Multiple sequence alignment - TraesCS4B01G176800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G176800 chr4B 100.000 6883 0 0 1 6883 387375822 387382704 0.000000e+00 12711.0
1 TraesCS4B01G176800 chr4B 100.000 746 0 0 7138 7883 387382959 387383704 0.000000e+00 1378.0
2 TraesCS4B01G176800 chr4B 84.953 319 19 11 7592 7883 632119141 632119457 5.980000e-76 296.0
3 TraesCS4B01G176800 chr4B 81.433 307 25 18 7591 7869 56989779 56990081 1.030000e-53 222.0
4 TraesCS4B01G176800 chr4D 96.574 6129 108 25 823 6883 309919064 309925158 0.000000e+00 10061.0
5 TraesCS4B01G176800 chr4D 98.468 457 5 1 7138 7594 309925185 309925639 0.000000e+00 804.0
6 TraesCS4B01G176800 chr4D 90.860 372 28 5 126 494 309902602 309902970 1.980000e-135 494.0
7 TraesCS4B01G176800 chr4D 84.407 295 29 6 7592 7870 470857460 470857753 2.800000e-69 274.0
8 TraesCS4B01G176800 chr4D 93.182 88 6 0 744 831 309905035 309905122 6.420000e-26 130.0
9 TraesCS4B01G176800 chr4A 95.424 6009 147 32 927 6883 164718564 164712632 0.000000e+00 9455.0
10 TraesCS4B01G176800 chr4A 89.224 464 24 9 7138 7594 164712604 164712160 2.480000e-154 556.0
11 TraesCS4B01G176800 chr4A 83.702 362 45 9 127 478 164720779 164720422 5.900000e-86 329.0
12 TraesCS4B01G176800 chr4A 90.000 190 9 4 751 932 164720410 164720223 3.680000e-58 237.0
13 TraesCS4B01G176800 chr4A 91.837 147 10 2 499 645 688474217 688474073 3.730000e-48 204.0
14 TraesCS4B01G176800 chr4A 88.194 144 16 1 502 645 742719074 742718932 3.780000e-38 171.0
15 TraesCS4B01G176800 chr4A 79.397 199 38 3 4891 5087 708918688 708918885 3.840000e-28 137.0
16 TraesCS4B01G176800 chr3A 85.209 311 26 9 7591 7883 729647174 729646866 1.290000e-77 302.0
17 TraesCS4B01G176800 chr3A 92.414 145 10 1 500 644 38660284 38660141 1.040000e-48 206.0
18 TraesCS4B01G176800 chr5B 85.567 291 25 13 7596 7870 285836273 285836562 1.000000e-73 289.0
19 TraesCS4B01G176800 chr5B 82.650 317 39 12 4887 5191 534338254 534338566 4.690000e-67 267.0
20 TraesCS4B01G176800 chr5B 83.846 260 24 4 501 745 231735753 231735497 1.710000e-56 231.0
21 TraesCS4B01G176800 chr5D 81.761 318 42 7 4887 5191 439665661 439665975 1.310000e-62 252.0
22 TraesCS4B01G176800 chr5D 90.805 174 16 0 7710 7883 164651152 164650979 4.760000e-57 233.0
23 TraesCS4B01G176800 chr5A 83.103 290 36 11 4912 5194 555557335 555557618 1.310000e-62 252.0
24 TraesCS4B01G176800 chr5A 95.349 129 6 0 1 129 680706807 680706679 1.040000e-48 206.0
25 TraesCS4B01G176800 chr5A 82.320 181 19 8 4911 5089 569453241 569453410 2.290000e-30 145.0
26 TraesCS4B01G176800 chr5A 82.081 173 22 6 4911 5082 569458291 569458455 1.070000e-28 139.0
27 TraesCS4B01G176800 chr7D 92.529 174 11 1 7710 7883 158939987 158940158 1.700000e-61 248.0
28 TraesCS4B01G176800 chr7D 91.228 171 11 3 7710 7879 495280782 495280949 6.150000e-56 230.0
29 TraesCS4B01G176800 chr1A 90.698 172 16 0 7712 7883 110754250 110754421 6.150000e-56 230.0
30 TraesCS4B01G176800 chr1A 89.831 177 14 2 7710 7883 2667792 2667967 2.860000e-54 224.0
31 TraesCS4B01G176800 chr1A 80.851 282 44 9 7594 7870 572387558 572387834 6.200000e-51 213.0
32 TraesCS4B01G176800 chr3D 90.230 174 15 1 7710 7883 131231899 131232070 7.960000e-55 226.0
33 TraesCS4B01G176800 chr7B 81.290 310 29 9 7590 7883 261982631 261982335 2.860000e-54 224.0
34 TraesCS4B01G176800 chr7B 96.899 129 4 0 1 129 718956900 718957028 4.790000e-52 217.0
35 TraesCS4B01G176800 chr7B 97.581 124 3 0 3 126 145519250 145519127 6.200000e-51 213.0
36 TraesCS4B01G176800 chr7B 93.056 144 9 1 502 645 420068109 420068251 8.020000e-50 209.0
37 TraesCS4B01G176800 chr7B 94.574 129 7 0 1 129 4607349 4607221 4.820000e-47 200.0
38 TraesCS4B01G176800 chr1D 81.849 292 27 6 7591 7856 204888755 204888464 1.030000e-53 222.0
39 TraesCS4B01G176800 chr1D 78.979 333 36 15 7584 7883 10790032 10789701 6.240000e-46 196.0
40 TraesCS4B01G176800 chrUn 97.619 126 3 0 1 126 245559502 245559377 4.790000e-52 217.0
41 TraesCS4B01G176800 chrUn 96.825 126 4 0 1 126 272849635 272849510 2.230000e-50 211.0
42 TraesCS4B01G176800 chrUn 76.568 303 57 11 7591 7883 33147341 33147639 3.810000e-33 154.0
43 TraesCS4B01G176800 chr2B 97.619 126 3 0 1 126 77815759 77815634 4.790000e-52 217.0
44 TraesCS4B01G176800 chr2B 82.743 226 30 6 527 746 117998657 117998435 8.070000e-45 193.0
45 TraesCS4B01G176800 chr2A 96.899 129 4 0 1 129 240481474 240481602 4.790000e-52 217.0
46 TraesCS4B01G176800 chr2A 85.065 154 21 2 492 645 196508024 196508175 1.060000e-33 156.0
47 TraesCS4B01G176800 chr2A 86.131 137 15 3 7591 7724 7362632 7362767 2.290000e-30 145.0
48 TraesCS4B01G176800 chr3B 82.470 251 34 7 504 746 631580074 631579826 2.230000e-50 211.0
49 TraesCS4B01G176800 chr3B 80.392 204 36 4 4888 5088 160369413 160369615 1.370000e-32 152.0
50 TraesCS4B01G176800 chr3B 85.034 147 19 3 493 639 446449856 446449999 6.370000e-31 147.0
51 TraesCS4B01G176800 chr3B 80.488 123 17 3 5212 5327 333469003 333469125 3.920000e-13 87.9
52 TraesCS4B01G176800 chr6D 92.414 145 9 2 501 645 60496931 60497073 1.040000e-48 206.0
53 TraesCS4B01G176800 chr2D 92.361 144 10 1 502 645 12301861 12302003 3.730000e-48 204.0
54 TraesCS4B01G176800 chr2D 91.781 146 10 2 501 645 632808392 632808536 1.340000e-47 202.0
55 TraesCS4B01G176800 chr1B 95.312 128 6 0 1 128 573368944 573369071 3.730000e-48 204.0
56 TraesCS4B01G176800 chr1B 88.028 142 14 3 504 645 163100955 163100817 1.760000e-36 165.0
57 TraesCS4B01G176800 chr7A 88.372 129 13 2 491 619 55389877 55390003 3.810000e-33 154.0
58 TraesCS4B01G176800 chr6B 86.420 81 9 2 664 743 697734731 697734652 3.920000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G176800 chr4B 387375822 387383704 7882 False 7044.50 12711 100.0000 1 7883 2 chr4B.!!$F3 7882
1 TraesCS4B01G176800 chr4D 309919064 309925639 6575 False 5432.50 10061 97.5210 823 7594 2 chr4D.!!$F3 6771
2 TraesCS4B01G176800 chr4D 309902602 309905122 2520 False 312.00 494 92.0210 126 831 2 chr4D.!!$F2 705
3 TraesCS4B01G176800 chr4A 164712160 164720779 8619 True 2644.25 9455 89.5875 127 7594 4 chr4A.!!$R3 7467

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 645 0.174389 GCGCATTCAGTGAGAGGAGA 59.826 55.000 0.30 0.00 0.00 3.71 F
697 2062 0.179137 TGCGCGTTCATAGGAGTGAG 60.179 55.000 8.43 0.00 0.00 3.51 F
1590 5094 0.035820 GCCGTGAATTAGGTGGGTGA 60.036 55.000 0.00 0.00 0.00 4.02 F
1767 5290 2.235402 TGGACGTTCCTGGGATTAACTC 59.765 50.000 0.00 0.00 37.46 3.01 F
2202 5725 2.435059 GGAGTTCCTCGGTGCTGC 60.435 66.667 0.00 0.00 0.00 5.25 F
2396 5919 3.694072 TCTAATTGGTATGCACAACTGCC 59.306 43.478 0.00 0.00 43.51 4.85 F
3396 6919 4.937620 TCAGAAGATGATTTTGAGAACCCG 59.062 41.667 0.00 0.00 31.12 5.28 F
4302 7828 3.981071 TCCATGATCTTCCGTTGAAGT 57.019 42.857 0.00 0.00 46.66 3.01 F
5284 8820 0.179156 GATGTTGTGGATGGCTTGCG 60.179 55.000 0.00 0.00 0.00 4.85 F
5389 8946 0.600557 TAACGCAAATTGCACTGGGG 59.399 50.000 18.65 2.81 45.36 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1437 4941 0.399075 AGAAACCCCGACGGAAACAT 59.601 50.000 17.49 0.0 34.64 2.71 R
2191 5714 1.447489 CTTCTCAGCAGCACCGAGG 60.447 63.158 0.00 0.0 0.00 4.63 R
3396 6919 2.737252 CCGCACTAAAGGTTCAGAAGAC 59.263 50.000 0.00 0.0 0.00 3.01 R
3872 7395 2.943036 TTCTTCGGTTAGCAAAGGGT 57.057 45.000 0.00 0.0 0.00 4.34 R
4160 7686 3.239861 GCTGAGGAACAGGGACTTG 57.760 57.895 0.00 0.0 45.82 3.16 R
4191 7717 3.320541 AGGAAGACTGTCACTGAGAGTTG 59.679 47.826 10.06 0.0 36.30 3.16 R
5269 8805 2.918345 GCACGCAAGCCATCCACAA 61.918 57.895 0.00 0.0 45.62 3.33 R
5823 9381 0.813610 TCACAACAGCACGGGTTCTG 60.814 55.000 0.00 0.0 36.45 3.02 R
