Multiple sequence alignment - TraesCS4B01G172500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G172500 chr4B 100.000 5303 0 0 1 5303 377381858 377376556 0.000000e+00 9793.0
1 TraesCS4B01G172500 chr4B 86.499 874 108 5 2411 3283 207106571 207105707 0.000000e+00 952.0
2 TraesCS4B01G172500 chr4B 82.937 252 15 4 4867 5090 234685922 234685671 9.010000e-48 202.0
3 TraesCS4B01G172500 chr4B 93.617 94 5 1 2320 2413 377379495 377379403 7.160000e-29 139.0
4 TraesCS4B01G172500 chr4B 93.617 94 5 1 2364 2456 377379539 377379446 7.160000e-29 139.0
5 TraesCS4B01G172500 chr4B 100.000 28 0 0 5082 5109 234685663 234685636 1.000000e-02 52.8
6 TraesCS4B01G172500 chr4D 94.220 1730 68 13 1 1708 302404415 302402696 0.000000e+00 2612.0
7 TraesCS4B01G172500 chr4D 86.883 1601 118 41 3332 4870 302402462 302400892 0.000000e+00 1709.0
8 TraesCS4B01G172500 chr4D 84.641 905 124 9 2388 3283 505969151 505970049 0.000000e+00 887.0
9 TraesCS4B01G172500 chr4D 87.449 247 20 8 1860 2101 302402690 302402450 1.880000e-69 274.0
10 TraesCS4B01G172500 chr4D 88.384 198 21 2 5106 5303 302400895 302400700 2.470000e-58 237.0
11 TraesCS4B01G172500 chr4D 85.909 220 28 3 2147 2363 505968990 505969209 1.150000e-56 231.0
12 TraesCS4B01G172500 chr4D 81.600 250 17 11 4870 5090 244876247 244875998 4.220000e-41 180.0
13 TraesCS4B01G172500 chr4D 90.476 126 11 1 1741 1865 409444351 409444476 1.180000e-36 165.0
14 TraesCS4B01G172500 chr4A 93.910 1133 39 7 812 1942 177612064 177613168 0.000000e+00 1683.0
15 TraesCS4B01G172500 chr4A 88.856 1364 81 27 3332 4643 177614311 177615655 0.000000e+00 1611.0
16 TraesCS4B01G172500 chr4A 94.737 228 10 1 4643 4870 177615887 177616112 2.350000e-93 353.0
17 TraesCS4B01G172500 chr4A 94.949 198 10 0 5106 5303 177616109 177616306 1.430000e-80 311.0
18 TraesCS4B01G172500 chr4A 82.520 246 14 6 4874 5090 151128288 151128533 7.010000e-44 189.0
19 TraesCS4B01G172500 chr4A 86.250 160 20 2 572 731 177522745 177522902 7.060000e-39 172.0
20 TraesCS4B01G172500 chr4A 97.436 78 2 0 2023 2100 177614245 177614322 3.330000e-27 134.0
21 TraesCS4B01G172500 chr4A 96.053 76 3 0 1952 2027 177613800 177613875 2.010000e-24 124.0
22 TraesCS4B01G172500 chr6D 87.126 870 107 2 2419 3283 451860102 451860971 0.000000e+00 981.0
23 TraesCS4B01G172500 chr6D 89.048 210 19 3 2164 2369 86803371 86803162 1.890000e-64 257.0
24 TraesCS4B01G172500 chr6D 84.615 91 13 1 558 647 383485869 383485959 7.310000e-14 89.8
25 TraesCS4B01G172500 chr6D 96.078 51 1 1 3284 3333 467114721 467114771 1.220000e-11 82.4
26 TraesCS4B01G172500 chr7D 86.659 877 113 3 2409 3283 563893191 563892317 0.000000e+00 968.0
27 TraesCS4B01G172500 chr7D 92.562 121 8 1 1746 1865 236827381 236827501 7.060000e-39 172.0
28 TraesCS4B01G172500 chr7D 90.152 132 12 1 1741 1871 175941817 175941686 2.540000e-38 171.0
29 TraesCS4B01G172500 chr7D 82.199 191 11 8 4899 5078 22768955 22769133 5.540000e-30 143.0
30 TraesCS4B01G172500 chr7D 85.345 116 7 1 4985 5090 409098364 409098249 1.560000e-20 111.0
31 TraesCS4B01G172500 chr7D 85.366 82 9 3 567 646 54240762 54240682 1.220000e-11 82.4
32 TraesCS4B01G172500 chr7D 88.525 61 5 1 3282 3340 453307031 453306971 7.370000e-09 73.1
33 TraesCS4B01G172500 chr7B 86.456 886 110 5 2411 3295 63028970 63028094 0.000000e+00 963.0
34 TraesCS4B01G172500 chr7B 82.800 250 14 10 4867 5087 647818304 647818553 4.190000e-46 196.0
