33.43 2.90
5975 8355 8.702438 GTGTCTTAAGCTTAATACAACGTACAA 58.298 33.333 28.72 9.82 33.43 2.41
5976 8356 9.258826 TGTCTTAAGCTTAATACAACGTACAAA 57.741 29.630 26.34 7.81 30.09 2.83
5977 8357 9.737025 GTCTTAAGCTTAATACAACGTACAAAG 57.263 33.333 22.89 9.00 0.00 2.77
5978 8358 9.480053 TCTTAAGCTTAATACAACGTACAAAGT 57.520 29.630 18.93 0.00 0.00 2.66
5988 8368 2.914059 ACGTACAAAGTTGAGGCACTT 58.086 42.857 0.00 0.00 41.55 3.16
5989 8369 4.062677 ACGTACAAAGTTGAGGCACTTA 57.937 40.909 0.00 0.00 41.55 2.24
5990 8370 4.638304 ACGTACAAAGTTGAGGCACTTAT 58.362 39.130 0.00 0.00 41.55 1.73
5991 8371 5.061179 ACGTACAAAGTTGAGGCACTTATT 58.939 37.500 0.00 0.00 41.55 1.40
5992 8372 5.529800 ACGTACAAAGTTGAGGCACTTATTT 59.470 36.000 0.00 0.00 41.55 1.40
5993 8373 6.038936 ACGTACAAAGTTGAGGCACTTATTTT 59.961 34.615 0.00 0.00 41.55 1.82
5994 8374 6.359617 CGTACAAAGTTGAGGCACTTATTTTG 59.640 38.462 0.00 0.00 41.55 2.44
5995 8375 6.463995 ACAAAGTTGAGGCACTTATTTTGA 57.536 33.333 0.00 0.00 41.55 2.69
5996 8376 6.507023 ACAAAGTTGAGGCACTTATTTTGAG 58.493 36.000 0.00 0.00 41.55 3.02
5997 8377 6.321181 ACAAAGTTGAGGCACTTATTTTGAGA 59.679 34.615 0.00 0.00 41.55 3.27
5998 8378 5.948992 AGTTGAGGCACTTATTTTGAGAC 57.051 39.130 0.00 0.00 41.55 3.36
5999 8379 5.376625 AGTTGAGGCACTTATTTTGAGACA 58.623 37.500 0.00 0.00 41.55 3.41
6000 8380 5.827797 AGTTGAGGCACTTATTTTGAGACAA 59.172 36.000 0.00 0.00 41.55 3.18
6001 8381 6.321181 AGTTGAGGCACTTATTTTGAGACAAA 59.679 34.615 0.00 0.00 41.55 2.83
6002 8382 6.317789 TGAGGCACTTATTTTGAGACAAAG 57.682 37.500 0.00 0.00 41.55 2.77
6003 8383 5.241506 TGAGGCACTTATTTTGAGACAAAGG 59.758 40.000 0.00 0.00 41.55 3.11
6004 8384 4.524328 AGGCACTTATTTTGAGACAAAGGG 59.476 41.667 0.00 0.00 27.25 3.95
6005 8385 4.522789 GGCACTTATTTTGAGACAAAGGGA 59.477 41.667 0.00 0.00 0.00 4.20
6006 8386 5.335976 GGCACTTATTTTGAGACAAAGGGAG 60.336 44.000 0.00 0.00 0.00 4.30
6007 8387 5.241728 GCACTTATTTTGAGACAAAGGGAGT 59.758 40.000 0.00 0.00 0.00 3.85
6008 8388 6.430000 GCACTTATTTTGAGACAAAGGGAGTA 59.570 38.462 0.00 0.00 0.00 2.59
6009 8389 7.121315 GCACTTATTTTGAGACAAAGGGAGTAT 59.879 37.037 0.00 0.00 0.00 2.12
6010 8390 9.014297 CACTTATTTTGAGACAAAGGGAGTATT 57.986 33.333 0.00 0.00 0.00 1.89
6016 8396 9.444600 TTTTGAGACAAAGGGAGTATTACATAC 57.555 33.333 0.00 0.00 35.99 2.39
6039 8419 3.290948 CCCCCGTTCCAAAATAGATGA 57.709 47.619 0.00 0.00 0.00 2.92
6040 8420 3.832527 CCCCCGTTCCAAAATAGATGAT 58.167 45.455 0.00 0.00 0.00 2.45
6041 8421 3.821033 CCCCCGTTCCAAAATAGATGATC 59.179 47.826 0.00 0.00 0.00 2.92
6042 8422 3.821033 CCCCGTTCCAAAATAGATGATCC 59.179 47.826 0.00 0.00 0.00 3.36
6043 8423 4.460263 CCCGTTCCAAAATAGATGATCCA 58.540 43.478 0.00 0.00 0.00 3.41
6044 8424 4.887071 CCCGTTCCAAAATAGATGATCCAA 59.113 41.667 0.00 0.00 0.00 3.53
6045 8425 5.221048 CCCGTTCCAAAATAGATGATCCAAC 60.221 44.000 0.00 0.00 0.00 3.77
6046 8426 5.590259 CCGTTCCAAAATAGATGATCCAACT 59.410 40.000 0.00 0.00 0.00 3.16
6047 8427 6.095440 CCGTTCCAAAATAGATGATCCAACTT 59.905 38.462 0.00 0.00 0.00 2.66
6048 8428 7.362920 CCGTTCCAAAATAGATGATCCAACTTT 60.363 37.037 0.00 0.00 0.00 2.66
6049 8429 7.485913 CGTTCCAAAATAGATGATCCAACTTTG 59.514 37.037 0.00 0.00 0.00 2.77
6050 8430 8.306761 GTTCCAAAATAGATGATCCAACTTTGT 58.693 33.333 0.00 0.00 0.00 2.83
6051 8431 9.527157 TTCCAAAATAGATGATCCAACTTTGTA 57.473 29.630 0.00 0.00 0.00 2.41