6733 10291 0.035056 CAACCGATTTGCCTCCTCCT 60.035 55.000 0.00 0.0 0.00 3.69 R
7291 10873 0.038892 CACAGGTGCCAACATGAAGC 60.039 55.000 0.00 0.0 40.57 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.120085 CGGTAACTTCCCGCCATC 57.880 61.111 0.00 0.00 38.85 3.51
38 39 1.881252 CGGTAACTTCCCGCCATCG 60.881 63.158 0.00 0.00 38.85 3.84
39 40 2.178235 GGTAACTTCCCGCCATCGC 61.178 63.158 0.00 0.00 0.00 4.58
40 41 1.153429 GTAACTTCCCGCCATCGCT 60.153 57.895 0.00 0.00 0.00 4.93
41 42 1.153449 TAACTTCCCGCCATCGCTG 60.153 57.895 0.00 0.00 0.00 5.18
42 43 2.587322 TAACTTCCCGCCATCGCTGG 62.587 60.000 0.00 0.00 46.17 4.85
43 44 4.161295 CTTCCCGCCATCGCTGGA 62.161 66.667 10.06 0.00 46.37 3.86
80 81 4.130857 GCGCGCGAAAAACTGATT 57.869 50.000 37.18 0.00 0.00 2.57
81 82 2.420097 GCGCGCGAAAAACTGATTT 58.580 47.368 37.18 0.00 0.00 2.17
82 83 0.775861 GCGCGCGAAAAACTGATTTT 59.224 45.000 37.18 0.00 43.85 1.82
83 84 1.973320 GCGCGCGAAAAACTGATTTTA 59.027 42.857 37.18 0.00 41.27 1.52
84 85 2.221986 GCGCGCGAAAAACTGATTTTAC 60.222 45.455 37.18 5.44 41.27 2.01
85 86 2.337352 CGCGCGAAAAACTGATTTTACC 59.663 45.455 28.94 0.00 41.27 2.85
86 87 3.301706 GCGCGAAAAACTGATTTTACCA 58.698 40.909 12.10 0.00 41.27 3.25
87 88 3.118972 GCGCGAAAAACTGATTTTACCAC 59.881 43.478 12.10 0.00 41.27 4.16
88 89 3.356658 CGCGAAAAACTGATTTTACCACG 59.643 43.478 0.00 0.00 41.27 4.94
89 90 3.118972 GCGAAAAACTGATTTTACCACGC 59.881 43.478 9.76 9.76 41.27 5.34
90 91 3.356658 CGAAAAACTGATTTTACCACGCG 59.643 43.478 3.53 3.53 41.27 6.01
91 92 2.981400 AAACTGATTTTACCACGCGG 57.019 45.000 12.47 0.00 38.77 6.46
92 93 1.161843 AACTGATTTTACCACGCGGG 58.838 50.000 12.47 6.05 44.81 6.13
93 94 1.303091 ACTGATTTTACCACGCGGGC 61.303 55.000 12.47 0.00 42.05 6.13
94 95 2.304516 CTGATTTTACCACGCGGGCG 62.305 60.000 12.47 12.04 42.05 6.13
95 96 3.728267 GATTTTACCACGCGGGCGC 62.728 63.158 12.47 0.00 44.19 6.53
113 114 4.307908 GCGTTTTGCCGCGTCTGT 62.308 61.111 4.92 0.00 44.69 3.41
114 115 2.326550 CGTTTTGCCGCGTCTGTT 59.673 55.556 4.92 0.00 0.00 3.16
115 116 2.003443 CGTTTTGCCGCGTCTGTTG 61.003 57.895 4.92 0.00 0.00 3.33
116 117 1.657181 GTTTTGCCGCGTCTGTTGG 60.657 57.895 4.92 0.00 0.00 3.77
117 118 1.820056 TTTTGCCGCGTCTGTTGGA 60.820 52.632 4.92 0.00 0.00 3.53
118 119 1.781025 TTTTGCCGCGTCTGTTGGAG 61.781 55.000 4.92 0.00 0.00 3.86
119 120 2.652382 TTTGCCGCGTCTGTTGGAGA 62.652 55.000 4.92 0.00 0.00 3.71
120 121 2.125512 GCCGCGTCTGTTGGAGAT 60.126 61.111 4.92 0.00 31.63 2.75
121 122 2.456119 GCCGCGTCTGTTGGAGATG 61.456 63.158 4.92 0.00 40.33 2.90
156 157 6.048732 TGTGGCAGTAGATCTAACATCAAA 57.951 37.500 3.40 0.00 0.00 2.69
160 161 5.460419 GGCAGTAGATCTAACATCAAAGTCG 59.540 44.000 3.40 0.00 0.00 4.18
216 219 4.640771 AGGGATGAAAACTAGCACAAGA 57.359 40.909 0.00 0.00 0.00 3.02
219 222 4.156739 GGGATGAAAACTAGCACAAGAAGG 59.843 45.833 0.00 0.00 0.00 3.46
245 251 2.390306 TTAGTTGCGGCAGAGGCACA 62.390 55.000 1.67 0.00 43.71 4.57
262 273 2.038659 CACAAGTGAATTGGGTGGGTT 58.961 47.619 0.00 0.00 43.68 4.11
267 278 1.372245 TGAATTGGGTGGGTTGGGGA 61.372 55.000 0.00 0.00 0.00 4.81
270 281 3.759073 TTGGGTGGGTTGGGGAGGA 62.759 63.158 0.00 0.00 0.00 3.71
291 302 0.393808 GGGTGCATCGTACATGGGTT 60.394 55.000 0.00 0.00 0.00 4.11
312 323 0.620556 AGGGTCATGCCTACACTTGG 59.379 55.000 6.20 0.00 37.43 3.61
317 328 1.905894 TCATGCCTACACTTGGTAGCA 59.094 47.619 0.00 0.00 46.73 3.49
355 366 6.410942 AGAGAAAAAGAAGGTCCATTTTGG 57.589 37.500 0.00 0.00 39.43 3.28
372 383 9.928618 TCCATTTTGGTTTATATGGTCTAATGA 57.071 29.630 0.00 0.00 39.03 2.57
402 413 9.847224 AGTCGGTTTATGTAGGATAAAATTGAT 57.153 29.630 0.00 0.00 0.00 2.57
494 505 9.567776 AACCATCGAATCAAATACCATGTAATA 57.432 29.630 0.00 0.00 0.00 0.98
495 506 9.567776 ACCATCGAATCAAATACCATGTAATAA 57.432 29.630 0.00 0.00 0.00 1.40
499 510 9.397280 TCGAATCAAATACCATGTAATAAACCA 57.603 29.630 0.00 0.00 0.00 3.67
503 514 7.476667 TCAAATACCATGTAATAAACCAAGCG 58.523 34.615 0.00 0.00 0.00 4.68
507 518 6.131544 ACCATGTAATAAACCAAGCGAATC 57.868 37.500 0.00 0.00 0.00 2.52
508 519 5.650266 ACCATGTAATAAACCAAGCGAATCA 59.350 36.000 0.00 0.00 0.00 2.57
510 521 7.147915 ACCATGTAATAAACCAAGCGAATCAAT 60.148 33.333 0.00 0.00 0.00 2.57
511 522 7.379529 CCATGTAATAAACCAAGCGAATCAATC 59.620 37.037 0.00 0.00 0.00 2.67
512 523 7.624360 TGTAATAAACCAAGCGAATCAATCT 57.376 32.000 0.00 0.00 0.00 2.40
515 526 3.837213 AACCAAGCGAATCAATCTGTG 57.163 42.857 0.00 0.00 0.00 3.66
517 528 2.086869 CCAAGCGAATCAATCTGTGGT 58.913 47.619 0.00 0.00 0.00 4.16
519 530 3.495193 CAAGCGAATCAATCTGTGGTTG 58.505 45.455 0.00 0.00 27.56 3.77
521 532 2.083774 GCGAATCAATCTGTGGTTGGA 58.916 47.619 0.00 0.00 27.56 3.53
522 533 2.684881 GCGAATCAATCTGTGGTTGGAT 59.315 45.455 0.00 0.00 27.56 3.41
527 538 3.843422 TCAATCTGTGGTTGGATTGGTT 58.157 40.909 13.36 0.00 44.98 3.67
528 539 4.991776 TCAATCTGTGGTTGGATTGGTTA 58.008 39.130 13.36 0.00 44.98 2.85
529 540 5.389520 TCAATCTGTGGTTGGATTGGTTAA 58.610 37.500 13.36 0.00 44.98 2.01
530 541 5.835819 TCAATCTGTGGTTGGATTGGTTAAA 59.164 36.000 13.36 0.00 44.98 1.52
531 542 5.982890 ATCTGTGGTTGGATTGGTTAAAG 57.017 39.130 0.00 0.00 0.00 1.85
532 543 4.148838 TCTGTGGTTGGATTGGTTAAAGG 58.851 43.478 0.00 0.00 0.00 3.11
533 544 3.235200 TGTGGTTGGATTGGTTAAAGGG 58.765 45.455 0.00 0.00 0.00 3.95
535 546 3.257375 GTGGTTGGATTGGTTAAAGGGAC 59.743 47.826 0.00 0.00 0.00 4.46
537 548 3.509967 GGTTGGATTGGTTAAAGGGACTG 59.490 47.826 0.00 0.00 40.86 3.51
539 550 3.761897 TGGATTGGTTAAAGGGACTGTG 58.238 45.455 0.00 0.00 40.86 3.66
540 551 3.396276 TGGATTGGTTAAAGGGACTGTGA 59.604 43.478 0.00 0.00 40.86 3.58
542 553 5.251932 TGGATTGGTTAAAGGGACTGTGATA 59.748 40.000 0.00 0.00 40.86 2.15
543 554 6.069088 TGGATTGGTTAAAGGGACTGTGATAT 60.069 38.462 0.00 0.00 40.86 1.63
544 555 6.833933 GGATTGGTTAAAGGGACTGTGATATT 59.166 38.462 0.00 0.00 40.86 1.28
545 556 7.013369 GGATTGGTTAAAGGGACTGTGATATTC 59.987 40.741 0.00 0.00 40.86 1.75
546 557 5.751586 TGGTTAAAGGGACTGTGATATTCC 58.248 41.667 0.00 0.00 40.86 3.01
547 558 5.131067 GGTTAAAGGGACTGTGATATTCCC 58.869 45.833 1.59 1.59 46.22 3.97
550 561 2.262423 GGGACTGTGATATTCCCAGC 57.738 55.000 4.75 0.00 45.40 4.85
551 562 1.202818 GGGACTGTGATATTCCCAGCC 60.203 57.143 4.75 4.28 45.40 4.85
552 563 1.202818 GGACTGTGATATTCCCAGCCC 60.203 57.143 0.00 0.00 0.00 5.19
553 564 1.490490 GACTGTGATATTCCCAGCCCA 59.510 52.381 0.00 0.00 0.00 5.36
554 565 2.107204 GACTGTGATATTCCCAGCCCAT 59.893 50.000 0.00 0.00 0.00 4.00
555 566 2.107204 ACTGTGATATTCCCAGCCCATC 59.893 50.000 0.00 0.00 0.00 3.51
556 567 2.107031 CTGTGATATTCCCAGCCCATCA 59.893 50.000 0.00 0.00 0.00 3.07
557 568 2.107031 TGTGATATTCCCAGCCCATCAG 59.893 50.000 0.00 0.00 0.00 2.90
558 569 1.706866 TGATATTCCCAGCCCATCAGG 59.293 52.381 0.00 0.00 39.47 3.86
559 570 1.707427 GATATTCCCAGCCCATCAGGT 59.293 52.381 0.00 0.00 38.26 4.00
560 571 1.607225 TATTCCCAGCCCATCAGGTT 58.393 50.000 0.00 0.00 38.26 3.50
563 574 1.139498 TCCCAGCCCATCAGGTTTCA 61.139 55.000 0.00 0.00 38.26 2.69
564 575 0.251742 CCCAGCCCATCAGGTTTCAA 60.252 55.000 0.00 0.00 38.26 2.69
565 576 1.180029 CCAGCCCATCAGGTTTCAAG 58.820 55.000 0.00 0.00 38.26 3.02
566 577 1.548582 CCAGCCCATCAGGTTTCAAGT 60.549 52.381 0.00 0.00 38.26 3.16
568 579 1.177401 GCCCATCAGGTTTCAAGTCC 58.823 55.000 0.00 0.00 38.26 3.85
569 580 1.272147 GCCCATCAGGTTTCAAGTCCT 60.272 52.381 0.00 0.00 38.26 3.85
574 585 0.954452 CAGGTTTCAAGTCCTGGTGC 59.046 55.000 3.58 0.00 45.11 5.01
575 586 0.846693 AGGTTTCAAGTCCTGGTGCT 59.153 50.000 0.00 0.00 32.29 4.40
577 588 0.868406 GTTTCAAGTCCTGGTGCTCG 59.132 55.000 0.00 0.00 0.00 5.03
