Multiple sequence alignment - TraesCS4B01G174900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G174900 chr4B 100.000 2971 0 0 3653 6623 383645308 383648278 0.000000e+00 5487.0
1 TraesCS4B01G174900 chr4B 100.000 2656 0 0 6987 9642 383648642 383651297 0.000000e+00 4905.0
2 TraesCS4B01G174900 chr4B 100.000 1600 0 0 1 1600 383641656 383643255 0.000000e+00 2955.0
3 TraesCS4B01G174900 chr4B 100.000 1323 0 0 1803 3125 383643458 383644780 0.000000e+00 2444.0
4 TraesCS4B01G174900 chr4B 91.795 975 67 4 3653 4620 574230417 574231385 0.000000e+00 1345.0
5 TraesCS4B01G174900 chr4B 91.765 85 7 0 6375 6459 383648094 383648178 1.700000e-22 119.0
6 TraesCS4B01G174900 chr4A 95.050 2020 60 15 7128 9131 170115760 170113765 0.000000e+00 3140.0
7 TraesCS4B01G174900 chr4A 94.802 1058 42 8 2074 3125 170117716 170116666 0.000000e+00 1637.0
8 TraesCS4B01G174900 chr4A 93.511 940 22 5 4823 5754 170116665 170115757 0.000000e+00 1362.0
9 TraesCS4B01G174900 chr4A 92.536 844 34 15 778 1600 170119097 170118262 0.000000e+00 1182.0
10 TraesCS4B01G174900 chr4A 90.851 787 50 13 1 776 170120260 170119485 0.000000e+00 1035.0
11 TraesCS4B01G174900 chr4A 91.176 272 6 4 1804 2075 170118229 170117976 4.280000e-93 353.0
12 TraesCS4B01G174900 chr4A 88.435 147 9 6 6988 7132 728470942 728471082 4.630000e-38 171.0
13 TraesCS4B01G174900 chr4A 86.806 144 13 4 6987 7129 645732551 645732413 1.300000e-33 156.0
14 TraesCS4B01G174900 chr4A 85.417 144 15 4 6987 7129 645765647 645765509 2.810000e-30 145.0
15 TraesCS4B01G174900 chr4A 95.775 71 3 0 5930 6000 614419645 614419715 2.200000e-21 115.0
16 TraesCS4B01G174900 chr4D 94.814 1697 57 11 7128 8806 307246087 307247770 0.000000e+00 2617.0
17 TraesCS4B01G174900 chr4D 93.856 944 42 9 1826 2756 307243711 307244651 0.000000e+00 1408.0
18 TraesCS4B01G174900 chr4D 93.976 664 27 6 929 1588 307242673 307243327 0.000000e+00 992.0
19 TraesCS4B01G174900 chr4D 90.737 475 30 7 316 776 307241621 307242095 1.060000e-173 621.0
20 TraesCS4B01G174900 chr4D 92.408 382 20 5 2739 3119 307244668 307245041 3.960000e-148 536.0
21 TraesCS4B01G174900 chr4D 86.806 432 40 8 5184 5608 309941687 309942108 5.270000e-127 466.0
22 TraesCS4B01G174900 chr4D 89.535 344 13 5 8803 9131 307247811 307248146 1.940000e-111 414.0
23 TraesCS4B01G174900 chr4D 91.667 288 18 3 4901 5183 307245610 307245896 2.520000e-105 394.0
24 TraesCS4B01G174900 chr4D 87.889 289 26 3 1 289 307241344 307241623 2.010000e-86 331.0
25 TraesCS4B01G174900 chr4D 85.663 279 25 9 5335 5608 365394350 365394618 7.370000e-71 279.0
26 TraesCS4B01G174900 chr4D 93.103 145 8 2 778 920 307242491 307242635 2.730000e-50 211.0
27 TraesCS4B01G174900 chr4D 89.344 122 12 1 9312 9432 194378826 194378705 1.680000e-32 152.0
28 TraesCS4B01G174900 chr4D 86.486 148 6 10 9495 9640 307248186 307248321 6.030000e-32 150.0
29 TraesCS4B01G174900 chr4D 94.382 89 2 2 5670 5755 307246003 307246091 6.080000e-27 134.0
30 TraesCS4B01G174900 chr2B 93.203 971 52 6 3653 4620 696369068 696370027 0.000000e+00 1415.0
31 TraesCS4B01G174900 chr2B 92.733 977 58 4 3653 4619 731714150 731715123 0.000000e+00 1399.0
32 TraesCS4B01G174900 chr2B 91.349 971 72 5 3653 4620 530268442 530269403 0.000000e+00 1317.0
33 TraesCS4B01G174900 chr2B 85.784 408 39 9 5209 5608 6061091 6060695 1.940000e-111 414.0
34 TraesCS4B01G174900 chr2B 82.778 360 38 12 5184 5537 774702496 774702837 5.660000e-77 300.0
35 TraesCS4B01G174900 chr2B 81.200 250 39 6 5754 6000 65418764 65418520 2.750000e-45 195.0
36 TraesCS4B01G174900 chr2B 94.253 87 5 0 9183 9269 578606862 578606948 6.080000e-27 134.0
37 TraesCS4B01G174900 chr1B 92.426 977 62 5 3653 4620 589775944 589776917 0.000000e+00 1384.0
38 TraesCS4B01G174900 chr1B 92.189 973 65 7 3653 4620 446284489 446283523 0.000000e+00 1365.0
39 TraesCS4B01G174900 chr1B 91.897 975 67 5 3653 4620 13066041 13067010 0.000000e+00 1352.0
40 TraesCS4B01G174900 chr1B 93.720 207 12 1 4617 4823 446282283 446282078 9.400000e-80 309.0
41 TraesCS4B01G174900 chr1B 90.230 174 8 4 5434 5606 600376217 600376382 1.630000e-52 219.0
42 TraesCS4B01G174900 chr1B 92.632 95 6 1 9186 9280 585549308 585549401 1.690000e-27 135.0
43 TraesCS4B01G174900 chr1B 94.186 86 5 0 9185 9270 636662603 636662518 2.180000e-26 132.0
44 TraesCS4B01G174900 chr7D 92.363 969 59 7 3653 4617 8853967 8853010 0.000000e+00 1365.0
45 TraesCS4B01G174900 chr7D 93.720 207 13 0 4617 4823 608224508 608224302 2.610000e-80 311.0
46 TraesCS4B01G174900 chr7D 92.857 210 13 2 4617 4826 8851785 8851578 4.380000e-78 303.0
47 TraesCS4B01G174900 chr7D 87.190 242 18 7 5370 5608 575406296 575406065 7.430000e-66 263.0
48 TraesCS4B01G174900 chr7D 91.053 190 15 2 9308 9495 182428101 182427912 1.240000e-63 255.0
49 TraesCS4B01G174900 chr7D 93.277 119 8 0 6249 6367 627120249 627120131 9.950000e-40 176.0
50 TraesCS4B01G174900 chr7D 90.722 97 1 2 6164 6260 627120369 627120281 1.320000e-23 122.0
51 TraesCS4B01G174900 chr3B 95.626 823 33 3 5754 6575 708013217 708014037 0.000000e+00 1317.0
52 TraesCS4B01G174900 chr3B 93.662 142 4 3 6987 7127 708014218 708014355 3.530000e-49 207.0
53 TraesCS4B01G174900 chr3B 91.765 85 6 1 6375 6459 708013902 708013985 6.120000e-22 117.0
54 TraesCS4B01G174900 chr3B 100.000 47 0 0 6577 6623 708014061 708014107 4.800000e-13 87.9
55 TraesCS4B01G174900 chr6B 90.807 979 64 13 3653 4620 169238455 169239418 0.000000e+00 1286.0
56 TraesCS4B01G174900 chr6B 94.800 827 31 2 5750 6575 704099520 704100335 0.000000e+00 1279.0
57 TraesCS4B01G174900 chr6B 93.720 207 12 1 4617 4823 642926083 642926288 9.400000e-80 309.0
58 TraesCS4B01G174900 chr6B 95.890 146 4 2 6987 7131 704100495 704100639 1.620000e-57 235.0
59 TraesCS4B01G174900 chr6B 96.000 100 0 2 5905 6000 468012726 468012825 1.000000e-34 159.0
60 TraesCS4B01G174900 chr6B 95.294 85 4 0 6375 6459 704100199 704100283 1.690000e-27 135.0
61 TraesCS4B01G174900 chr6B 89.899 99 10 0 9172 9270 177277053 177277151 2.830000e-25 128.0
62 TraesCS4B01G174900 chr6B 78.947 209 25 14 5757 5961 688752407 688752214 3.660000e-24 124.0
63 TraesCS4B01G174900 chr6B 87.273 110 10 3 6450 6555 33632720 33632829 1.320000e-23 122.0
64 TraesCS4B01G174900 chr6B 86.047 86 8 3 6378 6459 33632712 33632797 1.330000e-13 89.8
65 TraesCS4B01G174900 chr6B 97.917 48 1 0 9385 9432 28739737 28739784 6.210000e-12 84.2
66 TraesCS4B01G174900 chr6B 93.617 47 1 1 6577 6623 704100359 704100403 1.740000e-07 69.4
67 TraesCS4B01G174900 chr7B 93.254 504 26 5 5754 6256 598196603 598197099 0.000000e+00 736.0
68 TraesCS4B01G174900 chr7B 90.909 506 23 9 5751 6256 702649993 702650475 0.000000e+00 658.0
69 TraesCS4B01G174900 chr7B 93.720 207 12 1 4617 4823 27393125 27393330 9.400000e-80 309.0
70 TraesCS4B01G174900 chr7B 95.973 149 6 0 6249 6397 702650516 702650664 9.670000e-60 243.0
71 TraesCS4B01G174900 chr7B 93.662 142 4 3 6987 7127 702657786 702657923 3.530000e-49 207.0
72 TraesCS4B01G174900 chr7B 91.429 140 9 2 6439 6575 598206252 598206391 1.280000e-43 189.0
73 TraesCS4B01G174900 chr7B 94.958 119 6 0 6249 6367 727631239 727631357 4.600000e-43 187.0
74 TraesCS4B01G174900 chr7B 94.068 118 6 1 6458 6575 702657503 702657619 2.770000e-40 178.0
75 TraesCS4B01G174900 chr7B 89.510 143 10 2 6988 7129 598206561 598206699 9.950000e-40 176.0
76 TraesCS4B01G174900 chr7B 93.333 120 5 2 6343 6459 598206220 598206339 3.580000e-39 174.0
77 TraesCS4B01G174900 chr7B 95.960 99 4 0 6249 6347 598197140 598197238 2.790000e-35 161.0
78 TraesCS4B01G174900 chr7B 82.667 150 21 4 5754 5900 634763538 634763391 2.830000e-25 128.0
79 TraesCS4B01G174900 chr7B 90.526 95 9 0 9185 9279 744128797 744128703 1.020000e-24 126.0
80 TraesCS4B01G174900 chr7B 95.455 66 2 1 6394 6459 702657503 702657567 4.760000e-18 104.0
81 TraesCS4B01G174900 chr7B 85.417 96 6 2 6165 6260 727631114 727631201 1.030000e-14 93.5
82 TraesCS4B01G174900 chr7B 100.000 47 0 0 6577 6623 598206415 598206461 4.800000e-13 87.9
83 TraesCS4B01G174900 chr5A 86.308 409 39 5 5209 5608 44109966 44109566 6.920000e-116 429.0
84 TraesCS4B01G174900 chr5A 84.722 144 18 3 6987 7129 540475709 540475849 3.630000e-29 141.0
85 TraesCS4B01G174900 chr3D 88.011 367 26 12 5184 5543 175443297 175442942 1.500000e-112 418.0
86 TraesCS4B01G174900 chr3D 85.673 349 33 12 5184 5526 416188743 416188406 1.540000e-92 351.0
87 TraesCS4B01G174900 chr3D 93.056 144 5 4 6991 7133 583380383 583380522 1.270000e-48 206.0
88 TraesCS4B01G174900 chr3D 92.453 106 8 0 6470 6575 583380119 583380224 1.680000e-32 152.0
89 TraesCS4B01G174900 chr3D 98.592 71 1 0 5930 6000 418208513 418208443 1.020000e-24 126.0
90 TraesCS4B01G174900 chr3D 94.444 54 3 0 6406 6459 583380119 583380172 6.210000e-12 84.2
91 TraesCS4B01G174900 chr1D 82.477 428 55 8 5184 5604 6199137 6199551 3.310000e-94 357.0