6052 8432 8.956426 TCCAAAATAGATGATCCAACTTTGTAC 58.044 33.333 0.00 0.00 0.00 2.90
6053 8433 8.739039 CCAAAATAGATGATCCAACTTTGTACA 58.261 33.333 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 7.475840 GTCTTTATGGATCCAAATGTCTGAAC 58.524 38.462 20.67 5.00 0.00 3.18
137 138 0.179070 GGAAGGAGTTCTCATCCCGC 60.179 60.000 10.72 0.00 37.57 6.13
205 206 6.954455 CCAACACGGAACAATTCTGAATTGAA 60.954 38.462 36.62 0.00 43.62 2.69
206 207 5.507149 CCAACACGGAACAATTCTGAATTGA 60.507 40.000 36.62 0.00 43.62 2.57
207 208 4.681025 CCAACACGGAACAATTCTGAATTG 59.319 41.667 31.29 31.29 45.15 2.32
208 209 4.582656 TCCAACACGGAACAATTCTGAATT 59.417 37.500 9.76 9.76 42.52 2.17
210 211 3.546724 TCCAACACGGAACAATTCTGAA 58.453 40.909 4.42 0.00 42.52 3.02
226 234 5.109903 CACCACTACAGCTACTAATCCAAC 58.890 45.833 0.00 0.00 0.00 3.77
370 379 2.816411 TCAAACGAGGTGAGGGAGTAT 58.184 47.619 0.00 0.00 0.00 2.12
472 481 4.098044 TCTCTCGTCTATCGCATTCCTTTT 59.902 41.667 0.00 0.00 39.67 2.27
482 491 2.475111 GAGACAGCTCTCTCGTCTATCG 59.525 54.545 3.04 0.00 40.04 2.92
498 507 3.229293 TCATGTTTTGCATTGGGAGACA 58.771 40.909 0.00 0.00 35.19 3.41
566 576 4.336993 TGCCCTTTAACCTGCGTATTTATG 59.663 41.667 0.00 0.00 0.00 1.90
568 578 3.952931 TGCCCTTTAACCTGCGTATTTA 58.047 40.909 0.00 0.00 0.00 1.40
570 580 2.500392 TGCCCTTTAACCTGCGTATT 57.500 45.000 0.00 0.00 0.00 1.89
571 581 2.290705 ACTTGCCCTTTAACCTGCGTAT 60.291 45.455 0.00 0.00 0.00 3.06
572 582 1.072648 ACTTGCCCTTTAACCTGCGTA 59.927 47.619 0.00 0.00 0.00 4.42
619 629 6.536941 GGAGGACATGTTCTTAAGCTTTAGAG 59.463 42.308 8.41 6.59 0.00 2.43
620 630 6.407202 GGAGGACATGTTCTTAAGCTTTAGA 58.593 40.000 8.41 11.03 0.00 2.10
638 650 1.134551 ACCTAGACTACGACGGAGGAC 60.135 57.143 12.67 5.25 0.00 3.85
711 723 4.009798 CCAAAAACGGCAAAAAGTTTCC 57.990 40.909 0.00 0.00 39.36 3.13
774 1070 6.198687 ACATGTTTGTGAATACTGTCGTTTG 58.801 36.000 0.00 0.00 33.85 2.93
788 1084 6.465781 CGGAGAATATTTTCGACATGTTTGTG 59.534 38.462 0.00 0.00 35.79 3.33
811 1107 3.531207 TCGCAGAGGGAGCATCGG 61.531 66.667 0.00 0.00 34.37 4.18
822 1118 1.001624 CGTCAATGATTGCTCGCAGA 58.998 50.000 0.00 0.00 0.00 4.26
823 1119 0.588233 GCGTCAATGATTGCTCGCAG 60.588 55.000 27.79 8.80 45.35 5.18
824 1120 1.425031 GCGTCAATGATTGCTCGCA 59.575 52.632 27.79 1.98 45.35 5.10
825 1121 1.649348 CGCGTCAATGATTGCTCGC 60.649 57.895 25.17 25.17 43.94 5.03
826 1122 1.649348 GCGCGTCAATGATTGCTCG 60.649 57.895 8.43 14.51 0.00 5.03
827 1123 0.858961 GTGCGCGTCAATGATTGCTC 60.859 55.000 8.43 2.10 0.00 4.26
828 1124 1.135315 GTGCGCGTCAATGATTGCT 59.865 52.632 8.43 0.00 0.00 3.91
829 1125 1.869132 GGTGCGCGTCAATGATTGC 60.869 57.895 8.43 1.07 0.00 3.56
868 1183 2.747855 GCACGAGGGCCAAGGAAG 60.748 66.667 6.18 0.00 0.00 3.46
963 1278 1.679944 CCAGCTGCCGGGATTATATGG 60.680 57.143 8.66 0.28 0.00 2.74
965 1280 1.556911 CTCCAGCTGCCGGGATTATAT 59.443 52.381 8.66 0.00 34.73 0.86
966 1281 0.976641 CTCCAGCTGCCGGGATTATA 59.023 55.000 8.66 0.00 34.73 0.98
980 1295 0.030101 GACCGCGAGAGATTCTCCAG 59.970 60.000 8.23 5.92 40.34 3.86
981 1296 1.715862 CGACCGCGAGAGATTCTCCA 61.716 60.000 8.23 0.00 40.34 3.86
1345 1686 0.741915 GTGAAGAGGTAGAGGGCGAG 59.258 60.000 0.00 0.00 0.00 5.03
1540 1894 2.579624 TGGCCCTCAAATAGGTAGGA 57.420 50.000 0.00 0.00 44.90 2.94