35 TraesCS4B01G172500 chr7B 91.803 122 9 1 1745 1865 284953352 284953473 9.130000e-38 169.0
36 TraesCS4B01G172500 chr5B 87.007 862 102 5 2423 3283 473652794 473651942 0.000000e+00 963.0
37 TraesCS4B01G172500 chr5B 85.841 226 27 4 2143 2367 473652984 473652763 8.880000e-58 235.0
38 TraesCS4B01G172500 chr5B 88.710 62 6 1 3285 3346 277265171 277265231 2.050000e-09 75.0
39 TraesCS4B01G172500 chr5B 88.710 62 3 4 3283 3342 317069291 317069232 7.370000e-09 73.1
40 TraesCS4B01G172500 chr3A 86.152 881 119 1 2415 3295 492704762 492703885 0.000000e+00 948.0
41 TraesCS4B01G172500 chr3A 86.458 864 97 9 2422 3283 187294034 187294879 0.000000e+00 929.0
42 TraesCS4B01G172500 chr3A 81.275 251 15 12 4870 5090 643458972 643459220 1.960000e-39 174.0
43 TraesCS4B01G172500 chr3A 86.726 113 14 1 4978 5090 192564385 192564496 2.010000e-24 124.0
44 TraesCS4B01G172500 chr3A 94.231 52 1 1 3283 3332 298151246 298151297 1.580000e-10 78.7
45 TraesCS4B01G172500 chr7A 86.416 876 100 9 2422 3295 213833775 213832917 0.000000e+00 941.0
46 TraesCS4B01G172500 chr7A 86.574 216 29 0 2145 2360 734477993 734478208 6.860000e-59 239.0
47 TraesCS4B01G172500 chr7A 92.562 121 8 1 1746 1865 252184458 252184578 7.060000e-39 172.0
48 TraesCS4B01G172500 chr7A 79.381 97 10 6 547 635 163385404 163385498 5.740000e-05 60.2
49 TraesCS4B01G172500 chrUn 89.381 226 20 4 2143 2366 2159281 2159058 1.120000e-71 281.0
50 TraesCS4B01G172500 chrUn 86.425 221 29 1 2147 2366 915016 914796 1.910000e-59 241.0
51 TraesCS4B01G172500 chr1D 90.187 214 20 1 2154 2366 390431855 390431642 1.450000e-70 278.0
52 TraesCS4B01G172500 chr1D 93.277 119 8 0 4867 4985 468747517 468747635 5.460000e-40 176.0
53 TraesCS4B01G172500 chr1D 87.209 86 9 1 551 636 470860392 470860475 4.370000e-16 97.1
54 TraesCS4B01G172500 chr1D 82.292 96 14 2 537 630 8100095 8100001 4.400000e-11 80.5
55 TraesCS4B01G172500 chr1D 89.831 59 5 1 3283 3340 449152043 449152101 2.050000e-09 75.0
56 TraesCS4B01G172500 chr6A 88.293 205 22 2 2164 2366 104983289 104983085 1.480000e-60 244.0
57 TraesCS4B01G172500 chr1A 86.425 221 29 1 2147 2366 391739420 391739640 1.910000e-59 241.0
58 TraesCS4B01G172500 chr2B 84.774 243 14 5 4870 5090 309501341 309501100 6.910000e-54 222.0
59 TraesCS4B01G172500 chr2B 81.569 255 17 8 4866 5090 741946994 741946740 3.260000e-42 183.0
60 TraesCS4B01G172500 chr2B 81.429 140 10 5 4985 5109 234024018 234024156 3.380000e-17 100.0
61 TraesCS4B01G172500 chr6B 81.550 271 19 9 4867 5107 86744382 86744651 1.510000e-45 195.0
62 TraesCS4B01G172500 chr6B 82.000 250 16 8 4868 5088 122299641 122299890 9.070000e-43 185.0
63 TraesCS4B01G172500 chr6B 80.989 263 19 6 4874 5107 86686943 86687203 4.220000e-41 180.0
64 TraesCS4B01G172500 chr2D 81.423 253 17 10 4867 5090 52949430 52949179 4.220000e-41 180.0
65 TraesCS4B01G172500 chr2D 91.270 126 10 1 1741 1865 388833659 388833784 2.540000e-38 171.0
66 TraesCS4B01G172500 chr2D 82.394 142 13 3 4978 5109 226921491 226921630 4.340000e-21 113.0
67 TraesCS4B01G172500 chr2D 91.228 57 4 1 3283 3338 617958174 617958118 5.690000e-10 76.8
68 TraesCS4B01G172500 chr3B 80.784 255 20 7 4860 5085 775715925 775715671 7.060000e-39 172.0
69 TraesCS4B01G172500 chr3B 79.054 148 15 5 4978 5109 136617768 136617915 2.630000e-13 87.9
70 TraesCS4B01G172500 chr5D 91.870 123 9 1 1744 1865 360541856 360541978 2.540000e-38 171.0
71 TraesCS4B01G172500 chr5D 96.154 52 1 1 3283 3333 325460375 325460324 3.400000e-12 84.2