578 589 0.884704 TTTCAAGTCCTGGTGCTCGC 60.885 55.000 0.00 0.00 0.00 5.03
579 590 2.031012 CAAGTCCTGGTGCTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
581 592 0.957395 CAAGTCCTGGTGCTCGCATT 60.957 55.000 0.00 0.00 0.00 3.56
583 594 0.613260 AGTCCTGGTGCTCGCATTTA 59.387 50.000 0.00 0.00 0.00 1.40
587 598 2.682856 TCCTGGTGCTCGCATTTATTTC 59.317 45.455 0.00 0.00 0.00 2.17
589 600 3.488047 CCTGGTGCTCGCATTTATTTCTG 60.488 47.826 0.00 0.00 0.00 3.02
590 601 2.423185 TGGTGCTCGCATTTATTTCTGG 59.577 45.455 0.00 0.00 0.00 3.86
594 605 5.343249 GTGCTCGCATTTATTTCTGGATTT 58.657 37.500 0.00 0.00 0.00 2.17
596 607 7.141363 GTGCTCGCATTTATTTCTGGATTTAT 58.859 34.615 0.00 0.00 0.00 1.40
597 608 7.649306 GTGCTCGCATTTATTTCTGGATTTATT 59.351 33.333 0.00 0.00 0.00 1.40
598 609 8.196771 TGCTCGCATTTATTTCTGGATTTATTT 58.803 29.630 0.00 0.00 0.00 1.40
600 611 9.734620 CTCGCATTTATTTCTGGATTTATTTCA 57.265 29.630 0.00 0.00 0.00 2.69
601 612 9.734620 TCGCATTTATTTCTGGATTTATTTCAG 57.265 29.630 0.00 0.00 0.00 3.02
610 621 9.638239 TTTCTGGATTTATTTCAGAATTTTCGG 57.362 29.630 5.93 0.00 44.00 4.30
611 622 7.257722 TCTGGATTTATTTCAGAATTTTCGGC 58.742 34.615 0.00 0.00 34.97 5.54
612 623 6.033341 TGGATTTATTTCAGAATTTTCGGCG 58.967 36.000 0.00 0.00 0.00 6.46
614 625 6.918022 GGATTTATTTCAGAATTTTCGGCGAT 59.082 34.615 11.76 0.00 0.00 4.58
616 627 2.542766 TTCAGAATTTTCGGCGATGC 57.457 45.000 11.76 0.00 0.00 3.91
617 628 0.373370 TCAGAATTTTCGGCGATGCG 59.627 50.000 11.76 0.00 0.00 4.73
629 640 2.669419 CGATGCGCATTCAGTGAGA 58.331 52.632 26.12 0.00 0.00 3.27
630 641 0.575859 CGATGCGCATTCAGTGAGAG 59.424 55.000 26.12 4.12 0.00 3.20
632 643 0.538584 ATGCGCATTCAGTGAGAGGA 59.461 50.000 19.28 0.00 0.00 3.71
634 645 0.174389 GCGCATTCAGTGAGAGGAGA 59.826 55.000 0.30 0.00 0.00 3.71
635 646 1.919918 CGCATTCAGTGAGAGGAGAC 58.080 55.000 0.00 0.00 0.00 3.36
636 647 1.796982 CGCATTCAGTGAGAGGAGACG 60.797 57.143 0.00 0.00 0.00 4.18
637 648 1.203523 GCATTCAGTGAGAGGAGACGT 59.796 52.381 0.00 0.00 0.00 4.34
638 649 2.353208 GCATTCAGTGAGAGGAGACGTT 60.353 50.000 0.00 0.00 0.00 3.99
639 650 3.506810 CATTCAGTGAGAGGAGACGTTC 58.493 50.000 0.00 0.00 0.00 3.95
677 2042 1.016627 CATAAGGGTCGGTGTGCATG 58.983 55.000 0.00 0.00 0.00 4.06
688 2053 2.176546 GTGCATGTGCGCGTTCAT 59.823 55.556 8.43 10.14 45.83 2.57
690 2055 0.587242 GTGCATGTGCGCGTTCATAG 60.587 55.000 8.43 8.81 45.83 2.23
691 2056 1.010797 GCATGTGCGCGTTCATAGG 60.011 57.895 8.43 0.00 0.00 2.57
692 2057 1.428370 GCATGTGCGCGTTCATAGGA 61.428 55.000 8.43 0.00 0.00 2.94
693 2058 0.578683 CATGTGCGCGTTCATAGGAG 59.421 55.000 8.43 0.00 0.00 3.69
695 2060 0.735978 TGTGCGCGTTCATAGGAGTG 60.736 55.000 8.43 0.00 0.00 3.51
696 2061 0.457853 GTGCGCGTTCATAGGAGTGA 60.458 55.000 8.43 0.00 0.00 3.41
697 2062 0.179137 TGCGCGTTCATAGGAGTGAG 60.179 55.000 8.43 0.00 0.00 3.51
699 2064 1.065102 GCGCGTTCATAGGAGTGAGTA 59.935 52.381 8.43 0.00 0.00 2.59
700 2065 2.287668 GCGCGTTCATAGGAGTGAGTAT 60.288 50.000 8.43 0.00 0.00 2.12
701 2066 3.058432 GCGCGTTCATAGGAGTGAGTATA 60.058 47.826 8.43 0.00 0.00 1.47
702 2067 4.379603 GCGCGTTCATAGGAGTGAGTATAT 60.380 45.833 8.43 0.00 0.00 0.86
703 2068 5.089411 CGCGTTCATAGGAGTGAGTATATG 58.911 45.833 0.00 0.00 0.00 1.78
704 2069 4.859798 GCGTTCATAGGAGTGAGTATATGC 59.140 45.833 0.00 0.00 0.00 3.14
705 2070 5.564848 GCGTTCATAGGAGTGAGTATATGCA 60.565 44.000 0.00 0.00 0.00 3.96
706 2071 5.859114 CGTTCATAGGAGTGAGTATATGCAC 59.141 44.000 0.00 0.00 35.30 4.57
707 2072 5.629079 TCATAGGAGTGAGTATATGCACG 57.371 43.478 0.00 0.00 39.88 5.34
708 2073 5.070685 TCATAGGAGTGAGTATATGCACGT 58.929 41.667 0.00 0.00 39.88 4.49
709 2074 3.717400 AGGAGTGAGTATATGCACGTG 57.283 47.619 12.28 12.28 39.88 4.49
710 2075 3.024547 AGGAGTGAGTATATGCACGTGT 58.975 45.455 18.38 0.00 39.88 4.49
711 2076 4.204799 AGGAGTGAGTATATGCACGTGTA 58.795 43.478 18.38 14.09 39.88 2.90
712 2077 4.827835 AGGAGTGAGTATATGCACGTGTAT 59.172 41.667 22.72 22.72 39.88 2.29
714 2079 6.659668 AGGAGTGAGTATATGCACGTGTATAT 59.340 38.462 32.35 32.35 39.88 0.86
715 2080 7.827729 AGGAGTGAGTATATGCACGTGTATATA 59.172 37.037 30.64 30.64 39.88 0.86
716 2081 8.456471 GGAGTGAGTATATGCACGTGTATATAA 58.544 37.037 33.77 22.44 37.34 0.98
717 2082 9.491934 GAGTGAGTATATGCACGTGTATATAAG 57.508 37.037 33.77 4.60 37.34 1.73
718 2083 7.968956 AGTGAGTATATGCACGTGTATATAAGC 59.031 37.037 33.77 28.50 37.34 3.09
720 2085 8.182227 TGAGTATATGCACGTGTATATAAGCTC 58.818 37.037 33.77 32.29 37.34 4.09
722 2087 8.740906 AGTATATGCACGTGTATATAAGCTCTT 58.259 33.333 33.77 18.04 37.34 2.85
723 2088 7.818493 ATATGCACGTGTATATAAGCTCTTG 57.182 36.000 30.18 0.00 32.72 3.02
724 2089 3.802139 TGCACGTGTATATAAGCTCTTGC 59.198 43.478 18.38 0.00 40.05 4.01
725 2090 3.121328 GCACGTGTATATAAGCTCTTGCG 60.121 47.826 18.38 0.00 45.42 4.85
729 2094 5.005394 ACGTGTATATAAGCTCTTGCGTTTG 59.995 40.000 0.00 0.00 45.42 2.93
730 2095 5.005394 CGTGTATATAAGCTCTTGCGTTTGT 59.995 40.000 0.00 0.00 45.42 2.83
731 2096 6.197655 CGTGTATATAAGCTCTTGCGTTTGTA 59.802 38.462 0.00 0.00 45.42 2.41
732 2097 7.335491 GTGTATATAAGCTCTTGCGTTTGTAC 58.665 38.462 0.00 0.00 45.42 2.90
734 2099 4.928661 ATAAGCTCTTGCGTTTGTACTG 57.071 40.909 0.00 0.00 45.42 2.74
735 2100 2.240493 AGCTCTTGCGTTTGTACTGT 57.760 45.000 0.00 0.00 45.42 3.55
736 2101 1.867233 AGCTCTTGCGTTTGTACTGTG 59.133 47.619 0.00 0.00 45.42 3.66
738 2103 2.031683 GCTCTTGCGTTTGTACTGTGTT 59.968 45.455 0.00 0.00 0.00 3.32
739 2104 3.246699 GCTCTTGCGTTTGTACTGTGTTA 59.753 43.478 0.00 0.00 0.00 2.41
740 2105 4.260456 GCTCTTGCGTTTGTACTGTGTTAA 60.260 41.667 0.00 0.00 0.00 2.01
742 2107 6.179504 TCTTGCGTTTGTACTGTGTTAAAA 57.820 33.333 0.00 0.00 0.00 1.52
825 2651 7.778083 TGACCACATCAATTCGTAATAGTAGT 58.222 34.615 0.00 0.00 33.02 2.73
826 2652 8.905850 TGACCACATCAATTCGTAATAGTAGTA 58.094 33.333 0.00 0.00 33.02 1.82
871 2697 3.609103 GTGAAATGACACGACAAAGCT 57.391 42.857 0.00 0.00 0.00 3.74
984 4486 4.865865 CCTTTCGGCTCCATCCTC 57.134 61.111 0.00 0.00 0.00 3.71
994 4496 3.866582 CCATCCTCCCCTCGTGGC 61.867 72.222 0.00 0.00 0.00 5.01
1304 4806 2.119495 GCCAGGTGATTCTCTTCCCTA 58.881 52.381 0.00 0.00 0.00 3.53
1368 4872 3.505790 AATTGCGGTGGGTCTGGCA 62.506 57.895 0.00 0.00 0.00 4.92
1437 4941 3.074412 GAGGCAAAACTTGGATCTTCGA 58.926 45.455 0.00 0.00 0.00 3.71
1447 4951 2.888594 TGGATCTTCGATGTTTCCGTC 58.111 47.619 13.95 0.00 0.00 4.79
1505 5009 5.576337 TCAAGATCAGTTCGTTTTCTTCG 57.424 39.130 0.00 0.00 0.00 3.79
1521 5025 0.525311 TTCGTCCGCGTTATGGTGTA 59.475 50.000 4.92 0.00 39.49 2.90
1522 5026 0.525311 TCGTCCGCGTTATGGTGTAA 59.475 50.000 4.92 0.00 39.49 2.41
1590 5094 0.035820 GCCGTGAATTAGGTGGGTGA 60.036 55.000 0.00 0.00 0.00 4.02
1759 5282 5.883673 TCTAAATAATTTGGACGTTCCTGGG 59.116 40.000 0.00 0.00 37.46 4.45
1767 5290 2.235402 TGGACGTTCCTGGGATTAACTC 59.765 50.000 0.00 0.00 37.46 3.01
1860 5383 7.099764 GTCCAAGATTGAGAGAATACACTTGA 58.900 38.462 0.00 0.00 36.59 3.02
1880 5403 7.013369 CACTTGATTAGTTAAGGGATTTAGGCC 59.987 40.741 0.00 0.00 33.85 5.19
1900 5423 2.942376 CCGTGGCTTGATACTGCATAAA 59.058 45.455 0.00 0.00 0.00 1.40
1923 5446 6.934048 ATTAGGTTTCTGCTTGCTTCTATC 57.066 37.500 0.00 0.00 0.00 2.08
1960 5483 3.569701 ACAATCGAGGAATTTGCTGTGTT 59.430 39.130 0.00 0.00 0.00 3.32
2143 5666 3.202906 TCGTATGAGGTTAATTGCTGGC 58.797 45.455 0.00 0.00 0.00 4.85
2195 5718 7.265673 TCTGTATTTCTATTTGGAGTTCCTCG 58.734 38.462 0.00 0.00 36.82 4.63
2202 5725 2.435059 GGAGTTCCTCGGTGCTGC 60.435 66.667 0.00 0.00 0.00 5.25
2396 5919 3.694072 TCTAATTGGTATGCACAACTGCC 59.306 43.478 0.00 0.00 43.51 4.85
3396 6919 4.937620 TCAGAAGATGATTTTGAGAACCCG 59.062 41.667 0.00 0.00 31.12 5.28