1541 1895 4.536090 TCATATGGCCCTCAAATAGGTAGG 59.464 45.833 0.00 0.00 44.90 3.18
1542 1896 5.762179 TCATATGGCCCTCAAATAGGTAG 57.238 43.478 0.00 0.00 44.90 3.18
1543 1897 6.032039 AGATCATATGGCCCTCAAATAGGTA 58.968 40.000 0.00 0.00 44.90 3.08
1544 1898 4.854436 AGATCATATGGCCCTCAAATAGGT 59.146 41.667 0.00 0.00 44.90 3.08
1545 1899 5.447778 AGATCATATGGCCCTCAAATAGG 57.552 43.478 0.00 0.00 46.09 2.57
1633 1987 6.138761 GTCCAATATCGAAGAAATGCATGTC 58.861 40.000 9.00 9.00 43.58 3.06
1637 1991 5.647658 AGTTGTCCAATATCGAAGAAATGCA 59.352 36.000 0.00 0.00 43.58 3.96
1638 1992 6.124088 AGTTGTCCAATATCGAAGAAATGC 57.876 37.500 0.00 0.00 43.58 3.56
1644 1998 7.802738 TGTAACAAAGTTGTCCAATATCGAAG 58.197 34.615 0.00 0.00 41.31 3.79
1659 2015 0.666374 GCTGCCCGTTGTAACAAAGT 59.334 50.000 0.00 0.00 0.00 2.66
1704 2064 9.725019 TCAAATACTAGTGTCATGTTCAGATTT 57.275 29.630 5.39 0.00 0.00 2.17
1894 2262 3.865011 TGTGTTTGCATTTCAGTGTGT 57.135 38.095 0.00 0.00 0.00 3.72
1938 2306 8.375506 AGATCTTGTGTTATGGTTGTCTTAAGA 58.624 33.333 0.00 0.00 0.00 2.10
1973 2345 5.662657 TCAAGATTCAGGGATGATGACACTA 59.337 40.000 0.00 0.00 0.00 2.74
2013 2385 2.229784 GACTGGTTGCAGATCCTTTTGG 59.770 50.000 0.00 0.00 42.21 3.28
2016 2388 1.813513 CGACTGGTTGCAGATCCTTT 58.186 50.000 0.00 0.00 0.00 3.11
2111 2483 2.212110 GGATTGATGCCCATGCCCC 61.212 63.158 0.00 0.00 36.33 5.80
2120 2492 1.403249 GCAGGTGTGTTGGATTGATGC 60.403 52.381 0.00 0.00 0.00 3.91
2172 2544 1.028905 CGGAAGGGACACTTTTTGCA 58.971 50.000 0.00 0.00 40.21 4.08
2241 2613 4.868116 GCTTTGCCCGGGCGGATA 62.868 66.667 39.00 20.81 45.51 2.59
2305 2677 6.480763 TCTTCCTTGTTGGTATGATTTGCTA 58.519 36.000 0.00 0.00 37.07 3.49
2720 3097 0.550914 ACACAGTTGCCAGAAAGGGA 59.449 50.000 0.00 0.00 38.09 4.20
2721 3098 1.402787 AACACAGTTGCCAGAAAGGG 58.597 50.000 0.00 0.00 38.09 3.95
2722 3099 3.632145 ACTTAACACAGTTGCCAGAAAGG 59.368 43.478 0.00 0.00 41.84 3.11
2723 3100 4.900635 ACTTAACACAGTTGCCAGAAAG 57.099 40.909 0.00 0.00 0.00 2.62
2724 3101 5.652994 AAACTTAACACAGTTGCCAGAAA 57.347 34.783 0.00 0.00 37.07 2.52
2725 3102 5.652994 AAAACTTAACACAGTTGCCAGAA 57.347 34.783 0.00 0.00 37.07 3.02
2726 3103 5.652994 AAAAACTTAACACAGTTGCCAGA 57.347 34.783 0.00 0.00 37.07 3.86
2727 3104 6.560711 AGTAAAAACTTAACACAGTTGCCAG 58.439 36.000 0.00 0.00 37.07 4.85
2728 3105 6.518208 AGTAAAAACTTAACACAGTTGCCA 57.482 33.333 0.00 0.00 37.07 4.92
2729 3106 8.914328 TTTAGTAAAAACTTAACACAGTTGCC 57.086 30.769 0.00 0.00 37.07 4.52
2730 3107 9.016623 CCTTTAGTAAAAACTTAACACAGTTGC 57.983 33.333 0.00 0.00 37.07 4.17
2747 3124 9.227777 GCCTTTCTGTTCTTTATCCTTTAGTAA 57.772 33.333 0.00 0.00 0.00 2.24
2748 3125 8.603304 AGCCTTTCTGTTCTTTATCCTTTAGTA 58.397 33.333 0.00 0.00 0.00 1.82
2749 3126 7.462590 AGCCTTTCTGTTCTTTATCCTTTAGT 58.537 34.615 0.00 0.00 0.00 2.24
2750 3127 7.929941 AGCCTTTCTGTTCTTTATCCTTTAG 57.070 36.000 0.00 0.00 0.00 1.85
2751 3128 8.576442 CAAAGCCTTTCTGTTCTTTATCCTTTA 58.424 33.333 0.00 0.00 0.00 1.85
2752 3129 7.069950 ACAAAGCCTTTCTGTTCTTTATCCTTT 59.930 33.333 0.00 0.00 0.00 3.11
2753 3130 6.551227 ACAAAGCCTTTCTGTTCTTTATCCTT 59.449 34.615 0.00 0.00 0.00 3.36
2754 3131 6.071320 ACAAAGCCTTTCTGTTCTTTATCCT 58.929 36.000 0.00 0.00 0.00 3.24
2755 3132 6.332735 ACAAAGCCTTTCTGTTCTTTATCC 57.667 37.500 0.00 0.00 0.00 2.59
2756 3133 7.175119 ACCTACAAAGCCTTTCTGTTCTTTATC 59.825 37.037 0.00 0.00 0.00 1.75
