Multiple sequence alignment - TraesCS4B01G173900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G173900 chr4B 100.000 2242 0 0 1 2242 381289534 381291775 0.000000e+00 4141.0
1 TraesCS4B01G173900 chr4B 77.364 349 64 9 15 359 17827079 17827416 2.270000e-45 193.0
2 TraesCS4B01G173900 chrUn 98.833 600 7 0 853 1452 407032326 407031727 0.000000e+00 1070.0
3 TraesCS4B01G173900 chrUn 98.500 600 9 0 853 1452 386522809 386523408 0.000000e+00 1059.0
4 TraesCS4B01G173900 chr3B 98.833 600 7 0 853 1452 201495933 201495334 0.000000e+00 1070.0
5 TraesCS4B01G173900 chr3B 85.112 356 44 6 11 365 736427903 736427556 2.740000e-94 355.0
6 TraesCS4B01G173900 chr3B 78.846 364 62 11 2 359 93312800 93313154 4.820000e-57 231.0
7 TraesCS4B01G173900 chr3B 78.788 363 62 9 2 359 93352761 93353113 1.730000e-56 230.0
8 TraesCS4B01G173900 chr3B 77.961 363 66 8 2 359 93452283 93452636 4.850000e-52 215.0
9 TraesCS4B01G173900 chr3B 80.729 192 29 8 1 187 70968369 70968557 2.320000e-30 143.0
10 TraesCS4B01G173900 chr5D 98.500 600 9 0 853 1452 483804846 483805445 0.000000e+00 1059.0
11 TraesCS4B01G173900 chr5D 98.167 600 11 0 853 1452 6233318 6233917 0.000000e+00 1048.0
12 TraesCS4B01G173900 chr1D 98.500 600 9 0 853 1452 254479908 254479309 0.000000e+00 1059.0
13 TraesCS4B01G173900 chr1D 96.833 600 19 0 853 1452 180352816 180353415 0.000000e+00 1003.0
14 TraesCS4B01G173900 chr1D 95.840 601 23 2 853 1452 244211621 244211022 0.000000e+00 970.0
15 TraesCS4B01G173900 chr1D 85.567 97 8 4 2092 2186 354500784 354500692 1.830000e-16 97.1
16 TraesCS4B01G173900 chr1D 85.915 71 8 2 713 781 393685532 393685602 8.590000e-10 75.0
17 TraesCS4B01G173900 chr6D 96.167 600 20 3 853 1452 210722422 210723018 0.000000e+00 977.0
18 TraesCS4B01G173900 chr6D 79.387 359 60 8 5 360 458485906 458486253 8.000000e-60 241.0
19 TraesCS4B01G173900 chr6D 93.269 104 6 1 261 364 17961366 17961468 3.860000e-33 152.0
20 TraesCS4B01G173900 chr4D 86.625 643 80 6 1453 2092 305134152 305134791 0.000000e+00 706.0
21 TraesCS4B01G173900 chr4D 85.535 477 44 13 385 846 305133584 305134050 2.010000e-130 475.0
22 TraesCS4B01G173900 chr4D 83.803 284 37 7 2 284 122008399 122008124 6.140000e-66 261.0
23 TraesCS4B01G173900 chr4D 84.694 98 10 3 2090 2185 38445640 38445546 2.370000e-15 93.5
24 TraesCS4B01G173900 chr4A 82.171 645 84 22 1454 2092 173545820 173546439 1.970000e-145 525.0
25 TraesCS4B01G173900 chr6A 87.187 359 40 2 3 360 426139277 426139630 9.640000e-109 403.0
26 TraesCS4B01G173900 chr6A 86.598 97 7 5 2092 2185 198166081 198165988 3.940000e-18 102.0
27 TraesCS4B01G173900 chr7A 83.056 360 49 6 2 360 681738723 681738375 1.290000e-82 316.0
28 TraesCS4B01G173900 chr2B 83.828 303 26 7 13 314 463276408 463276128 1.320000e-67 267.0
29 TraesCS4B01G173900 chr2B 84.314 102 4 6 2092 2191 706831465 706831374 3.070000e-14 89.8
30 TraesCS4B01G173900 chr2B 82.105 95 11 6 673 761 616938917 616938823 2.390000e-10 76.8
31 TraesCS4B01G173900 chr7D 79.070 344 58 9 16 354 610587422 610587756 8.060000e-55 224.0
32 TraesCS4B01G173900 chr7D 77.907 258 41 10 108 360 29140152 29140398 1.790000e-31 147.0
33 TraesCS4B01G173900 chr6B 75.824 364 77 10 1479 1838 438956885 438956529 8.230000e-40 174.0
34 TraesCS4B01G173900 chr6B 84.466 103 13 3 2092 2191 347752136 347752034 5.100000e-17 99.0
35 TraesCS4B01G173900 chr5B 85.235 149 16 4 213 357 543799497 543799351 4.990000e-32 148.0
36 TraesCS4B01G173900 chr5B 75.962 312 54 17 1 302 107923484 107923784 8.350000e-30 141.0
37 TraesCS4B01G173900 chr2A 80.729 192 29 8 1 187 753991910 753992098 2.320000e-30 143.0
38 TraesCS4B01G173900 chr2A 80.531 113 16 5 673 780 668277329 668277218 5.130000e-12 82.4
39 TraesCS4B01G173900 chr7B 88.421 95 2 4 2092 2185 632792153 632792239 3.050000e-19 106.0
40 TraesCS4B01G173900 chr7B 85.437 103 5 4 2086 2186 684939913 684940007 5.100000e-17 99.0
41 TraesCS4B01G173900 chr5A 85.437 103 8 5 2091 2191 214954461 214954364 1.420000e-17 100.0
42 TraesCS4B01G173900 chr5A 73.649 296 61 12 407 696 674573239 674573523 5.100000e-17 99.0
43 TraesCS4B01G173900 chr1B 85.567 97 3 4 2091 2186 626712891 626712805 8.530000e-15 91.6
44 TraesCS4B01G173900 chr3A 94.872 39 2 0 1550 1588 531632621 531632583 6.690000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G173900 chr4B 381289534 381291775 2241 False 4141.0 4141 100.000 1 2242 1 chr4B.!!$F2 2241
1 TraesCS4B01G173900 chrUn 407031727 407032326 599 True 1070.0 1070 98.833 853 1452 1 chrUn.!!$R1 599
2 TraesCS4B01G173900 chrUn 386522809 386523408 599 False 1059.0 1059 98.500 853 1452 1 chrUn.!!$F1 599
3 TraesCS4B01G173900 chr3B 201495334 201495933 599 True 1070.0 1070 98.833 853 1452 1 chr3B.!!$R1 599
4 TraesCS4B01G173900 chr5D 483804846 483805445 599 False 1059.0 1059 98.500 853 1452 1 chr5D.!!$F2 599
5 TraesCS4B01G173900 chr5D 6233318 6233917 599 False 1048.0 1048 98.167 853 1452 1 chr5D.!!$F1 599
6 TraesCS4B01G173900 chr1D 254479309 254479908 599 True 1059.0 1059 98.500 853 1452 1 chr1D.!!$R2 599
7 TraesCS4B01G173900 chr1D 180352816 180353415 599 False 1003.0 1003 96.833 853 1452 1 chr1D.!!$F1 599
8 TraesCS4B01G173900 chr1D 244211022 244211621 599 True 970.0 970 95.840 853 1452 1 chr1D.!!$R1 599
9 TraesCS4B01G173900 chr6D 210722422 210723018 596 False 977.0 977 96.167 853 1452 1 chr6D.!!$F2 599
10 TraesCS4B01G173900 chr4D 305133584 305134791 1207 False 590.5 706 86.080 385 2092 2 chr4D.!!$F1 1707
11 TraesCS4B01G173900 chr4A 173545820 173546439 619 False 525.0 525 82.171 1454 2092 1 chr4A.!!$F1 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
153 154 0.031585 TCAGTACGCAACGCTTCAGT 59.968 50.0 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1885 1911 0.034337 TGTTGTTCTCACCGCCCTAC 59.966 55.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.028490 TGGGCGCCATCGTTCCTT 62.028 61.111 30.85 0.00 38.14 3.36
18 19 3.202706 GGGCGCCATCGTTCCTTC 61.203 66.667 30.85 1.84 38.14 3.46
19 20 3.202706 GGCGCCATCGTTCCTTCC 61.203 66.667 24.80 0.00 38.14 3.46
20 21 2.125106 GCGCCATCGTTCCTTCCT 60.125 61.111 0.00 0.00 38.14 3.36
21 22 2.464459 GCGCCATCGTTCCTTCCTG 61.464 63.158 0.00 0.00 38.14 3.86
22 23 1.218047 CGCCATCGTTCCTTCCTGA 59.782 57.895 0.00 0.00 0.00 3.86
23 24 0.391130 CGCCATCGTTCCTTCCTGAA 60.391 55.000 0.00 0.00 0.00 3.02
24 25 1.373570 GCCATCGTTCCTTCCTGAAG 58.626 55.000 0.00 0.00 38.14 3.02
32 33 4.625800 CTTCCTGAAGGGCTTCGG 57.374 61.111 0.00 0.00 43.70 4.30
39 40 2.835027 CTGAAGGGCTTCGGGTATAAC 58.165 52.381 0.00 0.00 42.28 1.89
40 41 1.487558 TGAAGGGCTTCGGGTATAACC 59.512 52.381 0.00 0.00 42.28 2.85
51 52 2.491312 GGTATAACCCCCTCCTCACT 57.509 55.000 0.00 0.00 30.04 3.41
52 53 2.047830 GGTATAACCCCCTCCTCACTG 58.952 57.143 0.00 0.00 30.04 3.66
53 54 1.416772 GTATAACCCCCTCCTCACTGC 59.583 57.143 0.00 0.00 0.00 4.40
54 55 0.988678 ATAACCCCCTCCTCACTGCC 60.989 60.000 0.00 0.00 0.00 4.85
55 56 4.984576 TATAACCCCCTCCTCACTGCCC 62.985 59.091 0.00 0.00 0.00 5.36
56 57 4.748798 CCCCCTCCTCACTGCCCT 62.749 72.222 0.00 0.00 0.00 5.19
57 58 2.612115 CCCCTCCTCACTGCCCTT 60.612 66.667 0.00 0.00 0.00 3.95
58 59 2.674220 CCCCTCCTCACTGCCCTTC 61.674 68.421 0.00 0.00 0.00 3.46
59 60 2.581354 CCTCCTCACTGCCCTTCG 59.419 66.667 0.00 0.00 0.00 3.79
60 61 2.125350 CTCCTCACTGCCCTTCGC 60.125 66.667 0.00 0.00 38.31 4.70
68 69 4.169696 TGCCCTTCGCATACCGGG 62.170 66.667 6.32 0.00 44.64 5.73
86 87 2.109425 GGCGAAACCCTATGACTTGT 57.891 50.000 0.00 0.00 0.00 3.16
87 88 2.007608 GGCGAAACCCTATGACTTGTC 58.992 52.381 0.00 0.00 0.00 3.18
88 89 2.007608 GCGAAACCCTATGACTTGTCC 58.992 52.381 0.00 0.00 0.00 4.02
89 90 2.268298 CGAAACCCTATGACTTGTCCG 58.732 52.381 0.00 0.00 0.00 4.79
90 91 2.629051 GAAACCCTATGACTTGTCCGG 58.371 52.381 0.00 0.00 0.00 5.14
91 92 0.909623 AACCCTATGACTTGTCCGGG 59.090 55.000 0.00 14.26 37.70 5.73
92 93 1.146263 CCCTATGACTTGTCCGGGC 59.854 63.158 0.00 0.00 0.00 6.13
93 94 1.622607 CCCTATGACTTGTCCGGGCA 61.623 60.000 3.51 3.51 0.00 5.36
94 95 0.251916 CCTATGACTTGTCCGGGCAA 59.748 55.000 22.34 22.34 0.00 4.52
95 96 1.369625 CTATGACTTGTCCGGGCAAC 58.630 55.000 19.68 10.19 0.00 4.17
96 97 0.390603 TATGACTTGTCCGGGCAACG 60.391 55.000 19.68 16.33 43.80 4.10
108 109 3.017323 GCAACGGCCTCATCATCG 58.983 61.111 0.00 0.00 0.00 3.84
109 110 1.815421 GCAACGGCCTCATCATCGT 60.815 57.895 0.00 0.00 37.45 3.73