92 TraesCS4B01G174900 chr1D 89.091 275 24 2 5213 5482 387562899 387563172 4.310000e-88 337.0
93 TraesCS4B01G174900 chr1D 93.396 212 12 2 4617 4827 458395911 458396121 7.270000e-81 313.0
94 TraesCS4B01G174900 chr1D 91.509 106 9 0 6470 6575 422573801 422573696 7.800000e-31 147.0
95 TraesCS4B01G174900 chr5D 94.762 210 11 0 4617 4826 458640363 458640154 2.600000e-85 327.0
96 TraesCS4B01G174900 chr5D 83.193 357 45 5 5184 5534 349873997 349873650 7.270000e-81 313.0
97 TraesCS4B01G174900 chr5D 94.118 85 5 0 9185 9269 124399638 124399722 7.860000e-26 130.0
98 TraesCS4B01G174900 chr5D 93.182 88 5 1 9183 9270 371278826 371278740 2.830000e-25 128.0
99 TraesCS4B01G174900 chr6D 94.203 207 11 1 4617 4823 277054511 277054306 2.020000e-81 315.0
100 TraesCS4B01G174900 chr6D 88.742 151 11 6 5752 5900 298954257 298954403 7.690000e-41 180.0
101 TraesCS4B01G174900 chr6D 91.129 124 9 2 9308 9429 16374102 16373979 5.990000e-37 167.0
102 TraesCS4B01G174900 chr6D 86.093 151 15 5 5751 5900 454584514 454584369 3.600000e-34 158.0
103 TraesCS4B01G174900 chr2D 94.118 204 12 0 4617 4820 638873527 638873730 2.610000e-80 311.0
104 TraesCS4B01G174900 chr2D 87.500 104 13 0 6472 6575 624648040 624647937 4.730000e-23 121.0
105 TraesCS4B01G174900 chr6A 93.333 210 13 1 4617 4826 24235545 24235337 9.400000e-80 309.0
106 TraesCS4B01G174900 chr6A 87.317 205 13 7 5752 5956 52323290 52323481 1.260000e-53 222.0
107 TraesCS4B01G174900 chr6A 77.412 425 58 23 5184 5595 58424473 58424074 1.630000e-52 219.0
108 TraesCS4B01G174900 chr6A 86.705 173 12 6 5789 5961 16649065 16649226 2.140000e-41 182.0
109 TraesCS4B01G174900 chr6A 94.186 86 4 1 9183 9268 553935358 553935442 7.860000e-26 130.0
110 TraesCS4B01G174900 chr6A 98.592 71 1 0 5930 6000 17058004 17057934 1.020000e-24 126.0
111 TraesCS4B01G174900 chr1A 78.802 434 59 17 5184 5606 91042970 91042559 2.670000e-65 261.0
112 TraesCS4B01G174900 chr2A 89.840 187 18 1 9311 9496 579968821 579968635 1.250000e-58 239.0
113 TraesCS4B01G174900 chr2A 84.211 152 20 3 6472 6623 719740274 719740127 2.810000e-30 145.0
114 TraesCS4B01G174900 chr2A 89.796 98 8 2 9183 9278 722206325 722206228 3.660000e-24 124.0
115 TraesCS4B01G174900 chr5B 89.005 191 18 2 9308 9495 432157315 432157125 5.820000e-57 233.0
116 TraesCS4B01G174900 chr5B 89.130 184 11 4 5415 5597 439956305 439956480 4.530000e-53 220.0
117 TraesCS4B01G174900 chr5B 88.312 154 10 2 5453 5606 331637571 331637716 2.770000e-40 178.0
118 TraesCS4B01G174900 chr7A 94.958 119 6 0 6249 6367 722601497 722601379 4.600000e-43 187.0
119 TraesCS4B01G174900 chr7A 89.691 97 2 3 6164 6260 722601617 722601529 6.120000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G174900 chr4B 383641656 383651297 9641 False 3182.000000 5487 98.353000 1 9642 5 chr4B.!!$F2 9641
1 TraesCS4B01G174900 chr4B 574230417 574231385 968 False 1345.000000 1345 91.795000 3653 4620 1 chr4B.!!$F1 967
2 TraesCS4B01G174900 chr4A 170113765 170120260 6495 True 1451.500000 3140 92.987667 1 9131 6 chr4A.!!$R3 9130
3 TraesCS4B01G174900 chr4D 307241344 307248321 6977 False 709.818182 2617 91.713909 1 9640 11 chr4D.!!$F3 9639
4 TraesCS4B01G174900 chr2B 696369068 696370027 959 False 1415.000000 1415 93.203000 3653 4620 1 chr2B.!!$F3 967
5 TraesCS4B01G174900 chr2B 731714150 731715123 973 False 1399.000000 1399 92.733000 3653 4619 1 chr2B.!!$F4 966
6 TraesCS4B01G174900 chr2B 530268442 530269403 961 False 1317.000000 1317 91.349000 3653 4620 1 chr2B.!!$F1 967
7 TraesCS4B01G174900 chr1B 589775944 589776917 973 False 1384.000000 1384 92.426000 3653 4620 1 chr1B.!!$F3 967
8 TraesCS4B01G174900 chr1B 13066041 13067010 969 False 1352.000000 1352 91.897000 3653 4620 1 chr1B.!!$F1 967
9 TraesCS4B01G174900 chr1B 446282078 446284489 2411 True 837.000000 1365 92.954500 3653 4823 2 chr1B.!!$R2 1170
10 TraesCS4B01G174900 chr7D 8851578 8853967 2389 True 834.000000 1365 92.610000 3653 4826 2 chr7D.!!$R4 1173
11 TraesCS4B01G174900 chr3B 708013217 708014355 1138 False 432.225000 1317 95.263250 5754 7127 4 chr3B.!!$F1 1373
12 TraesCS4B01G174900 chr6B 169238455 169239418 963 False 1286.000000 1286 90.807000 3653 4620 1 chr6B.!!$F2 967
13 TraesCS4B01G174900 chr6B 704099520 704100639 1119 False 429.600000 1279 94.900250 5750 7131 4 chr6B.!!$F7 1381
14 TraesCS4B01G174900 chr7B 702649993 702650664 671 False 450.500000 658 93.441000 5751 6397 2 chr7B.!!$F4 646
15 TraesCS4B01G174900 chr7B 598196603 598197238 635 False 448.500000 736 94.607000 5754 6347 2 chr7B.!!$F2 593

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
920 1369 0.321996 AGAAGGGAAGAGAACGCCAC 59.678 55.000 0.00 0.0 0.00 5.01 F
921 1370 0.321996 GAAGGGAAGAGAACGCCACT 59.678 55.000 0.00 0.0 0.00 4.00 F
2695 3611 0.676466 TTGGTGCCAGAGGTTATGCG 60.676 55.000 0.00 0.0 0.00 4.73 F
2774 3724 3.942829 TCTGATTACAAACCTGAGCTGG 58.057 45.455 0.00 0.0 0.00 4.85 F
2905 3855 6.122964 GGAGATCTACTTTAAGTTTGGCCAT 58.877 40.000 6.09 0.0 0.00 4.40 F
3982 4949 1.002624 GTGGAAGGCGGATGTGGAA 60.003 57.895 0.00 0.0 0.00 3.53 F
4702 7023 1.110442 TTTGAATATGGGGCGCCTTG 58.890 50.000 28.56 0.0 0.00 3.61 F
5488 8319 0.107831 AAGCCCAGTAAACGCAGACA 59.892 50.000 0.00 0.0 0.00 3.41 F
5493 8324 0.161658 CAGTAAACGCAGACACGCAG 59.838 55.000 0.00 0.0 36.19 5.18 F
5541 8372 0.727398 GCTGCCCACGTCATAAACTC 59.273 55.000 0.00 0.0 0.00 3.01 F
5606 8437 0.759436 GCCCTCTCCCATAGTTCGGA 60.759 60.000 0.00 0.0 0.00 4.55 F
5607 8438 1.041437 CCCTCTCCCATAGTTCGGAC 58.959 60.000 0.00 0.0 0.00 4.79 F
5611 8442 1.412710 TCTCCCATAGTTCGGACATGC 59.587 52.381 0.00 0.0 0.00 4.06 F
7420 10426 1.535028 TGTTGATTGTGCGCTAGGTTG 59.465 47.619 9.73 0.0 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2774 3724 0.729690 GGCTTGATTCGAGCTTGGAC 59.270 55.000 22.25 4.89 40.49 4.02 R
2783 3733 0.962356 ACCTGGCTTGGCTTGATTCG 60.962 55.000 0.00 0.00 0.00 3.34 R
3772 4724 0.744281 GAGAAGAGAGGGAAGCCGAG 59.256 60.000 0.00 0.00 0.00 4.63 R
3817 4771 2.042230 GGCGGAAGGGTAGGGAGA 60.042 66.667 0.00 0.00 0.00 3.71 R
4518 5513 2.044555 TCGCCGAGGTCAATCGAGT 61.045 57.895 0.00 0.00 45.56 4.18 R
5200 8026 0.038166 TGAACTGATGAAGTGGGCCC 59.962 55.000 17.59 17.59 39.81 5.80 R
6302 9285 0.249398 GCTCGACCTTGCCCTTCTTA 59.751 55.000 0.00 0.00 0.00 2.10 R
6575 9558 2.028484 ACACCTACCGCACACACG 59.972 61.111 0.00 0.00 0.00 4.49 R
7366 10372 3.525800 ACCTCAGCCCACTTGTTAATT 57.474 42.857 0.00 0.00 0.00 1.40 R
7428 10434 5.880332 ACCACCTTTATATGTAACTGCACAG 59.120 40.000 0.00 0.00 0.00 3.66 R
7812 10819 8.853077 TGAAACTCAGTCATGACTATGAAAAT 57.147 30.769 27.44 11.08 44.49 1.82 R
7855 10862 8.492673 TCATCTTTATGACCATGTTAGACAAC 57.507 34.615 0.00 0.00 37.20 3.32 R
7911 10918 6.127619 TGAGGACATCATCATATACATCCGTC 60.128 42.308 0.00 0.00 31.11 4.79 R
9402 12489 0.031721 GTTGGGTCGGCCTCGTATAG 59.968 60.000 5.77 0.00 37.69 1.31 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.241919 ACATGAAAAAGAAAAAGAACCCAAATT 57.758 25.926 0.00 0.00 0.00 1.82
127 128 5.366482 TGCTCTTAATATGCTAACCCACA 57.634 39.130 0.00 0.00 0.00 4.17
133 134 4.640771 AATATGCTAACCCACATCGGAT 57.359 40.909 0.00 0.00 36.56 4.18
140 141 0.398522 ACCCACATCGGATGCTAGGA 60.399 55.000 21.56 0.00 36.56 2.94
143 144 2.224621 CCCACATCGGATGCTAGGAAAT 60.225 50.000 17.61 0.00 36.56 2.17
145 146 3.494924 CCACATCGGATGCTAGGAAATCA 60.495 47.826 17.61 0.00 36.56 2.57
146 147 4.321718 CACATCGGATGCTAGGAAATCAT 58.678 43.478 17.61 0.00 0.00 2.45
182 183 3.561310 GCAATCAGGAATCAGCGATACAA 59.439 43.478 0.00 0.00 0.00 2.41
191 192 1.542472 TCAGCGATACAACCTTCACGA 59.458 47.619 0.00 0.00 0.00 4.35
200 201 4.301637 ACAACCTTCACGAAAAATCACC 57.698 40.909 0.00 0.00 0.00 4.02
216 217 3.713826 TCACCAGTTAAGGGATGTTCC 57.286 47.619 0.21 0.00 35.23 3.62
217 218 3.256704 TCACCAGTTAAGGGATGTTCCT 58.743 45.455 0.21 0.00 36.57 3.36
219 220 4.847512 TCACCAGTTAAGGGATGTTCCTTA 59.152 41.667 0.00 0.00 44.66 2.69
220 221 5.491078 TCACCAGTTAAGGGATGTTCCTTAT 59.509 40.000 0.67 0.00 45.60 1.73
221 222 5.590259 CACCAGTTAAGGGATGTTCCTTATG 59.410 44.000 0.67 0.00 45.60 1.90
222 223 5.253096 ACCAGTTAAGGGATGTTCCTTATGT 59.747 40.000 0.67 0.00 45.60 2.29
223 224 6.187682 CCAGTTAAGGGATGTTCCTTATGTT 58.812 40.000 0.67 0.00 45.60 2.71
224 225 6.318900 CCAGTTAAGGGATGTTCCTTATGTTC 59.681 42.308 0.67 0.00 45.60 3.18
254 255 1.876416 GCTACACCAAAACGCCTCTGA 60.876 52.381 0.00 0.00 0.00 3.27
269 270 2.355412 CCTCTGATGATGACAAGTGGCA 60.355 50.000 0.00 0.00 37.54 4.92
272 273 4.700700 TCTGATGATGACAAGTGGCATAG 58.299 43.478 0.00 0.00 45.42 2.23
292 293 4.621068 AGTGAATATGTGCCATTTGTCG 57.379 40.909 0.00 0.00 0.00 4.35
301 302 0.960364 GCCATTTGTCGCCTTCAGGA 60.960 55.000 0.00 0.00 37.39 3.86
302 303 1.533625 CCATTTGTCGCCTTCAGGAA 58.466 50.000 0.00 0.00 37.39 3.36
311 314 1.266989 CGCCTTCAGGAAGTTTTGGTC 59.733 52.381 8.14 0.00 36.72 4.02
356 359 3.025978 GGATTTGAGGATTGGTGCATGA 58.974 45.455 0.00 0.00 0.00 3.07