3872 7395 5.007034 TGAAGCGGATAAAGTCAATTTCCA 58.993 37.500 0.00 0.00 32.01 3.53
4302 7828 3.981071 TCCATGATCTTCCGTTGAAGT 57.019 42.857 0.00 0.00 46.66 3.01
4343 7869 4.278170 GCCGGAAAATGATATGTTCCATGA 59.722 41.667 5.05 0.00 40.80 3.07
4439 7965 7.439356 ACTGTATGAATATCATTGGTGAAGTCG 59.561 37.037 0.00 0.00 38.26 4.18
4463 7989 7.338196 TCGAAAAATTCTGAATACAAGGGCATA 59.662 33.333 2.85 0.00 0.00 3.14
4492 8018 6.596106 ACAGTTTATGCGACCAACATATGTTA 59.404 34.615 20.39 4.90 36.32 2.41
5269 8805 4.142093 GGAAGGTTTGCATATGCTTGATGT 60.142 41.667 27.13 9.82 42.66 3.06
5284 8820 0.179156 GATGTTGTGGATGGCTTGCG 60.179 55.000 0.00 0.00 0.00 4.85
5345 8881 7.176490 AGGATATCACGTAGTAGAGGCTTATT 58.824 38.462 4.83 0.00 41.61 1.40
5347 8883 9.122779 GGATATCACGTAGTAGAGGCTTATTAT 57.877 37.037 4.83 0.00 41.61 1.28
5348 8884 9.938670 GATATCACGTAGTAGAGGCTTATTATG 57.061 37.037 0.00 0.00 41.61 1.90
5349 8885 7.762588 ATCACGTAGTAGAGGCTTATTATGT 57.237 36.000 0.00 0.00 41.61 2.29
5350 8886 8.859236 ATCACGTAGTAGAGGCTTATTATGTA 57.141 34.615 0.00 0.00 41.61 2.29
5351 8887 8.092521 TCACGTAGTAGAGGCTTATTATGTAC 57.907 38.462 0.00 0.00 41.61 2.90
5389 8946 0.600557 TAACGCAAATTGCACTGGGG 59.399 50.000 18.65 2.81 45.36 4.96
5521 9079 6.774170 ACACATGATATGCCACTTGAATATGT 59.226 34.615 0.00 0.00 0.00 2.29
5818 9376 3.683802 AGAGGAGAAAGCCAAATGAGTG 58.316 45.455 0.00 0.00 0.00 3.51
5823 9381 4.540824 GAGAAAGCCAAATGAGTGTTGAC 58.459 43.478 0.00 0.00 0.00 3.18
6125 9683 0.884704 AGTGTCACCGGCATCAACAC 60.885 55.000 0.00 9.29 40.33 3.32
6425 9983 3.003480 GCAGTGGATTCAGTTACTGGAC 58.997 50.000 12.79 4.46 40.55 4.02
6711 10269 8.154649 AGTTAATACGGCAAAGGAGAAATATG 57.845 34.615 0.00 0.00 0.00 1.78
6712 10270 7.990886 AGTTAATACGGCAAAGGAGAAATATGA 59.009 33.333 0.00 0.00 0.00 2.15
6713 10271 6.867662 AATACGGCAAAGGAGAAATATGAG 57.132 37.500 0.00 0.00 0.00 2.90
6714 10272 2.945668 ACGGCAAAGGAGAAATATGAGC 59.054 45.455 0.00 0.00 0.00 4.26
6715 10273 2.945008 CGGCAAAGGAGAAATATGAGCA 59.055 45.455 0.00 0.00 0.00 4.26
6716 10274 3.378112 CGGCAAAGGAGAAATATGAGCAA 59.622 43.478 0.00 0.00 0.00 3.91
6717 10275 4.676546 GGCAAAGGAGAAATATGAGCAAC 58.323 43.478 0.00 0.00 0.00 4.17
6718 10276 4.158394 GGCAAAGGAGAAATATGAGCAACA 59.842 41.667 0.00 0.00 0.00 3.33
6719 10277 5.338365 GCAAAGGAGAAATATGAGCAACAG 58.662 41.667 0.00 0.00 0.00 3.16
6720 10278 5.124457 GCAAAGGAGAAATATGAGCAACAGA 59.876 40.000 0.00 0.00 0.00 3.41
6721 10279 6.349611 GCAAAGGAGAAATATGAGCAACAGAA 60.350 38.462 0.00 0.00 0.00 3.02
6722 10280 7.630082 GCAAAGGAGAAATATGAGCAACAGAAT 60.630 37.037 0.00 0.00 0.00 2.40
6723 10281 8.896744 CAAAGGAGAAATATGAGCAACAGAATA 58.103 33.333 0.00 0.00 0.00 1.75
6724 10282 9.466497 AAAGGAGAAATATGAGCAACAGAATAA 57.534 29.630 0.00 0.00 0.00 1.40
6725 10283 8.674263 AGGAGAAATATGAGCAACAGAATAAG 57.326 34.615 0.00 0.00 0.00 1.73
6726 10284 8.270744 AGGAGAAATATGAGCAACAGAATAAGT 58.729 33.333 0.00 0.00 0.00 2.24
6727 10285 9.547753 GGAGAAATATGAGCAACAGAATAAGTA 57.452 33.333 0.00 0.00 0.00 2.24
7291 10873 9.933723 TCAGTATATGATATGAGGTTTCATGTG 57.066 33.333 0.00 0.00 37.54 3.21
7340 10922 7.484140 AGTTCCAACTTTTCATTCAGAACTTC 58.516 34.615 0.00 0.00 39.60 3.01
7594 11183 1.639298 GCAGCAGGTTGGCGTCTAAG 61.639 60.000 0.00 0.00 39.27 2.18
7595 11184 0.037326 CAGCAGGTTGGCGTCTAAGA 60.037 55.000 0.00 0.00 39.27 2.10
7596 11185 0.247736 AGCAGGTTGGCGTCTAAGAG 59.752 55.000 0.00 0.00 39.27 2.85
7597 11186 1.362406 GCAGGTTGGCGTCTAAGAGC 61.362 60.000 0.00 0.00 0.00 4.09
7598 11187 0.037326 CAGGTTGGCGTCTAAGAGCA 60.037 55.000 0.00 0.00 34.54 4.26
7599 11188 0.905357 AGGTTGGCGTCTAAGAGCAT 59.095 50.000 0.00 0.00 34.54 3.79
7600 11189 1.134670 AGGTTGGCGTCTAAGAGCATC 60.135 52.381 0.00 0.00 34.54 3.91
7621 11210 4.101448 CCGTTGGCCCCTCAGGAG 62.101 72.222 0.00 0.00 38.24 3.69
7634 11223 2.291741 CCTCAGGAGGCATAAAAATCGC 59.708 50.000 1.73 0.00 42.44 4.58
7635 11224 2.291741 CTCAGGAGGCATAAAAATCGCC 59.708 50.000 0.00 0.00 46.62 5.54
7638 11227 4.319249 GGCATAAAAATCGCCGCC 57.681 55.556 0.00 0.00 35.79 6.13
7639 11228 1.733526 GGCATAAAAATCGCCGCCT 59.266 52.632 0.00 0.00 35.79 5.52
7640 11229 0.948678 GGCATAAAAATCGCCGCCTA 59.051 50.000 0.00 0.00 35.79 3.93
7641 11230 1.069227 GGCATAAAAATCGCCGCCTAG 60.069 52.381 0.00 0.00 35.79 3.02
7642 11231 1.069227 GCATAAAAATCGCCGCCTAGG 60.069 52.381 3.67 3.67 44.97 3.02
7643 11232 2.489971 CATAAAAATCGCCGCCTAGGA 58.510 47.619 14.75 0.00 45.00 2.94
7644 11233 2.234300 TAAAAATCGCCGCCTAGGAG 57.766 50.000 14.75 9.83 45.00 3.69
7645 11234 0.252197 AAAAATCGCCGCCTAGGAGT 59.748 50.000 14.75 0.00 45.00 3.85
7646 11235 0.179081 AAAATCGCCGCCTAGGAGTC 60.179 55.000 14.75 0.00 45.00 3.36
7647 11236 1.327690 AAATCGCCGCCTAGGAGTCA 61.328 55.000 14.75 0.00 45.00 3.41
7648 11237 1.739338 AATCGCCGCCTAGGAGTCAG 61.739 60.000 14.75 2.77 45.00 3.51
7649 11238 4.577246 CGCCGCCTAGGAGTCAGC 62.577 72.222 14.75 7.59 45.00 4.26
7650 11239 4.228567 GCCGCCTAGGAGTCAGCC 62.229 72.222 14.75 0.00 45.00 4.85
7651 11240 3.905678 CCGCCTAGGAGTCAGCCG 61.906 72.222 14.75 4.17 45.00 5.52
7652 11241 3.905678 CGCCTAGGAGTCAGCCGG 61.906 72.222 14.75 0.00 0.00 6.13
7653 11242 4.228567 GCCTAGGAGTCAGCCGGC 62.229 72.222 21.89 21.89 0.00 6.13
7654 11243 3.905678 CCTAGGAGTCAGCCGGCG 61.906 72.222 23.20 16.49 0.00 6.46
7655 11244 3.905678 CTAGGAGTCAGCCGGCGG 61.906 72.222 24.35 24.35 0.00 6.13
7656 11245 4.753662 TAGGAGTCAGCCGGCGGT 62.754 66.667 28.82 11.69 0.00 5.68
7657 11246 3.348554 TAGGAGTCAGCCGGCGGTA 62.349 63.158 28.82 10.48 0.00 4.02
7658 11247 2.635787 TAGGAGTCAGCCGGCGGTAT 62.636 60.000 28.82 15.65 0.00 2.73
7659 11248 2.198287 GGAGTCAGCCGGCGGTATA 61.198 63.158 28.82 10.08 0.00 1.47
7660 11249 1.737816 GAGTCAGCCGGCGGTATAA 59.262 57.895 28.82 8.10 0.00 0.98
7661 11250 0.317479 GAGTCAGCCGGCGGTATAAT 59.683 55.000 28.82 12.02 0.00 1.28
7662 11251 0.317479 AGTCAGCCGGCGGTATAATC 59.683 55.000 28.82 9.53 0.00 1.75
7663 11252 1.007336 GTCAGCCGGCGGTATAATCG 61.007 60.000 28.82 8.28 0.00 3.34
7664 11253 1.736645 CAGCCGGCGGTATAATCGG 60.737 63.158 28.82 6.25 44.70 4.18
7670 11259 3.123674 GCGGTATAATCGGCTCTGG 57.876 57.895 0.00 0.00 0.00 3.86
7671 11260 0.389948 GCGGTATAATCGGCTCTGGG 60.390 60.000 0.00 0.00 0.00 4.45
7672 11261 0.246635 CGGTATAATCGGCTCTGGGG 59.753 60.000 0.00 0.00 0.00 4.96
7673 11262 0.036294 GGTATAATCGGCTCTGGGGC 60.036 60.000 0.00 0.00 37.12 5.80
7682 11271 3.636231 CTCTGGGGCGGTTGGACA 61.636 66.667 0.00 0.00 0.00 4.02
7683 11272 3.901797 CTCTGGGGCGGTTGGACAC 62.902 68.421 0.00 0.00 0.00 3.67
7684 11273 3.953775 CTGGGGCGGTTGGACACT 61.954 66.667 0.00 0.00 0.00 3.55
7685 11274 3.901797 CTGGGGCGGTTGGACACTC 62.902 68.421 0.00 0.00 0.00 3.51
7686 11275 3.948719 GGGGCGGTTGGACACTCA 61.949 66.667 0.00 0.00 0.00 3.41
7687 11276 2.358737 GGGCGGTTGGACACTCAG 60.359 66.667 0.00 0.00 0.00 3.35
7688 11277 3.050275 GGCGGTTGGACACTCAGC 61.050 66.667 0.00 0.00 0.00 4.26
7689 11278 3.050275 GCGGTTGGACACTCAGCC 61.050 66.667 0.00 0.00 35.11 4.85
7691 11280 2.426023 GGTTGGACACTCAGCCGT 59.574 61.111 0.00 0.00 0.00 5.68
7692 11281 1.668151 GGTTGGACACTCAGCCGTC 60.668 63.158 0.00 0.00 0.00 4.79
7693 11282 2.022129 GTTGGACACTCAGCCGTCG 61.022 63.158 0.00 0.00 32.74 5.12
7694 11283 3.858868 TTGGACACTCAGCCGTCGC 62.859 63.158 0.00 0.00 32.74 5.19
7721 11310 3.981308 CGATGTCGGCCCACTTTT 58.019 55.556 1.09 0.00 35.37 2.27
7722 11311 1.501741 CGATGTCGGCCCACTTTTG 59.498 57.895 1.09 0.00 35.37 2.44
7723 11312 1.883021 GATGTCGGCCCACTTTTGG 59.117 57.895 1.09 0.00 43.50 3.28