110 111 1.766143 GCAACGGCCTCATCATCGTC 61.766 60.000 0.00 0.00 34.60 4.20
111 112 1.226974 AACGGCCTCATCATCGTCG 60.227 57.895 0.00 0.00 34.60 5.12
112 113 3.032609 CGGCCTCATCATCGTCGC 61.033 66.667 0.00 0.00 0.00 5.19
113 114 2.419198 GGCCTCATCATCGTCGCT 59.581 61.111 0.00 0.00 0.00 4.93
114 115 1.227380 GGCCTCATCATCGTCGCTT 60.227 57.895 0.00 0.00 0.00 4.68
115 116 0.811616 GGCCTCATCATCGTCGCTTT 60.812 55.000 0.00 0.00 0.00 3.51
116 117 0.579156 GCCTCATCATCGTCGCTTTC 59.421 55.000 0.00 0.00 0.00 2.62
117 118 1.212616 CCTCATCATCGTCGCTTTCC 58.787 55.000 0.00 0.00 0.00 3.13
118 119 1.202463 CCTCATCATCGTCGCTTTCCT 60.202 52.381 0.00 0.00 0.00 3.36
119 120 2.544685 CTCATCATCGTCGCTTTCCTT 58.455 47.619 0.00 0.00 0.00 3.36
120 121 2.537625 CTCATCATCGTCGCTTTCCTTC 59.462 50.000 0.00 0.00 0.00 3.46
121 122 2.166459 TCATCATCGTCGCTTTCCTTCT 59.834 45.455 0.00 0.00 0.00 2.85
122 123 2.743636 TCATCGTCGCTTTCCTTCTT 57.256 45.000 0.00 0.00 0.00 2.52
123 124 2.337583 TCATCGTCGCTTTCCTTCTTG 58.662 47.619 0.00 0.00 0.00 3.02
124 125 2.029380 TCATCGTCGCTTTCCTTCTTGA 60.029 45.455 0.00 0.00 0.00 3.02
125 126 2.519377 TCGTCGCTTTCCTTCTTGAA 57.481 45.000 0.00 0.00 0.00 2.69
126 127 2.404215 TCGTCGCTTTCCTTCTTGAAG 58.596 47.619 3.55 3.55 0.00 3.02
127 128 1.461127 CGTCGCTTTCCTTCTTGAAGG 59.539 52.381 20.21 20.21 41.35 3.46
128 129 2.495084 GTCGCTTTCCTTCTTGAAGGT 58.505 47.619 23.78 0.00 40.81 3.50
129 130 2.224314 GTCGCTTTCCTTCTTGAAGGTG 59.776 50.000 23.78 17.12 40.81 4.00
130 131 2.158813 TCGCTTTCCTTCTTGAAGGTGT 60.159 45.455 23.78 0.00 40.81 4.16
131 132 2.618709 CGCTTTCCTTCTTGAAGGTGTT 59.381 45.455 23.78 0.00 40.81 3.32
132 133 3.548818 CGCTTTCCTTCTTGAAGGTGTTG 60.549 47.826 23.78 15.28 40.81 3.33
133 134 3.796844 GCTTTCCTTCTTGAAGGTGTTGC 60.797 47.826 23.78 19.38 40.81 4.17
134 135 3.297134 TTCCTTCTTGAAGGTGTTGCT 57.703 42.857 23.78 0.00 40.81 3.91
135 136 2.851195 TCCTTCTTGAAGGTGTTGCTC 58.149 47.619 23.78 0.00 40.81 4.26
136 137 2.172505 TCCTTCTTGAAGGTGTTGCTCA 59.827 45.455 23.78 4.62 40.81 4.26
137 138 2.551459 CCTTCTTGAAGGTGTTGCTCAG 59.449 50.000 18.52 0.00 35.22 3.35
138 139 3.209410 CTTCTTGAAGGTGTTGCTCAGT 58.791 45.455 2.63 0.00 0.00 3.41
139 140 4.380531 CTTCTTGAAGGTGTTGCTCAGTA 58.619 43.478 2.63 0.00 0.00 2.74
140 141 3.728845 TCTTGAAGGTGTTGCTCAGTAC 58.271 45.455 0.00 0.00 0.00 2.73
141 142 2.148916 TGAAGGTGTTGCTCAGTACG 57.851 50.000 0.00 0.00 0.00 3.67
142 143 0.790814 GAAGGTGTTGCTCAGTACGC 59.209 55.000 0.00 0.00 0.00 4.42
143 144 0.105964 AAGGTGTTGCTCAGTACGCA 59.894 50.000 0.00 0.00 35.22 5.24
144 145 0.105964 AGGTGTTGCTCAGTACGCAA 59.894 50.000 2.94 2.94 44.36 4.85
147 148 3.240203 TTGCTCAGTACGCAACGC 58.760 55.556 2.94 0.00 41.97 4.84
148 149 1.300620 TTGCTCAGTACGCAACGCT 60.301 52.632 2.94 0.00 41.97 5.07
149 150 0.878523 TTGCTCAGTACGCAACGCTT 60.879 50.000 2.94 0.00 41.97 4.68
150 151 1.282248 TGCTCAGTACGCAACGCTTC 61.282 55.000 0.00 0.00 33.87 3.86
151 152 1.282248 GCTCAGTACGCAACGCTTCA 61.282 55.000 0.00 0.00 0.00 3.02
152 153 0.710567 CTCAGTACGCAACGCTTCAG 59.289 55.000 0.00 0.00 0.00 3.02
153 154 0.031585 TCAGTACGCAACGCTTCAGT 59.968 50.000 0.00 0.00 0.00 3.41
154 155 0.161658 CAGTACGCAACGCTTCAGTG 59.838 55.000 0.00 0.00 0.00 3.66
155 156 0.249322 AGTACGCAACGCTTCAGTGT 60.249 50.000 0.00 0.00 41.05 3.55
156 157 0.111266 GTACGCAACGCTTCAGTGTG 60.111 55.000 0.00 0.00 38.96 3.82
157 158 1.827315 TACGCAACGCTTCAGTGTGC 61.827 55.000 0.00 0.18 38.96 4.57
158 159 2.885676 CGCAACGCTTCAGTGTGCT 61.886 57.895 8.65 0.00 38.96 4.40
159 160 1.356624 GCAACGCTTCAGTGTGCTT 59.643 52.632 8.65 0.00 38.96 3.91
160 161 0.931662 GCAACGCTTCAGTGTGCTTG 60.932 55.000 8.65 11.20 38.96 4.01
161 162 0.317269 CAACGCTTCAGTGTGCTTGG 60.317 55.000 8.65 0.00 38.96 3.61
162 163 2.063541 AACGCTTCAGTGTGCTTGGC 62.064 55.000 8.65 0.00 38.96 4.52
163 164 2.253452 GCTTCAGTGTGCTTGGCG 59.747 61.111 4.17 0.00 0.00 5.69
164 165 2.546494 GCTTCAGTGTGCTTGGCGT 61.546 57.895 4.17 0.00 0.00 5.68
165 166 1.280746 CTTCAGTGTGCTTGGCGTG 59.719 57.895 0.00 0.00 0.00 5.34
166 167 1.439353 CTTCAGTGTGCTTGGCGTGT 61.439 55.000 0.00 0.00 0.00 4.49
167 168 1.713937 TTCAGTGTGCTTGGCGTGTG 61.714 55.000 0.00 0.00 0.00 3.82
168 169 2.901840 AGTGTGCTTGGCGTGTGG 60.902 61.111 0.00 0.00 0.00 4.17
169 170 3.209097 GTGTGCTTGGCGTGTGGT 61.209 61.111 0.00 0.00 0.00 4.16
170 171 3.208383 TGTGCTTGGCGTGTGGTG 61.208 61.111 0.00 0.00 0.00 4.17
171 172 3.964875 GTGCTTGGCGTGTGGTGG 61.965 66.667 0.00 0.00 0.00 4.61
172 173 4.497984 TGCTTGGCGTGTGGTGGT 62.498 61.111 0.00 0.00 0.00 4.16
173 174 2.281208 GCTTGGCGTGTGGTGGTA 60.281 61.111 0.00 0.00 0.00 3.25
174 175 1.894756 GCTTGGCGTGTGGTGGTAA 60.895 57.895 0.00 0.00 0.00 2.85
175 176 1.448922 GCTTGGCGTGTGGTGGTAAA 61.449 55.000 0.00 0.00 0.00 2.01
176 177 1.243902 CTTGGCGTGTGGTGGTAAAT 58.756 50.000 0.00 0.00 0.00 1.40
177 178 1.199097 CTTGGCGTGTGGTGGTAAATC 59.801 52.381 0.00 0.00 0.00 2.17
178 179 0.398696 TGGCGTGTGGTGGTAAATCT 59.601 50.000 0.00 0.00 0.00 2.40
179 180 1.084289 GGCGTGTGGTGGTAAATCTC 58.916 55.000 0.00 0.00 0.00 2.75
180 181 1.084289 GCGTGTGGTGGTAAATCTCC 58.916 55.000 0.00 0.00 0.00 3.71
181 182 1.355971 CGTGTGGTGGTAAATCTCCG 58.644 55.000 0.00 0.00 0.00 4.63
182 183 1.734163 GTGTGGTGGTAAATCTCCGG 58.266 55.000 0.00 0.00 0.00 5.14
183 184 0.616371 TGTGGTGGTAAATCTCCGGG 59.384 55.000 0.00 0.00 0.00 5.73
184 185 0.107361 GTGGTGGTAAATCTCCGGGG 60.107 60.000 0.00 0.00 0.00 5.73
185 186 1.276140 TGGTGGTAAATCTCCGGGGG 61.276 60.000 0.00 0.00 0.00 5.40
210 211 3.202706 GCGATGGCTCCCGGTTTC 61.203 66.667 0.00 0.00 35.83 2.78
211 212 2.584608 CGATGGCTCCCGGTTTCT 59.415 61.111 0.00 0.00 0.00 2.52
212 213 1.078426 CGATGGCTCCCGGTTTCTT 60.078 57.895 0.00 0.00 0.00 2.52
213 214 1.090052 CGATGGCTCCCGGTTTCTTC 61.090 60.000 0.00 0.00 0.00 2.87
214 215 0.253327 GATGGCTCCCGGTTTCTTCT 59.747 55.000 0.00 0.00 0.00 2.85
215 216 0.698818 ATGGCTCCCGGTTTCTTCTT 59.301 50.000 0.00 0.00 0.00 2.52
216 217 0.036306 TGGCTCCCGGTTTCTTCTTC 59.964 55.000 0.00 0.00 0.00 2.87
217 218 1.019805 GGCTCCCGGTTTCTTCTTCG 61.020 60.000 0.00 0.00 0.00 3.79
218 219 0.320508 GCTCCCGGTTTCTTCTTCGT 60.321 55.000 0.00 0.00 0.00 3.85
219 220 1.876837 GCTCCCGGTTTCTTCTTCGTT 60.877 52.381 0.00 0.00 0.00 3.85
220 221 2.490991 CTCCCGGTTTCTTCTTCGTTT 58.509 47.619 0.00 0.00 0.00 3.60
221 222 2.479275 CTCCCGGTTTCTTCTTCGTTTC 59.521 50.000 0.00 0.00 0.00 2.78
222 223 1.193874 CCCGGTTTCTTCTTCGTTTCG 59.806 52.381 0.00 0.00 0.00 3.46
223 224 1.862827 CCGGTTTCTTCTTCGTTTCGT 59.137 47.619 0.00 0.00 0.00 3.85
224 225 2.286025 CCGGTTTCTTCTTCGTTTCGTT 59.714 45.455 0.00 0.00 0.00 3.85
225 226 3.490526 CCGGTTTCTTCTTCGTTTCGTTA 59.509 43.478 0.00 0.00 0.00 3.18
226 227 4.025813 CCGGTTTCTTCTTCGTTTCGTTAA 60.026 41.667 0.00 0.00 0.00 2.01
227 228 5.128468 CGGTTTCTTCTTCGTTTCGTTAAG 58.872 41.667 0.00 0.00 0.00 1.85
228 229 4.902448 GGTTTCTTCTTCGTTTCGTTAAGC 59.098 41.667 0.00 0.00 0.00 3.09
229 230 5.277202 GGTTTCTTCTTCGTTTCGTTAAGCT 60.277 40.000 0.00 0.00 0.00 3.74
230 231 4.966850 TCTTCTTCGTTTCGTTAAGCTG 57.033 40.909 0.00 0.00 0.00 4.24
231 232 3.183775 TCTTCTTCGTTTCGTTAAGCTGC 59.816 43.478 0.00 0.00 0.00 5.25
232 233 1.796459 TCTTCGTTTCGTTAAGCTGCC 59.204 47.619 0.00 0.00 0.00 4.85
233 234 0.509499 TTCGTTTCGTTAAGCTGCCG 59.491 50.000 0.00 0.00 0.00 5.69
234 235 1.131826 CGTTTCGTTAAGCTGCCGG 59.868 57.895 0.00 0.00 0.00 6.13
235 236 1.562575 CGTTTCGTTAAGCTGCCGGT 61.563 55.000 1.90 0.00 0.00 5.28
236 237 0.110373 GTTTCGTTAAGCTGCCGGTG 60.110 55.000 1.90 0.00 0.00 4.94
237 238 0.533308 TTTCGTTAAGCTGCCGGTGT 60.533 50.000 1.90 0.00 0.00 4.16
238 239 0.947180 TTCGTTAAGCTGCCGGTGTC 60.947 55.000 1.90 0.00 0.00 3.67
239 240 2.726691 CGTTAAGCTGCCGGTGTCG 61.727 63.158 1.90 0.00 0.00 4.35
250 251 3.086161 CGGTGTCGGCATTTGTTTC 57.914 52.632 0.00 0.00 0.00 2.78
251 252 0.591170 CGGTGTCGGCATTTGTTTCT 59.409 50.000 0.00 0.00 0.00 2.52
252 253 1.399727 CGGTGTCGGCATTTGTTTCTC 60.400 52.381 0.00 0.00 0.00 2.87
253 254 1.880027 GGTGTCGGCATTTGTTTCTCT 59.120 47.619 0.00 0.00 0.00 3.10
254 255 2.293399 GGTGTCGGCATTTGTTTCTCTT 59.707 45.455 0.00 0.00 0.00 2.85
255 256 3.243401 GGTGTCGGCATTTGTTTCTCTTT 60.243 43.478 0.00 0.00 0.00 2.52
256 257 4.359706 GTGTCGGCATTTGTTTCTCTTTT 58.640 39.130 0.00 0.00 0.00 2.27