422 425 7.891498 TGATCTCATCATGAACCATTTCAAT 57.109 32.000 0.00 0.00 45.01 2.57
440 443 2.254546 ATGTTGCCTTTCTCACGTCA 57.745 45.000 0.00 0.00 0.00 4.35
585 592 2.344535 GCTCCCACAAGCAACACAT 58.655 52.632 0.00 0.00 42.05 3.21
595 602 5.803461 CCACAAGCAACACATCATGAATTAG 59.197 40.000 0.00 0.00 0.00 1.73
672 679 7.308589 GCACAAGAAAAAGAGCTAAGATAACCA 60.309 37.037 0.00 0.00 0.00 3.67
770 788 6.594788 AAACCATGCACACTTCTTCATATT 57.405 33.333 0.00 0.00 0.00 1.28
776 794 6.882610 TGCACACTTCTTCATATTGTCTTT 57.117 33.333 0.00 0.00 0.00 2.52
783 1229 7.393234 CACTTCTTCATATTGTCTTTTACCCCA 59.607 37.037 0.00 0.00 0.00 4.96
805 1252 5.390779 CCACTTTTGTTTTTGTCAAGGCTTG 60.391 40.000 21.17 21.17 0.00 4.01
871 1319 0.531200 AAACTCTTCTCGGGCTACGG 59.469 55.000 1.81 0.00 44.45 4.02
898 1346 2.104281 CGGGCCTAAAATAGCACTACCT 59.896 50.000 0.84 0.00 0.00 3.08
920 1369 0.321996 AGAAGGGAAGAGAACGCCAC 59.678 55.000 0.00 0.00 0.00 5.01
921 1370 0.321996 GAAGGGAAGAGAACGCCACT 59.678 55.000 0.00 0.00 0.00 4.00
922 1371 1.549170 GAAGGGAAGAGAACGCCACTA 59.451 52.381 0.00 0.00 0.00 2.74
923 1372 1.867363 AGGGAAGAGAACGCCACTAT 58.133 50.000 0.00 0.00 0.00 2.12
924 1373 1.757699 AGGGAAGAGAACGCCACTATC 59.242 52.381 0.00 0.00 0.00 2.08
925 1374 1.757699 GGGAAGAGAACGCCACTATCT 59.242 52.381 0.00 0.00 0.00 1.98
926 1375 2.223852 GGGAAGAGAACGCCACTATCTC 60.224 54.545 0.00 0.00 39.88 2.75
1092 1576 1.882989 GCAAGCTCCAGGTCTCGACT 61.883 60.000 0.00 0.00 0.00 4.18
1266 1751 3.035942 GTGTGCGTGAATTTGTGTTCTC 58.964 45.455 0.00 0.00 0.00 2.87
1318 1807 4.046618 TCTTCCTATTCCATTTTTGGGGGT 59.953 41.667 0.00 0.00 0.00 4.95
1335 1824 4.070009 GGGGGTTATAGAAAACCTATGCG 58.930 47.826 5.79 0.00 46.81 4.73
1430 1920 1.592669 GCACTCGCATCGGCTACAT 60.593 57.895 0.00 0.00 38.36 2.29
1553 2043 2.592993 TAGAGCTTTGCGCCAGGGT 61.593 57.895 4.18 0.00 40.39 4.34
1588 2078 3.857052 CAAAGCCTACGAGGATGTGTTA 58.143 45.455 5.24 0.00 34.33 2.41
1591 2081 2.427453 AGCCTACGAGGATGTGTTAGTG 59.573 50.000 5.24 0.00 37.67 2.74
1837 2473 5.497464 TTTGTCTCACTATGATGGTTCCA 57.503 39.130 0.00 0.00 0.00 3.53
1888 2524 4.579454 AGTTACTATTTCGGATGCGCTA 57.421 40.909 9.73 0.00 0.00 4.26
1978 2614 7.331026 TCAGAGGTATATTTCAAGTGTTCTGG 58.669 38.462 0.00 0.00 31.66 3.86
2000 2643 8.677300 TCTGGAAGCATATTGTTTCTAATGTTC 58.323 33.333 4.48 0.00 37.66 3.18
2211 3115 4.324099 CCTGAAACCAGAGAACATGATCCT 60.324 45.833 0.00 0.00 33.56 3.24
2213 3117 5.634118 TGAAACCAGAGAACATGATCCTTT 58.366 37.500 0.00 0.00 0.00 3.11
2224 3128 1.737838 TGATCCTTTAACAGGCTGCG 58.262 50.000 15.89 0.00 43.55 5.18
2277 3181 8.647796 ACATATCTATCCGGTTGTTCAGAAATA 58.352 33.333 0.00 0.00 0.00 1.40
2400 3304 1.938577 GATGCATTCTCGCTCATGTGT 59.061 47.619 0.00 0.00 0.00 3.72
2401 3305 2.671130 TGCATTCTCGCTCATGTGTA 57.329 45.000 0.00 0.00 0.00 2.90
2402 3306 3.183793 TGCATTCTCGCTCATGTGTAT 57.816 42.857 0.00 0.00 0.00 2.29
2403 3307 3.534554 TGCATTCTCGCTCATGTGTATT 58.465 40.909 0.00 0.00 0.00 1.89
2404 3308 3.557185 TGCATTCTCGCTCATGTGTATTC 59.443 43.478 0.00 0.00 0.00 1.75
2405 3309 3.362401 GCATTCTCGCTCATGTGTATTCG 60.362 47.826 0.00 0.00 0.00 3.34
2408 3312 4.210832 TCTCGCTCATGTGTATTCGTAG 57.789 45.455 0.00 0.00 0.00 3.51
2411 3321 3.626217 TCGCTCATGTGTATTCGTAGTCT 59.374 43.478 0.00 0.00 0.00 3.24
2519 3432 7.681939 TGTTATTTCCTAGACCAATCACAAC 57.318 36.000 0.00 0.00 0.00 3.32
2564 3477 1.625818 TGGAGGCTTCAGAAGTTCTCC 59.374 52.381 29.12 29.12 44.15 3.71
2632 3545 9.726438 GTATCTTATTTATTGGAGTGTAGGCAT 57.274 33.333 0.00 0.00 0.00 4.40
2634 3547 9.646522 ATCTTATTTATTGGAGTGTAGGCATTT 57.353 29.630 0.00 0.00 0.00 2.32
2695 3611 0.676466 TTGGTGCCAGAGGTTATGCG 60.676 55.000 0.00 0.00 0.00 4.73
2774 3724 3.942829 TCTGATTACAAACCTGAGCTGG 58.057 45.455 0.00 0.00 0.00 4.85
2894 3844 7.989947 AATGGTACTTGGGAGATCTACTTTA 57.010 36.000 4.57 0.00 0.00 1.85
2905 3855 6.122964 GGAGATCTACTTTAAGTTTGGCCAT 58.877 40.000 6.09 0.00 0.00 4.40
2926 3876 8.295288 GGCCATCAGATACATAAGAAAAATCTG 58.705 37.037 0.00 4.61 43.11 2.90
3005 3956 6.857451 TGTGTTTGAAGATTCACAAATGATCG 59.143 34.615 10.53 0.00 37.77 3.69
3048 3999 8.017946 GTGTAGGTGAAACTTTCATGAGAAATC 58.982 37.037 7.47 0.00 42.49 2.17
3889 4843 1.524621 CGTGATGGATCCCACAGCC 60.525 63.158 17.94 4.57 35.80 4.85
3890 4844 1.524621 GTGATGGATCCCACAGCCG 60.525 63.158 9.90 0.00 35.80 5.52
3891 4845 2.592861 GATGGATCCCACAGCCGC 60.593 66.667 9.90 0.00 35.80 6.53
3982 4949 1.002624 GTGGAAGGCGGATGTGGAA 60.003 57.895 0.00 0.00 0.00 3.53
4702 7023 1.110442 TTTGAATATGGGGCGCCTTG 58.890 50.000 28.56 0.00 0.00 3.61
4738 7059 2.429930 CGTGGCTGGGGAGAAACA 59.570 61.111 0.00 0.00 0.00 2.83
4764 7085 3.606662 GGGCCGATCTAGCGCTGA 61.607 66.667 22.90 15.95 39.86 4.26
4839 7160 5.940470 AGATGCTCGAATACAAGACCTTTTT 59.060 36.000 0.00 0.00 0.00 1.94
5062 7883 4.262292 GCATTGGATACGTATCTGGTACCA 60.262 45.833 29.40 15.39 42.51 3.25
5067 7888 6.069994 TGGATACGTATCTGGTACCAATACA 58.930 40.000 29.40 18.41 42.51 2.29
5069 7890 6.016024 GGATACGTATCTGGTACCAATACACA 60.016 42.308 29.40 20.89 31.60 3.72
5206 8032 1.053424 GGAGTATAATGTCGGGCCCA 58.947 55.000 24.92 6.15 0.00 5.36
5207 8033 1.270678 GGAGTATAATGTCGGGCCCAC 60.271 57.143 24.92 19.22 0.00 4.61
5211 8037 0.916086 ATAATGTCGGGCCCACTTCA 59.084 50.000 24.92 14.79 0.00 3.02
5301 8127 0.317854 GTTCAAGAACCTGCCAACGC 60.318 55.000 1.51 0.00 35.36 4.84
5365 8196 8.862085 GTCTAAGGACTAAATAAGCCTAGATGT 58.138 37.037 0.00 0.00 39.24 3.06
5373 8204 1.127343 AAGCCTAGATGTGAGAGGGC 58.873 55.000 0.00 0.00 39.82 5.19
5425 8256 0.898320 AGTTCGGACTGATGGGTGAG 59.102 55.000 0.00 0.00 33.99 3.51
5486 8317 1.202710 TCAAAGCCCAGTAAACGCAGA 60.203 47.619 0.00 0.00 0.00 4.26
5487 8318 1.069227 CAAAGCCCAGTAAACGCAGAC 60.069 52.381 0.00 0.00 0.00 3.51
5488 8319 0.107831 AAGCCCAGTAAACGCAGACA 59.892 50.000 0.00 0.00 0.00 3.41
5489 8320 0.602905 AGCCCAGTAAACGCAGACAC 60.603 55.000 0.00 0.00 0.00 3.67
5490 8321 1.897398 GCCCAGTAAACGCAGACACG 61.897 60.000 0.00 0.00 39.50 4.49
5491 8322 1.491563 CCAGTAAACGCAGACACGC 59.508 57.895 0.00 0.00 36.19 5.34
5492 8323 1.218875 CCAGTAAACGCAGACACGCA 61.219 55.000 0.00 0.00 36.19 5.24
5493 8324 0.161658 CAGTAAACGCAGACACGCAG 59.838 55.000 0.00 0.00 36.19 5.18
5541 8372 0.727398 GCTGCCCACGTCATAAACTC 59.273 55.000 0.00 0.00 0.00 3.01
5559 8390 2.815478 CTCCAAAGGAGCATAGACGTC 58.185 52.381 7.70 7.70 43.29 4.34
5563 8394 1.115467 AAGGAGCATAGACGTCAGGG 58.885 55.000 19.50 7.16 0.00 4.45
5604 8435 1.749033 GGCCCTCTCCCATAGTTCG 59.251 63.158 0.00 0.00 0.00 3.95
5605 8436 1.749033 GCCCTCTCCCATAGTTCGG 59.251 63.158 0.00 0.00 0.00 4.30
5606 8437 0.759436 GCCCTCTCCCATAGTTCGGA 60.759 60.000 0.00 0.00 0.00 4.55
5607 8438 1.041437 CCCTCTCCCATAGTTCGGAC 58.959 60.000 0.00 0.00 0.00 4.79
5608 8439 1.688311 CCCTCTCCCATAGTTCGGACA 60.688 57.143 0.00 0.00 0.00 4.02
5609 8440 2.320781 CCTCTCCCATAGTTCGGACAT 58.679 52.381 0.00 0.00 0.00 3.06
5610 8441 2.036475 CCTCTCCCATAGTTCGGACATG 59.964 54.545 0.00 0.00 0.00 3.21
5611 8442 1.412710 TCTCCCATAGTTCGGACATGC 59.587 52.381 0.00 0.00 0.00 4.06
5615 8446 1.593006 CCATAGTTCGGACATGCGTTC 59.407 52.381 0.00 0.00 0.00 3.95
5677 8508 2.531685 TTCCAGTCCCACCCCAGG 60.532 66.667 0.00 0.00 0.00 4.45
6106 8986 3.053828 GCAGCAAGCAACCATGGT 58.946 55.556 13.00 13.00 44.79 3.55
6302 9285 2.577593 GAGTTCCTAGCGGCCGTT 59.422 61.111 28.70 24.92 0.00 4.44
6341 9324 1.639298 GCGTGCGCTTCTTCAAGGAT 61.639 55.000 9.73 0.00 38.26 3.24
7059 10064 3.775654 GGGAGCCTGACTGGGACG 61.776 72.222 0.01 0.00 36.00 4.79
7060 10065 2.997897 GGAGCCTGACTGGGACGT 60.998 66.667 0.00 0.00 36.00 4.34
7131 10137 2.298729 GCCCTAGTGGAGATGCTCTAAG 59.701 54.545 1.75 0.00 35.39 2.18
7220 10226 3.998341 CCACATCAGCATTTTGGGAAAAG 59.002 43.478 0.00 0.00 33.22 2.27
7222 10228 3.647590 ACATCAGCATTTTGGGAAAAGGT 59.352 39.130 0.00 0.00 34.84 3.50
7366 10372 2.233431 GGGGTTTGTGAATGCTATGCAA 59.767 45.455 0.00 0.00 43.62 4.08
7420 10426 1.535028 TGTTGATTGTGCGCTAGGTTG 59.465 47.619 9.73 0.00 0.00 3.77
7428 10434 2.202566 GTGCGCTAGGTTGATTAGGAC 58.797 52.381 9.73 0.00 0.00 3.85
7479 10485 3.520290 TGCAAGTGTATCCCTCTTACG 57.480 47.619 0.00 0.00 0.00 3.18
7521 10527 2.889522 AGTGGCCCTCTCCCTATTTA 57.110 50.000 0.00 0.00 0.00 1.40
7812 10819 3.090790 TCATGCTGGCAAATGCTTTCTA 58.909 40.909 5.25 0.00 41.70 2.10
7911 10918 6.623486 TGACATGCATACATTCTTTTCCTTG 58.377 36.000 0.00 0.00 32.87 3.61
8163 11170 6.823689 ACAACGCCATACTTGAGAATAATCTT 59.176 34.615 0.00 0.00 35.54 2.40
8297 11304 8.704849 TCTTCAAAGATTGATGGTCCTTTTAA 57.295 30.769 6.25 0.00 39.84 1.52
8360 11367 6.715464 CCTATACACATCATTTGACCGTTTC 58.285 40.000 0.00 0.00 0.00 2.78
8361 11368 6.538742 CCTATACACATCATTTGACCGTTTCT 59.461 38.462 0.00 0.00 0.00 2.52
8363 11370 5.108385 ACACATCATTTGACCGTTTCTTC 57.892 39.130 0.00 0.00 0.00 2.87