72 TraesCS4B01G172500 chr1B 81.148 244 16 11 4868 5082 623684049 623684291 9.130000e-38 169.0
73 TraesCS4B01G172500 chr1B 91.129 124 9 2 1742 1864 237009317 237009195 3.290000e-37 167.0
74 TraesCS4B01G172500 chr3D 85.859 99 9 5 551 646 591097643 591097547 3.380000e-17 100.0
75 TraesCS4B01G172500 chr3D 96.491 57 2 0 5034 5090 607513447 607513503 1.570000e-15 95.3
76 TraesCS4B01G172500 chr3D 91.379 58 3 2 3284 3341 39586994 39586939 1.580000e-10 78.7
77 TraesCS4B01G172500 chr5A 84.158 101 14 2 537 635 489685775 489685875 4.370000e-16 97.1
78 TraesCS4B01G172500 chr5A 84.158 101 14 2 537 635 489685927 489686027 4.370000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G172500 chr4B 377376556 377381858 5302 True 3357.000000 9793 95.744667 1 5303 3 chr4B.!!$R3 5302
1 TraesCS4B01G172500 chr4B 207105707 207106571 864 True 952.000000 952 86.499000 2411 3283 1 chr4B.!!$R1 872
2 TraesCS4B01G172500 chr4D 302400700 302404415 3715 True 1208.000000 2612 89.234000 1 5303 4 chr4D.!!$R2 5302
3 TraesCS4B01G172500 chr4D 505968990 505970049 1059 False 559.000000 887 85.275000 2147 3283 2 chr4D.!!$F2 1136
4 TraesCS4B01G172500 chr4A 177612064 177616306 4242 False 702.666667 1683 94.323500 812 5303 6 chr4A.!!$F3 4491
5 TraesCS4B01G172500 chr6D 451860102 451860971 869 False 981.000000 981 87.126000 2419 3283 1 chr6D.!!$F2 864
6 TraesCS4B01G172500 chr7D 563892317 563893191 874 True 968.000000 968 86.659000 2409 3283 1 chr7D.!!$R5 874
7 TraesCS4B01G172500 chr7B 63028094 63028970 876 True 963.000000 963 86.456000 2411 3295 1 chr7B.!!$R1 884
8 TraesCS4B01G172500 chr5B 473651942 473652984 1042 True 599.000000 963 86.424000 2143 3283 2 chr5B.!!$R2 1140
9 TraesCS4B01G172500 chr3A 492703885 492704762 877 True 948.000000 948 86.152000 2415 3295 1 chr3A.!!$R1 880
10 TraesCS4B01G172500 chr3A 187294034 187294879 845 False 929.000000 929 86.458000 2422 3283 1 chr3A.!!$F1 861
11 TraesCS4B01G172500 chr7A 213832917 213833775 858 True 941.000000 941 86.416000 2422 3295 1 chr7A.!!$R1 873

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
482 488 0.110486 TGCCTCCCTTTTCACCTGTC 59.890 55.0 0.0 0.0 0.0 3.51 F
1948 1992 0.846015 TATAGTGCCTGCCCAATGCT 59.154 50.0 0.0 0.0 42.0 3.79 F
3131 4183 0.029567 CGACGACCTATGAGAGTGCC 59.970 60.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 2622 0.242825 GCTTGCACTGCATGACATGT 59.757 50.0 18.59 0.0 38.76 3.21 R
3298 4356 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.0 0.00 0.0 36.73 5.73 R
4316 5446 0.096454 GAAATCTTACACCACGCGGC 59.904 55.0 12.47 0.0 34.57 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
326 332 2.223711 CCCAGGGAACAAACAGTTTTCG 60.224 50.000 0.00 0.00 41.51 3.46
405 411 1.736126 GTTTAGCAGGAACCTAACCGC 59.264 52.381 0.00 0.00 0.00 5.68
428 434 0.394192 TCATTGGCTAGCAGCGCTAT 59.606 50.000 18.24 4.19 43.62 2.97
480 486 1.467920 GATGCCTCCCTTTTCACCTG 58.532 55.000 0.00 0.00 0.00 4.00
482 488 0.110486 TGCCTCCCTTTTCACCTGTC 59.890 55.000 0.00 0.00 0.00 3.51
498 504 4.520874 CACCTGTCTCTCTAGTTGAAGTGA 59.479 45.833 0.00 0.00 0.00 3.41
504 510 6.925718 TGTCTCTCTAGTTGAAGTGAACATTG 59.074 38.462 0.00 0.00 0.00 2.82
505 511 6.367422 GTCTCTCTAGTTGAAGTGAACATTGG 59.633 42.308 0.00 0.00 0.00 3.16
528 534 1.291877 GCCGTCCCATATGTGCGATC 61.292 60.000 1.24 0.00 0.00 3.69
535 541 1.334059 CCATATGTGCGATCGTTTGCC 60.334 52.381 17.81 0.00 0.00 4.52