257 258 4.207019 GTGTCGGCATTTGTTTCTCTTTTG 59.793 41.667 0.00 0.00 0.00 2.44
258 259 4.142271 TGTCGGCATTTGTTTCTCTTTTGT 60.142 37.500 0.00 0.00 0.00 2.83
259 260 4.441087 GTCGGCATTTGTTTCTCTTTTGTC 59.559 41.667 0.00 0.00 0.00 3.18
260 261 4.338118 TCGGCATTTGTTTCTCTTTTGTCT 59.662 37.500 0.00 0.00 0.00 3.41
261 262 5.043248 CGGCATTTGTTTCTCTTTTGTCTT 58.957 37.500 0.00 0.00 0.00 3.01
262 263 5.051508 CGGCATTTGTTTCTCTTTTGTCTTG 60.052 40.000 0.00 0.00 0.00 3.02
263 264 5.812127 GGCATTTGTTTCTCTTTTGTCTTGT 59.188 36.000 0.00 0.00 0.00 3.16
264 265 6.313658 GGCATTTGTTTCTCTTTTGTCTTGTT 59.686 34.615 0.00 0.00 0.00 2.83
265 266 7.175410 GCATTTGTTTCTCTTTTGTCTTGTTG 58.825 34.615 0.00 0.00 0.00 3.33
266 267 7.148590 GCATTTGTTTCTCTTTTGTCTTGTTGT 60.149 33.333 0.00 0.00 0.00 3.32
267 268 8.711457 CATTTGTTTCTCTTTTGTCTTGTTGTT 58.289 29.630 0.00 0.00 0.00 2.83
268 269 8.655651 TTTGTTTCTCTTTTGTCTTGTTGTTT 57.344 26.923 0.00 0.00 0.00 2.83
269 270 8.655651 TTGTTTCTCTTTTGTCTTGTTGTTTT 57.344 26.923 0.00 0.00 0.00 2.43
270 271 8.293114 TGTTTCTCTTTTGTCTTGTTGTTTTC 57.707 30.769 0.00 0.00 0.00 2.29
271 272 8.141268 TGTTTCTCTTTTGTCTTGTTGTTTTCT 58.859 29.630 0.00 0.00 0.00 2.52
272 273 8.978539 GTTTCTCTTTTGTCTTGTTGTTTTCTT 58.021 29.630 0.00 0.00 0.00 2.52
273 274 9.541143 TTTCTCTTTTGTCTTGTTGTTTTCTTT 57.459 25.926 0.00 0.00 0.00 2.52
274 275 8.519492 TCTCTTTTGTCTTGTTGTTTTCTTTG 57.481 30.769 0.00 0.00 0.00 2.77
275 276 7.598493 TCTCTTTTGTCTTGTTGTTTTCTTTGG 59.402 33.333 0.00 0.00 0.00 3.28
276 277 6.648725 TCTTTTGTCTTGTTGTTTTCTTTGGG 59.351 34.615 0.00 0.00 0.00 4.12
277 278 3.855858 TGTCTTGTTGTTTTCTTTGGGC 58.144 40.909 0.00 0.00 0.00 5.36
278 279 3.513515 TGTCTTGTTGTTTTCTTTGGGCT 59.486 39.130 0.00 0.00 0.00 5.19
279 280 4.020662 TGTCTTGTTGTTTTCTTTGGGCTT 60.021 37.500 0.00 0.00 0.00 4.35
280 281 4.329801 GTCTTGTTGTTTTCTTTGGGCTTG 59.670 41.667 0.00 0.00 0.00 4.01
281 282 3.258971 TGTTGTTTTCTTTGGGCTTGG 57.741 42.857 0.00 0.00 0.00 3.61
282 283 2.569404 TGTTGTTTTCTTTGGGCTTGGT 59.431 40.909 0.00 0.00 0.00 3.67
283 284 3.008485 TGTTGTTTTCTTTGGGCTTGGTT 59.992 39.130 0.00 0.00 0.00 3.67
284 285 3.258971 TGTTTTCTTTGGGCTTGGTTG 57.741 42.857 0.00 0.00 0.00 3.77
285 286 2.569404 TGTTTTCTTTGGGCTTGGTTGT 59.431 40.909 0.00 0.00 0.00 3.32
286 287 2.935849 GTTTTCTTTGGGCTTGGTTGTG 59.064 45.455 0.00 0.00 0.00 3.33
287 288 0.463620 TTCTTTGGGCTTGGTTGTGC 59.536 50.000 0.00 0.00 0.00 4.57
288 289 0.396974 TCTTTGGGCTTGGTTGTGCT 60.397 50.000 0.00 0.00 0.00 4.40
289 290 0.249573 CTTTGGGCTTGGTTGTGCTG 60.250 55.000 0.00 0.00 0.00 4.41
290 291 2.308968 TTTGGGCTTGGTTGTGCTGC 62.309 55.000 0.00 0.00 0.00 5.25
291 292 4.347453 GGGCTTGGTTGTGCTGCG 62.347 66.667 0.00 0.00 0.00 5.18
292 293 4.347453 GGCTTGGTTGTGCTGCGG 62.347 66.667 0.00 0.00 0.00 5.69
294 295 4.347453 CTTGGTTGTGCTGCGGCC 62.347 66.667 16.57 7.08 37.74 6.13
308 309 2.604382 GGCCCCAGCATGTTGGTT 60.604 61.111 24.96 0.00 42.56 3.67
309 310 2.658422 GCCCCAGCATGTTGGTTG 59.342 61.111 24.96 17.07 39.53 3.77
310 311 2.209315 GCCCCAGCATGTTGGTTGT 61.209 57.895 24.96 0.00 39.53 3.32
311 312 0.897863 GCCCCAGCATGTTGGTTGTA 60.898 55.000 24.96 0.00 39.53 2.41
312 313 1.851304 CCCCAGCATGTTGGTTGTAT 58.149 50.000 24.96 0.00 36.45 2.29
313 314 1.750778 CCCCAGCATGTTGGTTGTATC 59.249 52.381 24.96 0.00 36.45 2.24
314 315 2.621407 CCCCAGCATGTTGGTTGTATCT 60.621 50.000 24.96 0.00 36.45 1.98
315 316 3.091545 CCCAGCATGTTGGTTGTATCTT 58.908 45.455 24.96 0.00 36.45 2.40
316 317 3.119388 CCCAGCATGTTGGTTGTATCTTG 60.119 47.826 24.96 4.77 36.45 3.02
317 318 3.507233 CCAGCATGTTGGTTGTATCTTGT 59.493 43.478 19.77 0.00 33.38 3.16
318 319 4.478699 CAGCATGTTGGTTGTATCTTGTG 58.521 43.478 0.85 0.00 0.00 3.33
319 320 3.507233 AGCATGTTGGTTGTATCTTGTGG 59.493 43.478 0.00 0.00 0.00 4.17
320 321 3.255642 GCATGTTGGTTGTATCTTGTGGT 59.744 43.478 0.00 0.00 0.00 4.16
321 322 4.797471 CATGTTGGTTGTATCTTGTGGTG 58.203 43.478 0.00 0.00 0.00 4.17
322 323 3.218453 TGTTGGTTGTATCTTGTGGTGG 58.782 45.455 0.00 0.00 0.00 4.61
323 324 1.904287 TGGTTGTATCTTGTGGTGGC 58.096 50.000 0.00 0.00 0.00 5.01
324 325 1.423541 TGGTTGTATCTTGTGGTGGCT 59.576 47.619 0.00 0.00 0.00 4.75
325 326 2.158534 TGGTTGTATCTTGTGGTGGCTT 60.159 45.455 0.00 0.00 0.00 4.35
326 327 2.890945 GGTTGTATCTTGTGGTGGCTTT 59.109 45.455 0.00 0.00 0.00 3.51
327 328 4.076394 GGTTGTATCTTGTGGTGGCTTTA 58.924 43.478 0.00 0.00 0.00 1.85
328 329 4.705023 GGTTGTATCTTGTGGTGGCTTTAT 59.295 41.667 0.00 0.00 0.00 1.40
329 330 5.883673 GGTTGTATCTTGTGGTGGCTTTATA 59.116 40.000 0.00 0.00 0.00 0.98
330 331 6.376018 GGTTGTATCTTGTGGTGGCTTTATAA 59.624 38.462 0.00 0.00 0.00 0.98
331 332 7.068226 GGTTGTATCTTGTGGTGGCTTTATAAT 59.932 37.037 0.00 0.00 0.00 1.28
332 333 9.116067 GTTGTATCTTGTGGTGGCTTTATAATA 57.884 33.333 0.00 0.00 0.00 0.98
333 334 9.860650 TTGTATCTTGTGGTGGCTTTATAATAT 57.139 29.630 0.00 0.00 0.00 1.28
365 366 5.654603 GGAAACCCTTTATCGTCCAATTT 57.345 39.130 0.00 0.00 0.00 1.82
366 367 5.407502 GGAAACCCTTTATCGTCCAATTTG 58.592 41.667 0.00 0.00 0.00 2.32
367 368 5.400066 AAACCCTTTATCGTCCAATTTGG 57.600 39.130 9.28 9.28 39.43 3.28
368 369 4.310022 ACCCTTTATCGTCCAATTTGGA 57.690 40.909 14.24 14.24 45.98 3.53
375 376 4.413928 TCCAATTTGGAGGGCACG 57.586 55.556 14.24 0.00 42.67 5.34
376 377 1.976474 TCCAATTTGGAGGGCACGC 60.976 57.895 14.24 0.00 42.67 5.34
377 378 2.274645 CCAATTTGGAGGGCACGCA 61.275 57.895 10.03 0.00 40.96 5.24
378 379 1.213537 CAATTTGGAGGGCACGCAG 59.786 57.895 0.00 0.00 0.00 5.18
379 380 1.074775 AATTTGGAGGGCACGCAGA 59.925 52.632 0.00 0.00 0.00 4.26
380 381 0.323725 AATTTGGAGGGCACGCAGAT 60.324 50.000 0.00 0.00 0.00 2.90
381 382 1.033746 ATTTGGAGGGCACGCAGATG 61.034 55.000 0.00 0.00 0.00 2.90
382 383 2.123248 TTTGGAGGGCACGCAGATGA 62.123 55.000 0.00 0.00 0.00 2.92
383 384 2.202987 GGAGGGCACGCAGATGAG 60.203 66.667 0.00 0.00 0.00 2.90
395 396 1.539869 AGATGAGGGGCACACACCT 60.540 57.895 0.00 0.00 40.54 4.00
397 398 2.129555 GATGAGGGGCACACACCTGT 62.130 60.000 0.00 0.00 37.18 4.00
399 400 2.772191 AGGGGCACACACCTGTCA 60.772 61.111 0.00 0.00 35.30 3.58
401 402 2.510906 GGGCACACACCTGTCAGT 59.489 61.111 0.00 0.00 0.00 3.41
403 404 1.956170 GGCACACACCTGTCAGTCG 60.956 63.158 0.00 0.00 0.00 4.18
411 413 4.406173 CTGTCAGTCGCGTCGGCT 62.406 66.667 5.77 0.54 44.88 5.52
466 468 0.739462 CCCGCACGAGAGCACAATAA 60.739 55.000 0.00 0.00 0.00 1.40
471 473 4.201773 CCGCACGAGAGCACAATAAATTTA 60.202 41.667 0.00 0.00 0.00 1.40
472 474 5.320723 CGCACGAGAGCACAATAAATTTAA 58.679 37.500 1.21 0.00 0.00 1.52
473 475 5.792962 CGCACGAGAGCACAATAAATTTAAA 59.207 36.000 1.21 0.00 0.00 1.52
474 476 6.022251 CGCACGAGAGCACAATAAATTTAAAG 60.022 38.462 1.21 0.65 0.00 1.85
475 477 6.801862 GCACGAGAGCACAATAAATTTAAAGT 59.198 34.615 1.21 1.28 0.00 2.66
476 478 7.326063 GCACGAGAGCACAATAAATTTAAAGTT 59.674 33.333 6.13 6.13 0.00 2.66
477 479 9.180678 CACGAGAGCACAATAAATTTAAAGTTT 57.819 29.630 6.17 4.00 0.00 2.66
478 480 9.394477 ACGAGAGCACAATAAATTTAAAGTTTC 57.606 29.630 6.17 4.82 0.00 2.78
510 513 6.380095 AGTTTTGAAACTTACGTTATGCCA 57.620 33.333 0.00 0.00 46.52 4.92
514 517 4.633175 TGAAACTTACGTTATGCCAGTCA 58.367 39.130 0.00 0.00 31.86 3.41
522 525 3.131396 CGTTATGCCAGTCATAGGTTCC 58.869 50.000 0.00 0.00 38.75 3.62
537 540 7.325579 GTCATAGGTTCCGATACTTACGATTTC 59.674 40.741 0.00 0.00 0.00 2.17
564 567 1.986378 CGCTCGTACCAAGTTTCAGAG 59.014 52.381 0.00 0.00 0.00 3.35
566 569 2.288886 GCTCGTACCAAGTTTCAGAGGT 60.289 50.000 0.00 0.00 38.14 3.85
582 585 5.577835 TCAGAGGTTGAAACATTTTTGTCG 58.422 37.500 0.00 0.00 31.34 4.35
586 589 6.039270 AGAGGTTGAAACATTTTTGTCGATCA 59.961 34.615 0.00 0.00 0.00 2.92
594 597 8.511604 AAACATTTTTGTCGATCATAGGATCT 57.488 30.769 14.91 0.00 46.36 2.75
595 598 9.613428 AAACATTTTTGTCGATCATAGGATCTA 57.387 29.630 14.91 1.61 46.36 1.98
596 599 9.613428 AACATTTTTGTCGATCATAGGATCTAA 57.387 29.630 14.91 5.41 46.36 2.10
603 606 8.007405 TGTCGATCATAGGATCTAAAAACTCA 57.993 34.615 14.91 0.00 46.36 3.41
605 608 7.921214 GTCGATCATAGGATCTAAAAACTCACA 59.079 37.037 14.91 0.00 46.36 3.58
637 640 7.850982 GTGTGTAGTTTGTATCAAGTTTCACTG 59.149 37.037 0.00 0.00 0.00 3.66
638 641 7.011950 TGTGTAGTTTGTATCAAGTTTCACTGG 59.988 37.037 0.00 0.00 0.00 4.00
699 702 5.649395 TCAAAATGGATCTCATTCGAAAGCT 59.351 36.000 0.00 0.00 44.68 3.74
700 703 5.747951 AAATGGATCTCATTCGAAAGCTC 57.252 39.130 0.00 0.00 44.68 4.09