7724 11313 0.893727 GATGTCGGCCCACTTTTGGT 60.894 55.000 1.09 0.00 42.10 3.67
7725 11314 0.402504 ATGTCGGCCCACTTTTGGTA 59.597 50.000 1.09 0.00 42.10 3.25
7726 11315 0.183014 TGTCGGCCCACTTTTGGTAA 59.817 50.000 1.09 0.00 42.10 2.85
7727 11316 1.320507 GTCGGCCCACTTTTGGTAAA 58.679 50.000 0.00 0.00 42.10 2.01
7728 11317 1.682323 GTCGGCCCACTTTTGGTAAAA 59.318 47.619 0.00 0.00 42.10 1.52
7729 11318 2.101082 GTCGGCCCACTTTTGGTAAAAA 59.899 45.455 0.00 0.00 42.10 1.94
7746 11335 1.148310 AAAATGGCTCGATATCGGCG 58.852 50.000 24.12 16.25 40.29 6.46
7747 11336 1.291877 AAATGGCTCGATATCGGCGC 61.292 55.000 24.12 23.63 40.29 6.53
7748 11337 3.971453 ATGGCTCGATATCGGCGCG 62.971 63.158 24.12 0.00 40.29 6.86
7749 11338 4.400109 GGCTCGATATCGGCGCGA 62.400 66.667 24.12 4.36 41.13 5.87
7750 11339 2.428569 GCTCGATATCGGCGCGAA 60.429 61.111 24.12 3.58 39.99 4.70
7751 11340 1.801913 GCTCGATATCGGCGCGAAT 60.802 57.895 24.12 1.70 39.99 3.34
7752 11341 1.734359 GCTCGATATCGGCGCGAATC 61.734 60.000 24.12 3.92 39.99 2.52
7753 11342 1.456678 CTCGATATCGGCGCGAATCG 61.457 60.000 24.12 23.09 42.20 3.34
7754 11343 2.497092 CGATATCGGCGCGAATCGG 61.497 63.158 17.51 0.00 39.97 4.18
7761 11350 2.742372 GCGCGAATCGGCCCATAT 60.742 61.111 12.10 0.00 38.94 1.78
7762 11351 2.325082 GCGCGAATCGGCCCATATT 61.325 57.895 12.10 0.00 38.94 1.28
7763 11352 1.787847 CGCGAATCGGCCCATATTC 59.212 57.895 0.00 3.55 33.78 1.75
7767 11356 1.068474 GAATCGGCCCATATTCGACG 58.932 55.000 0.00 0.00 35.70 5.12
7768 11357 0.391597 AATCGGCCCATATTCGACGT 59.608 50.000 0.00 0.00 35.70 4.34
7769 11358 0.319555 ATCGGCCCATATTCGACGTG 60.320 55.000 0.00 0.00 35.70 4.49
7770 11359 1.954146 CGGCCCATATTCGACGTGG 60.954 63.158 0.00 0.00 0.00 4.94
7771 11360 1.145377 GGCCCATATTCGACGTGGT 59.855 57.895 0.00 0.00 0.00 4.16
7772 11361 0.463116 GGCCCATATTCGACGTGGTT 60.463 55.000 0.00 0.00 0.00 3.67
7773 11362 1.375551 GCCCATATTCGACGTGGTTT 58.624 50.000 0.00 0.00 0.00 3.27
7774 11363 1.063469 GCCCATATTCGACGTGGTTTG 59.937 52.381 0.00 0.00 0.00 2.93
7775 11364 1.668751 CCCATATTCGACGTGGTTTGG 59.331 52.381 0.00 0.00 0.00 3.28
7776 11365 1.063469 CCATATTCGACGTGGTTTGGC 59.937 52.381 0.00 0.00 0.00 4.52
7777 11366 1.003851 ATATTCGACGTGGTTTGGCG 58.996 50.000 0.00 0.00 0.00 5.69
7778 11367 0.319727 TATTCGACGTGGTTTGGCGT 60.320 50.000 0.00 0.00 44.50 5.68
7779 11368 1.837538 ATTCGACGTGGTTTGGCGTG 61.838 55.000 0.00 0.00 41.70 5.34
7780 11369 2.902759 TTCGACGTGGTTTGGCGTGA 62.903 55.000 0.00 0.00 41.70 4.35
7781 11370 2.526993 CGACGTGGTTTGGCGTGAA 61.527 57.895 0.00 0.00 41.70 3.18
7782 11371 1.837538 CGACGTGGTTTGGCGTGAAT 61.838 55.000 0.00 0.00 41.70 2.57
7783 11372 0.309612 GACGTGGTTTGGCGTGAATT 59.690 50.000 0.00 0.00 41.70 2.17
7784 11373 0.309612 ACGTGGTTTGGCGTGAATTC 59.690 50.000 0.00 0.00 40.03 2.17
7785 11374 0.591170 CGTGGTTTGGCGTGAATTCT 59.409 50.000 7.05 0.00 0.00 2.40
7786 11375 1.399727 CGTGGTTTGGCGTGAATTCTC 60.400 52.381 7.05 1.90 0.00 2.87
7787 11376 1.606668 GTGGTTTGGCGTGAATTCTCA 59.393 47.619 7.05 0.00 0.00 3.27
7788 11377 2.034053 GTGGTTTGGCGTGAATTCTCAA 59.966 45.455 7.05 3.91 31.88 3.02
7789 11378 2.034053 TGGTTTGGCGTGAATTCTCAAC 59.966 45.455 7.05 3.84 31.88 3.18
7790 11379 2.034053 GGTTTGGCGTGAATTCTCAACA 59.966 45.455 7.05 2.35 31.88 3.33
7791 11380 3.305335 GGTTTGGCGTGAATTCTCAACAT 60.305 43.478 7.05 0.00 31.88 2.71
7792 11381 4.083003 GGTTTGGCGTGAATTCTCAACATA 60.083 41.667 7.05 0.00 31.88 2.29
7793 11382 5.457140 GTTTGGCGTGAATTCTCAACATAA 58.543 37.500 7.05 1.23 31.88 1.90
7794 11383 5.697473 TTGGCGTGAATTCTCAACATAAA 57.303 34.783 7.05 0.00 31.88 1.40
7795 11384 5.895636 TGGCGTGAATTCTCAACATAAAT 57.104 34.783 7.05 0.00 31.88 1.40
7796 11385 6.993786 TGGCGTGAATTCTCAACATAAATA 57.006 33.333 7.05 0.00 31.88 1.40
7797 11386 7.384439 TGGCGTGAATTCTCAACATAAATAA 57.616 32.000 7.05 0.00 31.88 1.40
7798 11387 7.995289 TGGCGTGAATTCTCAACATAAATAAT 58.005 30.769 7.05 0.00 31.88 1.28
7799 11388 8.465999 TGGCGTGAATTCTCAACATAAATAATT 58.534 29.630 7.05 0.00 31.88 1.40
7800 11389 9.301153 GGCGTGAATTCTCAACATAAATAATTT 57.699 29.630 7.05 0.00 31.88 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.178235 GCGATGGCGGGAAGTTACC 61.178 63.158 0.00 0.00 38.16 2.85
22 23 1.153429 AGCGATGGCGGGAAGTTAC 60.153 57.895 0.00 0.00 46.35 2.50
23 24 1.153449 CAGCGATGGCGGGAAGTTA 60.153 57.895 0.00 0.00 46.35 2.24
24 25 2.436646 CAGCGATGGCGGGAAGTT 60.437 61.111 0.00 0.00 46.35 2.66
62 63 1.327292 AAATCAGTTTTTCGCGCGCG 61.327 50.000 44.84 44.84 41.35 6.86
63 64 0.775861 AAAATCAGTTTTTCGCGCGC 59.224 45.000 27.95 23.91 33.89 6.86
64 65 2.337352 GGTAAAATCAGTTTTTCGCGCG 59.663 45.455 26.76 26.76 38.47 6.86
65 66 3.118972 GTGGTAAAATCAGTTTTTCGCGC 59.881 43.478 0.00 0.00 38.47 6.86
66 67 3.356658 CGTGGTAAAATCAGTTTTTCGCG 59.643 43.478 0.00 0.00 38.47 5.87
67 68 3.118972 GCGTGGTAAAATCAGTTTTTCGC 59.881 43.478 5.32 5.32 38.47 4.70
68 69 3.356658 CGCGTGGTAAAATCAGTTTTTCG 59.643 43.478 0.00 0.00 38.47 3.46
69 70 3.666797 CCGCGTGGTAAAATCAGTTTTTC 59.333 43.478 6.91 0.00 38.47 2.29
70 71 3.551250 CCCGCGTGGTAAAATCAGTTTTT 60.551 43.478 15.14 0.00 40.59 1.94
71 72 2.030628 CCCGCGTGGTAAAATCAGTTTT 60.031 45.455 15.14 0.00 40.48 2.43
72 73 1.538075 CCCGCGTGGTAAAATCAGTTT 59.462 47.619 15.14 0.00 0.00 2.66
73 74 1.161843 CCCGCGTGGTAAAATCAGTT 58.838 50.000 15.14 0.00 0.00 3.16
74 75 1.303091 GCCCGCGTGGTAAAATCAGT 61.303 55.000 15.14 0.00 36.04 3.41
75 76 1.427819 GCCCGCGTGGTAAAATCAG 59.572 57.895 15.14 0.00 36.04 2.90
76 77 2.392181 CGCCCGCGTGGTAAAATCA 61.392 57.895 15.14 0.00 36.04 2.57
77 78 2.401990 CGCCCGCGTGGTAAAATC 59.598 61.111 15.14 0.00 36.04 2.17
78 79 3.806422 GCGCCCGCGTGGTAAAAT 61.806 61.111 15.14 0.00 42.09 1.82
97 98 2.003443 CAACAGACGCGGCAAAACG 61.003 57.895 17.71 0.00 0.00 3.60
98 99 1.657181 CCAACAGACGCGGCAAAAC 60.657 57.895 17.71 0.00 0.00 2.43
99 100 1.781025 CTCCAACAGACGCGGCAAAA 61.781 55.000 17.71 0.00 0.00 2.44
100 101 2.203084 TCCAACAGACGCGGCAAA 60.203 55.556 17.71 0.00 0.00 3.68
101 102 2.449031 ATCTCCAACAGACGCGGCAA 62.449 55.000 17.71 0.00 32.26 4.52
102 103 2.942796 ATCTCCAACAGACGCGGCA 61.943 57.895 17.71 0.00 32.26 5.69
103 104 2.125512 ATCTCCAACAGACGCGGC 60.126 61.111 12.47 7.86 32.26 6.53
104 105 2.456119 GCATCTCCAACAGACGCGG 61.456 63.158 12.47 0.00 28.87 6.46
105 106 1.416813 GAGCATCTCCAACAGACGCG 61.417 60.000 3.53 3.53 45.48 6.01
106 107 2.378028 GAGCATCTCCAACAGACGC 58.622 57.895 0.00 0.00 40.90 5.19
118 119 1.673168 CCACAAGGCCTAAGAGCATC 58.327 55.000 5.16 0.00 0.00 3.91
119 120 3.890527 CCACAAGGCCTAAGAGCAT 57.109 52.632 5.16 0.00 0.00 3.79
207 210 7.308951 GCAACTAAAATTACCCTTCTTGTGCTA 60.309 37.037 0.00 0.00 0.00 3.49
216 219 3.158676 TGCCGCAACTAAAATTACCCTT 58.841 40.909 0.00 0.00 0.00 3.95
219 222 3.181500 CCTCTGCCGCAACTAAAATTACC 60.181 47.826 0.00 0.00 0.00 2.85
245 251 1.715785 CCAACCCACCCAATTCACTT 58.284 50.000 0.00 0.00 0.00 3.16
262 273 4.369591 ATGCACCCCTCCTCCCCA 62.370 66.667 0.00 0.00 0.00 4.96
267 278 0.691078 ATGTACGATGCACCCCTCCT 60.691 55.000 0.00 0.00 0.00 3.69
270 281 1.526887 CCATGTACGATGCACCCCT 59.473 57.895 0.00 0.00 0.00 4.79
291 302 2.238646 CCAAGTGTAGGCATGACCCTAA 59.761 50.000 0.00 0.00 39.10 2.69
341 352 7.342026 AGACCATATAAACCAAAATGGACCTTC 59.658 37.037 2.85 0.00 40.96 3.46
342 353 7.189087 AGACCATATAAACCAAAATGGACCTT 58.811 34.615 2.85 0.00 40.96 3.50
355 366 7.485277 CCGACTCGATCATTAGACCATATAAAC 59.515 40.741 0.00 0.00 0.00 2.01
372 383 6.889301 TTATCCTACATAAACCGACTCGAT 57.111 37.500 0.00 0.00 0.00 3.59
402 413 6.713762 AATTGTTTGAGTTCAGGTGAATCA 57.286 33.333 0.00 0.00 36.33 2.57