2781 3158 4.685628 CACAGATTTTGCCCACACAATTAC 59.314 41.667 0.00 0.00 0.00 1.89
2796 3173 0.542467 TGCCACATGCCCACAGATTT 60.542 50.000 0.00 0.00 40.16 2.17
2797 3174 0.324923 ATGCCACATGCCCACAGATT 60.325 50.000 0.00 0.00 40.16 2.40
2798 3175 0.552363 TATGCCACATGCCCACAGAT 59.448 50.000 0.00 0.00 40.16 2.90
2799 3176 0.330941 TTATGCCACATGCCCACAGA 59.669 50.000 0.00 0.00 40.16 3.41
2800 3177 1.067974 CATTATGCCACATGCCCACAG 59.932 52.381 0.00 0.00 40.16 3.66
2801 3178 1.112950 CATTATGCCACATGCCCACA 58.887 50.000 0.00 0.00 40.16 4.17
2802 3179 0.249573 GCATTATGCCACATGCCCAC 60.250 55.000 5.80 0.00 40.04 4.61
2803 3180 0.686769 TGCATTATGCCACATGCCCA 60.687 50.000 15.06 0.00 44.49 5.36
2804 3181 0.032952 CTGCATTATGCCACATGCCC 59.967 55.000 15.06 0.00 44.49 5.36
2805 3182 0.748450 ACTGCATTATGCCACATGCC 59.252 50.000 15.06 0.00 44.49 4.40
2806 3183 2.620115 AGTACTGCATTATGCCACATGC 59.380 45.455 15.06 4.12 44.23 4.06
2807 3184 6.564709 AATAGTACTGCATTATGCCACATG 57.435 37.500 15.06 0.00 44.23 3.21
2808 3185 8.868522 ATTAATAGTACTGCATTATGCCACAT 57.131 30.769 15.06 0.09 44.23 3.21
2832 3209 5.593909 TGAAGTGACAAAATTGACCACAGAT 59.406 36.000 18.05 9.26 37.56 2.90
2833 3210 4.946772 TGAAGTGACAAAATTGACCACAGA 59.053 37.500 18.05 6.00 37.56 3.41
2928 3307 8.087136 ACACATGATATATGCTGTCTCTTGTAG 58.913 37.037 0.00 0.00 0.00 2.74
2929 3308 7.955918 ACACATGATATATGCTGTCTCTTGTA 58.044 34.615 0.00 0.00 0.00 2.41
2998 3378 3.411454 TCTGATGGTTCATCTCTCCCT 57.589 47.619 9.00 0.00 41.06 4.20
3146 3527 7.624478 TGTCCTTTCCCCTTGTAACATACTATA 59.376 37.037 0.00 0.00 0.00 1.31
3269 5330 2.602878 GCATGTTCATGCCTTTCACTG 58.397 47.619 22.42 0.00 41.47 3.66
3414 5475 7.673180 TCAGCCAAAGAGAAAAATGATCATTT 58.327 30.769 24.83 24.83 42.35 2.32
3415 5476 7.235935 TCAGCCAAAGAGAAAAATGATCATT 57.764 32.000 15.36 15.36 0.00 2.57
3416 5477 6.845758 TCAGCCAAAGAGAAAAATGATCAT 57.154 33.333 1.18 1.18 0.00 2.45
3417 5478 6.662234 AGATCAGCCAAAGAGAAAAATGATCA 59.338 34.615 12.74 0.00 42.59 2.92
3418 5479 6.973474 CAGATCAGCCAAAGAGAAAAATGATC 59.027 38.462 0.00 0.00 41.20 2.92
3419 5480 6.627508 GCAGATCAGCCAAAGAGAAAAATGAT 60.628 38.462 0.00 0.00 0.00 2.45
3452 5513 6.488006 AGATCCATAAATCAACATGGCTACAC 59.512 38.462 0.00 0.00 41.33 2.90
3590 5651 0.035534 CCCCATGATGAACACCGACA 60.036 55.000 0.00 0.00 0.00 4.35
4024 6191 4.685924 CCAAAGTTTGATATCACCATGGC 58.314 43.478 17.33 0.00 0.00 4.40
4080 6247 8.986847 CAAGAAAAATGTATGCATGTAAAACCA 58.013 29.630 10.16 0.00 35.15 3.67
4191 6358 2.205074 CGGAGTATTTGCTAGCAGTGG 58.795 52.381 18.45 0.00 0.00 4.00
4355 6546 8.066000 CCGTCCCATAATATAAGAACGTTTTTC 58.934 37.037 7.42 0.00 0.00 2.29
4368 6559 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4384 6575 8.616076 CACTTGATCCATCATAAAAAGTACTCC 58.384 37.037 0.00 0.00 36.56 3.85
4385 6576 9.383519 TCACTTGATCCATCATAAAAAGTACTC 57.616 33.333 0.00 0.00 36.56 2.59
4386 6577 9.911788 ATCACTTGATCCATCATAAAAAGTACT 57.088 29.630 0.00 0.00 36.56 2.73
4447 6638 8.128582 TGAGTGCAAGTTTGACTGTATTTTAAG 58.871 33.333 0.00 0.00 0.00 1.85
4563 6754 4.519350 TGTCAGGTGTTACTCTACTGTGAG 59.481 45.833 0.00 0.00 39.78 3.51
4794 6985 0.321919 CTGCTGCTTGCTCCTTGGTA 60.322 55.000 0.00 0.00 43.37 3.25
4808 6999 8.330302 CCTTTTTGTTCTTGTTTTTATCTGCTG 58.670 33.333 0.00 0.00 0.00 4.41