709 712 2.051879 TTCGAAAGCTCTCGTCACAG 57.948 50.000 9.66 0.00 39.84 3.66
713 716 2.755650 GAAAGCTCTCGTCACAGGAAA 58.244 47.619 0.00 0.00 0.00 3.13
801 817 2.732597 GCTACGTGCTACAAGTCCTCTG 60.733 54.545 0.00 0.00 38.95 3.35
834 850 6.079763 ACTGACGATGAATTCAATTGTTTCG 58.920 36.000 19.88 19.88 0.00 3.46
840 856 9.619316 ACGATGAATTCAATTGTTTCGAAATAA 57.381 25.926 25.49 20.26 0.00 1.40
849 865 9.611284 TCAATTGTTTCGAAATAAATGTCTCTG 57.389 29.630 25.27 16.85 0.00 3.35
850 866 8.368126 CAATTGTTTCGAAATAAATGTCTCTGC 58.632 33.333 21.54 2.28 0.00 4.26
851 867 6.801539 TGTTTCGAAATAAATGTCTCTGCT 57.198 33.333 14.69 0.00 0.00 4.24
1051 1067 7.284074 TCCTAAGCGAATTATTTGGGATTGTA 58.716 34.615 0.00 0.00 0.00 2.41
1173 1189 0.036388 GCCTCCTCAACGACCAATGA 60.036 55.000 0.00 0.00 0.00 2.57
1470 1492 0.793104 GCCAAACGCGTCTGCAATAC 60.793 55.000 14.44 0.00 42.97 1.89
1475 1497 1.280982 ACGCGTCTGCAATACTGATG 58.719 50.000 5.58 0.00 42.97 3.07
1476 1498 1.280982 CGCGTCTGCAATACTGATGT 58.719 50.000 0.00 0.00 42.97 3.06
1528 1553 3.475242 ACGTTCGCATACATTTCAAACG 58.525 40.909 0.00 0.00 42.51 3.60
1548 1574 5.541098 ACGGAATTTGAAAATAGGACGAC 57.459 39.130 0.00 0.00 0.00 4.34
1561 1587 8.617290 AAAATAGGACGACTTTCATGTAAACT 57.383 30.769 0.00 0.00 0.00 2.66
1564 1590 3.435671 GGACGACTTTCATGTAAACTGGG 59.564 47.826 0.00 0.00 0.00 4.45
1575 1601 7.537596 TCATGTAAACTGGGTGATTTTCATT 57.462 32.000 0.00 0.00 0.00 2.57
1664 1690 1.669049 ATATTCGCCGGTGTCCGTCA 61.669 55.000 16.01 0.00 46.80 4.35
1679 1705 4.202274 TGTCCGTCATCCAAGTCTTTGTTA 60.202 41.667 0.00 0.00 32.21 2.41
1683 1709 5.643777 CCGTCATCCAAGTCTTTGTTATTCT 59.356 40.000 0.00 0.00 32.21 2.40
1700 1726 3.981071 TTCTCCATGTCCGACATCTTT 57.019 42.857 11.24 0.00 36.53 2.52
1712 1738 0.611618 ACATCTTTGCCGGCCATGAA 60.612 50.000 26.77 8.70 0.00 2.57
1713 1739 0.531657 CATCTTTGCCGGCCATGAAA 59.468 50.000 26.77 16.65 0.00 2.69
1715 1741 0.539438 TCTTTGCCGGCCATGAAACT 60.539 50.000 26.77 0.00 0.00 2.66
1743 1769 4.539083 AGTTGCGTGTCACCGGCA 62.539 61.111 0.00 1.84 34.35 5.69
1769 1795 4.427096 AGAGTAAGACATGTGACACGAG 57.573 45.455 1.15 0.00 0.00 4.18
1773 1799 0.319900 AGACATGTGACACGAGCACC 60.320 55.000 1.15 0.00 35.43 5.01
1777 1803 0.392706 ATGTGACACGAGCACCTTCA 59.607 50.000 0.22 0.00 35.43 3.02
1781 1807 1.344438 TGACACGAGCACCTTCATCTT 59.656 47.619 0.00 0.00 0.00 2.40
1792 1818 5.843421 AGCACCTTCATCTTCTATGTCCTAT 59.157 40.000 0.00 0.00 0.00 2.57
1793 1819 6.328672 AGCACCTTCATCTTCTATGTCCTATT 59.671 38.462 0.00 0.00 0.00 1.73
1812 1838 8.041323 GTCCTATTAATTCTTTGTCAGAGTCCA 58.959 37.037 0.00 0.00 31.12 4.02
1820 1846 1.840737 TGTCAGAGTCCAGAGCCTAC 58.159 55.000 0.00 0.00 0.00 3.18
1827 1853 1.014564 GTCCAGAGCCTACACGTTGC 61.015 60.000 0.00 0.00 0.00 4.17
1877 1903 1.032114 GTGGTCATAGTGGCCCAAGC 61.032 60.000 0.00 0.00 42.76 4.01
1903 1929 1.012486 CGTAGGGCGGTGAGAACAAC 61.012 60.000 0.00 0.00 36.85 3.32
1904 1930 0.034337 GTAGGGCGGTGAGAACAACA 59.966 55.000 0.00 0.00 32.53 3.33
1969 1995 2.680352 ACCTCCGTGTCCGATGCT 60.680 61.111 0.00 0.00 35.63 3.79
1971 1997 2.887568 CTCCGTGTCCGATGCTGC 60.888 66.667 0.00 0.00 35.63 5.25
2022 2048 2.028130 CTAGTAGGACTCCCACTGCTG 58.972 57.143 6.43 0.00 31.97 4.41
2044 2070 4.533707 TGGATGATGAAGTTCAGGTTCTCT 59.466 41.667 11.91 0.00 0.00 3.10
2051 2077 2.683768 AGTTCAGGTTCTCTGTGGTCT 58.316 47.619 0.00 0.00 43.76 3.85
2059 2085 3.241530 TCTGTGGTCTTGGCCGCT 61.242 61.111 6.38 0.00 39.62 5.52
2074 2101 2.125673 GCTACGGCCTTTCGCTCA 60.126 61.111 0.00 0.00 37.74 4.26
2092 2119 5.986741 TCGCTCACAAAGTTGTTGTAGATTA 59.013 36.000 0.00 0.00 39.91 1.75
2093 2120 6.071463 CGCTCACAAAGTTGTTGTAGATTAC 58.929 40.000 0.00 0.00 39.91 1.89
2094 2121 6.073765 CGCTCACAAAGTTGTTGTAGATTACT 60.074 38.462 0.00 0.00 39.91 2.24
2095 2122 7.291567 GCTCACAAAGTTGTTGTAGATTACTC 58.708 38.462 0.00 0.00 39.91 2.59
2096 2123 7.571428 GCTCACAAAGTTGTTGTAGATTACTCC 60.571 40.741 0.00 0.00 39.91 3.85
2097 2124 6.708949 TCACAAAGTTGTTGTAGATTACTCCC 59.291 38.462 0.00 0.00 39.91 4.30
2098 2125 6.710744 CACAAAGTTGTTGTAGATTACTCCCT 59.289 38.462 0.00 0.00 39.91 4.20
2099 2126 6.935208 ACAAAGTTGTTGTAGATTACTCCCTC 59.065 38.462 0.00 0.00 38.47 4.30
2100 2127 6.936968 AAGTTGTTGTAGATTACTCCCTCT 57.063 37.500 0.00 0.00 0.00 3.69
2101 2128 6.287589 AGTTGTTGTAGATTACTCCCTCTG 57.712 41.667 0.00 0.00 0.00 3.35
2102 2129 5.780793 AGTTGTTGTAGATTACTCCCTCTGT 59.219 40.000 0.00 0.00 0.00 3.41
2103 2130 5.916661 TGTTGTAGATTACTCCCTCTGTC 57.083 43.478 0.00 0.00 0.00 3.51
2104 2131 4.710375 TGTTGTAGATTACTCCCTCTGTCC 59.290 45.833 0.00 0.00 0.00 4.02
2105 2132 3.912248 TGTAGATTACTCCCTCTGTCCC 58.088 50.000 0.00 0.00 0.00 4.46
2106 2133 3.271225 TGTAGATTACTCCCTCTGTCCCA 59.729 47.826 0.00 0.00 0.00 4.37
2107 2134 3.715648 AGATTACTCCCTCTGTCCCAT 57.284 47.619 0.00 0.00 0.00 4.00
2108 2135 4.834406 AGATTACTCCCTCTGTCCCATA 57.166 45.455 0.00 0.00 0.00 2.74
2109 2136 5.157770 AGATTACTCCCTCTGTCCCATAA 57.842 43.478 0.00 0.00 0.00 1.90
2110 2137 5.731924 AGATTACTCCCTCTGTCCCATAAT 58.268 41.667 0.00 0.00 0.00 1.28
2111 2138 6.875469 AGATTACTCCCTCTGTCCCATAATA 58.125 40.000 0.00 0.00 0.00 0.98
2112 2139 7.491681 AGATTACTCCCTCTGTCCCATAATAT 58.508 38.462 0.00 0.00 0.00 1.28
2113 2140 8.633724 AGATTACTCCCTCTGTCCCATAATATA 58.366 37.037 0.00 0.00 0.00 0.86
2114 2141 9.268282 GATTACTCCCTCTGTCCCATAATATAA 57.732 37.037 0.00 0.00 0.00 0.98
2115 2142 8.666129 TTACTCCCTCTGTCCCATAATATAAG 57.334 38.462 0.00 0.00 0.00 1.73
2116 2143 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2117 2144 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2118 2145 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2119 2146 5.394663 CCCTCTGTCCCATAATATAAGAGCG 60.395 48.000 0.00 0.00 0.00 5.03
2120 2147 5.186021 CCTCTGTCCCATAATATAAGAGCGT 59.814 44.000 0.00 0.00 0.00 5.07
2121 2148 6.295349 CCTCTGTCCCATAATATAAGAGCGTT 60.295 42.308 0.00 0.00 0.00 4.84
2122 2149 7.062749 TCTGTCCCATAATATAAGAGCGTTT 57.937 36.000 0.00 0.00 0.00 3.60
2123 2150 7.152645 TCTGTCCCATAATATAAGAGCGTTTC 58.847 38.462 0.00 0.00 0.00 2.78
2124 2151 7.015292 TCTGTCCCATAATATAAGAGCGTTTCT 59.985 37.037 0.00 0.00 37.93 2.52
2125 2152 6.929049 TGTCCCATAATATAAGAGCGTTTCTG 59.071 38.462 0.00 0.00 35.91 3.02
2126 2153 7.152645 GTCCCATAATATAAGAGCGTTTCTGA 58.847 38.462 0.00 0.00 35.91 3.27
2127 2154 7.116519 GTCCCATAATATAAGAGCGTTTCTGAC 59.883 40.741 0.00 0.00 35.91 3.51
2128 2155 6.369065 CCCATAATATAAGAGCGTTTCTGACC 59.631 42.308 0.00 0.00 35.91 4.02
2129 2156 7.155328 CCATAATATAAGAGCGTTTCTGACCT 58.845 38.462 0.00 0.00 35.91 3.85
2130 2157 8.304596 CCATAATATAAGAGCGTTTCTGACCTA 58.695 37.037 0.00 0.00 35.91 3.08
2131 2158 9.130312 CATAATATAAGAGCGTTTCTGACCTAC 57.870 37.037 0.00 0.00 35.91 3.18
2132 2159 6.710597 ATATAAGAGCGTTTCTGACCTACA 57.289 37.500 0.00 0.00 35.91 2.74
2133 2160 2.726832 AGAGCGTTTCTGACCTACAC 57.273 50.000 0.00 0.00 33.93 2.90
2134 2161 2.240279 AGAGCGTTTCTGACCTACACT 58.760 47.619 0.00 0.00 33.93 3.55
2135 2162 3.418995 AGAGCGTTTCTGACCTACACTA 58.581 45.455 0.00 0.00 33.93 2.74
2136 2163 3.440872 AGAGCGTTTCTGACCTACACTAG 59.559 47.826 0.00 0.00 33.93 2.57
2137 2164 3.155501 AGCGTTTCTGACCTACACTAGT 58.844 45.455 0.00 0.00 0.00 2.57
2138 2165 3.057456 AGCGTTTCTGACCTACACTAGTG 60.057 47.826 21.44 21.44 0.00 2.74
2139 2166 3.305199 GCGTTTCTGACCTACACTAGTGT 60.305 47.826 30.13 30.13 46.87 3.55
2140 2167 4.083110 GCGTTTCTGACCTACACTAGTGTA 60.083 45.833 29.21 29.21 44.42 2.90
2141 2168 5.563475 GCGTTTCTGACCTACACTAGTGTAA 60.563 44.000 30.31 17.97 44.47 2.41
2142 2169 6.441274 CGTTTCTGACCTACACTAGTGTAAA 58.559 40.000 30.31 20.84 44.47 2.01
2143 2170 6.919662 CGTTTCTGACCTACACTAGTGTAAAA 59.080 38.462 30.31 23.62 44.47 1.52
2144 2171 7.096312 CGTTTCTGACCTACACTAGTGTAAAAC 60.096 40.741 28.79 28.79 44.47 2.43
2145 2172 7.592885 TTCTGACCTACACTAGTGTAAAACT 57.407 36.000 30.31 16.06 44.47 2.66
2146 2173 8.696043 TTCTGACCTACACTAGTGTAAAACTA 57.304 34.615 30.31 17.33 44.47 2.24
2177 2204 7.900782 AAAACGATCTTATATTATGGGACGG 57.099 36.000 0.00 0.00 0.00 4.79
2178 2205 6.845758 AACGATCTTATATTATGGGACGGA 57.154 37.500 0.00 0.00 0.00 4.69
2179 2206 6.452494 ACGATCTTATATTATGGGACGGAG 57.548 41.667 0.00 0.00 0.00 4.63
2180 2207 5.360144 ACGATCTTATATTATGGGACGGAGG 59.640 44.000 0.00 0.00 0.00 4.30