8582 11590 4.262549 CCATGGCCTCTGATTTGAAAAACA 60.263 41.667 3.32 0.00 0.00 2.83
8699 11707 9.994432 CATGGAATAAACTCAATTCACTAAGAC 57.006 33.333 0.00 0.00 35.46 3.01
8794 11818 1.683441 AACCATCGTTGACTCCCCC 59.317 57.895 0.00 0.00 0.00 5.40
8795 11819 0.840722 AACCATCGTTGACTCCCCCT 60.841 55.000 0.00 0.00 0.00 4.79
8796 11820 0.042131 ACCATCGTTGACTCCCCCTA 59.958 55.000 0.00 0.00 0.00 3.53
8797 11821 1.344087 ACCATCGTTGACTCCCCCTAT 60.344 52.381 0.00 0.00 0.00 2.57
8878 11950 3.282885 AGAAAGGCTTAAGCTATGTGCC 58.717 45.455 25.88 9.39 44.23 5.01
8903 11975 4.378459 CGTCATTTTGCCTCCTGTTAAGAC 60.378 45.833 0.00 0.00 0.00 3.01
8904 11976 4.079253 TCATTTTGCCTCCTGTTAAGACC 58.921 43.478 0.00 0.00 0.00 3.85
8905 11977 3.876309 TTTTGCCTCCTGTTAAGACCT 57.124 42.857 0.00 0.00 0.00 3.85
8906 11978 4.986054 TTTTGCCTCCTGTTAAGACCTA 57.014 40.909 0.00 0.00 0.00 3.08
8907 11979 4.986054 TTTGCCTCCTGTTAAGACCTAA 57.014 40.909 0.00 0.00 0.00 2.69
8908 11980 4.553330 TTGCCTCCTGTTAAGACCTAAG 57.447 45.455 0.00 0.00 0.00 2.18
8909 11981 3.786553 TGCCTCCTGTTAAGACCTAAGA 58.213 45.455 0.00 0.00 0.00 2.10
8910 11982 3.769844 TGCCTCCTGTTAAGACCTAAGAG 59.230 47.826 0.00 0.00 31.96 2.85
9045 12132 2.124011 ACACTCAGTTTTTGCATGCG 57.876 45.000 14.09 0.00 0.00 4.73
9082 12169 6.071221 AGCAATATGAGTTCAGCCAAAAATGA 60.071 34.615 0.00 0.00 0.00 2.57
9115 12202 2.086054 AGAAGGCATGAACACGAGTC 57.914 50.000 0.00 0.00 0.00 3.36
9131 12218 5.163754 ACACGAGTCTAAGCCAAAAATATGC 60.164 40.000 0.00 0.00 0.00 3.14
9132 12219 5.065218 CACGAGTCTAAGCCAAAAATATGCT 59.935 40.000 0.00 0.00 36.79 3.79
9134 12221 5.967674 CGAGTCTAAGCCAAAAATATGCTTG 59.032 40.000 6.25 0.00 44.52 4.01
9136 12223 7.201609 CGAGTCTAAGCCAAAAATATGCTTGTA 60.202 37.037 6.25 0.00 44.52 2.41
9137 12224 7.989826 AGTCTAAGCCAAAAATATGCTTGTAG 58.010 34.615 6.25 0.00 44.52 2.74
9138 12225 7.611855 AGTCTAAGCCAAAAATATGCTTGTAGT 59.388 33.333 6.25 0.00 44.52 2.73
9139 12226 7.910683 GTCTAAGCCAAAAATATGCTTGTAGTC 59.089 37.037 6.25 0.00 44.52 2.59
9140 12227 5.235305 AGCCAAAAATATGCTTGTAGTCG 57.765 39.130 0.00 0.00 29.17 4.18
9141 12228 4.700213 AGCCAAAAATATGCTTGTAGTCGT 59.300 37.500 0.00 0.00 29.17 4.34
9142 12229 5.183140 AGCCAAAAATATGCTTGTAGTCGTT 59.817 36.000 0.00 0.00 29.17 3.85
9143 12230 5.286082 GCCAAAAATATGCTTGTAGTCGTTG 59.714 40.000 0.00 0.00 0.00 4.10
9144 12231 6.378582 CCAAAAATATGCTTGTAGTCGTTGT 58.621 36.000 0.00 0.00 0.00 3.32
9145 12232 7.523219 CCAAAAATATGCTTGTAGTCGTTGTA 58.477 34.615 0.00 0.00 0.00 2.41
9146 12233 8.018520 CCAAAAATATGCTTGTAGTCGTTGTAA 58.981 33.333 0.00 0.00 0.00 2.41
9147 12234 9.554724 CAAAAATATGCTTGTAGTCGTTGTAAT 57.445 29.630 0.00 0.00 0.00 1.89
9155 12242 9.953697 TGCTTGTAGTCGTTGTAATTTTTATTT 57.046 25.926 0.00 0.00 0.00 1.40
9183 12270 6.477053 TCATGAAGGATCTAAGAGTGAAGG 57.523 41.667 0.00 0.00 0.00 3.46
9184 12271 6.197903 TCATGAAGGATCTAAGAGTGAAGGA 58.802 40.000 0.00 0.00 0.00 3.36
9185 12272 6.843333 TCATGAAGGATCTAAGAGTGAAGGAT 59.157 38.462 0.00 0.00 0.00 3.24
9186 12273 6.723298 TGAAGGATCTAAGAGTGAAGGATC 57.277 41.667 0.00 0.00 34.00 3.36
9187 12274 6.439487 TGAAGGATCTAAGAGTGAAGGATCT 58.561 40.000 0.00 0.00 34.83 2.75
9188 12275 6.323482 TGAAGGATCTAAGAGTGAAGGATCTG 59.677 42.308 0.00 0.00 34.83 2.90
9189 12276 6.024563 AGGATCTAAGAGTGAAGGATCTGA 57.975 41.667 0.00 0.00 34.83 3.27
9190 12277 6.439487 AGGATCTAAGAGTGAAGGATCTGAA 58.561 40.000 0.00 0.00 34.83 3.02
9191 12278 7.075148 AGGATCTAAGAGTGAAGGATCTGAAT 58.925 38.462 0.00 0.00 34.83 2.57
9192 12279 7.015487 AGGATCTAAGAGTGAAGGATCTGAATG 59.985 40.741 0.00 0.00 34.83 2.67
9193 12280 7.201992 GGATCTAAGAGTGAAGGATCTGAATGT 60.202 40.741 0.00 0.00 34.83 2.71
9194 12281 8.774546 ATCTAAGAGTGAAGGATCTGAATGTA 57.225 34.615 0.00 0.00 0.00 2.29
9195 12282 8.595362 TCTAAGAGTGAAGGATCTGAATGTAA 57.405 34.615 0.00 0.00 0.00 2.41
9196 12283 9.206690 TCTAAGAGTGAAGGATCTGAATGTAAT 57.793 33.333 0.00 0.00 0.00 1.89
9197 12284 9.829507 CTAAGAGTGAAGGATCTGAATGTAATT 57.170 33.333 0.00 0.00 40.93 1.40
9199 12286 9.525826 AAGAGTGAAGGATCTGAATGTAATTTT 57.474 29.630 0.00 0.00 36.07 1.82
9200 12287 9.525826 AGAGTGAAGGATCTGAATGTAATTTTT 57.474 29.630 0.00 0.00 36.07 1.94
9223 12310 9.982291 TTTTATTTCTGATATTCGTTGTACTGC 57.018 29.630 0.00 0.00 0.00 4.40
9224 12311 6.604735 ATTTCTGATATTCGTTGTACTGCC 57.395 37.500 0.00 0.00 0.00 4.85
9225 12312 4.729227 TCTGATATTCGTTGTACTGCCA 57.271 40.909 0.00 0.00 0.00 4.92
9226 12313 5.276461 TCTGATATTCGTTGTACTGCCAT 57.724 39.130 0.00 0.00 0.00 4.40
9227 12314 5.049828 TCTGATATTCGTTGTACTGCCATG 58.950 41.667 0.00 0.00 0.00 3.66
9228 12315 5.017294 TGATATTCGTTGTACTGCCATGA 57.983 39.130 0.00 0.00 0.00 3.07
9229 12316 5.610398 TGATATTCGTTGTACTGCCATGAT 58.390 37.500 0.00 0.00 0.00 2.45
9230 12317 6.054941 TGATATTCGTTGTACTGCCATGATT 58.945 36.000 0.00 0.00 0.00 2.57
9231 12318 4.621068 ATTCGTTGTACTGCCATGATTG 57.379 40.909 0.00 0.00 0.00 2.67
9232 12319 3.326836 TCGTTGTACTGCCATGATTGA 57.673 42.857 0.00 0.00 0.00 2.57
9233 12320 3.669536 TCGTTGTACTGCCATGATTGAA 58.330 40.909 0.00 0.00 0.00 2.69
9234 12321 3.684305 TCGTTGTACTGCCATGATTGAAG 59.316 43.478 0.00 0.00 0.00 3.02
9235 12322 3.684305 CGTTGTACTGCCATGATTGAAGA 59.316 43.478 0.00 0.00 0.00 2.87
9236 12323 4.333649 CGTTGTACTGCCATGATTGAAGAT 59.666 41.667 0.00 0.00 0.00 2.40
9237 12324 5.575957 GTTGTACTGCCATGATTGAAGATG 58.424 41.667 0.00 0.00 0.00 2.90
9238 12325 5.101648 TGTACTGCCATGATTGAAGATGA 57.898 39.130 0.00 0.00 0.00 2.92
9239 12326 5.499313 TGTACTGCCATGATTGAAGATGAA 58.501 37.500 0.00 0.00 0.00 2.57
9240 12327 6.124340 TGTACTGCCATGATTGAAGATGAAT 58.876 36.000 0.00 0.00 0.00 2.57
9241 12328 7.281841 TGTACTGCCATGATTGAAGATGAATA 58.718 34.615 0.00 0.00 0.00 1.75
9242 12329 6.879276 ACTGCCATGATTGAAGATGAATAG 57.121 37.500 0.00 0.00 0.00 1.73
9243 12330 6.598503 ACTGCCATGATTGAAGATGAATAGA 58.401 36.000 0.00 0.00 0.00 1.98
9244 12331 7.232188 ACTGCCATGATTGAAGATGAATAGAT 58.768 34.615 0.00 0.00 0.00 1.98
9245 12332 7.724506 ACTGCCATGATTGAAGATGAATAGATT 59.275 33.333 0.00 0.00 0.00 2.40
9246 12333 9.227777 CTGCCATGATTGAAGATGAATAGATTA 57.772 33.333 0.00 0.00 0.00 1.75
9247 12334 9.577222 TGCCATGATTGAAGATGAATAGATTAA 57.423 29.630 0.00 0.00 0.00 1.40
9259 12346 8.893727 AGATGAATAGATTAAAAGTGTTTCCGG 58.106 33.333 0.00 0.00 0.00 5.14
9260 12347 8.801882 ATGAATAGATTAAAAGTGTTTCCGGA 57.198 30.769 0.00 0.00 0.00 5.14
9261 12348 8.624367 TGAATAGATTAAAAGTGTTTCCGGAA 57.376 30.769 14.35 14.35 0.00 4.30
9262 12349 9.069082 TGAATAGATTAAAAGTGTTTCCGGAAA 57.931 29.630 25.67 25.67 0.00 3.13
9288 12375 6.715347 AAAAGGCAAAGTTGTGAGTCTATT 57.285 33.333 0.00 0.00 0.00 1.73
9290 12377 5.695851 AGGCAAAGTTGTGAGTCTATTTG 57.304 39.130 0.00 0.00 0.00 2.32
9294 12381 5.820131 CAAAGTTGTGAGTCTATTTGCACA 58.180 37.500 0.00 0.00 39.27 4.57
9295 12382 5.424121 AAGTTGTGAGTCTATTTGCACAC 57.576 39.130 0.00 0.00 40.57 3.82
9296 12383 4.450976 AGTTGTGAGTCTATTTGCACACA 58.549 39.130 0.00 0.00 40.57 3.72
9297 12384 4.881273 AGTTGTGAGTCTATTTGCACACAA 59.119 37.500 10.21 10.21 42.89 3.33
9306 12393 2.215907 TTTGCACACAAATTGTCGGG 57.784 45.000 0.00 0.00 40.84 5.14
9307 12394 0.387202 TTGCACACAAATTGTCGGGG 59.613 50.000 0.00 0.00 35.67 5.73
9308 12395 1.372872 GCACACAAATTGTCGGGGC 60.373 57.895 0.00 0.00 35.67 5.80
9309 12396 1.081509 CACACAAATTGTCGGGGCG 60.082 57.895 0.00 0.00 35.67 6.13
9310 12397 2.265182 ACACAAATTGTCGGGGCGG 61.265 57.895 0.00 0.00 29.79 6.13
9311 12398 2.114411 ACAAATTGTCGGGGCGGT 59.886 55.556 0.00 0.00 0.00 5.68
9312 12399 0.956410 CACAAATTGTCGGGGCGGTA 60.956 55.000 0.00 0.00 0.00 4.02
9313 12400 0.675522 ACAAATTGTCGGGGCGGTAG 60.676 55.000 0.00 0.00 0.00 3.18
9314 12401 0.391927 CAAATTGTCGGGGCGGTAGA 60.392 55.000 0.00 0.00 0.00 2.59
9315 12402 0.392060 AAATTGTCGGGGCGGTAGAC 60.392 55.000 0.00 0.00 35.61 2.59
9316 12403 1.546589 AATTGTCGGGGCGGTAGACA 61.547 55.000 0.00 0.00 42.36 3.41
9317 12404 1.335132 ATTGTCGGGGCGGTAGACAT 61.335 55.000 0.00 0.00 43.34 3.06
9318 12405 2.106332 GTCGGGGCGGTAGACATG 59.894 66.667 0.00 0.00 35.19 3.21
9319 12406 3.151710 TCGGGGCGGTAGACATGG 61.152 66.667 0.00 0.00 0.00 3.66
9320 12407 3.151710 CGGGGCGGTAGACATGGA 61.152 66.667 0.00 0.00 0.00 3.41
9321 12408 2.504519 GGGGCGGTAGACATGGAC 59.495 66.667 0.00 0.00 0.00 4.02
9322 12409 2.064581 GGGGCGGTAGACATGGACT 61.065 63.158 0.00 0.00 0.00 3.85
9323 12410 1.144057 GGGCGGTAGACATGGACTG 59.856 63.158 0.00 0.00 0.00 3.51
9324 12411 1.144057 GGCGGTAGACATGGACTGG 59.856 63.158 0.00 0.00 0.00 4.00
9325 12412 1.144057 GCGGTAGACATGGACTGGG 59.856 63.158 0.00 0.00 0.00 4.45
9326 12413 1.823295 CGGTAGACATGGACTGGGG 59.177 63.158 0.00 0.00 0.00 4.96
9327 12414 0.976073 CGGTAGACATGGACTGGGGT 60.976 60.000 0.00 0.00 0.00 4.95
9328 12415 0.831307 GGTAGACATGGACTGGGGTC 59.169 60.000 0.00 0.00 41.43 4.46
9329 12416 0.460311 GTAGACATGGACTGGGGTCG 59.540 60.000 0.00 0.00 42.97 4.79