4912 7106 4.026052 AGAACCTAAATTCAAGCCCATGG 58.974 43.478 4.14 4.14 0.00 3.66
4918 7112 6.867550 AGCCAAATAGAACCTAAATTCAAGC 58.132 36.000 0.00 0.00 0.00 4.01
4975 7172 4.078537 CACCACTCCCACAATAACAATGA 58.921 43.478 0.00 0.00 0.00 2.57
5067 7264 0.255033 ATTTGGGACGGAGGTAAGGC 59.745 55.000 0.00 0.00 0.00 4.35
5068 7265 2.801077 AATTTGGGACGGAGGTAAGG 57.199 50.000 0.00 0.00 0.00 2.69
5069 7266 4.482952 AGTAATTTGGGACGGAGGTAAG 57.517 45.455 0.00 0.00 0.00 2.34
5080 7421 9.030301 CAACACTAAAAAGTCAAGTAATTTGGG 57.970 33.333 0.00 0.00 37.39 4.12
5145 7486 3.947612 AATACTACTCCCTCCGTCTCA 57.052 47.619 0.00 0.00 0.00 3.27
5236 7577 2.061773 AGTTCAACAGTCTTGATCGCG 58.938 47.619 0.00 0.00 0.00 5.87
5274 7615 7.492344 GGAAAACAAAATGTCAATTGTCAGTCT 59.508 33.333 11.00 0.00 38.75 3.24
5296 7637 5.048083 GGACACACTGATAAATTGCAGGAAA 60.048 40.000 0.00 0.00 36.47 3.13
5380 7721 9.853177 ATATCCTAAACTGATTGGTTTTCTAGG 57.147 33.333 0.00 0.00 39.66 3.02
5402 7749 8.718102 ACTTATGGTATATTGCCAACGATATC 57.282 34.615 0.00 0.00 39.72 1.63
5439 7798 1.135888 CGTGTGCATTCACCACTCATG 60.136 52.381 2.16 0.00 42.46 3.07
5453 7812 5.387342 GCTGAATGTTTTGTTATTCGTGTGC 60.387 40.000 0.00 0.00 36.36 4.57
5458 7817 6.932901 ATGTGCTGAATGTTTTGTTATTCG 57.067 33.333 0.00 0.00 36.36 3.34
5534 7893 6.599638 GTGAATTGAGGGAGTAGCAGTTTTAT 59.400 38.462 0.00 0.00 0.00 1.40
5535 7894 5.938125 GTGAATTGAGGGAGTAGCAGTTTTA 59.062 40.000 0.00 0.00 0.00 1.52
5536 7895 4.762251 GTGAATTGAGGGAGTAGCAGTTTT 59.238 41.667 0.00 0.00 0.00 2.43
5537 7896 4.042187 AGTGAATTGAGGGAGTAGCAGTTT 59.958 41.667 0.00 0.00 0.00 2.66
5538 7897 3.584848 AGTGAATTGAGGGAGTAGCAGTT 59.415 43.478 0.00 0.00 0.00 3.16
5539 7898 3.177228 AGTGAATTGAGGGAGTAGCAGT 58.823 45.455 0.00 0.00 0.00 4.40
5540 7899 3.902881 AGTGAATTGAGGGAGTAGCAG 57.097 47.619 0.00 0.00 0.00 4.24
5541 7900 4.640771 AAAGTGAATTGAGGGAGTAGCA 57.359 40.909 0.00 0.00 0.00 3.49
5542 7901 4.762251 ACAAAAGTGAATTGAGGGAGTAGC 59.238 41.667 0.00 0.00 0.00 3.58
5543 7902 7.661847 ACTTACAAAAGTGAATTGAGGGAGTAG 59.338 37.037 0.00 0.00 44.40 2.57
5544 7903 7.514721 ACTTACAAAAGTGAATTGAGGGAGTA 58.485 34.615 0.00 0.00 44.40 2.59
5545 7904 6.365520 ACTTACAAAAGTGAATTGAGGGAGT 58.634 36.000 0.00 0.00 44.40 3.85
5546 7905 6.486657 TGACTTACAAAAGTGAATTGAGGGAG 59.513 38.462 0.00 0.00 46.09 4.30
5547 7906 6.361433 TGACTTACAAAAGTGAATTGAGGGA 58.639 36.000 0.00 0.00 46.09 4.20
5548 7907 6.633500 TGACTTACAAAAGTGAATTGAGGG 57.367 37.500 0.00 0.00 46.09 4.30
5549 7908 8.352201 TGAATGACTTACAAAAGTGAATTGAGG 58.648 33.333 0.00 0.00 46.09 3.86
5550 7909 9.390795 CTGAATGACTTACAAAAGTGAATTGAG 57.609 33.333 0.00 0.00 46.09 3.02
5551 7910 9.119418 TCTGAATGACTTACAAAAGTGAATTGA 57.881 29.630 0.00 0.00 46.09 2.57
5552 7911 9.173939 GTCTGAATGACTTACAAAAGTGAATTG 57.826 33.333 0.00 0.00 46.09 2.32
5553 7912 8.902806 TGTCTGAATGACTTACAAAAGTGAATT 58.097 29.630 0.00 0.00 46.09 2.17
5554 7913 8.450578 TGTCTGAATGACTTACAAAAGTGAAT 57.549 30.769 0.00 0.00 46.09 2.57
5555 7914 7.467267 GCTGTCTGAATGACTTACAAAAGTGAA 60.467 37.037 0.00 0.00 46.09 3.18
5556 7915 6.017934 GCTGTCTGAATGACTTACAAAAGTGA 60.018 38.462 0.00 0.00 46.09 3.41
5557 7916 6.017605 AGCTGTCTGAATGACTTACAAAAGTG 60.018 38.462 0.00 0.00 46.09 3.16
5559 7918 6.551385 AGCTGTCTGAATGACTTACAAAAG 57.449 37.500 0.00 0.00 45.54 2.27