2181 2208 5.221263 CGATCTTATATTATGGGACGGAGGG 60.221 48.000 0.00 0.00 0.00 4.30
2182 2209 4.359105 TCTTATATTATGGGACGGAGGGG 58.641 47.826 0.00 0.00 0.00 4.79
2183 2210 2.735259 ATATTATGGGACGGAGGGGT 57.265 50.000 0.00 0.00 0.00 4.95
2184 2211 3.858696 ATATTATGGGACGGAGGGGTA 57.141 47.619 0.00 0.00 0.00 3.69
2185 2212 2.500269 ATTATGGGACGGAGGGGTAA 57.500 50.000 0.00 0.00 0.00 2.85
2186 2213 2.500269 TTATGGGACGGAGGGGTAAT 57.500 50.000 0.00 0.00 0.00 1.89
2187 2214 1.724545 TATGGGACGGAGGGGTAATG 58.275 55.000 0.00 0.00 0.00 1.90
2188 2215 1.060163 ATGGGACGGAGGGGTAATGG 61.060 60.000 0.00 0.00 0.00 3.16
2189 2216 1.383525 GGGACGGAGGGGTAATGGA 60.384 63.158 0.00 0.00 0.00 3.41
2190 2217 0.767060 GGGACGGAGGGGTAATGGAT 60.767 60.000 0.00 0.00 0.00 3.41
2191 2218 1.137697 GGACGGAGGGGTAATGGATT 58.862 55.000 0.00 0.00 0.00 3.01
2192 2219 1.493446 GGACGGAGGGGTAATGGATTT 59.507 52.381 0.00 0.00 0.00 2.17
2193 2220 2.572290 GACGGAGGGGTAATGGATTTG 58.428 52.381 0.00 0.00 0.00 2.32
2194 2221 1.214424 ACGGAGGGGTAATGGATTTGG 59.786 52.381 0.00 0.00 0.00 3.28
2195 2222 1.214424 CGGAGGGGTAATGGATTTGGT 59.786 52.381 0.00 0.00 0.00 3.67
2196 2223 2.357777 CGGAGGGGTAATGGATTTGGTT 60.358 50.000 0.00 0.00 0.00 3.67
2197 2224 3.296854 GGAGGGGTAATGGATTTGGTTC 58.703 50.000 0.00 0.00 0.00 3.62
2198 2225 3.052869 GGAGGGGTAATGGATTTGGTTCT 60.053 47.826 0.00 0.00 0.00 3.01
2199 2226 4.207955 GAGGGGTAATGGATTTGGTTCTC 58.792 47.826 0.00 0.00 0.00 2.87
2200 2227 3.052869 AGGGGTAATGGATTTGGTTCTCC 60.053 47.826 0.00 0.00 0.00 3.71
2201 2228 2.949644 GGGTAATGGATTTGGTTCTCCG 59.050 50.000 0.00 0.00 34.05 4.63
2202 2229 2.949644 GGTAATGGATTTGGTTCTCCGG 59.050 50.000 0.00 0.00 34.05 5.14
2203 2230 2.899303 AATGGATTTGGTTCTCCGGT 57.101 45.000 0.00 0.00 34.05 5.28
2204 2231 4.384427 GGTAATGGATTTGGTTCTCCGGTA 60.384 45.833 0.00 0.00 34.05 4.02
2205 2232 3.560636 ATGGATTTGGTTCTCCGGTAG 57.439 47.619 0.00 0.00 34.05 3.18
2206 2233 1.065709 TGGATTTGGTTCTCCGGTAGC 60.066 52.381 0.00 0.00 34.05 3.58
2207 2234 1.664873 GATTTGGTTCTCCGGTAGCC 58.335 55.000 0.00 3.20 36.30 3.93
2218 2245 3.630204 GGTAGCCGATGATGTGCG 58.370 61.111 0.00 0.00 0.00 5.34
2219 2246 1.067416 GGTAGCCGATGATGTGCGA 59.933 57.895 0.00 0.00 0.00 5.10
2220 2247 0.941463 GGTAGCCGATGATGTGCGAG 60.941 60.000 0.00 0.00 0.00 5.03
2221 2248 0.941463 GTAGCCGATGATGTGCGAGG 60.941 60.000 0.00 0.00 0.00 4.63
2222 2249 1.391933 TAGCCGATGATGTGCGAGGT 61.392 55.000 0.00 0.00 0.00 3.85
2223 2250 2.528743 GCCGATGATGTGCGAGGTG 61.529 63.158 0.00 0.00 0.00 4.00
2224 2251 1.141665 CCGATGATGTGCGAGGTGA 59.858 57.895 0.00 0.00 0.00 4.02
2225 2252 0.873312 CCGATGATGTGCGAGGTGAG 60.873 60.000 0.00 0.00 0.00 3.51
2226 2253 0.179127 CGATGATGTGCGAGGTGAGT 60.179 55.000 0.00 0.00 0.00 3.41
2227 2254 1.284657 GATGATGTGCGAGGTGAGTG 58.715 55.000 0.00 0.00 0.00 3.51
2228 2255 0.897621 ATGATGTGCGAGGTGAGTGA 59.102 50.000 0.00 0.00 0.00 3.41
2229 2256 0.244721 TGATGTGCGAGGTGAGTGAG 59.755 55.000 0.00 0.00 0.00 3.51
2230 2257 0.244994 GATGTGCGAGGTGAGTGAGT 59.755 55.000 0.00 0.00 0.00 3.41
2231 2258 0.681733 ATGTGCGAGGTGAGTGAGTT 59.318 50.000 0.00 0.00 0.00 3.01
2232 2259 0.464036 TGTGCGAGGTGAGTGAGTTT 59.536 50.000 0.00 0.00 0.00 2.66
2233 2260 0.861837 GTGCGAGGTGAGTGAGTTTG 59.138 55.000 0.00 0.00 0.00 2.93
2234 2261 0.464036 TGCGAGGTGAGTGAGTTTGT 59.536 50.000 0.00 0.00 0.00 2.83
2235 2262 1.684450 TGCGAGGTGAGTGAGTTTGTA 59.316 47.619 0.00 0.00 0.00 2.41
2236 2263 2.059541 GCGAGGTGAGTGAGTTTGTAC 58.940 52.381 0.00 0.00 0.00 2.90
2237 2264 2.673833 CGAGGTGAGTGAGTTTGTACC 58.326 52.381 0.00 0.00 0.00 3.34
2238 2265 2.035449 CGAGGTGAGTGAGTTTGTACCA 59.965 50.000 0.00 0.00 0.00 3.25
2239 2266 3.391049 GAGGTGAGTGAGTTTGTACCAC 58.609 50.000 0.00 0.00 0.00 4.16
2240 2267 3.039011 AGGTGAGTGAGTTTGTACCACT 58.961 45.455 1.87 1.87 38.02 4.00
2241 2268 3.131396 GGTGAGTGAGTTTGTACCACTG 58.869 50.000 6.47 0.00 36.53 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.969250 GAAGGAACGATGGCGCCCA 62.969 63.158 26.77 12.96 42.48 5.36
1 2 3.202706 GAAGGAACGATGGCGCCC 61.203 66.667 26.77 8.57 42.48 6.13
2 3 3.202706 GGAAGGAACGATGGCGCC 61.203 66.667 22.73 22.73 42.48 6.53
3 4 2.125106 AGGAAGGAACGATGGCGC 60.125 61.111 0.00 0.00 42.48 6.53
4 5 0.391130 TTCAGGAAGGAACGATGGCG 60.391 55.000 0.00 0.00 44.79 5.69
5 6 1.373570 CTTCAGGAAGGAACGATGGC 58.626 55.000 1.01 0.00 34.87 4.40
15 16 1.078143 CCCGAAGCCCTTCAGGAAG 60.078 63.158 15.56 2.01 39.01 3.46
16 17 0.545787 TACCCGAAGCCCTTCAGGAA 60.546 55.000 15.35 4.46 39.01 3.36
17 18 0.326238 ATACCCGAAGCCCTTCAGGA 60.326 55.000 15.35 0.72 39.01 3.86
18 19 1.420430 TATACCCGAAGCCCTTCAGG 58.580 55.000 8.41 8.41 41.68 3.86
19 20 2.484947 GGTTATACCCGAAGCCCTTCAG 60.485 54.545 8.58 2.02 39.46 3.02
20 21 1.487558 GGTTATACCCGAAGCCCTTCA 59.512 52.381 8.58 0.00 39.46 3.02
21 22 2.251409 GGTTATACCCGAAGCCCTTC 57.749 55.000 0.00 0.00 36.29 3.46
32 33 2.047830 CAGTGAGGAGGGGGTTATACC 58.952 57.143 0.00 0.00 37.60 2.73
33 34 1.416772 GCAGTGAGGAGGGGGTTATAC 59.583 57.143 0.00 0.00 0.00 1.47
34 35 1.694693 GGCAGTGAGGAGGGGGTTATA 60.695 57.143 0.00 0.00 0.00 0.98
35 36 0.988678 GGCAGTGAGGAGGGGGTTAT 60.989 60.000 0.00 0.00 0.00 1.89
36 37 1.615424 GGCAGTGAGGAGGGGGTTA 60.615 63.158 0.00 0.00 0.00 2.85
37 38 2.936032 GGCAGTGAGGAGGGGGTT 60.936 66.667 0.00 0.00 0.00 4.11
39 40 4.748798 AGGGCAGTGAGGAGGGGG 62.749 72.222 0.00 0.00 0.00 5.40
40 41 2.612115 AAGGGCAGTGAGGAGGGG 60.612 66.667 0.00 0.00 0.00 4.79
41 42 2.993853 GAAGGGCAGTGAGGAGGG 59.006 66.667 0.00 0.00 0.00 4.30
42 43 2.581354 CGAAGGGCAGTGAGGAGG 59.419 66.667 0.00 0.00 0.00 4.30
43 44 2.125350 GCGAAGGGCAGTGAGGAG 60.125 66.667 0.00 0.00 42.87 3.69
67 68 2.007608 GACAAGTCATAGGGTTTCGCC 58.992 52.381 0.00 0.00 0.00 5.54
68 69 2.007608 GGACAAGTCATAGGGTTTCGC 58.992 52.381 2.29 0.00 0.00 4.70
69 70 2.268298 CGGACAAGTCATAGGGTTTCG 58.732 52.381 2.29 0.00 0.00 3.46
70 71 2.629051 CCGGACAAGTCATAGGGTTTC 58.371 52.381 0.00 0.00 0.00 2.78
71 72 1.280998 CCCGGACAAGTCATAGGGTTT 59.719 52.381 0.73 0.00 36.36 3.27
72 73 0.909623 CCCGGACAAGTCATAGGGTT 59.090 55.000 0.73 0.00 36.36 4.11
73 74 1.623542 GCCCGGACAAGTCATAGGGT 61.624 60.000 20.74 0.00 40.25 4.34
74 75 1.146263 GCCCGGACAAGTCATAGGG 59.854 63.158 0.73 17.65 40.71 3.53
75 76 0.251916 TTGCCCGGACAAGTCATAGG 59.748 55.000 0.73 2.62 0.00 2.57
76 77 1.369625 GTTGCCCGGACAAGTCATAG 58.630 55.000 2.31 0.00 0.00 2.23
77 78 0.390603 CGTTGCCCGGACAAGTCATA 60.391 55.000 2.31 0.00 0.00 2.15
78 79 1.671054 CGTTGCCCGGACAAGTCAT 60.671 57.895 2.31 0.00 0.00 3.06
79 80 2.280524 CGTTGCCCGGACAAGTCA 60.281 61.111 2.31 0.00 0.00 3.41
91 92 1.766143 GACGATGATGAGGCCGTTGC 61.766 60.000 0.00 0.00 35.22 4.17
92 93 1.482621 CGACGATGATGAGGCCGTTG 61.483 60.000 0.00 0.00 35.22 4.10
93 94 1.226974 CGACGATGATGAGGCCGTT 60.227 57.895 0.00 0.00 35.22 4.44
94 95 2.413351 CGACGATGATGAGGCCGT 59.587 61.111 0.00 0.00 38.01 5.68
95 96 2.960957 AAGCGACGATGATGAGGCCG 62.961 60.000 0.00 0.00 0.00 6.13
96 97 0.811616 AAAGCGACGATGATGAGGCC 60.812 55.000 0.00 0.00 0.00 5.19
97 98 0.579156 GAAAGCGACGATGATGAGGC 59.421 55.000 0.00 0.00 0.00 4.70
98 99 1.202463 AGGAAAGCGACGATGATGAGG 60.202 52.381 0.00 0.00 0.00 3.86
99 100 2.215907 AGGAAAGCGACGATGATGAG 57.784 50.000 0.00 0.00 0.00 2.90
100 101 2.166459 AGAAGGAAAGCGACGATGATGA 59.834 45.455 0.00 0.00 0.00 2.92
101 102 2.544685 AGAAGGAAAGCGACGATGATG 58.455 47.619 0.00 0.00 0.00 3.07
102 103 2.932614 CAAGAAGGAAAGCGACGATGAT 59.067 45.455 0.00 0.00 0.00 2.45
103 104 2.029380 TCAAGAAGGAAAGCGACGATGA 60.029 45.455 0.00 0.00 0.00 2.92
104 105 2.337583 TCAAGAAGGAAAGCGACGATG 58.662 47.619 0.00 0.00 0.00 3.84
105 106 2.743636 TCAAGAAGGAAAGCGACGAT 57.256 45.000 0.00 0.00 0.00 3.73
106 107 2.404215 CTTCAAGAAGGAAAGCGACGA 58.596 47.619 0.00 0.00 34.87 4.20
107 108 2.863658 CTTCAAGAAGGAAAGCGACG 57.136 50.000 1.86 0.00 34.87 5.12
117 118 3.209410 ACTGAGCAACACCTTCAAGAAG 58.791 45.455 2.83 2.83 38.14 2.85
118 119 3.281727 ACTGAGCAACACCTTCAAGAA 57.718 42.857 0.00 0.00 0.00 2.52
119 120 3.728845 GTACTGAGCAACACCTTCAAGA 58.271 45.455 0.00 0.00 0.00 3.02
120 121 2.476619 CGTACTGAGCAACACCTTCAAG 59.523 50.000 0.00 0.00 0.00 3.02
121 122 2.479837 CGTACTGAGCAACACCTTCAA 58.520 47.619 0.00 0.00 0.00 2.69
122 123 1.872237 GCGTACTGAGCAACACCTTCA 60.872 52.381 0.00 0.00 34.19 3.02