557 563 5.006746 GCCCACTAGATGTTAATGAAGAACG 59.993 44.000 0.00 0.00 0.00 3.95
565 571 8.690680 AGATGTTAATGAAGAACGTAGAACTC 57.309 34.615 0.00 0.00 0.00 3.01
784 798 1.819288 GACTGTGAGATCCGGAACTCA 59.181 52.381 33.49 33.49 40.22 3.41
785 799 1.821753 ACTGTGAGATCCGGAACTCAG 59.178 52.381 36.52 28.70 42.56 3.35
786 800 1.821753 CTGTGAGATCCGGAACTCAGT 59.178 52.381 36.52 8.82 42.56 3.41
787 801 1.819288 TGTGAGATCCGGAACTCAGTC 59.181 52.381 36.52 27.44 42.56 3.51
788 802 1.819288 GTGAGATCCGGAACTCAGTCA 59.181 52.381 36.52 18.70 42.56 3.41
807 821 4.838986 AGTCAGCCAGGAAAAGAAGTAGTA 59.161 41.667 0.00 0.00 0.00 1.82
827 843 1.338337 ACATGCCGAAGATCCTAGTCG 59.662 52.381 0.00 0.00 34.58 4.18
833 849 2.541999 CCGAAGATCCTAGTCGACAAGC 60.542 54.545 19.50 2.87 36.92 4.01
842 858 2.434185 TCGACAAGCCCACATCGC 60.434 61.111 0.00 0.00 34.59 4.58
889 910 2.392613 AAGTTCACTGGCAAAGCGCG 62.393 55.000 0.00 0.00 43.84 6.86
1276 1298 1.106944 CACCGGGCAAGTGGAGTTTT 61.107 55.000 6.32 0.00 0.00 2.43
1279 1301 1.318576 CGGGCAAGTGGAGTTTTCTT 58.681 50.000 0.00 0.00 0.00 2.52
1318 1341 1.724582 GGTGGTGTTTTCTGTGCGCT 61.725 55.000 9.73 0.00 0.00 5.92
1475 1498 2.555123 GCTTGTGATCGAGCCCAAA 58.445 52.632 0.00 0.00 43.31 3.28
1654 1677 2.412323 CGCCAATGCATGCAGTCCT 61.412 57.895 26.69 6.06 37.32 3.85
1655 1678 1.895238 GCCAATGCATGCAGTCCTT 59.105 52.632 26.69 12.55 37.47 3.36
1704 1727 5.852282 GCTATAAGCCCCTTCAATTGAAA 57.148 39.130 20.82 5.70 34.48 2.69
1705 1728 6.410942 GCTATAAGCCCCTTCAATTGAAAT 57.589 37.500 20.82 12.21 34.48 2.17
1706 1729 6.820335 GCTATAAGCCCCTTCAATTGAAATT 58.180 36.000 20.82 12.76 34.48 1.82
1707 1730 6.925718 GCTATAAGCCCCTTCAATTGAAATTC 59.074 38.462 20.82 10.73 34.48 2.17
1708 1731 6.872585 ATAAGCCCCTTCAATTGAAATTCA 57.127 33.333 20.82 0.00 33.07 2.57
1709 1732 4.813750 AGCCCCTTCAATTGAAATTCAG 57.186 40.909 20.82 9.40 33.07 3.02
1710 1733 3.055602 AGCCCCTTCAATTGAAATTCAGC 60.056 43.478 20.82 17.53 33.07 4.26
1711 1734 3.055602 GCCCCTTCAATTGAAATTCAGCT 60.056 43.478 20.82 0.00 33.07 4.24
1712 1735 4.501071 CCCCTTCAATTGAAATTCAGCTG 58.499 43.478 20.82 7.63 33.07 4.24
1713 1736 4.501071 CCCTTCAATTGAAATTCAGCTGG 58.499 43.478 20.82 15.04 33.07 4.85
1750 1787 4.593157 TCGCTGAACATTACAACAACAAC 58.407 39.130 0.00 0.00 0.00 3.32
1767 1804 6.560711 ACAACAACAACAACTAAGCCTTTAG 58.439 36.000 0.00 0.00 41.68 1.85
1783 1821 5.365314 AGCCTTTAGTTCAAACAAATTGGGA 59.635 36.000 0.00 0.00 39.62 4.37
1792 1830 5.200483 TCAAACAAATTGGGATAGGCTAGG 58.800 41.667 0.00 0.00 39.62 3.02
1885 1923 9.677567 CCCCTGAACATTACAATAAATAAATCG 57.322 33.333 0.00 0.00 0.00 3.34
1886 1924 9.180678 CCCTGAACATTACAATAAATAAATCGC 57.819 33.333 0.00 0.00 0.00 4.58
1920 1958 4.547532 CGAGTTGTGACTAGTAAGTGCTT 58.452 43.478 0.00 0.00 35.56 3.91
1948 1992 0.846015 TATAGTGCCTGCCCAATGCT 59.154 50.000 0.00 0.00 42.00 3.79
1949 1993 0.846015 ATAGTGCCTGCCCAATGCTA 59.154 50.000 0.00 0.00 42.00 3.49
1950 1994 0.846015 TAGTGCCTGCCCAATGCTAT 59.154 50.000 0.00 0.00 42.00 2.97
2036 3071 3.525537 CATCGGTGCAGTCTTGTATCTT 58.474 45.455 0.00 0.00 0.00 2.40
2130 3165 4.025401 GGTGCGCGGTGGTCAAAG 62.025 66.667 8.83 0.00 0.00 2.77
2131 3166 2.970324 GTGCGCGGTGGTCAAAGA 60.970 61.111 8.83 0.00 0.00 2.52
2132 3167 2.031919 TGCGCGGTGGTCAAAGAT 59.968 55.556 8.83 0.00 0.00 2.40
2133 3168 1.017177 GTGCGCGGTGGTCAAAGATA 61.017 55.000 8.83 0.00 0.00 1.98
2134 3169 0.739462 TGCGCGGTGGTCAAAGATAG 60.739 55.000 8.83 0.00 0.00 2.08