478 489 7.337184 TCGCTTGGTTTATTACATGGTATTTGA 59.663 33.333 0.00 0.00 0.00 2.69
485 496 6.130298 TGATTCGCTTGGTTTATTACATGG 57.870 37.500 0.00 0.00 0.00 3.66
494 505 3.057315 CCACAGATTGATTCGCTTGGTTT 60.057 43.478 0.00 0.00 0.00 3.27
495 506 2.489329 CCACAGATTGATTCGCTTGGTT 59.511 45.455 0.00 0.00 0.00 3.67
496 507 2.086869 CCACAGATTGATTCGCTTGGT 58.913 47.619 0.00 0.00 0.00 3.67
497 508 2.086869 ACCACAGATTGATTCGCTTGG 58.913 47.619 0.00 0.00 0.00 3.61
498 509 3.495193 CAACCACAGATTGATTCGCTTG 58.505 45.455 0.00 0.00 0.00 4.01
499 510 2.489329 CCAACCACAGATTGATTCGCTT 59.511 45.455 0.00 0.00 0.00 4.68
500 511 2.086869 CCAACCACAGATTGATTCGCT 58.913 47.619 0.00 0.00 0.00 4.93
501 512 2.083774 TCCAACCACAGATTGATTCGC 58.916 47.619 0.00 0.00 0.00 4.70
507 518 5.720371 TTAACCAATCCAACCACAGATTG 57.280 39.130 5.88 5.88 45.81 2.67
508 519 5.245977 CCTTTAACCAATCCAACCACAGATT 59.754 40.000 0.00 0.00 32.95 2.40
510 521 4.148838 CCTTTAACCAATCCAACCACAGA 58.851 43.478 0.00 0.00 0.00 3.41
511 522 3.258123 CCCTTTAACCAATCCAACCACAG 59.742 47.826 0.00 0.00 0.00 3.66
512 523 3.117093 TCCCTTTAACCAATCCAACCACA 60.117 43.478 0.00 0.00 0.00 4.17
515 526 3.509967 CAGTCCCTTTAACCAATCCAACC 59.490 47.826 0.00 0.00 0.00 3.77
517 528 4.141135 TCACAGTCCCTTTAACCAATCCAA 60.141 41.667 0.00 0.00 0.00 3.53
519 530 4.028993 TCACAGTCCCTTTAACCAATCC 57.971 45.455 0.00 0.00 0.00 3.01
521 532 6.833933 GGAATATCACAGTCCCTTTAACCAAT 59.166 38.462 0.00 0.00 35.23 3.16
522 533 6.184789 GGAATATCACAGTCCCTTTAACCAA 58.815 40.000 0.00 0.00 35.23 3.67
532 543 2.262423 GGCTGGGAATATCACAGTCC 57.738 55.000 11.00 8.86 46.33 3.85
537 548 2.553904 CCTGATGGGCTGGGAATATCAC 60.554 54.545 0.00 0.00 32.31 3.06
539 550 1.707427 ACCTGATGGGCTGGGAATATC 59.293 52.381 0.00 0.00 39.75 1.63
540 551 1.838611 ACCTGATGGGCTGGGAATAT 58.161 50.000 0.00 0.00 39.75 1.28
542 553 0.712380 AAACCTGATGGGCTGGGAAT 59.288 50.000 0.00 0.00 39.75 3.01
543 554 0.039618 GAAACCTGATGGGCTGGGAA 59.960 55.000 0.00 0.00 39.75 3.97
544 555 1.139498 TGAAACCTGATGGGCTGGGA 61.139 55.000 0.00 0.00 39.75 4.37
545 556 0.251742 TTGAAACCTGATGGGCTGGG 60.252 55.000 0.00 0.00 39.75 4.45
546 557 1.180029 CTTGAAACCTGATGGGCTGG 58.820 55.000 0.00 0.00 41.12 4.85
547 558 1.815003 GACTTGAAACCTGATGGGCTG 59.185 52.381 0.00 0.00 39.10 4.85
548 559 1.272147 GGACTTGAAACCTGATGGGCT 60.272 52.381 0.00 0.00 39.10 5.19
549 560 1.177401 GGACTTGAAACCTGATGGGC 58.823 55.000 0.00 0.00 39.10 5.36
550 561 2.887151 AGGACTTGAAACCTGATGGG 57.113 50.000 0.00 0.00 41.89 4.00
556 567 0.846693 AGCACCAGGACTTGAAACCT 59.153 50.000 0.00 0.00 36.92 3.50
557 568 1.239347 GAGCACCAGGACTTGAAACC 58.761 55.000 0.00 0.00 0.00 3.27
558 569 0.868406 CGAGCACCAGGACTTGAAAC 59.132 55.000 0.00 0.00 0.00 2.78
559 570 0.884704 GCGAGCACCAGGACTTGAAA 60.885 55.000 0.00 0.00 0.00 2.69
560 571 1.301716 GCGAGCACCAGGACTTGAA 60.302 57.895 0.00 0.00 0.00 2.69
563 574 0.250901 AAATGCGAGCACCAGGACTT 60.251 50.000 0.00 0.00 0.00 3.01
564 575 0.613260 TAAATGCGAGCACCAGGACT 59.387 50.000 0.00 0.00 0.00 3.85
565 576 1.668419 ATAAATGCGAGCACCAGGAC 58.332 50.000 0.00 0.00 0.00 3.85
566 577 2.418368 AATAAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
568 579 3.488047 CCAGAAATAAATGCGAGCACCAG 60.488 47.826 0.00 0.00 0.00 4.00
569 580 2.423185 CCAGAAATAAATGCGAGCACCA 59.577 45.455 0.00 0.00 0.00 4.17
570 581 2.682856 TCCAGAAATAAATGCGAGCACC 59.317 45.455 0.00 0.00 0.00 5.01
571 582 4.558538 ATCCAGAAATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
572 583 5.581126 AAATCCAGAAATAAATGCGAGCA 57.419 34.783 0.00 0.00 0.00 4.26
573 584 8.579682 AAATAAATCCAGAAATAAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
574 585 9.734620 TGAAATAAATCCAGAAATAAATGCGAG 57.265 29.630 0.00 0.00 0.00 5.03
575 586 9.734620 CTGAAATAAATCCAGAAATAAATGCGA 57.265 29.630 0.00 0.00 0.00 5.10
587 598 6.197096 CGCCGAAAATTCTGAAATAAATCCAG 59.803 38.462 0.00 0.00 0.00 3.86
589 600 6.262601 TCGCCGAAAATTCTGAAATAAATCC 58.737 36.000 0.00 0.00 0.00 3.01
590 601 7.565789 GCATCGCCGAAAATTCTGAAATAAATC 60.566 37.037 0.00 0.00 0.00 2.17
594 605 4.597079 GCATCGCCGAAAATTCTGAAATA 58.403 39.130 0.00 0.00 0.00 1.40
596 607 2.727607 CGCATCGCCGAAAATTCTGAAA 60.728 45.455 0.00 0.00 0.00 2.69
597 608 1.202020 CGCATCGCCGAAAATTCTGAA 60.202 47.619 0.00 0.00 0.00 3.02
598 609 0.373370 CGCATCGCCGAAAATTCTGA 59.627 50.000 0.00 0.00 0.00 3.27
611 622 0.575859 CTCTCACTGAATGCGCATCG 59.424 55.000 25.53 17.09 0.00 3.84
612 623 0.935898 CCTCTCACTGAATGCGCATC 59.064 55.000 25.53 17.12 0.00 3.91
614 625 0.108472 CTCCTCTCACTGAATGCGCA 60.108 55.000 14.96 14.96 0.00 6.09
616 627 1.796982 CGTCTCCTCTCACTGAATGCG 60.797 57.143 0.00 0.00 0.00 4.73
617 628 1.203523 ACGTCTCCTCTCACTGAATGC 59.796 52.381 0.00 0.00 0.00 3.56
618 629 3.506810 GAACGTCTCCTCTCACTGAATG 58.493 50.000 0.00 0.00 0.00 2.67
621 632 1.535833 GGAACGTCTCCTCTCACTGA 58.464 55.000 8.87 0.00 41.61 3.41
622 633 0.528470 GGGAACGTCTCCTCTCACTG 59.472 60.000 13.94 0.00 44.68 3.66
623 634 2.964343 GGGAACGTCTCCTCTCACT 58.036 57.895 13.94 0.00 44.68 3.41
643 654 2.099263 CCTTATGAGCGTCTCCGAAAGA 59.901 50.000 4.73 0.00 35.63 2.52
645 656 1.136305 CCCTTATGAGCGTCTCCGAAA 59.864 52.381 4.73 0.00 35.63 3.46
646 657 0.744874 CCCTTATGAGCGTCTCCGAA 59.255 55.000 4.73 0.00 35.63 4.30
647 658 0.395311 ACCCTTATGAGCGTCTCCGA 60.395 55.000 4.73 0.00 35.63 4.55
648 659 0.030908 GACCCTTATGAGCGTCTCCG 59.969 60.000 4.73 0.00 29.84 4.63
649 660 0.030908 CGACCCTTATGAGCGTCTCC 59.969 60.000 1.38 0.00 30.18 3.71
650 661 0.030908 CCGACCCTTATGAGCGTCTC 59.969 60.000 1.38 0.58 30.18 3.36
651 662 0.683504 ACCGACCCTTATGAGCGTCT 60.684 55.000 1.38 0.00 30.18 4.18
654 665 0.806102 CACACCGACCCTTATGAGCG 60.806 60.000 0.00 0.00 0.00 5.03
655 666 1.090052 GCACACCGACCCTTATGAGC 61.090 60.000 0.00 0.00 0.00 4.26
657 668 0.908910 ATGCACACCGACCCTTATGA 59.091 50.000 0.00 0.00 0.00 2.15
658 669 1.016627 CATGCACACCGACCCTTATG 58.983 55.000 0.00 0.00 0.00 1.90
659 670 0.618458 ACATGCACACCGACCCTTAT 59.382 50.000 0.00 0.00 0.00 1.73
660 671 0.321210 CACATGCACACCGACCCTTA 60.321 55.000 0.00 0.00 0.00 2.69
661 672 1.600636 CACATGCACACCGACCCTT 60.601 57.895 0.00 0.00 0.00 3.95
663 674 3.737172 GCACATGCACACCGACCC 61.737 66.667 0.00 0.00 41.59 4.46
664 675 4.088762 CGCACATGCACACCGACC 62.089 66.667 4.49 0.00 42.21 4.79
665 676 4.741781 GCGCACATGCACACCGAC 62.742 66.667 0.30 0.00 42.21 4.79
677 2042 0.457853 TCACTCCTATGAACGCGCAC 60.458 55.000 5.73 0.00 0.00 5.34
682 2047 5.859114 GTGCATATACTCACTCCTATGAACG 59.141 44.000 0.00 0.00 0.00 3.95
683 2048 5.859114 CGTGCATATACTCACTCCTATGAAC 59.141 44.000 0.00 0.00 30.06 3.18
684 2049 5.535030 ACGTGCATATACTCACTCCTATGAA 59.465 40.000 0.00 0.00 0.00 2.57
686 2051 5.157067 CACGTGCATATACTCACTCCTATG 58.843 45.833 0.82 0.00 0.00 2.23
687 2052 4.827835 ACACGTGCATATACTCACTCCTAT 59.172 41.667 17.22 0.00 0.00 2.57
688 2053 4.204799 ACACGTGCATATACTCACTCCTA 58.795 43.478 17.22 0.00 0.00 2.94
690 2055 3.438297 ACACGTGCATATACTCACTCC 57.562 47.619 17.22 0.00 0.00 3.85
691 2056 9.491934 CTTATATACACGTGCATATACTCACTC 57.508 37.037 22.52 0.00 0.00 3.51
692 2057 7.968956 GCTTATATACACGTGCATATACTCACT 59.031 37.037 22.52 4.91 0.00 3.41
693 2058 7.968956 AGCTTATATACACGTGCATATACTCAC 59.031 37.037 22.52 14.26 0.00 3.51
695 2060 8.399425 AGAGCTTATATACACGTGCATATACTC 58.601 37.037 22.52 23.09 0.00 2.59
696 2061 8.282455 AGAGCTTATATACACGTGCATATACT 57.718 34.615 22.52 18.14 0.00 2.12
697 2062 8.799091 CAAGAGCTTATATACACGTGCATATAC 58.201 37.037 22.52 14.72 0.00 1.47
699 2064 6.311445 GCAAGAGCTTATATACACGTGCATAT 59.689 38.462 21.77 21.77 37.91 1.78