123 124 0.790814 GCGTACTGAGCAACACCTTC 59.209 55.000 0.00 0.00 34.19 3.46
124 125 0.105964 TGCGTACTGAGCAACACCTT 59.894 50.000 0.00 0.00 42.18 3.50
125 126 1.745890 TGCGTACTGAGCAACACCT 59.254 52.632 0.00 0.00 42.18 4.00
126 127 4.354155 TGCGTACTGAGCAACACC 57.646 55.556 0.00 0.00 42.18 4.16
131 132 1.282248 GAAGCGTTGCGTACTGAGCA 61.282 55.000 0.00 0.00 43.59 4.26
132 133 1.282248 TGAAGCGTTGCGTACTGAGC 61.282 55.000 0.00 0.00 0.00 4.26
133 134 0.710567 CTGAAGCGTTGCGTACTGAG 59.289 55.000 0.00 0.00 0.00 3.35
134 135 0.031585 ACTGAAGCGTTGCGTACTGA 59.968 50.000 0.00 0.00 0.00 3.41
135 136 0.161658 CACTGAAGCGTTGCGTACTG 59.838 55.000 0.00 0.00 0.00 2.74
136 137 0.249322 ACACTGAAGCGTTGCGTACT 60.249 50.000 0.00 0.00 0.00 2.73
137 138 0.111266 CACACTGAAGCGTTGCGTAC 60.111 55.000 0.00 0.00 0.00 3.67
138 139 1.827315 GCACACTGAAGCGTTGCGTA 61.827 55.000 0.00 0.00 0.00 4.42
139 140 3.014036 CACACTGAAGCGTTGCGT 58.986 55.556 0.00 0.00 0.00 5.24
140 141 2.378945 AAGCACACTGAAGCGTTGCG 62.379 55.000 0.00 0.00 35.48 4.85
141 142 0.931662 CAAGCACACTGAAGCGTTGC 60.932 55.000 0.00 0.00 35.48 4.17
142 143 0.317269 CCAAGCACACTGAAGCGTTG 60.317 55.000 0.00 0.00 35.48 4.10
143 144 2.024918 CCAAGCACACTGAAGCGTT 58.975 52.632 0.00 0.00 35.48 4.84
144 145 2.546494 GCCAAGCACACTGAAGCGT 61.546 57.895 0.00 0.00 35.48 5.07
145 146 2.253452 GCCAAGCACACTGAAGCG 59.747 61.111 0.00 0.00 35.48 4.68
146 147 2.253452 CGCCAAGCACACTGAAGC 59.747 61.111 0.00 0.00 0.00 3.86
147 148 1.280746 CACGCCAAGCACACTGAAG 59.719 57.895 0.00 0.00 0.00 3.02
148 149 1.451207 ACACGCCAAGCACACTGAA 60.451 52.632 0.00 0.00 0.00 3.02
149 150 2.179547 CACACGCCAAGCACACTGA 61.180 57.895 0.00 0.00 0.00 3.41
150 151 2.328989 CACACGCCAAGCACACTG 59.671 61.111 0.00 0.00 0.00 3.66
151 152 2.901840 CCACACGCCAAGCACACT 60.902 61.111 0.00 0.00 0.00 3.55
152 153 3.209097 ACCACACGCCAAGCACAC 61.209 61.111 0.00 0.00 0.00 3.82
153 154 3.208383 CACCACACGCCAAGCACA 61.208 61.111 0.00 0.00 0.00 4.57
154 155 3.964875 CCACCACACGCCAAGCAC 61.965 66.667 0.00 0.00 0.00 4.40
155 156 2.610532 TTACCACCACACGCCAAGCA 62.611 55.000 0.00 0.00 0.00 3.91
156 157 1.448922 TTTACCACCACACGCCAAGC 61.449 55.000 0.00 0.00 0.00 4.01
157 158 1.199097 GATTTACCACCACACGCCAAG 59.801 52.381 0.00 0.00 0.00 3.61
158 159 1.202830 AGATTTACCACCACACGCCAA 60.203 47.619 0.00 0.00 0.00 4.52
159 160 0.398696 AGATTTACCACCACACGCCA 59.601 50.000 0.00 0.00 0.00 5.69
160 161 1.084289 GAGATTTACCACCACACGCC 58.916 55.000 0.00 0.00 0.00 5.68
161 162 1.084289 GGAGATTTACCACCACACGC 58.916 55.000 0.00 0.00 0.00 5.34
162 163 1.355971 CGGAGATTTACCACCACACG 58.644 55.000 0.00 0.00 0.00 4.49
163 164 1.677820 CCCGGAGATTTACCACCACAC 60.678 57.143 0.73 0.00 0.00 3.82
164 165 0.616371 CCCGGAGATTTACCACCACA 59.384 55.000 0.73 0.00 0.00 4.17
165 166 0.107361 CCCCGGAGATTTACCACCAC 60.107 60.000 0.73 0.00 0.00 4.16
166 167 1.276140 CCCCCGGAGATTTACCACCA 61.276 60.000 0.73 0.00 0.00 4.17
167 168 1.530283 CCCCCGGAGATTTACCACC 59.470 63.158 0.73 0.00 0.00 4.61
193 194 3.202706 GAAACCGGGAGCCATCGC 61.203 66.667 6.32 0.00 35.11 4.58
194 195 1.078426 AAGAAACCGGGAGCCATCG 60.078 57.895 6.32 0.00 0.00 3.84
195 196 0.253327 AGAAGAAACCGGGAGCCATC 59.747 55.000 6.32 0.00 0.00 3.51
196 197 0.698818 AAGAAGAAACCGGGAGCCAT 59.301 50.000 6.32 0.00 0.00 4.40
197 198 0.036306 GAAGAAGAAACCGGGAGCCA 59.964 55.000 6.32 0.00 0.00 4.75
198 199 1.019805 CGAAGAAGAAACCGGGAGCC 61.020 60.000 6.32 0.00 0.00 4.70
199 200 0.320508 ACGAAGAAGAAACCGGGAGC 60.321 55.000 6.32 0.00 0.00 4.70
200 201 2.165319 AACGAAGAAGAAACCGGGAG 57.835 50.000 6.32 0.00 0.00 4.30
201 202 2.486918 GAAACGAAGAAGAAACCGGGA 58.513 47.619 6.32 0.00 0.00 5.14
202 203 1.193874 CGAAACGAAGAAGAAACCGGG 59.806 52.381 6.32 0.00 0.00 5.73
203 204 1.862827 ACGAAACGAAGAAGAAACCGG 59.137 47.619 0.00 0.00 0.00 5.28
204 205 3.580794 AACGAAACGAAGAAGAAACCG 57.419 42.857 0.00 0.00 0.00 4.44
205 206 4.902448 GCTTAACGAAACGAAGAAGAAACC 59.098 41.667 0.00 0.00 0.00 3.27
206 207 5.615982 CAGCTTAACGAAACGAAGAAGAAAC 59.384 40.000 0.00 0.00 0.00 2.78
207 208 5.734311 CAGCTTAACGAAACGAAGAAGAAA 58.266 37.500 0.00 0.00 0.00 2.52
208 209 4.318546 GCAGCTTAACGAAACGAAGAAGAA 60.319 41.667 0.00 0.00 0.00 2.52
209 210 3.183775 GCAGCTTAACGAAACGAAGAAGA 59.816 43.478 0.00 0.00 0.00 2.87
210 211 3.470562 GCAGCTTAACGAAACGAAGAAG 58.529 45.455 0.00 0.00 0.00 2.85
211 212 2.222445 GGCAGCTTAACGAAACGAAGAA 59.778 45.455 0.00 0.00 0.00 2.52
212 213 1.796459 GGCAGCTTAACGAAACGAAGA 59.204 47.619 0.00 0.00 0.00 2.87
213 214 1.461888 CGGCAGCTTAACGAAACGAAG 60.462 52.381 0.00 0.00 0.00 3.79
214 215 0.509499 CGGCAGCTTAACGAAACGAA 59.491 50.000 0.00 0.00 0.00 3.85
215 216 1.286354 CCGGCAGCTTAACGAAACGA 61.286 55.000 0.00 0.00 0.00 3.85
216 217 1.131826 CCGGCAGCTTAACGAAACG 59.868 57.895 0.00 0.00 0.00 3.60
217 218 0.110373 CACCGGCAGCTTAACGAAAC 60.110 55.000 0.00 0.00 0.00 2.78
218 219 0.533308 ACACCGGCAGCTTAACGAAA 60.533 50.000 0.00 0.00 0.00 3.46
219 220 0.947180 GACACCGGCAGCTTAACGAA 60.947 55.000 0.00 0.00 0.00 3.85
220 221 1.373748 GACACCGGCAGCTTAACGA 60.374 57.895 0.00 0.00 0.00 3.85
221 222 2.726691 CGACACCGGCAGCTTAACG 61.727 63.158 0.00 0.00 0.00 3.18
222 223 3.165498 CGACACCGGCAGCTTAAC 58.835 61.111 0.00 0.00 0.00 2.01
232 233 0.591170 AGAAACAAATGCCGACACCG 59.409 50.000 0.00 0.00 0.00 4.94
233 234 1.880027 AGAGAAACAAATGCCGACACC 59.120 47.619 0.00 0.00 0.00 4.16
234 235 3.626028 AAGAGAAACAAATGCCGACAC 57.374 42.857 0.00 0.00 0.00 3.67
235 236 4.142271 ACAAAAGAGAAACAAATGCCGACA 60.142 37.500 0.00 0.00 0.00 4.35
236 237 4.359706 ACAAAAGAGAAACAAATGCCGAC 58.640 39.130 0.00 0.00 0.00 4.79
237 238 4.338118 AGACAAAAGAGAAACAAATGCCGA 59.662 37.500 0.00 0.00 0.00 5.54
238 239 4.610945 AGACAAAAGAGAAACAAATGCCG 58.389 39.130 0.00 0.00 0.00 5.69
239 240 5.812127 ACAAGACAAAAGAGAAACAAATGCC 59.188 36.000 0.00 0.00 0.00 4.40
240 241 6.892310 ACAAGACAAAAGAGAAACAAATGC 57.108 33.333 0.00 0.00 0.00 3.56
241 242 8.243289 ACAACAAGACAAAAGAGAAACAAATG 57.757 30.769 0.00 0.00 0.00 2.32
242 243 8.831715 AACAACAAGACAAAAGAGAAACAAAT 57.168 26.923 0.00 0.00 0.00 2.32
243 244 8.655651 AAACAACAAGACAAAAGAGAAACAAA 57.344 26.923 0.00 0.00 0.00 2.83
244 245 8.655651 AAAACAACAAGACAAAAGAGAAACAA 57.344 26.923 0.00 0.00 0.00 2.83
245 246 8.141268 AGAAAACAACAAGACAAAAGAGAAACA 58.859 29.630 0.00 0.00 0.00 2.83
246 247 8.520835 AGAAAACAACAAGACAAAAGAGAAAC 57.479 30.769 0.00 0.00 0.00 2.78
247 248 9.541143 AAAGAAAACAACAAGACAAAAGAGAAA 57.459 25.926 0.00 0.00 0.00 2.52
248 249 8.977505 CAAAGAAAACAACAAGACAAAAGAGAA 58.022 29.630 0.00 0.00 0.00 2.87
249 250 7.598493 CCAAAGAAAACAACAAGACAAAAGAGA 59.402 33.333 0.00 0.00 0.00 3.10
250 251 7.148590 CCCAAAGAAAACAACAAGACAAAAGAG 60.149 37.037 0.00 0.00 0.00 2.85
251 252 6.648725 CCCAAAGAAAACAACAAGACAAAAGA 59.351 34.615 0.00 0.00 0.00 2.52
252 253 6.620518 GCCCAAAGAAAACAACAAGACAAAAG 60.621 38.462 0.00 0.00 0.00 2.27
253 254 5.180304 GCCCAAAGAAAACAACAAGACAAAA 59.820 36.000 0.00 0.00 0.00 2.44
254 255 4.693095 GCCCAAAGAAAACAACAAGACAAA 59.307 37.500 0.00 0.00 0.00 2.83
255 256 4.020662 AGCCCAAAGAAAACAACAAGACAA 60.021 37.500 0.00 0.00 0.00 3.18
256 257 3.513515 AGCCCAAAGAAAACAACAAGACA 59.486 39.130 0.00 0.00 0.00 3.41
257 258 4.123497 AGCCCAAAGAAAACAACAAGAC 57.877 40.909 0.00 0.00 0.00 3.01
258 259 4.502962 CAAGCCCAAAGAAAACAACAAGA 58.497 39.130 0.00 0.00 0.00 3.02
259 260 3.622612 CCAAGCCCAAAGAAAACAACAAG 59.377 43.478 0.00 0.00 0.00 3.16
260 261 3.008485 ACCAAGCCCAAAGAAAACAACAA 59.992 39.130 0.00 0.00 0.00 2.83
261 262 2.569404 ACCAAGCCCAAAGAAAACAACA 59.431 40.909 0.00 0.00 0.00 3.33
262 263 3.260475 ACCAAGCCCAAAGAAAACAAC 57.740 42.857 0.00 0.00 0.00 3.32
263 264 3.008485 ACAACCAAGCCCAAAGAAAACAA 59.992 39.130 0.00 0.00 0.00 2.83
264 265 2.569404 ACAACCAAGCCCAAAGAAAACA 59.431 40.909 0.00 0.00 0.00 2.83
265 266 2.935849 CACAACCAAGCCCAAAGAAAAC 59.064 45.455 0.00 0.00 0.00 2.43
266 267 2.679349 GCACAACCAAGCCCAAAGAAAA 60.679 45.455 0.00 0.00 0.00 2.29
267 268 1.134551 GCACAACCAAGCCCAAAGAAA 60.135 47.619 0.00 0.00 0.00 2.52
268 269 0.463620 GCACAACCAAGCCCAAAGAA 59.536 50.000 0.00 0.00 0.00 2.52
269 270 0.396974 AGCACAACCAAGCCCAAAGA 60.397 50.000 0.00 0.00 0.00 2.52
270 271 0.249573 CAGCACAACCAAGCCCAAAG 60.250 55.000 0.00 0.00 0.00 2.77