2135 3170 2.006772 CGCGGTGGTCAAAGATAGC 58.993 57.895 0.00 0.00 0.00 2.97
2136 3171 1.429148 CGCGGTGGTCAAAGATAGCC 61.429 60.000 0.00 0.00 0.00 3.93
2137 3172 1.095807 GCGGTGGTCAAAGATAGCCC 61.096 60.000 0.00 0.00 0.00 5.19
2138 3173 0.463833 CGGTGGTCAAAGATAGCCCC 60.464 60.000 0.00 0.00 0.00 5.80
2139 3174 0.623723 GGTGGTCAAAGATAGCCCCA 59.376 55.000 0.00 0.00 0.00 4.96
2140 3175 1.408822 GGTGGTCAAAGATAGCCCCAG 60.409 57.143 0.00 0.00 0.00 4.45
2141 3176 0.255890 TGGTCAAAGATAGCCCCAGC 59.744 55.000 0.00 0.00 40.32 4.85
2142 3177 0.466372 GGTCAAAGATAGCCCCAGCC 60.466 60.000 0.00 0.00 41.25 4.85
2143 3178 0.548510 GTCAAAGATAGCCCCAGCCT 59.451 55.000 0.00 0.00 41.25 4.58
2144 3179 0.839946 TCAAAGATAGCCCCAGCCTC 59.160 55.000 0.00 0.00 41.25 4.70
2145 3180 0.548031 CAAAGATAGCCCCAGCCTCA 59.452 55.000 0.00 0.00 41.25 3.86
2146 3181 0.548510 AAAGATAGCCCCAGCCTCAC 59.451 55.000 0.00 0.00 41.25 3.51
2147 3182 1.348775 AAGATAGCCCCAGCCTCACC 61.349 60.000 0.00 0.00 41.25 4.02
2148 3183 2.774351 ATAGCCCCAGCCTCACCC 60.774 66.667 0.00 0.00 41.25 4.61
2385 3422 4.394712 GACCCCTGGCGTGTGGAG 62.395 72.222 0.00 0.00 0.00 3.86
2407 3444 4.329545 GGCTTGTCGGGTCCTGCA 62.330 66.667 0.00 0.00 0.00 4.41
2408 3445 2.743928 GCTTGTCGGGTCCTGCAG 60.744 66.667 6.78 6.78 0.00 4.41
2409 3446 2.743928 CTTGTCGGGTCCTGCAGC 60.744 66.667 8.66 0.00 0.00 5.25
2557 3600 0.536724 TGGTGGATGGATCGACTGTG 59.463 55.000 0.00 0.00 36.05 3.66
2755 3801 0.685660 GTCGTCCCCTTCTTGAAGGT 59.314 55.000 23.12 0.00 38.28 3.50
2797 3843 2.838225 CCTATCCGCCACCTCCGT 60.838 66.667 0.00 0.00 0.00 4.69
2887 3937 3.856900 TCTTGGAGGTATGCATAGGCTA 58.143 45.455 6.67 0.00 41.91 3.93
2908 3958 2.351276 GGACCAGTGGACGGCATT 59.649 61.111 18.40 0.00 0.00 3.56
2932 3982 0.889186 GTGGAGCGGTGTTCCATGTT 60.889 55.000 5.67 0.00 44.20 2.71
2998 4048 1.018752 TGGCGACGAATGTGTGATGG 61.019 55.000 0.00 0.00 0.00 3.51
3006 4056 0.250684 AATGTGTGATGGTGGACGCA 60.251 50.000 0.00 0.00 37.03 5.24
3053 4103 2.028484 GGTGGCGTCGACAACAGA 59.972 61.111 12.34 0.00 0.00 3.41
3074 4124 3.195698 GGCAAGGTCGATGCGTCC 61.196 66.667 0.00 0.00 44.75 4.79
3131 4183 0.029567 CGACGACCTATGAGAGTGCC 59.970 60.000 0.00 0.00 0.00 5.01
3133 4185 1.751924 GACGACCTATGAGAGTGCCTT 59.248 52.381 0.00 0.00 0.00 4.35
3201 4259 2.614057 CCGGCTTTAGATGTTAGGCTTG 59.386 50.000 0.00 0.00 32.77 4.01
3272 4330 4.635699 TGGATAGGAGTAGCGACAGATA 57.364 45.455 0.00 0.00 0.00 1.98
3283 4341 3.397482 AGCGACAGATATTGCCAAGATC 58.603 45.455 3.87 3.87 0.00 2.75
3284 4342 2.481952 GCGACAGATATTGCCAAGATCC 59.518 50.000 8.37 0.00 29.46 3.36
3286 4344 3.494924 CGACAGATATTGCCAAGATCCCA 60.495 47.826 8.37 0.00 29.46 4.37
3290 4348 2.353357 TATTGCCAAGATCCCAGCTG 57.647 50.000 6.78 6.78 0.00 4.24
3295 4353 0.464013 CCAAGATCCCAGCTGCAGAG 60.464 60.000 20.43 8.91 0.00 3.35
3296 4354 0.464013 CAAGATCCCAGCTGCAGAGG 60.464 60.000 20.43 18.00 0.00 3.69
3297 4355 2.203181 GATCCCAGCTGCAGAGGC 60.203 66.667 20.43 2.30 41.68 4.70
3298 4356 3.771110 GATCCCAGCTGCAGAGGCC 62.771 68.421 20.43 0.00 40.13 5.19
3308 4366 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
3319 4377 2.899303 GGGGTCATCCTCCTTTTCAA 57.101 50.000 0.00 0.00 35.33 2.69
3320 4378 3.169512 GGGGTCATCCTCCTTTTCAAA 57.830 47.619 0.00 0.00 35.33 2.69
3321 4379 3.506398 GGGGTCATCCTCCTTTTCAAAA 58.494 45.455 0.00 0.00 35.33 2.44
3322 4380 4.096681 GGGGTCATCCTCCTTTTCAAAAT 58.903 43.478 0.00 0.00 35.33 1.82