5560 7919 8.445275 TTTAGCTGTCTGAATGACTTACAAAA 57.555 30.769 0.00 0.00 45.54 2.44
5561 7920 8.445275 TTTTAGCTGTCTGAATGACTTACAAA 57.555 30.769 0.00 0.00 45.54 2.83
5562 7921 8.445275 TTTTTAGCTGTCTGAATGACTTACAA 57.555 30.769 0.00 0.00 45.54 2.41
5563 7922 8.506437 CATTTTTAGCTGTCTGAATGACTTACA 58.494 33.333 0.00 0.00 45.54 2.41
5564 7923 7.965107 CCATTTTTAGCTGTCTGAATGACTTAC 59.035 37.037 0.00 0.00 45.54 2.34
5565 7924 7.121168 CCCATTTTTAGCTGTCTGAATGACTTA 59.879 37.037 0.00 0.00 45.54 2.24
5566 7925 6.071728 CCCATTTTTAGCTGTCTGAATGACTT 60.072 38.462 0.00 0.00 45.54 3.01
5567 7926 5.416952 CCCATTTTTAGCTGTCTGAATGACT 59.583 40.000 0.00 0.00 45.54 3.41
5568 7927 5.644644 CCCATTTTTAGCTGTCTGAATGAC 58.355 41.667 0.00 0.00 45.54 3.06
5569 7928 4.158394 GCCCATTTTTAGCTGTCTGAATGA 59.842 41.667 0.00 0.00 0.00 2.57
5570 7929 4.159135 AGCCCATTTTTAGCTGTCTGAATG 59.841 41.667 0.00 0.07 34.99 2.67
5571 7930 4.347607 AGCCCATTTTTAGCTGTCTGAAT 58.652 39.130 0.00 0.00 34.99 2.57
5572 7931 3.766545 AGCCCATTTTTAGCTGTCTGAA 58.233 40.909 0.00 0.00 34.99 3.02
5573 7932 3.439857 AGCCCATTTTTAGCTGTCTGA 57.560 42.857 0.00 0.00 34.99 3.27
5579 7938 4.687901 ACAAAACAGCCCATTTTTAGCT 57.312 36.364 0.00 0.00 37.32 3.32
5580 7939 5.293560 TGTACAAAACAGCCCATTTTTAGC 58.706 37.500 0.00 0.00 33.01 3.09
5581 7940 7.961325 AATGTACAAAACAGCCCATTTTTAG 57.039 32.000 0.00 0.00 42.70 1.85
5582 7941 9.646427 GATAATGTACAAAACAGCCCATTTTTA 57.354 29.630 0.00 0.00 42.70 1.52
5583 7942 8.374743 AGATAATGTACAAAACAGCCCATTTTT 58.625 29.630 0.00 0.00 42.70 1.94
5584 7943 7.818930 CAGATAATGTACAAAACAGCCCATTTT 59.181 33.333 0.00 0.00 42.70 1.82
5585 7944 7.178274 TCAGATAATGTACAAAACAGCCCATTT 59.822 33.333 0.00 0.00 42.70 2.32
5586 7945 6.663093 TCAGATAATGTACAAAACAGCCCATT 59.337 34.615 0.00 0.00 42.70 3.16
5587 7946 6.186957 TCAGATAATGTACAAAACAGCCCAT 58.813 36.000 0.00 0.00 42.70 4.00
5588 7947 5.565509 TCAGATAATGTACAAAACAGCCCA 58.434 37.500 0.00 0.00 42.70 5.36
5589 7948 6.509418 TTCAGATAATGTACAAAACAGCCC 57.491 37.500 0.00 0.00 42.70 5.19
5590 7949 8.028938 ACAATTCAGATAATGTACAAAACAGCC 58.971 33.333 0.00 0.00 42.70 4.85
5591 7950 8.970691 ACAATTCAGATAATGTACAAAACAGC 57.029 30.769 0.00 0.00 42.70 4.40
5601 7960 9.512588 AGACTTTGAAGACAATTCAGATAATGT 57.487 29.630 0.00 0.00 35.85 2.71
5619 7978 9.231297 CCTCCATTCACTTTTATAAGACTTTGA 57.769 33.333 0.00 0.00 35.30 2.69
5620 7979 8.462016 CCCTCCATTCACTTTTATAAGACTTTG 58.538 37.037 0.00 0.00 35.30 2.77
5621 7980 8.390921 TCCCTCCATTCACTTTTATAAGACTTT 58.609 33.333 0.00 0.00 35.30 2.66
5622 7981 7.928873 TCCCTCCATTCACTTTTATAAGACTT 58.071 34.615 0.00 0.00 35.30 3.01
5623 7982 7.182930 ACTCCCTCCATTCACTTTTATAAGACT 59.817 37.037 0.00 0.00 35.30 3.24
5624 7983 7.339482 ACTCCCTCCATTCACTTTTATAAGAC 58.661 38.462 0.00 0.00 35.30 3.01
5625 7984 7.510675 ACTCCCTCCATTCACTTTTATAAGA 57.489 36.000 0.00 0.00 35.30 2.10
5626 7985 8.487028 ACTACTCCCTCCATTCACTTTTATAAG 58.513 37.037 0.00 0.00 37.40 1.73
5627 7986 8.388656 ACTACTCCCTCCATTCACTTTTATAA 57.611 34.615 0.00 0.00 0.00 0.98
5628 7987 7.989947 ACTACTCCCTCCATTCACTTTTATA 57.010 36.000 0.00 0.00 0.00 0.98
5629 7988 6.893020 ACTACTCCCTCCATTCACTTTTAT 57.107 37.500 0.00 0.00 0.00 1.40
5630 7989 6.697641 AACTACTCCCTCCATTCACTTTTA 57.302 37.500 0.00 0.00 0.00 1.52