9330 12417 0.686441 TAGACATGGACTGGGGTCGG 60.686 60.000 0.00 0.00 42.97 4.79
9331 12418 3.009115 ACATGGACTGGGGTCGGG 61.009 66.667 0.00 0.00 42.97 5.14
9332 12419 3.797353 CATGGACTGGGGTCGGGG 61.797 72.222 0.00 0.00 42.97 5.73
9353 12440 2.582498 CGATTGCCTCGGGTCGAC 60.582 66.667 7.13 7.13 43.82 4.20
9354 12441 2.202892 GATTGCCTCGGGTCGACC 60.203 66.667 27.04 27.04 0.00 4.79
9364 12451 4.222847 GGTCGACCCTGCCGATCC 62.223 72.222 24.75 0.00 38.38 3.36
9365 12452 3.458163 GTCGACCCTGCCGATCCA 61.458 66.667 3.51 0.00 38.38 3.41
9366 12453 2.682136 TCGACCCTGCCGATCCAA 60.682 61.111 0.00 0.00 0.00 3.53
9367 12454 2.063979 TCGACCCTGCCGATCCAAT 61.064 57.895 0.00 0.00 0.00 3.16
9368 12455 1.889105 CGACCCTGCCGATCCAATG 60.889 63.158 0.00 0.00 0.00 2.82
9369 12456 1.526917 GACCCTGCCGATCCAATGG 60.527 63.158 0.00 0.00 0.00 3.16
9370 12457 2.203394 CCCTGCCGATCCAATGGG 60.203 66.667 0.00 0.00 0.00 4.00
9371 12458 2.597340 CCTGCCGATCCAATGGGT 59.403 61.111 0.00 0.00 34.93 4.51
9372 12459 1.526917 CCTGCCGATCCAATGGGTC 60.527 63.158 1.57 1.57 34.93 4.46
9373 12460 1.224315 CTGCCGATCCAATGGGTCA 59.776 57.895 13.63 0.00 34.93 4.02
9374 12461 0.394216 CTGCCGATCCAATGGGTCAA 60.394 55.000 13.63 0.00 34.93 3.18
9375 12462 0.679640 TGCCGATCCAATGGGTCAAC 60.680 55.000 13.63 4.11 34.93 3.18
9376 12463 1.384222 GCCGATCCAATGGGTCAACC 61.384 60.000 13.63 0.00 40.81 3.77
9384 12471 4.263572 TGGGTCAACCAGTGCCGG 62.264 66.667 0.00 0.00 46.80 6.13
9386 12473 4.947147 GGTCAACCAGTGCCGGCA 62.947 66.667 29.03 29.03 35.64 5.69
9387 12474 3.660111 GTCAACCAGTGCCGGCAC 61.660 66.667 45.27 45.27 46.50 5.01
9401 12488 3.364277 GGCACTACTGGACCGATTC 57.636 57.895 0.00 0.00 0.00 2.52
9402 12489 0.179081 GGCACTACTGGACCGATTCC 60.179 60.000 0.00 0.00 46.13 3.01
9403 12490 0.824759 GCACTACTGGACCGATTCCT 59.175 55.000 4.84 0.00 46.10 3.36
9404 12491 2.029623 GCACTACTGGACCGATTCCTA 58.970 52.381 4.84 0.00 46.10 2.94
9405 12492 2.628657 GCACTACTGGACCGATTCCTAT 59.371 50.000 4.84 0.00 46.10 2.57
9406 12493 3.825014 GCACTACTGGACCGATTCCTATA 59.175 47.826 4.84 0.00 46.10 1.31
9407 12494 4.321082 GCACTACTGGACCGATTCCTATAC 60.321 50.000 4.84 0.00 46.10 1.47
9408 12495 4.070716 ACTACTGGACCGATTCCTATACG 58.929 47.826 4.84 0.00 46.10 3.06
9409 12496 3.219176 ACTGGACCGATTCCTATACGA 57.781 47.619 4.84 0.00 46.10 3.43
9410 12497 3.147629 ACTGGACCGATTCCTATACGAG 58.852 50.000 4.84 0.00 46.10 4.18
9411 12498 2.488545 CTGGACCGATTCCTATACGAGG 59.511 54.545 4.84 0.00 46.10 4.63
9412 12499 1.201880 GGACCGATTCCTATACGAGGC 59.798 57.143 0.00 0.00 46.25 4.70
9413 12500 1.201880 GACCGATTCCTATACGAGGCC 59.798 57.143 0.00 0.00 46.25 5.19
9414 12501 0.170561 CCGATTCCTATACGAGGCCG 59.829 60.000 0.00 0.00 46.25 6.13
9415 12502 1.162698 CGATTCCTATACGAGGCCGA 58.837 55.000 0.00 0.00 46.25 5.54
9416 12503 1.135746 CGATTCCTATACGAGGCCGAC 60.136 57.143 0.00 0.00 46.25 4.79
9417 12504 1.201880 GATTCCTATACGAGGCCGACC 59.798 57.143 0.00 0.00 46.25 4.79
9418 12505 0.825010 TTCCTATACGAGGCCGACCC 60.825 60.000 0.00 0.00 46.25 4.46
9419 12506 1.529948 CCTATACGAGGCCGACCCA 60.530 63.158 0.00 0.00 38.96 4.51
9420 12507 1.111116 CCTATACGAGGCCGACCCAA 61.111 60.000 0.00 0.00 38.96 4.12
9421 12508 0.031721 CTATACGAGGCCGACCCAAC 59.968 60.000 0.00 0.00 39.50 3.77
9422 12509 0.683828 TATACGAGGCCGACCCAACA 60.684 55.000 0.00 0.00 39.50 3.33
9423 12510 1.956629 ATACGAGGCCGACCCAACAG 61.957 60.000 0.00 0.00 39.50 3.16
9424 12511 3.691342 CGAGGCCGACCCAACAGA 61.691 66.667 0.00 0.00 38.22 3.41
9425 12512 2.047179 GAGGCCGACCCAACAGAC 60.047 66.667 0.00 0.00 36.11 3.51
9426 12513 3.607370 GAGGCCGACCCAACAGACC 62.607 68.421 0.00 0.00 36.11 3.85
9427 12514 4.717313 GGCCGACCCAACAGACCC 62.717 72.222 0.00 0.00 0.00 4.46
9428 12515 3.948719 GCCGACCCAACAGACCCA 61.949 66.667 0.00 0.00 0.00 4.51
9429 12516 2.833227 CCGACCCAACAGACCCAA 59.167 61.111 0.00 0.00 0.00 4.12
9430 12517 1.378762 CCGACCCAACAGACCCAAT 59.621 57.895 0.00 0.00 0.00 3.16
9431 12518 0.960364 CCGACCCAACAGACCCAATG 60.960 60.000 0.00 0.00 0.00 2.82
9432 12519 0.960364 CGACCCAACAGACCCAATGG 60.960 60.000 0.00 0.00 37.80 3.16
9433 12520 1.228862 ACCCAACAGACCCAATGGC 60.229 57.895 0.00 0.00 33.59 4.40
9434 12521 1.984026 CCCAACAGACCCAATGGCC 60.984 63.158 0.00 0.00 33.59 5.36
9435 12522 1.077265 CCAACAGACCCAATGGCCT 59.923 57.895 3.32 0.00 33.59 5.19
9436 12523 0.542702 CCAACAGACCCAATGGCCTT 60.543 55.000 3.32 0.00 33.59 4.35
9437 12524 0.604578 CAACAGACCCAATGGCCTTG 59.395 55.000 3.32 6.12 33.59 3.61
9438 12525 0.482446 AACAGACCCAATGGCCTTGA 59.518 50.000 3.32 0.00 36.97 3.02
9439 12526 0.706433 ACAGACCCAATGGCCTTGAT 59.294 50.000 3.32 0.00 36.97 2.57
9440 12527 1.077663 ACAGACCCAATGGCCTTGATT 59.922 47.619 3.32 0.00 36.97 2.57
9441 12528 2.181975 CAGACCCAATGGCCTTGATTT 58.818 47.619 3.32 0.00 36.97 2.17
9442 12529 2.093869 CAGACCCAATGGCCTTGATTTG 60.094 50.000 3.32 0.18 36.97 2.32
9443 12530 1.901833 GACCCAATGGCCTTGATTTGT 59.098 47.619 3.32 2.37 36.97 2.83
9444 12531 2.302733 GACCCAATGGCCTTGATTTGTT 59.697 45.455 3.32 0.00 36.97 2.83
9445 12532 2.710471 ACCCAATGGCCTTGATTTGTTT 59.290 40.909 3.32 0.00 36.97 2.83
9446 12533 3.075884 CCCAATGGCCTTGATTTGTTTG 58.924 45.455 3.32 0.00 36.97 2.93
9447 12534 3.075884 CCAATGGCCTTGATTTGTTTGG 58.924 45.455 3.32 0.00 36.97 3.28
9448 12535 3.496515 CCAATGGCCTTGATTTGTTTGGT 60.497 43.478 3.32 0.00 36.97 3.67
9449 12536 3.683365 ATGGCCTTGATTTGTTTGGTC 57.317 42.857 3.32 0.00 0.00 4.02
9450 12537 1.339610 TGGCCTTGATTTGTTTGGTCG 59.660 47.619 3.32 0.00 0.00 4.79
9451 12538 1.336795 GGCCTTGATTTGTTTGGTCGG 60.337 52.381 0.00 0.00 0.00 4.79
9452 12539 1.336795 GCCTTGATTTGTTTGGTCGGG 60.337 52.381 0.00 0.00 0.00 5.14
9453 12540 1.336795 CCTTGATTTGTTTGGTCGGGC 60.337 52.381 0.00 0.00 0.00 6.13
9454 12541 0.676736 TTGATTTGTTTGGTCGGGCC 59.323 50.000 0.00 0.00 37.90 5.80
9470 12557 4.733542 CCAATGGCCCGACGGGTT 62.734 66.667 32.76 17.61 46.51 4.11
9471 12558 3.439540 CAATGGCCCGACGGGTTG 61.440 66.667 32.76 24.46 46.51 3.77
9472 12559 3.642503 AATGGCCCGACGGGTTGA 61.643 61.111 32.76 17.77 46.51 3.18
9473 12560 3.912745 AATGGCCCGACGGGTTGAC 62.913 63.158 32.76 20.56 46.51 3.18
9483 12570 3.944945 GGGTTGACCCGACCCGTT 61.945 66.667 2.92 0.00 46.79 4.44
9484 12571 2.357881 GGTTGACCCGACCCGTTC 60.358 66.667 0.00 0.00 31.94 3.95
9485 12572 2.357881 GTTGACCCGACCCGTTCC 60.358 66.667 0.00 0.00 0.00 3.62
9486 12573 3.628982 TTGACCCGACCCGTTCCC 61.629 66.667 0.00 0.00 0.00 3.97
9487 12574 4.938074 TGACCCGACCCGTTCCCA 62.938 66.667 0.00 0.00 0.00 4.37
9488 12575 3.396570 GACCCGACCCGTTCCCAT 61.397 66.667 0.00 0.00 0.00 4.00
9489 12576 3.381333 GACCCGACCCGTTCCCATC 62.381 68.421 0.00 0.00 0.00 3.51
9490 12577 3.081409 CCCGACCCGTTCCCATCT 61.081 66.667 0.00 0.00 0.00 2.90
9491 12578 2.666098 CCCGACCCGTTCCCATCTT 61.666 63.158 0.00 0.00 0.00 2.40
9492 12579 1.449601 CCGACCCGTTCCCATCTTG 60.450 63.158 0.00 0.00 0.00 3.02
9493 12580 1.594833 CGACCCGTTCCCATCTTGA 59.405 57.895 0.00 0.00 0.00 3.02
9498 12585 1.156736 CCGTTCCCATCTTGACACAC 58.843 55.000 0.00 0.00 0.00 3.82
9510 12597 5.697473 TCTTGACACACTGACAAAACAAA 57.303 34.783 0.00 0.00 32.29 2.83
9554 12643 4.672587 AGATGTTATGCTGATGTACGGT 57.327 40.909 0.00 0.00 0.00 4.83
9558 12647 3.702548 TGTTATGCTGATGTACGGTAGGT 59.297 43.478 0.00 0.00 0.00 3.08
9574 12663 1.973281 GGTGACACCCATGCACTGG 60.973 63.158 14.16 7.88 45.51 4.00
9579 12668 2.170397 TGACACCCATGCACTGGTATAG 59.830 50.000 8.57 0.55 44.30 1.31
9586 12675 3.389329 CCATGCACTGGTATAGAAGGAGT 59.611 47.826 0.00 0.00 40.49 3.85
9591 12680 4.888239 GCACTGGTATAGAAGGAGTAGTCA 59.112 45.833 0.00 0.00 0.00 3.41
9592 12681 5.536916 GCACTGGTATAGAAGGAGTAGTCAT 59.463 44.000 0.00 0.00 0.00 3.06
9593 12682 6.515862 GCACTGGTATAGAAGGAGTAGTCATG 60.516 46.154 0.00 0.00 0.00 3.07
9594 12683 6.773200 CACTGGTATAGAAGGAGTAGTCATGA 59.227 42.308 0.00 0.00 0.00 3.07
9595 12684 7.285629 CACTGGTATAGAAGGAGTAGTCATGAA 59.714 40.741 0.00 0.00 0.00 2.57
9596 12685 7.285858 ACTGGTATAGAAGGAGTAGTCATGAAC 59.714 40.741 0.00 0.00 0.00 3.18
9597 12686 6.262496 TGGTATAGAAGGAGTAGTCATGAACG 59.738 42.308 0.00 0.00 0.00 3.95
9598 12687 6.262720 GGTATAGAAGGAGTAGTCATGAACGT 59.737 42.308 0.00 0.00 0.00 3.99
9599 12688 4.705337 AGAAGGAGTAGTCATGAACGTC 57.295 45.455 0.00 0.00 0.00 4.34
9600 12689 4.079970 AGAAGGAGTAGTCATGAACGTCA 58.920 43.478 0.00 0.00 0.00 4.35
9601 12690 3.851976 AGGAGTAGTCATGAACGTCAC 57.148 47.619 0.00 0.00 0.00 3.67
9602 12691 3.422796 AGGAGTAGTCATGAACGTCACT 58.577 45.455 0.00 0.00 0.00 3.41
9640 12729 2.039084 AGGGAAAGAGCCTGTGTTGTAG 59.961 50.000 0.00 0.00 0.00 2.74
9641 12730 1.807142 GGAAAGAGCCTGTGTTGTAGC 59.193 52.381 0.00 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 128 4.202398 ACACATGATTTCCTAGCATCCGAT 60.202 41.667 0.00 0.00 0.00 4.18