3323 4381 5.269189 GGGGTCATCCTCCTTTTCAAAATA 58.731 41.667 0.00 0.00 35.33 1.40
3324 4382 5.719563 GGGGTCATCCTCCTTTTCAAAATAA 59.280 40.000 0.00 0.00 35.33 1.40
3325 4383 6.212589 GGGGTCATCCTCCTTTTCAAAATAAA 59.787 38.462 0.00 0.00 35.33 1.40
3326 4384 7.256511 GGGGTCATCCTCCTTTTCAAAATAAAA 60.257 37.037 0.00 0.00 35.33 1.52
3327 4385 8.321353 GGGTCATCCTCCTTTTCAAAATAAAAT 58.679 33.333 0.00 0.00 0.00 1.82
3355 4413 2.211806 GCAAAGGCATGCACTTCAAAA 58.788 42.857 21.36 0.00 45.70 2.44
3356 4414 2.809696 GCAAAGGCATGCACTTCAAAAT 59.190 40.909 21.36 2.47 45.70 1.82
3414 4472 8.432359 CAAAAGAAAAACACTAGTTTGGTTCAC 58.568 33.333 0.00 0.00 46.79 3.18
3437 4495 2.233566 ATGCAGTGCCCTTCCAGGA 61.234 57.895 13.72 0.00 37.67 3.86
3443 4501 1.217942 AGTGCCCTTCCAGGAAAGTTT 59.782 47.619 2.72 0.00 37.67 2.66
3448 4506 4.538490 TGCCCTTCCAGGAAAGTTTAGATA 59.462 41.667 2.72 0.00 37.67 1.98
3449 4507 5.193728 TGCCCTTCCAGGAAAGTTTAGATAT 59.806 40.000 2.72 0.00 37.67 1.63
3481 4539 4.141937 ACATGTGTAGATATGCCACGAGTT 60.142 41.667 0.00 0.00 31.75 3.01
3512 4570 2.100252 CACATGGTGATGATTTGAGGGC 59.900 50.000 0.00 0.00 35.23 5.19
3532 4609 3.549794 GCCAATCTTACATGGAAGCTCT 58.450 45.455 13.28 0.00 39.12 4.09
3558 4643 7.633789 AGTCCAGGACATGTATTTCAATAAGT 58.366 34.615 22.31 0.00 34.60 2.24
3679 4766 5.126384 TCCTGTTCTGATTTTGTTTTTCGGT 59.874 36.000 0.00 0.00 0.00 4.69
3764 4852 2.232452 CCCGTTCAATAATTGGGCACAA 59.768 45.455 2.55 2.55 41.59 3.33
3773 4861 6.265196 TCAATAATTGGGCACAATCTGGATAC 59.735 38.462 16.04 0.00 46.25 2.24
3778 4866 2.420129 GGGCACAATCTGGATACGAGTT 60.420 50.000 0.00 0.00 42.51 3.01
3834 4922 5.560953 CGAAGCGAGGAAAAAGAAACTGAAT 60.561 40.000 0.00 0.00 0.00 2.57
3880 4968 7.760794 TGACCATTGAATTCTTAAACATGATGC 59.239 33.333 7.05 0.00 0.00 3.91
3899 4987 1.025113 CCACTGCCAGATGCTGACTG 61.025 60.000 0.00 0.00 41.11 3.51
3904 4992 1.303799 GCCAGATGCTGACTGTGTGG 61.304 60.000 0.00 0.00 36.87 4.17
3910 4998 1.126948 TGCTGACTGTGTGGATCCCA 61.127 55.000 9.90 3.88 0.00 4.37
3911 4999 0.254178 GCTGACTGTGTGGATCCCAT 59.746 55.000 9.90 0.00 35.28 4.00
3954 5042 2.567497 GCTGGCATGGTGTGTGCTT 61.567 57.895 0.00 0.00 42.16 3.91
3964 5052 1.544686 GTGTGTGCTTTGTCAAACCG 58.455 50.000 0.00 0.00 0.00 4.44
4018 5144 8.494016 AGTTGTAGCTAATATGTTTTGTCTCC 57.506 34.615 0.00 0.00 0.00 3.71
4019 5145 7.277981 AGTTGTAGCTAATATGTTTTGTCTCCG 59.722 37.037 0.00 0.00 0.00 4.63
4021 5147 6.755141 TGTAGCTAATATGTTTTGTCTCCGTC 59.245 38.462 0.00 0.00 0.00 4.79
4027 5153 4.543590 ATGTTTTGTCTCCGTCTCTCAT 57.456 40.909 0.00 0.00 0.00 2.90
4028 5154 4.336889 TGTTTTGTCTCCGTCTCTCATT 57.663 40.909 0.00 0.00 0.00 2.57
4029 5155 4.703897 TGTTTTGTCTCCGTCTCTCATTT 58.296 39.130 0.00 0.00 0.00 2.32
4030 5156 5.123227 TGTTTTGTCTCCGTCTCTCATTTT 58.877 37.500 0.00 0.00 0.00 1.82
4031 5157 6.285224 TGTTTTGTCTCCGTCTCTCATTTTA 58.715 36.000 0.00 0.00 0.00 1.52
4032 5158 6.764085 TGTTTTGTCTCCGTCTCTCATTTTAA 59.236 34.615 0.00 0.00 0.00 1.52
4033 5159 7.281324 TGTTTTGTCTCCGTCTCTCATTTTAAA 59.719 33.333 0.00 0.00 0.00 1.52
4034 5160 7.795482 TTTGTCTCCGTCTCTCATTTTAAAA 57.205 32.000 2.51 2.51 0.00 1.52
4035 5161 7.795482 TTGTCTCCGTCTCTCATTTTAAAAA 57.205 32.000 4.44 0.00 0.00 1.94
4036 5162 7.421530 TGTCTCCGTCTCTCATTTTAAAAAG 57.578 36.000 4.44 0.26 0.00 2.27
4037 5163 6.073222 TGTCTCCGTCTCTCATTTTAAAAAGC 60.073 38.462 4.44 0.00 0.00 3.51