5631 7990 5.584551 AACTACTCCCTCCATTCACTTTT 57.415 39.130 0.00 0.00 0.00 2.27
5632 7991 5.584551 AAACTACTCCCTCCATTCACTTT 57.415 39.130 0.00 0.00 0.00 2.66
5633 7992 5.310857 AGAAAACTACTCCCTCCATTCACTT 59.689 40.000 0.00 0.00 0.00 3.16
5634 7993 4.846940 AGAAAACTACTCCCTCCATTCACT 59.153 41.667 0.00 0.00 0.00 3.41
5635 7994 5.167303 AGAAAACTACTCCCTCCATTCAC 57.833 43.478 0.00 0.00 0.00 3.18
5636 7995 5.843019 AAGAAAACTACTCCCTCCATTCA 57.157 39.130 0.00 0.00 0.00 2.57
5637 7996 8.631480 TTTAAAGAAAACTACTCCCTCCATTC 57.369 34.615 0.00 0.00 0.00 2.67
5638 7997 9.601810 AATTTAAAGAAAACTACTCCCTCCATT 57.398 29.630 0.00 0.00 0.00 3.16
5639 7998 9.025041 CAATTTAAAGAAAACTACTCCCTCCAT 57.975 33.333 0.00 0.00 0.00 3.41
5640 7999 7.039993 GCAATTTAAAGAAAACTACTCCCTCCA 60.040 37.037 0.00 0.00 0.00 3.86
5641 8000 7.039993 TGCAATTTAAAGAAAACTACTCCCTCC 60.040 37.037 0.00 0.00 0.00 4.30
5642 8001 7.882179 TGCAATTTAAAGAAAACTACTCCCTC 58.118 34.615 0.00 0.00 0.00 4.30
5643 8002 7.833285 TGCAATTTAAAGAAAACTACTCCCT 57.167 32.000 0.00 0.00 0.00 4.20
5644 8003 7.484959 CGATGCAATTTAAAGAAAACTACTCCC 59.515 37.037 0.00 0.00 0.00 4.30
5645 8004 7.484959 CCGATGCAATTTAAAGAAAACTACTCC 59.515 37.037 0.00 0.00 0.00 3.85
5646 8005 8.021396 ACCGATGCAATTTAAAGAAAACTACTC 58.979 33.333 0.00 0.00 0.00 2.59
5647 8006 7.882179 ACCGATGCAATTTAAAGAAAACTACT 58.118 30.769 0.00 0.00 0.00 2.57
5648 8007 8.424731 CAACCGATGCAATTTAAAGAAAACTAC 58.575 33.333 0.00 0.00 0.00 2.73
5715 8086 4.580580 GGCCCAACCAGATTTTCTATACTG 59.419 45.833 0.00 0.00 38.86 2.74
5806 8183 8.294577 GGTCGAATTTTCAGGTTAGTAATTGTT 58.705 33.333 0.00 0.00 0.00 2.83
5915 8295 4.264083 ACGGAGGGAATAGACGGGATATAA 60.264 45.833 0.00 0.00 0.00 0.98
5917 8297 2.042706 ACGGAGGGAATAGACGGGATAT 59.957 50.000 0.00 0.00 0.00 1.63
5926 8306 1.200519 TGTTGGGACGGAGGGAATAG 58.799 55.000 0.00 0.00 0.00 1.73
5931 8311 0.909623 ACTTATGTTGGGACGGAGGG 59.090 55.000 0.00 0.00 0.00 4.30
5932 8312 1.278127 ACACTTATGTTGGGACGGAGG 59.722 52.381 0.00 0.00 34.46 4.30
5933 8313 2.233922 AGACACTTATGTTGGGACGGAG 59.766 50.000 0.00 0.00 39.95 4.63
5934 8314 2.253610 AGACACTTATGTTGGGACGGA 58.746 47.619 0.00 0.00 39.95 4.69
5935 8315 2.762535 AGACACTTATGTTGGGACGG 57.237 50.000 0.00 0.00 39.95 4.79
5936 8316 4.092968 GCTTAAGACACTTATGTTGGGACG 59.907 45.833 6.67 0.00 39.95 4.79
5937 8317 5.246307 AGCTTAAGACACTTATGTTGGGAC 58.754 41.667 6.67 0.00 39.95 4.46
5938 8318 5.499004 AGCTTAAGACACTTATGTTGGGA 57.501 39.130 6.67 0.00 39.95 4.37
5939 8319 7.681939 TTAAGCTTAAGACACTTATGTTGGG 57.318 36.000 14.96 0.00 39.95 4.12
5944 8324 9.901724 CGTTGTATTAAGCTTAAGACACTTATG 57.098 33.333 34.68 24.85 42.48 1.90
5945 8325 9.649167 ACGTTGTATTAAGCTTAAGACACTTAT 57.351 29.630 34.68 22.11 42.48 1.73
5947 8327 7.958053 ACGTTGTATTAAGCTTAAGACACTT 57.042 32.000 34.68 22.95 42.48 3.16
5948 8328 8.084073 TGTACGTTGTATTAAGCTTAAGACACT 58.916 33.333 34.68 24.66 42.48 3.55
5949 8329 8.231304 TGTACGTTGTATTAAGCTTAAGACAC 57.769 34.615 34.68 27.86 42.48 3.67
5950 8330 8.815141 TTGTACGTTGTATTAAGCTTAAGACA 57.185 30.769 32.40 32.40 41.48 3.41
5951 8331 9.737025 CTTTGTACGTTGTATTAAGCTTAAGAC 57.263 33.333 28.78 28.78 35.89 3.01
5952 8332 9.480053 ACTTTGTACGTTGTATTAAGCTTAAGA 57.520 29.630 22.55 16.47 0.00 2.10
5954 8334 9.866936 CAACTTTGTACGTTGTATTAAGCTTAA 57.133 29.630 20.71 20.71 37.54 1.85