133 134 6.594744 ACATATCACACATGATTTCCTAGCA 58.405 36.000 0.00 0.00 43.40 3.49
140 141 8.852135 TGATTGCATACATATCACACATGATTT 58.148 29.630 0.00 0.00 43.40 2.17
143 144 6.428771 CCTGATTGCATACATATCACACATGA 59.571 38.462 0.00 0.00 39.83 3.07
145 146 6.536447 TCCTGATTGCATACATATCACACAT 58.464 36.000 0.00 0.00 0.00 3.21
146 147 5.927819 TCCTGATTGCATACATATCACACA 58.072 37.500 0.00 0.00 0.00 3.72
182 183 3.551846 ACTGGTGATTTTTCGTGAAGGT 58.448 40.909 0.00 0.00 0.00 3.50
191 192 6.014584 GGAACATCCCTTAACTGGTGATTTTT 60.015 38.462 0.00 0.00 0.00 1.94
235 236 2.163818 TCAGAGGCGTTTTGGTGTAG 57.836 50.000 0.00 0.00 0.00 2.74
239 240 2.086869 CATCATCAGAGGCGTTTTGGT 58.913 47.619 0.00 0.00 0.00 3.67
240 241 2.096496 GTCATCATCAGAGGCGTTTTGG 59.904 50.000 0.00 0.00 0.00 3.28
242 243 3.057969 TGTCATCATCAGAGGCGTTTT 57.942 42.857 0.00 0.00 0.00 2.43
254 255 4.492494 TCACTATGCCACTTGTCATCAT 57.508 40.909 0.00 0.00 0.00 2.45
292 293 1.266989 CGACCAAAACTTCCTGAAGGC 59.733 52.381 11.34 0.00 42.53 4.35
319 322 2.546645 ATCCGTTCCGCGCGTAGAAA 62.547 55.000 29.95 14.16 39.71 2.52
323 326 2.125991 AAATCCGTTCCGCGCGTA 60.126 55.556 29.95 11.05 39.71 4.42
422 425 2.031258 TTGACGTGAGAAAGGCAACA 57.969 45.000 0.00 0.00 41.41 3.33
440 443 9.541143 AACACGAAATCTAATTTTGATGGTTTT 57.459 25.926 6.65 0.00 37.15 2.43
750 765 5.356190 AGACAATATGAAGAAGTGTGCATGG 59.644 40.000 0.00 0.00 0.00 3.66
763 781 8.364142 CAAAAGTGGGGTAAAAGACAATATGAA 58.636 33.333 0.00 0.00 0.00 2.57
770 788 6.361768 AAAACAAAAGTGGGGTAAAAGACA 57.638 33.333 0.00 0.00 0.00 3.41
776 794 5.740290 TGACAAAAACAAAAGTGGGGTAA 57.260 34.783 0.00 0.00 0.00 2.85
783 1229 5.546526 TCAAGCCTTGACAAAAACAAAAGT 58.453 33.333 2.24 0.00 34.08 2.66
805 1252 5.273944 AGAAGAGTTTCAAATGTTGCGTTC 58.726 37.500 0.00 0.00 35.70 3.95
846 1293 3.821748 AGCCCGAGAAGAGTTTCTTTTT 58.178 40.909 0.00 0.00 43.63 1.94
851 1298 1.469423 CCGTAGCCCGAGAAGAGTTTC 60.469 57.143 0.00 0.00 39.56 2.78
871 1319 1.596260 GCTATTTTAGGCCCGTTCGAC 59.404 52.381 0.00 0.00 0.00 4.20
898 1346 1.002087 GGCGTTCTCTTCCCTTCTTCA 59.998 52.381 0.00 0.00 0.00 3.02
920 1369 6.425210 TCTCTCTCTCCTCTTCAGAGATAG 57.575 45.833 5.33 3.40 44.36 2.08
921 1370 6.823286 TTCTCTCTCTCCTCTTCAGAGATA 57.177 41.667 5.33 0.00 44.36 1.98
922 1371 5.715439 TTCTCTCTCTCCTCTTCAGAGAT 57.285 43.478 5.33 0.00 44.36 2.75
923 1372 5.500234 CTTTCTCTCTCTCCTCTTCAGAGA 58.500 45.833 5.33 0.00 44.74 3.10
924 1373 4.096984 GCTTTCTCTCTCTCCTCTTCAGAG 59.903 50.000 0.00 0.00 41.71 3.35
925 1374 4.016444 GCTTTCTCTCTCTCCTCTTCAGA 58.984 47.826 0.00 0.00 0.00 3.27
926 1375 3.131046 GGCTTTCTCTCTCTCCTCTTCAG 59.869 52.174 0.00 0.00 0.00 3.02
927 1376 3.096092 GGCTTTCTCTCTCTCCTCTTCA 58.904 50.000 0.00 0.00 0.00 3.02
973 1451 1.674057 CTCCTGCAGTTTCTCCGGT 59.326 57.895 13.81 0.00 0.00 5.28
1092 1576 2.365901 ATTACGGGGCGGGAAGGA 60.366 61.111 0.00 0.00 0.00 3.36
1266 1751 2.186826 GCCATCGAATCCCAACCGG 61.187 63.158 0.00 0.00 0.00 5.28
1318 1807 6.540551 TGCATCAACGCATAGGTTTTCTATAA 59.459 34.615 0.00 0.00 36.59 0.98
1335 1824 2.478134 GGACGAGATAGCATGCATCAAC 59.522 50.000 21.98 15.55 0.00 3.18
1430 1920 6.349777 CCATCTCGGTTTAGCCAACAAAAATA 60.350 38.462 0.00 0.00 37.07 1.40
1500 1990 0.545309 AGAGGGTTAGTGCAGCAGGA 60.545 55.000 0.00 0.00 0.00 3.86
1502 1992 2.079925 GAAAGAGGGTTAGTGCAGCAG 58.920 52.381 0.00 0.00 0.00 4.24
1503 1993 1.699634 AGAAAGAGGGTTAGTGCAGCA 59.300 47.619 0.00 0.00 0.00 4.41
1504 1994 2.079925 CAGAAAGAGGGTTAGTGCAGC 58.920 52.381 0.00 0.00 0.00 5.25
1506 1996 1.699634 AGCAGAAAGAGGGTTAGTGCA 59.300 47.619 0.00 0.00 31.75 4.57
1553 2043 1.028905 GCTTTGTACTGTGGCCACAA 58.971 50.000 36.71 22.55 41.33 3.33
1559 2049 2.607187 CTCGTAGGCTTTGTACTGTGG 58.393 52.381 0.00 0.00 0.00 4.17
1802 2292 4.102524 AGTGAGACAAATACACCCAGTGAA 59.897 41.667 0.96 0.00 36.96 3.18
1803 2293 3.646162 AGTGAGACAAATACACCCAGTGA 59.354 43.478 0.96 0.00 36.96 3.41
1804 2294 4.008074 AGTGAGACAAATACACCCAGTG 57.992 45.455 0.00 0.00 39.75 3.66
1805 2295 5.483937 TCATAGTGAGACAAATACACCCAGT 59.516 40.000 0.00 0.00 35.47 4.00
1806 2296 5.977635 TCATAGTGAGACAAATACACCCAG 58.022 41.667 0.00 0.00 35.47 4.45
1978 2614 8.749499 GCATGAACATTAGAAACAATATGCTTC 58.251 33.333 0.00 0.00 35.57 3.86
2211 3115 3.211045 AGAAACTTCGCAGCCTGTTAAA 58.789 40.909 0.00 0.00 0.00 1.52
2213 3117 2.543777 AGAAACTTCGCAGCCTGTTA 57.456 45.000 0.00 0.00 0.00 2.41
2224 3128 7.222805 GGAACAAGACAAATGGAAAGAAACTTC 59.777 37.037 0.00 0.00 0.00 3.01
2400 3304 9.139734 ACTAATCATTAACCCAGACTACGAATA 57.860 33.333 0.00 0.00 0.00 1.75
2401 3305 8.019656 ACTAATCATTAACCCAGACTACGAAT 57.980 34.615 0.00 0.00 0.00 3.34
2402 3306 7.341256 AGACTAATCATTAACCCAGACTACGAA 59.659 37.037 0.00 0.00 0.00 3.85
2403 3307 6.832384 AGACTAATCATTAACCCAGACTACGA 59.168 38.462 0.00 0.00 0.00 3.43
2404 3308 7.040473 AGACTAATCATTAACCCAGACTACG 57.960 40.000 0.00 0.00 0.00 3.51
2408 3312 9.832445 TCATTAAGACTAATCATTAACCCAGAC 57.168 33.333 0.00 0.00 0.00 3.51
2411 3321 9.967451 TGTTCATTAAGACTAATCATTAACCCA 57.033 29.630 0.00 0.00 0.00 4.51
2564 3477 4.742438 TTTTTCTACGCAGGTGCTAAAG 57.258 40.909 0.00 0.00 39.32 1.85
2632 3545 2.147958 AGAACTTGAACGCGGCATAAA 58.852 42.857 12.47 0.00 0.00 1.40
2634 3547 1.803334 AAGAACTTGAACGCGGCATA 58.197 45.000 12.47 0.00 0.00 3.14
2645 3561 8.567285 AATCACTGGTAGGATTTAAGAACTTG 57.433 34.615 0.00 0.00 29.77 3.16
2674 3590 2.102578 GCATAACCTCTGGCACCAAAT 58.897 47.619 0.00 0.00 0.00 2.32
2774 3724 0.729690 GGCTTGATTCGAGCTTGGAC 59.270 55.000 22.25 4.89 40.49 4.02
2783 3733 0.962356 ACCTGGCTTGGCTTGATTCG 60.962 55.000 0.00 0.00 0.00 3.34
2894 3844 6.662755 TCTTATGTATCTGATGGCCAAACTT 58.337 36.000 10.96 0.00 0.00 2.66
2967 3918 8.853077 ATCTTCAAACACATGATGAGTCTTAA 57.147 30.769 0.00 0.00 37.05 1.85
3005 3956 4.156008 CCTACACTAAGTTCAATGGCAACC 59.844 45.833 0.00 0.00 0.00 3.77
3772 4724 0.744281 GAGAAGAGAGGGAAGCCGAG 59.256 60.000 0.00 0.00 0.00 4.63
3817 4771 2.042230 GGCGGAAGGGTAGGGAGA 60.042 66.667 0.00 0.00 0.00 3.71
3873 4827 2.910360 CGGCTGTGGGATCCATCA 59.090 61.111 15.23 10.77 35.28 3.07
4175 5166 3.425713 CGACGACGAGAACCCGGA 61.426 66.667 0.73 0.00 42.66 5.14
4518 5513 2.044555 TCGCCGAGGTCAATCGAGT 61.045 57.895 0.00 0.00 45.56 4.18
4604 5611 2.654877 GGTGCCTTTCCTCGTCGA 59.345 61.111 0.00 0.00 0.00 4.20
4738 7059 2.850851 TAGATCGGCCCCTGGGGTTT 62.851 60.000 31.95 14.83 46.51 3.27
4839 7160 5.045869 CCCCCTCTGTAAACTTTAGTGATCA 60.046 44.000 0.00 0.00 0.00 2.92
5069 7890 9.231297 CCGATACTGGTTGGATAAATATCAAAT 57.769 33.333 3.07 0.00 34.40 2.32
5198 8024 1.488705 AACTGATGAAGTGGGCCCGA 61.489 55.000 19.37 3.06 39.81 5.14
5200 8026 0.038166 TGAACTGATGAAGTGGGCCC 59.962 55.000 17.59 17.59 39.81 5.80
5206 8032 5.684704 TCCAAAAGTCTGAACTGATGAAGT 58.315 37.500 0.00 0.00 42.60 3.01
5207 8033 5.334724 GCTCCAAAAGTCTGAACTGATGAAG 60.335 44.000 0.00 0.00 35.36 3.02
5211 8037 4.090761 TGCTCCAAAAGTCTGAACTGAT 57.909 40.909 0.00 0.00 35.36 2.90
5365 8196 3.627395 ATATTTCAACACGCCCTCTCA 57.373 42.857 0.00 0.00 0.00 3.27
5373 8204 3.296628 GCGGGCAATATATTTCAACACG 58.703 45.455 0.00 0.53 0.00 4.49
5425 8256 4.909894 GCAAGTTTATGCACCTAACTAGC 58.090 43.478 9.54 0.00 45.70 3.42
5490 8321 2.731217 CAGGCCGCAATTATTTACTGC 58.269 47.619 0.00 0.00 0.00 4.40
5491 8322 2.543653 GGCAGGCCGCAATTATTTACTG 60.544 50.000 18.87 0.00 45.17 2.74
5492 8323 1.681264 GGCAGGCCGCAATTATTTACT 59.319 47.619 18.87 0.00 45.17 2.24
5493 8324 1.269569 GGGCAGGCCGCAATTATTTAC 60.270 52.381 18.87 1.28 45.17 2.01
5541 8372 2.544685 CTGACGTCTATGCTCCTTTGG 58.455 52.381 17.92 0.00 0.00 3.28
5559 8390 1.584724 ATACTCCAACACTCCCCCTG 58.415 55.000 0.00 0.00 0.00 4.45
5563 8394 4.704965 GGACATTATACTCCAACACTCCC 58.295 47.826 0.00 0.00 0.00 4.30
5604 8435 0.671781 AGAGCACAGAACGCATGTCC 60.672 55.000 0.00 0.00 0.00 4.02
5605 8436 1.656095 GTAGAGCACAGAACGCATGTC 59.344 52.381 0.00 0.00 0.00 3.06
5606 8437 1.273606 AGTAGAGCACAGAACGCATGT 59.726 47.619 0.00 0.00 0.00 3.21
5607 8438 2.001812 AGTAGAGCACAGAACGCATG 57.998 50.000 0.00 0.00 0.00 4.06
5608 8439 2.738846 CAAAGTAGAGCACAGAACGCAT 59.261 45.455 0.00 0.00 0.00 4.73
5609 8440 2.135139 CAAAGTAGAGCACAGAACGCA 58.865 47.619 0.00 0.00 0.00 5.24
5610 8441 2.155924 GTCAAAGTAGAGCACAGAACGC 59.844 50.000 0.00 0.00 0.00 4.84
5611 8442 2.731976 GGTCAAAGTAGAGCACAGAACG 59.268 50.000 0.00 0.00 36.11 3.95
5615 8446 3.667497 TCAGGTCAAAGTAGAGCACAG 57.333 47.619 0.00 0.00 38.44 3.66
5677 8508 4.098416 GGAATTCAATACAAGCTTGTCGC 58.902 43.478 34.29 15.14 42.35 5.19
5767 8640 3.579302 CCCTGGGGAGGCACAACA 61.579 66.667 4.27 0.00 37.50 3.33
6069 8949 1.216977 CGCTGATTCACCGGTGGTA 59.783 57.895 33.40 21.99 32.11 3.25
6106 8986 3.626596 AGGAGAGGGAAGGGGGCA 61.627 66.667 0.00 0.00 0.00 5.36
6302 9285 0.249398 GCTCGACCTTGCCCTTCTTA 59.751 55.000 0.00 0.00 0.00 2.10
6532 9515 2.362632 ACGCTTCCCTCGCCTAGT 60.363 61.111 0.00 0.00 0.00 2.57