271 272 1.821936 CAGCACAACCAAGCCCAAA 59.178 52.632 0.00 0.00 0.00 3.28
272 273 2.795110 GCAGCACAACCAAGCCCAA 61.795 57.895 0.00 0.00 0.00 4.12
273 274 3.225798 GCAGCACAACCAAGCCCA 61.226 61.111 0.00 0.00 0.00 5.36
274 275 4.347453 CGCAGCACAACCAAGCCC 62.347 66.667 0.00 0.00 0.00 5.19
275 276 4.347453 CCGCAGCACAACCAAGCC 62.347 66.667 0.00 0.00 0.00 4.35
277 278 4.347453 GGCCGCAGCACAACCAAG 62.347 66.667 0.00 0.00 42.56 3.61
291 292 2.604382 AACCAACATGCTGGGGCC 60.604 61.111 19.15 0.00 41.16 5.80
292 293 0.897863 TACAACCAACATGCTGGGGC 60.898 55.000 19.15 0.00 41.16 5.80
293 294 1.750778 GATACAACCAACATGCTGGGG 59.249 52.381 19.15 12.78 41.16 4.96
294 295 2.726821 AGATACAACCAACATGCTGGG 58.273 47.619 19.15 8.12 41.16 4.45
295 296 3.507233 ACAAGATACAACCAACATGCTGG 59.493 43.478 13.73 13.73 42.68 4.85
296 297 4.478699 CACAAGATACAACCAACATGCTG 58.521 43.478 0.00 0.00 0.00 4.41
297 298 3.507233 CCACAAGATACAACCAACATGCT 59.493 43.478 0.00 0.00 0.00 3.79
298 299 3.255642 ACCACAAGATACAACCAACATGC 59.744 43.478 0.00 0.00 0.00 4.06
299 300 4.321156 CCACCACAAGATACAACCAACATG 60.321 45.833 0.00 0.00 0.00 3.21
300 301 3.826157 CCACCACAAGATACAACCAACAT 59.174 43.478 0.00 0.00 0.00 2.71
301 302 3.218453 CCACCACAAGATACAACCAACA 58.782 45.455 0.00 0.00 0.00 3.33
302 303 2.030274 GCCACCACAAGATACAACCAAC 60.030 50.000 0.00 0.00 0.00 3.77
303 304 2.158534 AGCCACCACAAGATACAACCAA 60.159 45.455 0.00 0.00 0.00 3.67
304 305 1.423541 AGCCACCACAAGATACAACCA 59.576 47.619 0.00 0.00 0.00 3.67
305 306 2.200373 AGCCACCACAAGATACAACC 57.800 50.000 0.00 0.00 0.00 3.77
306 307 5.897377 ATAAAGCCACCACAAGATACAAC 57.103 39.130 0.00 0.00 0.00 3.32
307 308 9.860650 ATATTATAAAGCCACCACAAGATACAA 57.139 29.630 0.00 0.00 0.00 2.41
342 343 2.793288 TGGACGATAAAGGGTTTCCC 57.207 50.000 0.00 0.00 45.90 3.97
343 344 5.407502 CAAATTGGACGATAAAGGGTTTCC 58.592 41.667 0.00 0.00 0.00 3.13
344 345 5.184287 TCCAAATTGGACGATAAAGGGTTTC 59.816 40.000 11.23 0.00 42.67 2.78
345 346 5.081032 TCCAAATTGGACGATAAAGGGTTT 58.919 37.500 11.23 0.00 42.67 3.27
346 347 4.668636 TCCAAATTGGACGATAAAGGGTT 58.331 39.130 11.23 0.00 42.67 4.11
347 348 4.270008 CTCCAAATTGGACGATAAAGGGT 58.730 43.478 11.23 0.00 42.67 4.34
348 349 3.632145 CCTCCAAATTGGACGATAAAGGG 59.368 47.826 11.23 4.47 42.67 3.95
349 350 3.632145 CCCTCCAAATTGGACGATAAAGG 59.368 47.826 11.23 8.79 42.67 3.11
350 351 3.066760 GCCCTCCAAATTGGACGATAAAG 59.933 47.826 11.23 0.00 42.67 1.85
351 352 3.020984 GCCCTCCAAATTGGACGATAAA 58.979 45.455 11.23 0.00 42.67 1.40
352 353 2.025793 TGCCCTCCAAATTGGACGATAA 60.026 45.455 11.23 0.00 42.67 1.75
353 354 1.562008 TGCCCTCCAAATTGGACGATA 59.438 47.619 11.23 0.00 42.67 2.92
354 355 0.331278 TGCCCTCCAAATTGGACGAT 59.669 50.000 11.23 0.00 42.67 3.73
355 356 0.608035 GTGCCCTCCAAATTGGACGA 60.608 55.000 11.23 0.00 42.67 4.20
356 357 1.883021 GTGCCCTCCAAATTGGACG 59.117 57.895 11.23 7.33 42.67 4.79
357 358 1.883021 CGTGCCCTCCAAATTGGAC 59.117 57.895 11.23 2.27 42.67 4.02
358 359 1.976474 GCGTGCCCTCCAAATTGGA 60.976 57.895 14.73 14.73 45.98 3.53
359 360 2.216750 CTGCGTGCCCTCCAAATTGG 62.217 60.000 5.48 5.48 39.43 3.16
360 361 1.213537 CTGCGTGCCCTCCAAATTG 59.786 57.895 0.00 0.00 0.00 2.32
361 362 0.323725 ATCTGCGTGCCCTCCAAATT 60.324 50.000 0.00 0.00 0.00 1.82
362 363 1.033746 CATCTGCGTGCCCTCCAAAT 61.034 55.000 0.00 0.00 0.00 2.32
363 364 1.675310 CATCTGCGTGCCCTCCAAA 60.675 57.895 0.00 0.00 0.00 3.28
364 365 2.046023 CATCTGCGTGCCCTCCAA 60.046 61.111 0.00 0.00 0.00 3.53
365 366 3.002583 TCATCTGCGTGCCCTCCA 61.003 61.111 0.00 0.00 0.00 3.86
366 367 2.202987 CTCATCTGCGTGCCCTCC 60.203 66.667 0.00 0.00 0.00 4.30
367 368 2.202987 CCTCATCTGCGTGCCCTC 60.203 66.667 0.00 0.00 0.00 4.30
368 369 3.790437 CCCTCATCTGCGTGCCCT 61.790 66.667 0.00 0.00 0.00 5.19
369 370 4.864334 CCCCTCATCTGCGTGCCC 62.864 72.222 0.00 0.00 0.00 5.36
371 372 4.783621 TGCCCCTCATCTGCGTGC 62.784 66.667 0.00 0.00 0.00 5.34
372 373 2.821366 GTGCCCCTCATCTGCGTG 60.821 66.667 0.00 0.00 0.00 5.34
373 374 3.321648 TGTGCCCCTCATCTGCGT 61.322 61.111 0.00 0.00 0.00 5.24
374 375 2.821366 GTGTGCCCCTCATCTGCG 60.821 66.667 0.00 0.00 0.00 5.18
375 376 2.042831 GTGTGTGCCCCTCATCTGC 61.043 63.158 0.00 0.00 0.00 4.26
376 377 1.377725 GGTGTGTGCCCCTCATCTG 60.378 63.158 0.00 0.00 0.00 2.90
377 378 1.539869 AGGTGTGTGCCCCTCATCT 60.540 57.895 0.00 0.00 0.00 2.90
378 379 1.377725 CAGGTGTGTGCCCCTCATC 60.378 63.158 0.00 0.00 0.00 2.92
379 380 2.129555 GACAGGTGTGTGCCCCTCAT 62.130 60.000 0.00 0.00 36.88 2.90
380 381 2.772191 ACAGGTGTGTGCCCCTCA 60.772 61.111 0.00 0.00 34.75 3.86
381 382 2.032681 GACAGGTGTGTGCCCCTC 59.967 66.667 0.00 0.00 36.88 4.30
382 383 2.772191 TGACAGGTGTGTGCCCCT 60.772 61.111 0.00 0.00 36.88 4.79
383 384 2.281761 CTGACAGGTGTGTGCCCC 60.282 66.667 0.00 0.00 36.88 5.80
395 396 4.700365 CAGCCGACGCGACTGACA 62.700 66.667 15.93 0.00 39.58 3.58
439 441 0.807667 CTCTCGTGCGGGATCCAAAG 60.808 60.000 15.23 5.39 0.00 2.77
440 442 1.218047 CTCTCGTGCGGGATCCAAA 59.782 57.895 15.23 0.00 0.00 3.28
501 503 3.131396 GGAACCTATGACTGGCATAACG 58.869 50.000 4.51 0.53 38.92 3.18
505 507 1.496060 TCGGAACCTATGACTGGCAT 58.504 50.000 0.00 0.00 41.08 4.40
508 511 4.939052 AAGTATCGGAACCTATGACTGG 57.061 45.455 0.00 0.00 0.00 4.00
510 513 5.371526 TCGTAAGTATCGGAACCTATGACT 58.628 41.667 0.00 0.00 39.48 3.41
514 517 6.376978 CGAAATCGTAAGTATCGGAACCTAT 58.623 40.000 0.00 0.00 35.39 2.57
537 540 2.256158 TGGTACGAGCGACCAACG 59.744 61.111 10.32 0.00 44.08 4.10
540 543 0.390124 AAACTTGGTACGAGCGACCA 59.610 50.000 9.15 9.15 45.38 4.02
564 567 7.273381 CCTATGATCGACAAAAATGTTTCAACC 59.727 37.037 0.00 0.00 0.00 3.77
566 569 8.105097 TCCTATGATCGACAAAAATGTTTCAA 57.895 30.769 0.00 0.00 0.00 2.69
603 606 9.515020 CTTGATACAAACTACACACAAAATTGT 57.485 29.630 0.00 0.00 43.36 2.71
663 666 9.246670 TGAGATCCATTTTGAATACAGTTTGAT 57.753 29.630 0.00 0.00 0.00 2.57
669 672 8.146479 TCGAATGAGATCCATTTTGAATACAG 57.854 34.615 9.79 0.00 45.00 2.74
677 680 5.884792 AGAGCTTTCGAATGAGATCCATTTT 59.115 36.000 14.70 0.00 45.00 1.82
699 702 5.828299 AATTTGTTTTTCCTGTGACGAGA 57.172 34.783 0.00 0.00 0.00 4.04
700 703 7.979115 TTAAATTTGTTTTTCCTGTGACGAG 57.021 32.000 0.00 0.00 0.00 4.18
801 817 0.454600 TCATCGTCAGTTACCTCGGC 59.545 55.000 0.00 0.00 0.00 5.54
807 823 8.728088 AAACAATTGAATTCATCGTCAGTTAC 57.272 30.769 13.59 0.00 0.00 2.50
814 830 9.619316 TTATTTCGAAACAATTGAATTCATCGT 57.381 25.926 20.33 11.31 0.00 3.73
825 841 8.299570 AGCAGAGACATTTATTTCGAAACAATT 58.700 29.630 13.81 1.25 0.00 2.32
834 850 6.850555 AGAGCAAAGCAGAGACATTTATTTC 58.149 36.000 0.00 0.00 0.00 2.17
840 856 2.228343 GCAAGAGCAAAGCAGAGACATT 59.772 45.455 0.00 0.00 41.58 2.71
846 862 0.534877 TTCCGCAAGAGCAAAGCAGA 60.535 50.000 0.00 0.00 42.27 4.26
848 864 0.030638 GTTTCCGCAAGAGCAAAGCA 59.969 50.000 0.00 0.00 42.27 3.91
849 865 0.312102 AGTTTCCGCAAGAGCAAAGC 59.688 50.000 0.00 0.00 42.27 3.51
850 866 4.425577 AATAGTTTCCGCAAGAGCAAAG 57.574 40.909 0.00 0.00 42.27 2.77
851 867 4.394920 CCTAATAGTTTCCGCAAGAGCAAA 59.605 41.667 0.00 0.00 42.27 3.68
1051 1067 9.093458 AGTGGATAAAATGATTTCTTTCACCTT 57.907 29.630 7.47 0.00 0.00 3.50
1359 1381 3.925299 CGATTCGTATCCTAGCTCGTCTA 59.075 47.826 0.00 0.00 0.00 2.59
1470 1492 1.762522 ATGGCCGGCTCCTACATCAG 61.763 60.000 28.56 0.00 0.00 2.90
1475 1497 2.742116 TTGGATGGCCGGCTCCTAC 61.742 63.158 29.08 15.58 36.79 3.18
1476 1498 2.366301 TTGGATGGCCGGCTCCTA 60.366 61.111 29.08 21.80 36.79 2.94
1528 1553 7.590279 TGAAAGTCGTCCTATTTTCAAATTCC 58.410 34.615 0.00 0.00 36.81 3.01
1548 1574 7.432869 TGAAAATCACCCAGTTTACATGAAAG 58.567 34.615 0.00 0.00 0.00 2.62
1561 1587 7.158021 GGTCATGTTTAAATGAAAATCACCCA 58.842 34.615 0.00 0.00 38.28 4.51
1582 1608 9.522804 GAAATGTGTTAAAAAGTAACATGGTCA 57.477 29.630 0.00 0.00 39.30 4.02
1599 1625 6.096695 ACGCTTTTGTTTAGTGAAATGTGTT 58.903 32.000 0.00 0.00 30.21 3.32
1664 1690 7.177878 ACATGGAGAATAACAAAGACTTGGAT 58.822 34.615 0.00 0.00 36.82 3.41
1679 1705 4.194640 CAAAGATGTCGGACATGGAGAAT 58.805 43.478 27.11 2.93 39.27 2.40
1683 1709 1.678728 GGCAAAGATGTCGGACATGGA 60.679 52.381 27.11 0.00 39.27 3.41
1700 1726 2.745884 CGAGTTTCATGGCCGGCA 60.746 61.111 30.85 15.30 0.00 5.69
1705 1731 2.143122 TCACTTCACGAGTTTCATGGC 58.857 47.619 0.00 0.00 36.10 4.40
1712 1738 1.593006 CGCAACTTCACTTCACGAGTT 59.407 47.619 0.00 0.00 36.10 3.01