700 2065 5.633601 GCAAGAGCTTATATACACGTGCATA 59.366 40.000 17.22 13.68 37.91 3.14
701 2066 4.449068 GCAAGAGCTTATATACACGTGCAT 59.551 41.667 17.22 11.52 37.91 3.96
702 2067 3.802139 GCAAGAGCTTATATACACGTGCA 59.198 43.478 17.22 2.06 37.91 4.57
703 2068 3.121328 CGCAAGAGCTTATATACACGTGC 60.121 47.826 17.22 0.00 43.02 5.34
704 2069 4.042398 ACGCAAGAGCTTATATACACGTG 58.958 43.478 15.48 15.48 43.62 4.49
705 2070 4.303086 ACGCAAGAGCTTATATACACGT 57.697 40.909 0.00 0.00 43.62 4.49
706 2071 5.005394 ACAAACGCAAGAGCTTATATACACG 59.995 40.000 0.00 0.00 43.62 4.49
707 2072 6.345920 ACAAACGCAAGAGCTTATATACAC 57.654 37.500 0.00 0.00 43.62 2.90
708 2073 7.222031 CAGTACAAACGCAAGAGCTTATATACA 59.778 37.037 0.00 0.00 43.62 2.29
709 2074 7.222224 ACAGTACAAACGCAAGAGCTTATATAC 59.778 37.037 0.00 0.00 43.62 1.47
710 2075 7.222031 CACAGTACAAACGCAAGAGCTTATATA 59.778 37.037 0.00 0.00 43.62 0.86
711 2076 6.036083 CACAGTACAAACGCAAGAGCTTATAT 59.964 38.462 0.00 0.00 43.62 0.86
712 2077 5.347635 CACAGTACAAACGCAAGAGCTTATA 59.652 40.000 0.00 0.00 43.62 0.98
714 2079 3.493129 CACAGTACAAACGCAAGAGCTTA 59.507 43.478 0.00 0.00 43.62 3.09
715 2080 2.287915 CACAGTACAAACGCAAGAGCTT 59.712 45.455 0.00 0.00 43.62 3.74
716 2081 1.867233 CACAGTACAAACGCAAGAGCT 59.133 47.619 0.00 0.00 43.62 4.09
717 2082 1.597663 ACACAGTACAAACGCAAGAGC 59.402 47.619 0.00 0.00 43.62 4.09
718 2083 3.944422 AACACAGTACAAACGCAAGAG 57.056 42.857 0.00 0.00 43.62 2.85
782 2608 6.039941 TGTGGTCATTTTTACACCGAAAATCT 59.960 34.615 0.00 0.00 35.21 2.40
825 2651 6.032956 TCGCCAGTTGAGTCTCTTTTTATA 57.967 37.500 0.65 0.00 0.00 0.98
826 2652 4.894784 TCGCCAGTTGAGTCTCTTTTTAT 58.105 39.130 0.65 0.00 0.00 1.40
844 2670 1.132640 GTGTCATTTCACGCTCGCC 59.867 57.895 0.00 0.00 0.00 5.54
896 2722 7.591006 ATCGCGAGTTTTCTCTATGTTTTTA 57.409 32.000 16.66 0.00 44.16 1.52
1242 4744 1.906824 GGCACGGGATCTCGGGATA 60.907 63.158 24.42 0.00 35.20 2.59
1291 4793 2.331166 GGGAGGGTAGGGAAGAGAATC 58.669 57.143 0.00 0.00 0.00 2.52
1304 4806 2.003548 GAGCAATCCAGGGGAGGGT 61.004 63.158 0.00 0.00 34.05 4.34
1368 4872 1.464722 CCAATTCACCCACCCCAGT 59.535 57.895 0.00 0.00 0.00 4.00
1437 4941 0.399075 AGAAACCCCGACGGAAACAT 59.601 50.000 17.49 0.00 34.64 2.71
1447 4951 2.469826 GCAAACAAAAGAGAAACCCCG 58.530 47.619 0.00 0.00 0.00 5.73
1505 5009 2.542597 TCATTACACCATAACGCGGAC 58.457 47.619 12.47 0.00 0.00 4.79
1521 5025 7.348815 TCCACAAGTTCTCCATTGATATCATT 58.651 34.615 6.17 0.00 0.00 2.57
1522 5026 6.903516 TCCACAAGTTCTCCATTGATATCAT 58.096 36.000 6.17 0.00 0.00 2.45
1860 5383 5.374071 CACGGCCTAAATCCCTTAACTAAT 58.626 41.667 0.00 0.00 0.00 1.73
1877 5400 2.472909 GCAGTATCAAGCCACGGCC 61.473 63.158 3.95 0.00 43.17 6.13
1880 5403 4.818534 ATTTATGCAGTATCAAGCCACG 57.181 40.909 0.00 0.00 0.00 4.94
1900 5423 6.418101 TGATAGAAGCAAGCAGAAACCTAAT 58.582 36.000 0.00 0.00 0.00 1.73
1923 5446 2.589014 GATTGTCTCGCCAAAAAGCTG 58.411 47.619 0.00 0.00 0.00 4.24
2143 5666 2.787994 ACTCAGATGCTGGGAACAAAG 58.212 47.619 0.58 0.00 42.06 2.77
2191 5714 1.447489 CTTCTCAGCAGCACCGAGG 60.447 63.158 0.00 0.00 0.00 4.63
2195 5718 3.533606 TTATCTCTTCTCAGCAGCACC 57.466 47.619 0.00 0.00 0.00 5.01
2202 5725 8.340618 TGTCCCAAAATTTTATCTCTTCTCAG 57.659 34.615 2.44 0.00 0.00 3.35
2366 5889 5.822519 TGTGCATACCAATTAGATTCAGTCC 59.177 40.000 0.00 0.00 0.00 3.85
2396 5919 2.805845 AGATAACCCGACGTTTCATCG 58.194 47.619 0.00 0.00 39.33 3.84
2727 6250 4.503910 ACTGAATATACGCAAAGTGAGCA 58.496 39.130 0.00 0.00 0.00 4.26
3396 6919 2.737252 CCGCACTAAAGGTTCAGAAGAC 59.263 50.000 0.00 0.00 0.00 3.01
3872 7395 2.943036 TTCTTCGGTTAGCAAAGGGT 57.057 45.000 0.00 0.00 0.00 4.34
4034 7557 5.358160 AGAAGGAACAGCAAGTAATAATGGC 59.642 40.000 0.00 0.00 0.00 4.40
4160 7686 3.239861 GCTGAGGAACAGGGACTTG 57.760 57.895 0.00 0.00 45.82 3.16
4191 7717 3.320541 AGGAAGACTGTCACTGAGAGTTG 59.679 47.826 10.06 0.00 36.30 3.16
4343 7869 8.617290 AAACCGTGAAAAGTAGAACATATCTT 57.383 30.769 0.00 0.00 39.71 2.40
4353 7879 7.318141 TCTATACAGGAAACCGTGAAAAGTAG 58.682 38.462 0.00 0.00 0.00 2.57
4439 7965 9.468532 GATATGCCCTTGTATTCAGAATTTTTC 57.531 33.333 0.00 0.00 0.00 2.29
4463 7989 4.827692 TGTTGGTCGCATAAACTGTAGAT 58.172 39.130 0.00 0.00 0.00 1.98
4492 8018 6.661669 GCAAAAGCTTTGCACATAAAGAAAT 58.338 32.000 13.54 0.00 44.34 2.17
5136 8672 3.409570 AGCCATCTACATCATCATGTGC 58.590 45.455 0.00 0.00 43.54 4.57
5208 8744 4.219288 GCAAGTCCTCCACTTCATCAATTT 59.781 41.667 0.00 0.00 44.14 1.82
5269 8805 2.918345 GCACGCAAGCCATCCACAA 61.918 57.895 0.00 0.00 45.62 3.33
5318 8854 5.490159 AGCCTCTACTACGTGATATCCTAC 58.510 45.833 0.00 0.00 0.00 3.18
5598 9156 4.394300 CAGACTCAAGGCAAAAGGACATAG 59.606 45.833 0.00 0.00 0.00 2.23
5818 9376 0.814010 ACAGCACGGGTTCTGTCAAC 60.814 55.000 0.00 0.00 39.11 3.18
5823 9381 0.813610 TCACAACAGCACGGGTTCTG 60.814 55.000 0.00 0.00 36.45 3.02
6125 9683 9.347934 CTGTTGGATACTAGCTTAATAATCTCG 57.652 37.037 0.00 0.00 37.61 4.04
6425 9983 1.714794 AGTCTTCGATTGGCAACTCG 58.285 50.000 19.22 19.22 36.25 4.18
6711 10269 8.773404 TCCTTAAGTTACTTATTCTGTTGCTC 57.227 34.615 5.60 0.00 0.00 4.26
6712 10270 7.824779 CCTCCTTAAGTTACTTATTCTGTTGCT 59.175 37.037 5.60 0.00 0.00 3.91
6713 10271 7.822822 TCCTCCTTAAGTTACTTATTCTGTTGC 59.177 37.037 5.60 0.00 0.00 4.17
6714 10272 9.372369 CTCCTCCTTAAGTTACTTATTCTGTTG 57.628 37.037 5.60 0.00 0.00 3.33
6715 10273 8.541234 CCTCCTCCTTAAGTTACTTATTCTGTT 58.459 37.037 5.60 0.00 0.00 3.16
6716 10274 7.364851 GCCTCCTCCTTAAGTTACTTATTCTGT 60.365 40.741 5.60 0.00 0.00 3.41
6717 10275 6.987404 GCCTCCTCCTTAAGTTACTTATTCTG 59.013 42.308 5.60 0.00 0.00 3.02
6718 10276 6.672657 TGCCTCCTCCTTAAGTTACTTATTCT 59.327 38.462 5.60 0.00 0.00 2.40
6719 10277 6.885922 TGCCTCCTCCTTAAGTTACTTATTC 58.114 40.000 5.60 0.00 0.00 1.75
6720 10278 6.886178 TGCCTCCTCCTTAAGTTACTTATT 57.114 37.500 5.60 0.00 0.00 1.40
6721 10279 6.886178 TTGCCTCCTCCTTAAGTTACTTAT 57.114 37.500 5.60 0.00 0.00 1.73
6722 10280 6.691255 TTTGCCTCCTCCTTAAGTTACTTA 57.309 37.500 0.03 0.03 0.00 2.24
6723 10281 5.578157 TTTGCCTCCTCCTTAAGTTACTT 57.422 39.130 2.32 2.32 0.00 2.24
6724 10282 5.627040 CGATTTGCCTCCTCCTTAAGTTACT 60.627 44.000 0.97 0.00 0.00 2.24
6725 10283 4.571176 CGATTTGCCTCCTCCTTAAGTTAC 59.429 45.833 0.97 0.00 0.00 2.50
6726 10284 4.383770 CCGATTTGCCTCCTCCTTAAGTTA 60.384 45.833 0.97 0.00 0.00 2.24
6727 10285 3.610911 CGATTTGCCTCCTCCTTAAGTT 58.389 45.455 0.97 0.00 0.00 2.66
6728 10286 2.092914 CCGATTTGCCTCCTCCTTAAGT 60.093 50.000 0.97 0.00 0.00 2.24
6729 10287 2.092914 ACCGATTTGCCTCCTCCTTAAG 60.093 50.000 0.00 0.00 0.00 1.85
6730 10288 1.913419 ACCGATTTGCCTCCTCCTTAA 59.087 47.619 0.00 0.00 0.00 1.85
6731 10289 1.580059 ACCGATTTGCCTCCTCCTTA 58.420 50.000 0.00 0.00 0.00 2.69
6732 10290 0.698818 AACCGATTTGCCTCCTCCTT 59.301 50.000 0.00 0.00 0.00 3.36
6733 10291 0.035056 CAACCGATTTGCCTCCTCCT 60.035 55.000 0.00 0.00 0.00 3.69
6734 10292 2.482326 CAACCGATTTGCCTCCTCC 58.518 57.895 0.00 0.00 0.00 4.30
7291 10873 0.038892 CACAGGTGCCAACATGAAGC 60.039 55.000 0.00 0.00 40.57 3.86
7340 10922 2.151202 ACGTACAAAGCACTGAATGGG 58.849 47.619 0.00 0.00 0.00 4.00
7550 11139 1.477558 CCTGGTTCAAGAGGCTGTGTT 60.478 52.381 0.00 0.00 0.00 3.32
7604 11193 4.101448 CTCCTGAGGGGCCAACGG 62.101 72.222 4.39 3.23 34.39 4.44
7605 11194 4.101448 CCTCCTGAGGGGCCAACG 62.101 72.222 4.39 0.00 44.87 4.10
7614 11203 2.291741 GGCGATTTTTATGCCTCCTGAG 59.708 50.000 0.00 0.00 45.40 3.35
7615 11204 2.297701 GGCGATTTTTATGCCTCCTGA 58.702 47.619 0.00 0.00 45.40 3.86
7616 11205 1.002468 CGGCGATTTTTATGCCTCCTG 60.002 52.381 0.00 0.00 46.67 3.86