6534 9517 3.515286 CGACGCTTCCCTCGCCTA 61.515 66.667 0.00 0.00 0.00 3.93
6575 9558 2.028484 ACACCTACCGCACACACG 59.972 61.111 0.00 0.00 0.00 4.49
7201 10207 4.248058 GACCTTTTCCCAAAATGCTGATG 58.752 43.478 0.00 0.00 0.00 3.07
7220 10226 5.239525 GCAACATGACTAAAGGGATATGACC 59.760 44.000 0.00 0.00 0.00 4.02
7222 10228 5.376625 GGCAACATGACTAAAGGGATATGA 58.623 41.667 0.00 0.00 0.00 2.15
7319 10325 4.568152 TCTGCTTTGGCTTTTCTTGTAC 57.432 40.909 0.00 0.00 39.59 2.90
7366 10372 3.525800 ACCTCAGCCCACTTGTTAATT 57.474 42.857 0.00 0.00 0.00 1.40
7420 10426 9.542462 TTTATATGTAACTGCACAGTCCTAATC 57.458 33.333 3.32 0.00 41.58 1.75
7428 10434 5.880332 ACCACCTTTATATGTAACTGCACAG 59.120 40.000 0.00 0.00 0.00 3.66
7812 10819 8.853077 TGAAACTCAGTCATGACTATGAAAAT 57.147 30.769 27.44 11.08 44.49 1.82
7855 10862 8.492673 TCATCTTTATGACCATGTTAGACAAC 57.507 34.615 0.00 0.00 37.20 3.32
7911 10918 6.127619 TGAGGACATCATCATATACATCCGTC 60.128 42.308 0.00 0.00 31.11 4.79
8249 11256 4.338879 AGAATTCAATACCTGCAGCTGTT 58.661 39.130 16.64 0.00 0.00 3.16
8301 11308 7.491682 ACACATACATTGCTTCAAAGTTTTCT 58.508 30.769 0.00 0.00 0.00 2.52
8582 11590 2.630889 TCTTCCAGGACATGTCTCCT 57.369 50.000 24.50 12.85 41.84 3.69
8699 11707 2.158856 TCCATAGAAGATGCTGCCTGTG 60.159 50.000 0.00 0.00 0.00 3.66
8703 11727 6.317391 GGTTATAATCCATAGAAGATGCTGCC 59.683 42.308 0.00 0.00 0.00 4.85
8794 11818 9.926751 CTCAACACAAGCAATAGTAAATGATAG 57.073 33.333 0.00 0.00 0.00 2.08
8795 11819 8.397906 GCTCAACACAAGCAATAGTAAATGATA 58.602 33.333 0.00 0.00 39.61 2.15
8796 11820 7.094248 TGCTCAACACAAGCAATAGTAAATGAT 60.094 33.333 0.00 0.00 46.29 2.45
8797 11821 6.206438 TGCTCAACACAAGCAATAGTAAATGA 59.794 34.615 0.00 0.00 46.29 2.57
8878 11950 1.813513 ACAGGAGGCAAAATGACGAG 58.186 50.000 0.00 0.00 0.00 4.18
8903 11975 7.206687 GGACTAGAATGACATTCACTCTTAGG 58.793 42.308 26.05 11.12 41.71 2.69
8904 11976 6.915300 CGGACTAGAATGACATTCACTCTTAG 59.085 42.308 26.05 19.88 41.71 2.18
8905 11977 6.183360 CCGGACTAGAATGACATTCACTCTTA 60.183 42.308 26.05 11.17 41.71 2.10
8906 11978 5.394663 CCGGACTAGAATGACATTCACTCTT 60.395 44.000 26.05 10.66 41.71 2.85
8907 11979 4.098654 CCGGACTAGAATGACATTCACTCT 59.901 45.833 26.05 10.99 41.71 3.24
8908 11980 4.098044 TCCGGACTAGAATGACATTCACTC 59.902 45.833 26.05 17.01 41.71 3.51
8909 11981 4.023980 TCCGGACTAGAATGACATTCACT 58.976 43.478 26.05 11.94 41.71 3.41
8910 11982 4.386867 TCCGGACTAGAATGACATTCAC 57.613 45.455 26.05 15.16 41.71 3.18
9045 12132 4.878397 ACTCATATTGCTGGCTTCTTACAC 59.122 41.667 0.00 0.00 0.00 2.90
9082 12169 7.250032 TCATGCCTTCTTATGCATATACTCT 57.750 36.000 7.36 0.00 45.98 3.24
9104 12191 3.462483 TTTGGCTTAGACTCGTGTTCA 57.538 42.857 0.00 0.00 0.00 3.18
9110 12197 5.741388 AGCATATTTTTGGCTTAGACTCG 57.259 39.130 0.00 0.00 33.21 4.18
9115 12202 6.907212 CGACTACAAGCATATTTTTGGCTTAG 59.093 38.462 0.00 0.00 45.42 2.18
9157 12244 8.646004 CCTTCACTCTTAGATCCTTCATGAATA 58.354 37.037 8.96 0.59 0.00 1.75
9158 12245 7.346698 TCCTTCACTCTTAGATCCTTCATGAAT 59.653 37.037 8.96 0.00 0.00 2.57
9159 12246 6.669591 TCCTTCACTCTTAGATCCTTCATGAA 59.330 38.462 8.12 8.12 0.00 2.57
9160 12247 6.197903 TCCTTCACTCTTAGATCCTTCATGA 58.802 40.000 0.00 0.00 0.00 3.07
9161 12248 6.477053 TCCTTCACTCTTAGATCCTTCATG 57.523 41.667 0.00 0.00 0.00 3.07
9162 12249 7.015487 CAGATCCTTCACTCTTAGATCCTTCAT 59.985 40.741 0.00 0.00 35.08 2.57
9163 12250 6.323482 CAGATCCTTCACTCTTAGATCCTTCA 59.677 42.308 0.00 0.00 35.08 3.02
9164 12251 6.549364 TCAGATCCTTCACTCTTAGATCCTTC 59.451 42.308 0.00 0.00 35.08 3.46
9165 12252 6.439487 TCAGATCCTTCACTCTTAGATCCTT 58.561 40.000 0.00 0.00 35.08 3.36
9166 12253 6.024563 TCAGATCCTTCACTCTTAGATCCT 57.975 41.667 0.00 0.00 35.08 3.24
9167 12254 6.723298 TTCAGATCCTTCACTCTTAGATCC 57.277 41.667 0.00 0.00 35.08 3.36
9168 12255 7.725251 ACATTCAGATCCTTCACTCTTAGATC 58.275 38.462 0.00 0.00 34.79 2.75
9169 12256 7.673641 ACATTCAGATCCTTCACTCTTAGAT 57.326 36.000 0.00 0.00 0.00 1.98
9170 12257 8.595362 TTACATTCAGATCCTTCACTCTTAGA 57.405 34.615 0.00 0.00 0.00 2.10
9171 12258 9.829507 AATTACATTCAGATCCTTCACTCTTAG 57.170 33.333 0.00 0.00 0.00 2.18
9173 12260 9.525826 AAAATTACATTCAGATCCTTCACTCTT 57.474 29.630 0.00 0.00 0.00 2.85
9174 12261 9.525826 AAAAATTACATTCAGATCCTTCACTCT 57.474 29.630 0.00 0.00 0.00 3.24
9197 12284 9.982291 GCAGTACAACGAATATCAGAAATAAAA 57.018 29.630 0.00 0.00 0.00 1.52
9198 12285 8.609176 GGCAGTACAACGAATATCAGAAATAAA 58.391 33.333 0.00 0.00 0.00 1.40
9199 12286 7.766738 TGGCAGTACAACGAATATCAGAAATAA 59.233 33.333 0.00 0.00 0.00 1.40
9200 12287 7.269316 TGGCAGTACAACGAATATCAGAAATA 58.731 34.615 0.00 0.00 0.00 1.40
9201 12288 6.112734 TGGCAGTACAACGAATATCAGAAAT 58.887 36.000 0.00 0.00 0.00 2.17
9202 12289 5.483811 TGGCAGTACAACGAATATCAGAAA 58.516 37.500 0.00 0.00 0.00 2.52
9203 12290 5.079689 TGGCAGTACAACGAATATCAGAA 57.920 39.130 0.00 0.00 0.00 3.02
9204 12291 4.729227 TGGCAGTACAACGAATATCAGA 57.271 40.909 0.00 0.00 0.00 3.27
9205 12292 5.049828 TCATGGCAGTACAACGAATATCAG 58.950 41.667 0.00 0.00 0.00 2.90
9206 12293 5.017294 TCATGGCAGTACAACGAATATCA 57.983 39.130 0.00 0.00 0.00 2.15
9207 12294 6.202762 TCAATCATGGCAGTACAACGAATATC 59.797 38.462 0.00 0.00 0.00 1.63
9208 12295 6.054941 TCAATCATGGCAGTACAACGAATAT 58.945 36.000 0.00 0.00 0.00 1.28
9209 12296 5.423886 TCAATCATGGCAGTACAACGAATA 58.576 37.500 0.00 0.00 0.00 1.75
9210 12297 4.260985 TCAATCATGGCAGTACAACGAAT 58.739 39.130 0.00 0.00 0.00 3.34
9211 12298 3.669536 TCAATCATGGCAGTACAACGAA 58.330 40.909 0.00 0.00 0.00 3.85
9212 12299 3.326836 TCAATCATGGCAGTACAACGA 57.673 42.857 0.00 0.00 0.00 3.85
9213 12300 3.684305 TCTTCAATCATGGCAGTACAACG 59.316 43.478 0.00 0.00 0.00 4.10
9214 12301 5.355071 TCATCTTCAATCATGGCAGTACAAC 59.645 40.000 0.00 0.00 0.00 3.32
9215 12302 5.499313 TCATCTTCAATCATGGCAGTACAA 58.501 37.500 0.00 0.00 0.00 2.41
9216 12303 5.101648 TCATCTTCAATCATGGCAGTACA 57.898 39.130 0.00 0.00 0.00 2.90
9217 12304 6.630444 ATTCATCTTCAATCATGGCAGTAC 57.370 37.500 0.00 0.00 0.00 2.73
9218 12305 7.738847 TCTATTCATCTTCAATCATGGCAGTA 58.261 34.615 0.00 0.00 0.00 2.74
9219 12306 6.598503 TCTATTCATCTTCAATCATGGCAGT 58.401 36.000 0.00 0.00 0.00 4.40
9220 12307 7.689446 ATCTATTCATCTTCAATCATGGCAG 57.311 36.000 0.00 0.00 0.00 4.85
9221 12308 9.577222 TTAATCTATTCATCTTCAATCATGGCA 57.423 29.630 0.00 0.00 0.00 4.92
9233 12320 8.893727 CCGGAAACACTTTTAATCTATTCATCT 58.106 33.333 0.00 0.00 0.00 2.90
9234 12321 8.889717 TCCGGAAACACTTTTAATCTATTCATC 58.110 33.333 0.00 0.00 0.00 2.92
9235 12322 8.801882 TCCGGAAACACTTTTAATCTATTCAT 57.198 30.769 0.00 0.00 0.00 2.57
9236 12323 8.624367 TTCCGGAAACACTTTTAATCTATTCA 57.376 30.769 16.28 0.00 0.00 2.57
9237 12324 9.902196 TTTTCCGGAAACACTTTTAATCTATTC 57.098 29.630 28.97 0.00 0.00 1.75
9266 12353 6.507023 CAAATAGACTCACAACTTTGCCTTT 58.493 36.000 0.00 0.00 0.00 3.11
9270 12357 4.676924 GTGCAAATAGACTCACAACTTTGC 59.323 41.667 10.06 10.06 45.24 3.68
9288 12375 0.387202 CCCCGACAATTTGTGTGCAA 59.613 50.000 6.80 0.00 41.96 4.08
9290 12377 1.372872 GCCCCGACAATTTGTGTGC 60.373 57.895 6.80 0.54 41.96 4.57
9291 12378 1.081509 CGCCCCGACAATTTGTGTG 60.082 57.895 6.80 0.00 41.96 3.82
9292 12379 2.265182 CCGCCCCGACAATTTGTGT 61.265 57.895 6.80 0.00 45.74 3.72
9294 12381 0.675522 CTACCGCCCCGACAATTTGT 60.676 55.000 0.63 0.63 0.00 2.83
9295 12382 0.391927 TCTACCGCCCCGACAATTTG 60.392 55.000 0.00 0.00 0.00 2.32
9296 12383 0.392060 GTCTACCGCCCCGACAATTT 60.392 55.000 0.00 0.00 0.00 1.82
9297 12384 1.219935 GTCTACCGCCCCGACAATT 59.780 57.895 0.00 0.00 0.00 2.32
9298 12385 1.335132 ATGTCTACCGCCCCGACAAT 61.335 55.000 0.00 0.00 40.61 2.71
9299 12386 1.985662 ATGTCTACCGCCCCGACAA 60.986 57.895 0.00 0.00 40.61 3.18
9300 12387 2.363276 ATGTCTACCGCCCCGACA 60.363 61.111 0.00 0.00 41.36 4.35
9301 12388 2.106332 CATGTCTACCGCCCCGAC 59.894 66.667 0.00 0.00 0.00 4.79
9302 12389 3.151710 CCATGTCTACCGCCCCGA 61.152 66.667 0.00 0.00 0.00 5.14
9303 12390 3.151710 TCCATGTCTACCGCCCCG 61.152 66.667 0.00 0.00 0.00 5.73
9304 12391 2.064581 AGTCCATGTCTACCGCCCC 61.065 63.158 0.00 0.00 0.00 5.80
9305 12392 1.144057 CAGTCCATGTCTACCGCCC 59.856 63.158 0.00 0.00 0.00 6.13
9306 12393 1.144057 CCAGTCCATGTCTACCGCC 59.856 63.158 0.00 0.00 0.00 6.13
9307 12394 1.144057 CCCAGTCCATGTCTACCGC 59.856 63.158 0.00 0.00 0.00 5.68
9308 12395 0.976073 ACCCCAGTCCATGTCTACCG 60.976 60.000 0.00 0.00 0.00 4.02
9309 12396 0.831307 GACCCCAGTCCATGTCTACC 59.169 60.000 0.00 0.00 37.00 3.18
9310 12397 0.460311 CGACCCCAGTCCATGTCTAC 59.540 60.000 0.00 0.00 40.12 2.59
9311 12398 0.686441 CCGACCCCAGTCCATGTCTA 60.686 60.000 0.00 0.00 40.12 2.59
9312 12399 1.990060 CCGACCCCAGTCCATGTCT 60.990 63.158 0.00 0.00 40.12 3.41
9313 12400 2.584608 CCGACCCCAGTCCATGTC 59.415 66.667 0.00 0.00 40.12 3.06
9314 12401 3.009115 CCCGACCCCAGTCCATGT 61.009 66.667 0.00 0.00 40.12 3.21