4038 5164 5.995282 TCTCCGTCTCTCATTTTAAAAAGCA 59.005 36.000 4.44 0.00 0.00 3.91
4039 5165 5.997385 TCCGTCTCTCATTTTAAAAAGCAC 58.003 37.500 4.44 0.00 0.00 4.40
4040 5166 5.763204 TCCGTCTCTCATTTTAAAAAGCACT 59.237 36.000 4.44 0.00 0.00 4.40
4041 5167 6.073222 TCCGTCTCTCATTTTAAAAAGCACTC 60.073 38.462 4.44 0.00 0.00 3.51
4042 5168 6.293407 CCGTCTCTCATTTTAAAAAGCACTCA 60.293 38.462 4.44 0.00 0.00 3.41
4043 5169 7.301054 CGTCTCTCATTTTAAAAAGCACTCAT 58.699 34.615 4.44 0.00 0.00 2.90
4132 5262 3.350219 TCATGAAACTAAGGCTGGACC 57.650 47.619 0.00 0.00 39.61 4.46
4166 5296 2.005451 GCAATTCGATGCAGAGACACT 58.995 47.619 6.13 0.00 45.70 3.55
4218 5348 5.814705 AGAGTTGAAATTCGATAAGCCTGAG 59.185 40.000 0.00 0.00 0.00 3.35
4316 5446 2.223923 CGGCTTAGAGATGAACTCCAGG 60.224 54.545 0.00 0.00 45.96 4.45
4321 5451 2.892425 GATGAACTCCAGGCCGCG 60.892 66.667 0.00 0.00 0.00 6.46
4322 5452 3.665675 GATGAACTCCAGGCCGCGT 62.666 63.158 4.92 0.00 0.00 6.01
4501 5631 8.506168 AGTCATGGTTATGTTATGGTTGTTAG 57.494 34.615 0.00 0.00 35.73 2.34
4502 5632 8.107095 AGTCATGGTTATGTTATGGTTGTTAGT 58.893 33.333 0.00 0.00 35.73 2.24
4503 5633 9.386010 GTCATGGTTATGTTATGGTTGTTAGTA 57.614 33.333 0.00 0.00 35.73 1.82
4558 5689 9.512435 GATTCATGTATGTTTTCATTCAAGGAG 57.488 33.333 0.00 0.00 40.07 3.69
4595 5730 4.225267 AGGCCCTAAATTATATCTGACCCG 59.775 45.833 0.00 0.00 0.00 5.28
4613 5751 6.587273 TGACCCGACATGTGAATCAATAATA 58.413 36.000 1.15 0.00 0.00 0.98
4628 5766 4.570369 TCAATAATACACACATCACCTGCG 59.430 41.667 0.00 0.00 0.00 5.18
4629 5767 1.737838 AATACACACATCACCTGCGG 58.262 50.000 0.00 0.00 0.00 5.69
4635 5773 1.608590 ACACATCACCTGCGGAAAAAG 59.391 47.619 0.00 0.00 0.00 2.27
4651 6018 6.200097 GCGGAAAAAGAAAAATGTACACATGT 59.800 34.615 0.00 0.00 36.56 3.21
4800 6167 7.937942 CGATACCACTACTATAGCCATATAGGT 59.062 40.741 0.00 2.30 43.57 3.08
4803 6170 7.246763 ACCACTACTATAGCCATATAGGTTGT 58.753 38.462 0.00 1.36 43.57 3.32
4804 6171 8.396388 ACCACTACTATAGCCATATAGGTTGTA 58.604 37.037 0.00 0.00 43.57 2.41
4869 6236 3.370840 AGCCATGGAATGTTGAGCTAA 57.629 42.857 18.40 0.00 44.81 3.09
4870 6237 3.285484 AGCCATGGAATGTTGAGCTAAG 58.715 45.455 18.40 0.00 44.81 2.18
4871 6238 2.360165 GCCATGGAATGTTGAGCTAAGG 59.640 50.000 18.40 0.00 44.81 2.69
4872 6239 2.360165 CCATGGAATGTTGAGCTAAGGC 59.640 50.000 5.56 0.00 44.81 4.35
4873 6240 2.128771 TGGAATGTTGAGCTAAGGCC 57.871 50.000 0.00 0.00 39.73 5.19
4874 6241 1.340991 TGGAATGTTGAGCTAAGGCCC 60.341 52.381 0.00 0.00 39.73 5.80
4875 6242 1.064389 GGAATGTTGAGCTAAGGCCCT 60.064 52.381 0.00 0.00 39.73 5.19
4876 6243 2.019984 GAATGTTGAGCTAAGGCCCTG 58.980 52.381 0.00 0.00 39.73 4.45
4877 6244 0.995024 ATGTTGAGCTAAGGCCCTGT 59.005 50.000 0.00 0.00 39.73 4.00
4878 6245 0.771127 TGTTGAGCTAAGGCCCTGTT 59.229 50.000 0.00 0.00 39.73 3.16
4879 6246 1.144913 TGTTGAGCTAAGGCCCTGTTT 59.855 47.619 0.00 0.00 39.73 2.83
4880 6247 1.541588 GTTGAGCTAAGGCCCTGTTTG 59.458 52.381 0.00 0.00 39.73 2.93
4881 6248 0.038166 TGAGCTAAGGCCCTGTTTGG 59.962 55.000 0.00 0.00 39.73 3.28
4882 6249 0.038310 GAGCTAAGGCCCTGTTTGGT 59.962 55.000 0.00 0.00 39.73 3.67
4883 6250 0.482887 AGCTAAGGCCCTGTTTGGTT 59.517 50.000 0.00 0.00 39.73 3.67
4884 6251 1.133167 AGCTAAGGCCCTGTTTGGTTT 60.133 47.619 0.00 0.00 39.73 3.27
4885 6252 2.109304 AGCTAAGGCCCTGTTTGGTTTA 59.891 45.455 0.00 0.00 39.73 2.01
4886 6253 3.096852 GCTAAGGCCCTGTTTGGTTTAT 58.903 45.455 0.00 0.00 0.00 1.40