5955 8335 9.258826 TCAACTTTGTACGTTGTATTAAGCTTA 57.741 29.630 0.86 0.86 41.76 3.09
5956 8336 8.145316 TCAACTTTGTACGTTGTATTAAGCTT 57.855 30.769 3.48 3.48 41.76 3.74
5957 8337 7.095355 CCTCAACTTTGTACGTTGTATTAAGCT 60.095 37.037 10.62 0.00 41.76 3.74
5958 8338 7.013529 CCTCAACTTTGTACGTTGTATTAAGC 58.986 38.462 10.62 0.00 41.76 3.09
5959 8339 7.013529 GCCTCAACTTTGTACGTTGTATTAAG 58.986 38.462 10.62 2.91 41.76 1.85
5960 8340 6.482641 TGCCTCAACTTTGTACGTTGTATTAA 59.517 34.615 10.62 0.00 41.76 1.40
5961 8341 5.990386 TGCCTCAACTTTGTACGTTGTATTA 59.010 36.000 10.62 0.00 41.76 0.98
5962 8342 4.817464 TGCCTCAACTTTGTACGTTGTATT 59.183 37.500 10.62 0.00 41.76 1.89
5963 8343 4.212636 GTGCCTCAACTTTGTACGTTGTAT 59.787 41.667 10.62 0.00 41.76 2.29
5964 8344 3.556775 GTGCCTCAACTTTGTACGTTGTA 59.443 43.478 10.62 0.59 41.76 2.41
5965 8345 2.353579 GTGCCTCAACTTTGTACGTTGT 59.646 45.455 10.62 0.00 41.76 3.32
5966 8346 2.612212 AGTGCCTCAACTTTGTACGTTG 59.388 45.455 0.00 5.94 42.27 4.10
5967 8347 2.914059 AGTGCCTCAACTTTGTACGTT 58.086 42.857 0.00 0.00 0.00 3.99
5968 8348 2.614829 AGTGCCTCAACTTTGTACGT 57.385 45.000 0.00 0.00 0.00 3.57
5969 8349 5.607119 AATAAGTGCCTCAACTTTGTACG 57.393 39.130 0.00 0.00 40.77 3.67
5970 8350 7.422399 TCAAAATAAGTGCCTCAACTTTGTAC 58.578 34.615 0.00 0.00 40.77 2.90
5971 8351 7.500892 TCTCAAAATAAGTGCCTCAACTTTGTA 59.499 33.333 0.00 0.00 40.77 2.41
5972 8352 6.321181 TCTCAAAATAAGTGCCTCAACTTTGT 59.679 34.615 0.00 0.00 40.77 2.83
5973 8353 6.638468 GTCTCAAAATAAGTGCCTCAACTTTG 59.362 38.462 0.00 0.00 40.77 2.77
5974 8354 6.321181 TGTCTCAAAATAAGTGCCTCAACTTT 59.679 34.615 0.00 0.00 40.77 2.66
5975 8355 5.827797 TGTCTCAAAATAAGTGCCTCAACTT 59.172 36.000 0.00 0.00 42.89 2.66
5976 8356 5.376625 TGTCTCAAAATAAGTGCCTCAACT 58.623 37.500 0.00 0.00 0.00 3.16
5977 8357 5.689383 TGTCTCAAAATAAGTGCCTCAAC 57.311 39.130 0.00 0.00 0.00 3.18
5978 8358 6.239008 CCTTTGTCTCAAAATAAGTGCCTCAA 60.239 38.462 0.00 0.00 0.00 3.02
5979 8359 5.241506 CCTTTGTCTCAAAATAAGTGCCTCA 59.758 40.000 0.00 0.00 0.00 3.86
5980 8360 5.335976 CCCTTTGTCTCAAAATAAGTGCCTC 60.336 44.000 0.00 0.00 0.00 4.70
5981 8361 4.524328 CCCTTTGTCTCAAAATAAGTGCCT 59.476 41.667 0.00 0.00 0.00 4.75
5982 8362 4.522789 TCCCTTTGTCTCAAAATAAGTGCC 59.477 41.667 0.00 0.00 0.00 5.01
5983 8363 5.241728 ACTCCCTTTGTCTCAAAATAAGTGC 59.758 40.000 0.00 0.00 0.00 4.40
5984 8364 6.884280 ACTCCCTTTGTCTCAAAATAAGTG 57.116 37.500 0.00 0.00 0.00 3.16
5990 8370 9.444600 GTATGTAATACTCCCTTTGTCTCAAAA 57.555 33.333 0.00 0.00 46.23 2.44
6019 8399 3.290948 TCATCTATTTTGGAACGGGGG 57.709 47.619 0.00 0.00 0.00 5.40
6020 8400 3.821033 GGATCATCTATTTTGGAACGGGG 59.179 47.826 0.00 0.00 0.00 5.73
6021 8401 4.460263 TGGATCATCTATTTTGGAACGGG 58.540 43.478 0.00 0.00 0.00 5.28
6022 8402 5.590259 AGTTGGATCATCTATTTTGGAACGG 59.410 40.000 0.00 0.00 0.00 4.44
6023 8403 6.683974 AGTTGGATCATCTATTTTGGAACG 57.316 37.500 0.00 0.00 0.00 3.95
6024 8404 8.306761 ACAAAGTTGGATCATCTATTTTGGAAC 58.693 33.333 11.01 0.00 0.00 3.62
6025 8405 8.421249 ACAAAGTTGGATCATCTATTTTGGAA 57.579 30.769 11.01 0.00 0.00 3.53
6026 8406 8.956426 GTACAAAGTTGGATCATCTATTTTGGA 58.044 33.333 11.01 2.87 0.00 3.53
6027 8407 8.739039 TGTACAAAGTTGGATCATCTATTTTGG 58.261 33.333 11.01 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.