7617 11206 1.308998 CGGCGATTTTTATGCCTCCT 58.691 50.000 0.00 0.00 46.67 3.69
7618 11207 0.317854 GCGGCGATTTTTATGCCTCC 60.318 55.000 12.98 0.00 46.67 4.30
7619 11208 0.317854 GGCGGCGATTTTTATGCCTC 60.318 55.000 12.98 0.00 46.67 4.70
7620 11209 1.733526 GGCGGCGATTTTTATGCCT 59.266 52.632 12.98 0.00 46.67 4.75
7621 11210 0.948678 TAGGCGGCGATTTTTATGCC 59.051 50.000 12.98 0.00 45.39 4.40
7622 11211 1.069227 CCTAGGCGGCGATTTTTATGC 60.069 52.381 12.98 0.00 0.00 3.14
7623 11212 2.480419 CTCCTAGGCGGCGATTTTTATG 59.520 50.000 12.98 0.00 0.00 1.90
7624 11213 2.104281 ACTCCTAGGCGGCGATTTTTAT 59.896 45.455 12.98 0.00 0.00 1.40
7625 11214 1.483415 ACTCCTAGGCGGCGATTTTTA 59.517 47.619 12.98 0.00 0.00 1.52
7626 11215 0.252197 ACTCCTAGGCGGCGATTTTT 59.748 50.000 12.98 0.00 0.00 1.94
7627 11216 0.179081 GACTCCTAGGCGGCGATTTT 60.179 55.000 12.98 0.00 0.00 1.82
7628 11217 1.327690 TGACTCCTAGGCGGCGATTT 61.328 55.000 12.98 0.00 0.00 2.17
7629 11218 1.739338 CTGACTCCTAGGCGGCGATT 61.739 60.000 12.98 0.00 0.00 3.34
7630 11219 2.123854 TGACTCCTAGGCGGCGAT 60.124 61.111 12.98 0.00 0.00 4.58
7631 11220 2.829003 CTGACTCCTAGGCGGCGA 60.829 66.667 12.98 0.00 0.00 5.54
7636 11225 4.228567 GCCGGCTGACTCCTAGGC 62.229 72.222 22.15 0.00 37.61 3.93
7637 11226 3.905678 CGCCGGCTGACTCCTAGG 61.906 72.222 26.68 0.82 0.00 3.02
7638 11227 3.905678 CCGCCGGCTGACTCCTAG 61.906 72.222 26.68 4.88 0.00 3.02
7639 11228 2.635787 ATACCGCCGGCTGACTCCTA 62.636 60.000 25.71 6.22 0.00 2.94
7640 11229 2.635787 TATACCGCCGGCTGACTCCT 62.636 60.000 25.71 3.84 0.00 3.69
7641 11230 1.741327 TTATACCGCCGGCTGACTCC 61.741 60.000 25.71 0.00 0.00 3.85
7642 11231 0.317479 ATTATACCGCCGGCTGACTC 59.683 55.000 25.71 0.00 0.00 3.36
7643 11232 0.317479 GATTATACCGCCGGCTGACT 59.683 55.000 25.71 12.91 0.00 3.41
7644 11233 1.007336 CGATTATACCGCCGGCTGAC 61.007 60.000 25.71 6.06 0.00 3.51
7645 11234 1.287815 CGATTATACCGCCGGCTGA 59.712 57.895 25.71 9.72 0.00 4.26
7646 11235 1.736645 CCGATTATACCGCCGGCTG 60.737 63.158 26.68 21.87 35.29 4.85
7647 11236 2.654877 CCGATTATACCGCCGGCT 59.345 61.111 26.68 9.55 35.29 5.52
7649 11238 1.445582 GAGCCGATTATACCGCCGG 60.446 63.158 0.00 0.00 44.34 6.13
7650 11239 0.732880 CAGAGCCGATTATACCGCCG 60.733 60.000 0.00 0.00 0.00 6.46
7651 11240 0.389948 CCAGAGCCGATTATACCGCC 60.390 60.000 0.00 0.00 0.00 6.13
7652 11241 0.389948 CCCAGAGCCGATTATACCGC 60.390 60.000 0.00 0.00 0.00 5.68
7653 11242 0.246635 CCCCAGAGCCGATTATACCG 59.753 60.000 0.00 0.00 0.00 4.02
7654 11243 0.036294 GCCCCAGAGCCGATTATACC 60.036 60.000 0.00 0.00 0.00 2.73
7655 11244 0.389948 CGCCCCAGAGCCGATTATAC 60.390 60.000 0.00 0.00 0.00 1.47
7656 11245 1.541310 CCGCCCCAGAGCCGATTATA 61.541 60.000 0.00 0.00 0.00 0.98
7657 11246 2.743718 CGCCCCAGAGCCGATTAT 59.256 61.111 0.00 0.00 0.00 1.28
7658 11247 3.546543 CCGCCCCAGAGCCGATTA 61.547 66.667 0.00 0.00 0.00 1.75
7665 11254 3.636231 TGTCCAACCGCCCCAGAG 61.636 66.667 0.00 0.00 0.00 3.35
7666 11255 3.948719 GTGTCCAACCGCCCCAGA 61.949 66.667 0.00 0.00 0.00 3.86
7667 11256 3.901797 GAGTGTCCAACCGCCCCAG 62.902 68.421 0.00 0.00 0.00 4.45
7668 11257 3.948719 GAGTGTCCAACCGCCCCA 61.949 66.667 0.00 0.00 0.00 4.96
7669 11258 3.901797 CTGAGTGTCCAACCGCCCC 62.902 68.421 0.00 0.00 0.00 5.80
7670 11259 2.358737 CTGAGTGTCCAACCGCCC 60.359 66.667 0.00 0.00 0.00 6.13
7671 11260 3.050275 GCTGAGTGTCCAACCGCC 61.050 66.667 0.00 0.00 0.00 6.13
7672 11261 3.050275 GGCTGAGTGTCCAACCGC 61.050 66.667 0.00 0.00 0.00 5.68
7673 11262 2.738521 CGGCTGAGTGTCCAACCG 60.739 66.667 0.00 0.00 39.07 4.44
7674 11263 1.668151 GACGGCTGAGTGTCCAACC 60.668 63.158 0.00 0.00 0.00 3.77
7675 11264 2.022129 CGACGGCTGAGTGTCCAAC 61.022 63.158 0.00 0.00 0.00 3.77
7676 11265 2.338620 CGACGGCTGAGTGTCCAA 59.661 61.111 0.00 0.00 0.00 3.53
7677 11266 4.357947 GCGACGGCTGAGTGTCCA 62.358 66.667 0.00 0.00 35.83 4.02
7704 11293 1.501741 CAAAAGTGGGCCGACATCG 59.498 57.895 20.91 1.50 39.44 3.84
7705 11294 1.883021 CCAAAAGTGGGCCGACATC 59.117 57.895 20.91 0.00 41.77 3.06
7706 11295 4.095590 CCAAAAGTGGGCCGACAT 57.904 55.556 20.91 5.00 41.77 3.06
7726 11315 1.531149 CGCCGATATCGAGCCATTTTT 59.469 47.619 26.32 0.00 43.02 1.94
7727 11316 1.148310 CGCCGATATCGAGCCATTTT 58.852 50.000 26.32 0.00 43.02 1.82
7728 11317 1.291877 GCGCCGATATCGAGCCATTT 61.292 55.000 26.32 0.00 43.02 2.32
7729 11318 1.738099 GCGCCGATATCGAGCCATT 60.738 57.895 26.32 0.00 43.02 3.16
7730 11319 2.125912 GCGCCGATATCGAGCCAT 60.126 61.111 26.32 0.00 43.02 4.40
7731 11320 4.700365 CGCGCCGATATCGAGCCA 62.700 66.667 26.32 0.00 43.02 4.75
7732 11321 3.891586 TTCGCGCCGATATCGAGCC 62.892 63.158 26.32 17.58 43.02 4.70
7733 11322 1.734359 GATTCGCGCCGATATCGAGC 61.734 60.000 26.32 25.73 43.02 5.03
7734 11323 1.456678 CGATTCGCGCCGATATCGAG 61.457 60.000 26.32 19.15 42.77 4.04
7735 11324 1.511254 CGATTCGCGCCGATATCGA 60.511 57.895 26.32 5.51 42.77 3.59
7736 11325 2.497092 CCGATTCGCGCCGATATCG 61.497 63.158 18.31 18.31 41.45 2.92
7737 11326 2.789203 GCCGATTCGCGCCGATATC 61.789 63.158 14.90 7.79 39.11 1.63
7738 11327 2.809601 GCCGATTCGCGCCGATAT 60.810 61.111 14.90 0.00 39.11 1.63
7743 11332 4.980805 TATGGGCCGATTCGCGCC 62.981 66.667 22.60 22.60 40.78 6.53
7744 11333 2.240612 GAATATGGGCCGATTCGCGC 62.241 60.000 5.24 0.00 41.78 6.86
7745 11334 1.787847 GAATATGGGCCGATTCGCG 59.212 57.895 5.24 0.00 40.47 5.87
7746 11335 1.787847 CGAATATGGGCCGATTCGC 59.212 57.895 29.04 9.13 45.41 4.70
7748 11337 1.068474 CGTCGAATATGGGCCGATTC 58.932 55.000 17.03 17.03 34.71 2.52
7749 11338 0.391597 ACGTCGAATATGGGCCGATT 59.608 50.000 5.24 0.02 34.71 3.34
7750 11339 0.319555 CACGTCGAATATGGGCCGAT 60.320 55.000 5.29 5.29 34.71 4.18
7751 11340 1.066752 CACGTCGAATATGGGCCGA 59.933 57.895 0.00 0.00 0.00 5.54
7752 11341 1.954146 CCACGTCGAATATGGGCCG 60.954 63.158 0.00 0.00 0.00 6.13
7753 11342 0.463116 AACCACGTCGAATATGGGCC 60.463 55.000 13.72 0.00 37.86 5.80
7754 11343 1.063469 CAAACCACGTCGAATATGGGC 59.937 52.381 13.72 0.00 37.86 5.36
7755 11344 1.668751 CCAAACCACGTCGAATATGGG 59.331 52.381 13.72 2.77 37.86 4.00
7756 11345 1.063469 GCCAAACCACGTCGAATATGG 59.937 52.381 0.00 8.86 39.57 2.74
7757 11346 1.267334 CGCCAAACCACGTCGAATATG 60.267 52.381 0.00 0.00 0.00 1.78
7758 11347 1.003851 CGCCAAACCACGTCGAATAT 58.996 50.000 0.00 0.00 0.00 1.28
7759 11348 0.319727 ACGCCAAACCACGTCGAATA 60.320 50.000 0.00 0.00 38.28 1.75
7760 11349 1.595929 ACGCCAAACCACGTCGAAT 60.596 52.632 0.00 0.00 38.28 3.34
7761 11350 2.202905 ACGCCAAACCACGTCGAA 60.203 55.556 0.00 0.00 38.28 3.71
7762 11351 2.902759 TTCACGCCAAACCACGTCGA 62.903 55.000 0.00 0.00 41.32 4.20
7763 11352 1.837538 ATTCACGCCAAACCACGTCG 61.838 55.000 0.00 0.00 41.32 5.12
7764 11353 0.309612 AATTCACGCCAAACCACGTC 59.690 50.000 0.00 0.00 41.32 4.34
7765 11354 0.309612 GAATTCACGCCAAACCACGT 59.690 50.000 0.00 0.00 44.75 4.49
7766 11355 0.591170 AGAATTCACGCCAAACCACG 59.409 50.000 8.44 0.00 0.00 4.94
7767 11356 1.606668 TGAGAATTCACGCCAAACCAC 59.393 47.619 8.44 0.00 0.00 4.16
7768 11357 1.974265 TGAGAATTCACGCCAAACCA 58.026 45.000 8.44 0.00 0.00 3.67
7769 11358 2.034053 TGTTGAGAATTCACGCCAAACC 59.966 45.455 8.44 0.00 31.71 3.27
7770 11359 3.347958 TGTTGAGAATTCACGCCAAAC 57.652 42.857 8.44 2.91 31.71 2.93
7771 11360 5.697473 TTATGTTGAGAATTCACGCCAAA 57.303 34.783 8.44 0.00 31.71 3.28
7772 11361 5.697473 TTTATGTTGAGAATTCACGCCAA 57.303 34.783 8.44 3.67 31.71 4.52
7773 11362 5.895636 ATTTATGTTGAGAATTCACGCCA 57.104 34.783 8.44 2.70 31.71 5.69
7774 11363 8.856490 AATTATTTATGTTGAGAATTCACGCC 57.144 30.769 8.44 0.00 31.71 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.