1713 1739 1.209128 CGCAACTTCACTTCACGAGT 58.791 50.000 0.00 0.00 39.89 4.18
1715 1741 0.927537 CACGCAACTTCACTTCACGA 59.072 50.000 0.00 0.00 0.00 4.35
1743 1769 4.021016 GTGTCACATGTCTTACTCTTCCCT 60.021 45.833 0.00 0.00 0.00 4.20
1769 1795 4.414337 AGGACATAGAAGATGAAGGTGC 57.586 45.455 0.00 0.00 0.00 5.01
1792 1818 5.934625 GCTCTGGACTCTGACAAAGAATTAA 59.065 40.000 0.00 0.00 33.37 1.40
1793 1819 5.482908 GCTCTGGACTCTGACAAAGAATTA 58.517 41.667 0.00 0.00 33.37 1.40
1805 1831 0.038455 ACGTGTAGGCTCTGGACTCT 59.962 55.000 0.00 0.00 30.59 3.24
1850 1876 2.417516 CTATGACCACGAGGCCGG 59.582 66.667 0.00 0.00 40.78 6.13
1883 1909 2.508663 GTTCTCACCGCCCTACGC 60.509 66.667 0.00 0.00 41.76 4.42
1884 1910 1.012486 GTTGTTCTCACCGCCCTACG 61.012 60.000 0.00 0.00 43.15 3.51
1885 1911 0.034337 TGTTGTTCTCACCGCCCTAC 59.966 55.000 0.00 0.00 0.00 3.18
1886 1912 0.034337 GTGTTGTTCTCACCGCCCTA 59.966 55.000 0.00 0.00 0.00 3.53
1887 1913 1.227853 GTGTTGTTCTCACCGCCCT 60.228 57.895 0.00 0.00 0.00 5.19
1903 1929 0.540365 AGAATGCCAACAGTGGGGTG 60.540 55.000 0.00 0.00 46.09 4.61
1904 1930 0.251341 GAGAATGCCAACAGTGGGGT 60.251 55.000 0.00 0.00 46.09 4.95
1909 1935 1.742761 CGGATGAGAATGCCAACAGT 58.257 50.000 0.00 0.00 0.00 3.55
1971 1997 3.624300 CTCAAGCAGGCGCGATCG 61.624 66.667 12.10 11.69 45.49 3.69
1991 2017 2.782222 CCTACTAGGCCGCGAGCAA 61.782 63.158 8.23 0.57 46.50 3.91
2022 2048 4.874966 CAGAGAACCTGAACTTCATCATCC 59.125 45.833 0.00 0.00 45.78 3.51
2044 2070 2.345991 GTAGCGGCCAAGACCACA 59.654 61.111 2.24 0.00 0.00 4.17
2059 2085 0.249953 TTTGTGAGCGAAAGGCCGTA 60.250 50.000 0.00 0.00 45.17 4.02
2074 2101 6.838382 AGGGAGTAATCTACAACAACTTTGT 58.162 36.000 0.00 0.00 44.72 2.83
2099 2126 7.116948 CAGAAACGCTCTTATATTATGGGACAG 59.883 40.741 0.00 0.00 34.24 3.51
2100 2127 6.929049 CAGAAACGCTCTTATATTATGGGACA 59.071 38.462 0.00 0.00 35.21 4.02
2101 2128 7.116519 GTCAGAAACGCTCTTATATTATGGGAC 59.883 40.741 0.00 0.00 29.07 4.46
2102 2129 7.152645 GTCAGAAACGCTCTTATATTATGGGA 58.847 38.462 0.00 0.00 29.07 4.37
2103 2130 6.369065 GGTCAGAAACGCTCTTATATTATGGG 59.631 42.308 0.00 0.00 29.07 4.00
2104 2131 7.155328 AGGTCAGAAACGCTCTTATATTATGG 58.845 38.462 0.00 0.00 29.07 2.74
2105 2132 9.130312 GTAGGTCAGAAACGCTCTTATATTATG 57.870 37.037 0.00 0.00 29.07 1.90
2106 2133 8.857098 TGTAGGTCAGAAACGCTCTTATATTAT 58.143 33.333 0.00 0.00 29.07 1.28
2107 2134 8.133627 GTGTAGGTCAGAAACGCTCTTATATTA 58.866 37.037 0.00 0.00 29.07 0.98
2108 2135 6.979238 GTGTAGGTCAGAAACGCTCTTATATT 59.021 38.462 0.00 0.00 29.07 1.28
2109 2136 6.321690 AGTGTAGGTCAGAAACGCTCTTATAT 59.678 38.462 0.00 0.00 29.07 0.86
2110 2137 5.651139 AGTGTAGGTCAGAAACGCTCTTATA 59.349 40.000 0.00 0.00 29.07 0.98
2111 2138 4.463186 AGTGTAGGTCAGAAACGCTCTTAT 59.537 41.667 0.00 0.00 29.07 1.73
2112 2139 3.825014 AGTGTAGGTCAGAAACGCTCTTA 59.175 43.478 0.00 0.00 29.07 2.10
2113 2140 2.628657 AGTGTAGGTCAGAAACGCTCTT 59.371 45.455 0.00 0.00 29.07 2.85
2114 2141 2.240279 AGTGTAGGTCAGAAACGCTCT 58.760 47.619 0.00 0.00 33.23 4.09
2115 2142 2.726832 AGTGTAGGTCAGAAACGCTC 57.273 50.000 0.00 0.00 28.03 5.03
2116 2143 3.057456 CACTAGTGTAGGTCAGAAACGCT 60.057 47.826 15.06 0.00 37.67 5.07
2117 2144 3.243336 CACTAGTGTAGGTCAGAAACGC 58.757 50.000 15.06 0.00 0.00 4.84
2118 2145 4.500603 ACACTAGTGTAGGTCAGAAACG 57.499 45.455 26.91 0.00 42.90 3.60
2119 2146 7.924947 AGTTTTACACTAGTGTAGGTCAGAAAC 59.075 37.037 30.02 30.02 45.57 2.78
2120 2147 8.015185 AGTTTTACACTAGTGTAGGTCAGAAA 57.985 34.615 29.34 23.17 45.57 2.52
2121 2148 7.592885 AGTTTTACACTAGTGTAGGTCAGAA 57.407 36.000 29.34 19.55 45.57 3.02
2152 2179 8.152246 TCCGTCCCATAATATAAGATCGTTTTT 58.848 33.333 0.00 0.00 0.00 1.94
2153 2180 7.673180 TCCGTCCCATAATATAAGATCGTTTT 58.327 34.615 0.00 0.00 0.00 2.43
2154 2181 7.235935 TCCGTCCCATAATATAAGATCGTTT 57.764 36.000 0.00 0.00 0.00 3.60
2155 2182 6.127423 CCTCCGTCCCATAATATAAGATCGTT 60.127 42.308 0.00 0.00 0.00 3.85
2156 2183 5.360144 CCTCCGTCCCATAATATAAGATCGT 59.640 44.000 0.00 0.00 0.00 3.73
2157 2184 5.221263 CCCTCCGTCCCATAATATAAGATCG 60.221 48.000 0.00 0.00 0.00 3.69
2158 2185 5.070580 CCCCTCCGTCCCATAATATAAGATC 59.929 48.000 0.00 0.00 0.00 2.75
2159 2186 4.969359 CCCCTCCGTCCCATAATATAAGAT 59.031 45.833 0.00 0.00 0.00 2.40
2160 2187 4.202858 ACCCCTCCGTCCCATAATATAAGA 60.203 45.833 0.00 0.00 0.00 2.10
2161 2188 4.101856 ACCCCTCCGTCCCATAATATAAG 58.898 47.826 0.00 0.00 0.00 1.73
2162 2189 4.150516 ACCCCTCCGTCCCATAATATAA 57.849 45.455 0.00 0.00 0.00 0.98
2163 2190 3.858696 ACCCCTCCGTCCCATAATATA 57.141 47.619 0.00 0.00 0.00 0.86
2164 2191 2.735259 ACCCCTCCGTCCCATAATAT 57.265 50.000 0.00 0.00 0.00 1.28
2165 2192 3.634218 TTACCCCTCCGTCCCATAATA 57.366 47.619 0.00 0.00 0.00 0.98
2166 2193 2.500269 TTACCCCTCCGTCCCATAAT 57.500 50.000 0.00 0.00 0.00 1.28
2167 2194 2.051692 CATTACCCCTCCGTCCCATAA 58.948 52.381 0.00 0.00 0.00 1.90
2168 2195 1.724545 CATTACCCCTCCGTCCCATA 58.275 55.000 0.00 0.00 0.00 2.74
2169 2196 1.060163 CCATTACCCCTCCGTCCCAT 61.060 60.000 0.00 0.00 0.00 4.00
2170 2197 1.691337 CCATTACCCCTCCGTCCCA 60.691 63.158 0.00 0.00 0.00 4.37
2171 2198 0.767060 ATCCATTACCCCTCCGTCCC 60.767 60.000 0.00 0.00 0.00 4.46
2172 2199 1.137697 AATCCATTACCCCTCCGTCC 58.862 55.000 0.00 0.00 0.00 4.79
2173 2200 2.572290 CAAATCCATTACCCCTCCGTC 58.428 52.381 0.00 0.00 0.00 4.79
2174 2201 1.214424 CCAAATCCATTACCCCTCCGT 59.786 52.381 0.00 0.00 0.00 4.69
2175 2202 1.214424 ACCAAATCCATTACCCCTCCG 59.786 52.381 0.00 0.00 0.00 4.63
2176 2203 3.052869 AGAACCAAATCCATTACCCCTCC 60.053 47.826 0.00 0.00 0.00 4.30
2177 2204 4.207955 GAGAACCAAATCCATTACCCCTC 58.792 47.826 0.00 0.00 0.00 4.30
2178 2205 3.052869 GGAGAACCAAATCCATTACCCCT 60.053 47.826 0.00 0.00 35.54 4.79
2179 2206 3.296854 GGAGAACCAAATCCATTACCCC 58.703 50.000 0.00 0.00 35.54 4.95
2180 2207 2.949644 CGGAGAACCAAATCCATTACCC 59.050 50.000 0.00 0.00 35.14 3.69
2181 2208 2.949644 CCGGAGAACCAAATCCATTACC 59.050 50.000 0.00 0.00 35.14 2.85
2182 2209 3.617284 ACCGGAGAACCAAATCCATTAC 58.383 45.455 9.46 0.00 35.14 1.89
2183 2210 4.685030 GCTACCGGAGAACCAAATCCATTA 60.685 45.833 9.46 0.00 35.14 1.90
2184 2211 2.899303 ACCGGAGAACCAAATCCATT 57.101 45.000 9.46 0.00 35.14 3.16
2185 2212 2.421529 GCTACCGGAGAACCAAATCCAT 60.422 50.000 9.46 0.00 35.14 3.41
2186 2213 1.065709 GCTACCGGAGAACCAAATCCA 60.066 52.381 9.46 0.00 35.14 3.41
2187 2214 1.664873 GCTACCGGAGAACCAAATCC 58.335 55.000 9.46 0.00 35.59 3.01
2188 2215 1.664873 GGCTACCGGAGAACCAAATC 58.335 55.000 9.46 0.00 35.59 2.17
2189 2216 0.107848 CGGCTACCGGAGAACCAAAT 60.108 55.000 9.46 0.00 44.15 2.32
2190 2217 1.294138 CGGCTACCGGAGAACCAAA 59.706 57.895 9.46 0.00 44.15 3.28
2191 2218 2.975536 CGGCTACCGGAGAACCAA 59.024 61.111 9.46 0.00 44.15 3.67
2201 2228 0.941463 CTCGCACATCATCGGCTACC 60.941 60.000 0.00 0.00 0.00 3.18
2202 2229 0.941463 CCTCGCACATCATCGGCTAC 60.941 60.000 0.00 0.00 0.00 3.58
2203 2230 1.363807 CCTCGCACATCATCGGCTA 59.636 57.895 0.00 0.00 0.00 3.93
2204 2231 2.107750 CCTCGCACATCATCGGCT 59.892 61.111 0.00 0.00 0.00 5.52
2205 2232 2.202932 ACCTCGCACATCATCGGC 60.203 61.111 0.00 0.00 0.00 5.54
2206 2233 0.873312 CTCACCTCGCACATCATCGG 60.873 60.000 0.00 0.00 0.00 4.18
2207 2234 0.179127 ACTCACCTCGCACATCATCG 60.179 55.000 0.00 0.00 0.00 3.84
2208 2235 1.134995 TCACTCACCTCGCACATCATC 60.135 52.381 0.00 0.00 0.00 2.92
2209 2236 0.897621 TCACTCACCTCGCACATCAT 59.102 50.000 0.00 0.00 0.00 2.45
2210 2237 0.244721 CTCACTCACCTCGCACATCA 59.755 55.000 0.00 0.00 0.00 3.07
2211 2238 0.244994 ACTCACTCACCTCGCACATC 59.755 55.000 0.00 0.00 0.00 3.06
2212 2239 0.681733 AACTCACTCACCTCGCACAT 59.318 50.000 0.00 0.00 0.00 3.21
2213 2240 0.464036 AAACTCACTCACCTCGCACA 59.536 50.000 0.00 0.00 0.00 4.57
2214 2241 0.861837 CAAACTCACTCACCTCGCAC 59.138 55.000 0.00 0.00 0.00 5.34
2215 2242 0.464036 ACAAACTCACTCACCTCGCA 59.536 50.000 0.00 0.00 0.00 5.10
2216 2243 2.059541 GTACAAACTCACTCACCTCGC 58.940 52.381 0.00 0.00 0.00 5.03
2217 2244 2.035449 TGGTACAAACTCACTCACCTCG 59.965 50.000 0.00 0.00 31.92 4.63
2218 2245 3.069729 AGTGGTACAAACTCACTCACCTC 59.930 47.826 0.00 0.00 44.16 3.85
2219 2246 3.039011 AGTGGTACAAACTCACTCACCT 58.961 45.455 0.00 0.00 44.16 4.00
2220 2247 3.131396 CAGTGGTACAAACTCACTCACC 58.869 50.000 0.00 0.00 44.16 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.