9315 12402 3.797353 CCCCGACCCCAGTCCATG 61.797 72.222 0.00 0.00 40.12 3.66
9337 12424 2.202892 GGTCGACCCGAGGCAATC 60.203 66.667 24.75 0.00 36.23 2.67
9347 12434 4.222847 GGATCGGCAGGGTCGACC 62.223 72.222 27.04 27.04 44.04 4.79
9348 12435 2.311688 ATTGGATCGGCAGGGTCGAC 62.312 60.000 7.13 7.13 44.04 4.20
9349 12436 2.063979 ATTGGATCGGCAGGGTCGA 61.064 57.895 0.00 0.00 45.68 4.20
9350 12437 1.889105 CATTGGATCGGCAGGGTCG 60.889 63.158 0.00 0.00 0.00 4.79
9351 12438 1.526917 CCATTGGATCGGCAGGGTC 60.527 63.158 0.00 0.00 0.00 4.46
9352 12439 2.597340 CCATTGGATCGGCAGGGT 59.403 61.111 0.00 0.00 0.00 4.34
9353 12440 2.203394 CCCATTGGATCGGCAGGG 60.203 66.667 3.62 0.00 0.00 4.45
9354 12441 1.526917 GACCCATTGGATCGGCAGG 60.527 63.158 3.62 0.00 34.81 4.85
9355 12442 0.394216 TTGACCCATTGGATCGGCAG 60.394 55.000 3.62 0.00 34.81 4.85
9356 12443 0.679640 GTTGACCCATTGGATCGGCA 60.680 55.000 3.62 0.00 34.81 5.69
9357 12444 1.384222 GGTTGACCCATTGGATCGGC 61.384 60.000 3.62 0.00 34.81 5.54
9358 12445 0.034574 TGGTTGACCCATTGGATCGG 60.035 55.000 3.62 0.00 38.72 4.18
9359 12446 1.340017 ACTGGTTGACCCATTGGATCG 60.340 52.381 3.62 0.00 44.15 3.69
9360 12447 2.094675 CACTGGTTGACCCATTGGATC 58.905 52.381 3.62 0.00 44.15 3.36
9361 12448 1.892329 GCACTGGTTGACCCATTGGAT 60.892 52.381 3.62 0.00 44.15 3.41
9362 12449 0.539438 GCACTGGTTGACCCATTGGA 60.539 55.000 3.62 0.00 44.15 3.53
9363 12450 1.535204 GGCACTGGTTGACCCATTGG 61.535 60.000 0.00 0.00 44.15 3.16
9364 12451 1.865788 CGGCACTGGTTGACCCATTG 61.866 60.000 0.00 0.00 44.15 2.82
9365 12452 1.603455 CGGCACTGGTTGACCCATT 60.603 57.895 0.00 0.00 44.15 3.16
9366 12453 2.034066 CGGCACTGGTTGACCCAT 59.966 61.111 0.00 0.00 44.15 4.00
9367 12454 4.263572 CCGGCACTGGTTGACCCA 62.264 66.667 0.00 0.00 42.51 4.51
9369 12456 4.947147 TGCCGGCACTGGTTGACC 62.947 66.667 29.03 0.00 0.00 4.02
9370 12457 3.660111 GTGCCGGCACTGGTTGAC 61.660 66.667 44.62 21.94 43.12 3.18
9378 12465 2.434359 GTCCAGTAGTGCCGGCAC 60.434 66.667 45.27 45.27 46.50 5.01
9379 12466 3.702048 GGTCCAGTAGTGCCGGCA 61.702 66.667 29.03 29.03 0.00 5.69
9380 12467 4.814294 CGGTCCAGTAGTGCCGGC 62.814 72.222 22.73 22.73 40.45 6.13
9381 12468 1.956629 AATCGGTCCAGTAGTGCCGG 61.957 60.000 14.32 0.00 43.87 6.13
9382 12469 0.527817 GAATCGGTCCAGTAGTGCCG 60.528 60.000 9.61 9.61 44.95 5.69
9383 12470 0.179081 GGAATCGGTCCAGTAGTGCC 60.179 60.000 1.57 0.00 46.97 5.01
9384 12471 3.364277 GGAATCGGTCCAGTAGTGC 57.636 57.895 1.57 0.00 46.97 4.40
9402 12489 0.031721 GTTGGGTCGGCCTCGTATAG 59.968 60.000 5.77 0.00 37.69 1.31
9403 12490 0.683828 TGTTGGGTCGGCCTCGTATA 60.684 55.000 5.77 0.00 37.69 1.47
9404 12491 1.956629 CTGTTGGGTCGGCCTCGTAT 61.957 60.000 5.77 0.00 37.69 3.06
9405 12492 2.601067 TGTTGGGTCGGCCTCGTA 60.601 61.111 5.77 0.00 37.69 3.43
9406 12493 4.003788 CTGTTGGGTCGGCCTCGT 62.004 66.667 5.77 0.00 37.69 4.18
9407 12494 3.691342 TCTGTTGGGTCGGCCTCG 61.691 66.667 5.77 0.00 37.82 4.63
9408 12495 2.047179 GTCTGTTGGGTCGGCCTC 60.047 66.667 5.77 0.00 34.45 4.70
9409 12496 3.637273 GGTCTGTTGGGTCGGCCT 61.637 66.667 5.77 0.00 34.45 5.19
9410 12497 4.717313 GGGTCTGTTGGGTCGGCC 62.717 72.222 0.00 0.00 0.00 6.13
9411 12498 2.764637 ATTGGGTCTGTTGGGTCGGC 62.765 60.000 0.00 0.00 0.00 5.54
9412 12499 0.960364 CATTGGGTCTGTTGGGTCGG 60.960 60.000 0.00 0.00 0.00 4.79
9413 12500 0.960364 CCATTGGGTCTGTTGGGTCG 60.960 60.000 0.00 0.00 0.00 4.79
9414 12501 1.250840 GCCATTGGGTCTGTTGGGTC 61.251 60.000 4.53 0.00 36.17 4.46
9415 12502 1.228862 GCCATTGGGTCTGTTGGGT 60.229 57.895 4.53 0.00 36.17 4.51
9416 12503 1.984026 GGCCATTGGGTCTGTTGGG 60.984 63.158 4.53 0.00 35.27 4.12
9417 12504 3.698765 GGCCATTGGGTCTGTTGG 58.301 61.111 4.53 0.00 35.27 3.77
9423 12510 1.901833 ACAAATCAAGGCCATTGGGTC 59.098 47.619 5.01 0.00 39.54 4.46
9424 12511 2.028561 ACAAATCAAGGCCATTGGGT 57.971 45.000 5.01 0.00 39.54 4.51
9425 12512 3.075884 CAAACAAATCAAGGCCATTGGG 58.924 45.455 5.01 0.00 39.54 4.12
9426 12513 3.075884 CCAAACAAATCAAGGCCATTGG 58.924 45.455 5.01 0.00 39.54 3.16
9427 12514 3.742385 ACCAAACAAATCAAGGCCATTG 58.258 40.909 5.01 7.08 40.52 2.82
9428 12515 3.554752 CGACCAAACAAATCAAGGCCATT 60.555 43.478 5.01 0.00 0.00 3.16
9429 12516 2.029110 CGACCAAACAAATCAAGGCCAT 60.029 45.455 5.01 0.00 0.00 4.40
9430 12517 1.339610 CGACCAAACAAATCAAGGCCA 59.660 47.619 5.01 0.00 0.00 5.36
9431 12518 1.336795 CCGACCAAACAAATCAAGGCC 60.337 52.381 0.00 0.00 0.00 5.19
9432 12519 1.336795 CCCGACCAAACAAATCAAGGC 60.337 52.381 0.00 0.00 0.00 4.35
9433 12520 1.336795 GCCCGACCAAACAAATCAAGG 60.337 52.381 0.00 0.00 0.00 3.61
9434 12521 1.336795 GGCCCGACCAAACAAATCAAG 60.337 52.381 0.00 0.00 38.86 3.02
9435 12522 0.676736 GGCCCGACCAAACAAATCAA 59.323 50.000 0.00 0.00 38.86 2.57
9436 12523 2.346597 GGCCCGACCAAACAAATCA 58.653 52.632 0.00 0.00 38.86 2.57
9467 12554 2.357881 GAACGGGTCGGGTCAACC 60.358 66.667 0.00 0.00 35.97 3.77
9468 12555 2.357881 GGAACGGGTCGGGTCAAC 60.358 66.667 0.00 0.00 0.00 3.18
9469 12556 3.628982 GGGAACGGGTCGGGTCAA 61.629 66.667 0.00 0.00 0.00 3.18
9470 12557 4.938074 TGGGAACGGGTCGGGTCA 62.938 66.667 0.00 0.00 0.00 4.02
9471 12558 3.381333 GATGGGAACGGGTCGGGTC 62.381 68.421 0.00 0.00 0.00 4.46
9472 12559 3.396570 GATGGGAACGGGTCGGGT 61.397 66.667 0.00 0.00 0.00 5.28
9473 12560 2.666098 AAGATGGGAACGGGTCGGG 61.666 63.158 0.00 0.00 0.00 5.14
9474 12561 1.449601 CAAGATGGGAACGGGTCGG 60.450 63.158 0.00 0.00 0.00 4.79
9475 12562 0.739813 GTCAAGATGGGAACGGGTCG 60.740 60.000 0.00 0.00 0.00 4.79
9476 12563 0.323629 TGTCAAGATGGGAACGGGTC 59.676 55.000 0.00 0.00 0.00 4.46
9477 12564 0.036306 GTGTCAAGATGGGAACGGGT 59.964 55.000 0.00 0.00 0.00 5.28
9478 12565 0.036164 TGTGTCAAGATGGGAACGGG 59.964 55.000 0.00 0.00 0.00 5.28
9479 12566 1.156736 GTGTGTCAAGATGGGAACGG 58.843 55.000 0.00 0.00 0.00 4.44
9480 12567 1.800586 CAGTGTGTCAAGATGGGAACG 59.199 52.381 0.00 0.00 0.00 3.95
9481 12568 2.808543 GTCAGTGTGTCAAGATGGGAAC 59.191 50.000 0.00 0.00 0.00 3.62
9482 12569 2.437651 TGTCAGTGTGTCAAGATGGGAA 59.562 45.455 0.00 0.00 0.00 3.97
9483 12570 2.046292 TGTCAGTGTGTCAAGATGGGA 58.954 47.619 0.00 0.00 0.00 4.37
9484 12571 2.549064 TGTCAGTGTGTCAAGATGGG 57.451 50.000 0.00 0.00 0.00 4.00
9485 12572 4.096231 TGTTTTGTCAGTGTGTCAAGATGG 59.904 41.667 0.00 0.00 28.21 3.51
9486 12573 5.233957 TGTTTTGTCAGTGTGTCAAGATG 57.766 39.130 0.00 0.00 28.21 2.90
9487 12574 5.895636 TTGTTTTGTCAGTGTGTCAAGAT 57.104 34.783 0.00 0.00 28.21 2.40
9488 12575 5.697473 TTTGTTTTGTCAGTGTGTCAAGA 57.303 34.783 0.00 0.00 28.21 3.02
9489 12576 4.324402 GCTTTGTTTTGTCAGTGTGTCAAG 59.676 41.667 0.00 0.00 28.21 3.02
9490 12577 4.022416 AGCTTTGTTTTGTCAGTGTGTCAA 60.022 37.500 0.00 0.00 0.00 3.18
9491 12578 3.505680 AGCTTTGTTTTGTCAGTGTGTCA 59.494 39.130 0.00 0.00 0.00 3.58
9492 12579 4.096732 AGCTTTGTTTTGTCAGTGTGTC 57.903 40.909 0.00 0.00 0.00 3.67
9493 12580 3.505680 TGAGCTTTGTTTTGTCAGTGTGT 59.494 39.130 0.00 0.00 0.00 3.72
9498 12585 3.772932 TGCTTGAGCTTTGTTTTGTCAG 58.227 40.909 4.44 0.00 42.66 3.51
9510 12597 2.157738 GACAGTTCCAATGCTTGAGCT 58.842 47.619 4.44 0.00 42.66 4.09
9528 12615 6.363626 CCGTACATCAGCATAACATCTTAGAC 59.636 42.308 0.00 0.00 0.00 2.59
9529 12616 6.040504 ACCGTACATCAGCATAACATCTTAGA 59.959 38.462 0.00 0.00 0.00 2.10
9530 12617 6.216569 ACCGTACATCAGCATAACATCTTAG 58.783 40.000 0.00 0.00 0.00 2.18
9531 12618 6.156748 ACCGTACATCAGCATAACATCTTA 57.843 37.500 0.00 0.00 0.00 2.10
9532 12619 5.023533 ACCGTACATCAGCATAACATCTT 57.976 39.130 0.00 0.00 0.00 2.40
9554 12643 0.324614 CAGTGCATGGGTGTCACCTA 59.675 55.000 21.40 16.49 38.64 3.08
9574 12663 7.012138 TGACGTTCATGACTACTCCTTCTATAC 59.988 40.741 0.00 0.00 0.00 1.47
9579 12668 4.082679 AGTGACGTTCATGACTACTCCTTC 60.083 45.833 0.00 0.00 0.00 3.46
9586 12675 6.147328 CGATATCCTAGTGACGTTCATGACTA 59.853 42.308 0.00 0.00 0.00 2.59
9591 12680 4.142790 ACCGATATCCTAGTGACGTTCAT 58.857 43.478 0.00 0.00 0.00 2.57
9592 12681 3.548770 ACCGATATCCTAGTGACGTTCA 58.451 45.455 0.00 0.00 0.00 3.18
9593 12682 4.378253 GCTACCGATATCCTAGTGACGTTC 60.378 50.000 0.00 0.00 0.00 3.95
9594 12683 3.501445 GCTACCGATATCCTAGTGACGTT 59.499 47.826 0.00 0.00 0.00 3.99
9595 12684 3.072944 GCTACCGATATCCTAGTGACGT 58.927 50.000 0.00 0.00 0.00 4.34
9596 12685 3.072211 TGCTACCGATATCCTAGTGACG 58.928 50.000 0.00 0.00 0.00 4.35
9597 12686 4.325119 TCTGCTACCGATATCCTAGTGAC 58.675 47.826 0.00 0.00 0.00 3.67
9598 12687 4.565861 CCTCTGCTACCGATATCCTAGTGA 60.566 50.000 0.00 0.31 0.00 3.41
9599 12688 3.692101 CCTCTGCTACCGATATCCTAGTG 59.308 52.174 0.00 0.00 0.00 2.74
9600 12689 3.308545 CCCTCTGCTACCGATATCCTAGT 60.309 52.174 0.00 0.00 0.00 2.57
9601 12690 3.054287 TCCCTCTGCTACCGATATCCTAG 60.054 52.174 0.00 0.00 0.00 3.02
9602 12691 2.917600 TCCCTCTGCTACCGATATCCTA 59.082 50.000 0.00 0.00 0.00 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.