4887 6254 4.017867 AGCTAAGGCCCTGTTTGGTTTATA 60.018 41.667 0.00 0.00 39.73 0.98
4888 6255 4.707934 GCTAAGGCCCTGTTTGGTTTATAA 59.292 41.667 0.00 0.00 0.00 0.98
4889 6256 5.163550 GCTAAGGCCCTGTTTGGTTTATAAG 60.164 44.000 0.00 0.00 0.00 1.73
4890 6257 4.397919 AGGCCCTGTTTGGTTTATAAGT 57.602 40.909 0.00 0.00 0.00 2.24
4891 6258 4.341487 AGGCCCTGTTTGGTTTATAAGTC 58.659 43.478 0.00 0.00 0.00 3.01
4892 6259 3.446161 GGCCCTGTTTGGTTTATAAGTCC 59.554 47.826 0.00 2.91 0.00 3.85
4893 6260 4.341487 GCCCTGTTTGGTTTATAAGTCCT 58.659 43.478 9.23 0.00 0.00 3.85
4894 6261 5.503002 GCCCTGTTTGGTTTATAAGTCCTA 58.497 41.667 9.23 1.38 0.00 2.94
4895 6262 6.127101 GCCCTGTTTGGTTTATAAGTCCTAT 58.873 40.000 9.23 0.00 0.00 2.57
4896 6263 6.039382 GCCCTGTTTGGTTTATAAGTCCTATG 59.961 42.308 9.23 0.00 0.00 2.23
4897 6264 7.343357 CCCTGTTTGGTTTATAAGTCCTATGA 58.657 38.462 9.23 0.00 0.00 2.15
4898 6265 7.282450 CCCTGTTTGGTTTATAAGTCCTATGAC 59.718 40.741 9.23 0.00 42.09 3.06
4926 6293 3.487120 AGTCCCAACTAAAAAGTCGCT 57.513 42.857 0.00 0.00 32.59 4.93
4927 6294 4.612264 AGTCCCAACTAAAAAGTCGCTA 57.388 40.909 0.00 0.00 32.59 4.26
4928 6295 4.566987 AGTCCCAACTAAAAAGTCGCTAG 58.433 43.478 0.00 0.00 32.59 3.42
4929 6296 4.040095 AGTCCCAACTAAAAAGTCGCTAGT 59.960 41.667 0.00 0.00 32.59 2.57
4930 6297 4.388165 GTCCCAACTAAAAAGTCGCTAGTC 59.612 45.833 0.00 0.00 0.00 2.59
4931 6298 3.683340 CCCAACTAAAAAGTCGCTAGTCC 59.317 47.826 0.00 0.00 0.00 3.85
4932 6299 3.683340 CCAACTAAAAAGTCGCTAGTCCC 59.317 47.826 0.00 0.00 0.00 4.46
4933 6300 4.562963 CCAACTAAAAAGTCGCTAGTCCCT 60.563 45.833 0.00 0.00 0.00 4.20
4934 6301 5.337009 CCAACTAAAAAGTCGCTAGTCCCTA 60.337 44.000 0.00 0.00 0.00 3.53
4935 6302 5.990120 ACTAAAAAGTCGCTAGTCCCTAA 57.010 39.130 0.00 0.00 0.00 2.69
4936 6303 6.350629 ACTAAAAAGTCGCTAGTCCCTAAA 57.649 37.500 0.00 0.00 0.00 1.85
4937 6304 6.762333 ACTAAAAAGTCGCTAGTCCCTAAAA 58.238 36.000 0.00 0.00 0.00 1.52
4938 6305 7.219322 ACTAAAAAGTCGCTAGTCCCTAAAAA 58.781 34.615 0.00 0.00 0.00 1.94
4939 6306 6.555812 AAAAAGTCGCTAGTCCCTAAAAAG 57.444 37.500 0.00 0.00 0.00 2.27
4940 6307 4.886496 AAGTCGCTAGTCCCTAAAAAGT 57.114 40.909 0.00 0.00 0.00 2.66
4941 6308 4.453177 AGTCGCTAGTCCCTAAAAAGTC 57.547 45.455 0.00 0.00 0.00 3.01
4942 6309 3.195182 AGTCGCTAGTCCCTAAAAAGTCC 59.805 47.826 0.00 0.00 0.00 3.85
4943 6310 3.195182 GTCGCTAGTCCCTAAAAAGTCCT 59.805 47.826 0.00 0.00 0.00 3.85
4944 6311 3.836562 TCGCTAGTCCCTAAAAAGTCCTT 59.163 43.478 0.00 0.00 0.00 3.36
4945 6312 5.018809 TCGCTAGTCCCTAAAAAGTCCTTA 58.981 41.667 0.00 0.00 0.00 2.69
4946 6313 5.105595 TCGCTAGTCCCTAAAAAGTCCTTAC 60.106 44.000 0.00 0.00 0.00 2.34
4947 6314 5.337009 CGCTAGTCCCTAAAAAGTCCTTACA 60.337 44.000 0.00 0.00 0.00 2.41
4948 6315 6.629739 CGCTAGTCCCTAAAAAGTCCTTACAT 60.630 42.308 0.00 0.00 0.00 2.29
4949 6316 6.539103 GCTAGTCCCTAAAAAGTCCTTACATG 59.461 42.308 0.00 0.00 0.00 3.21
4950 6317 6.449830 AGTCCCTAAAAAGTCCTTACATGT 57.550 37.500 2.69 2.69 0.00 3.21
4951 6318 6.849151 AGTCCCTAAAAAGTCCTTACATGTT 58.151 36.000 2.30 0.00 0.00 2.71
4952 6319 7.295340 AGTCCCTAAAAAGTCCTTACATGTTT 58.705 34.615 2.30 0.00 0.00 2.83
4953 6320 7.230712 AGTCCCTAAAAAGTCCTTACATGTTTG 59.769 37.037 2.30 0.00 0.00 2.93
4954 6321 6.492087 TCCCTAAAAAGTCCTTACATGTTTGG 59.508 38.462 2.30 7.09 0.00 3.28
4955 6322 6.266786 CCCTAAAAAGTCCTTACATGTTTGGT 59.733 38.462 2.30 0.00 0.00 3.67
4956 6323 7.201965 CCCTAAAAAGTCCTTACATGTTTGGTT 60.202 37.037 2.30 0.00 0.00 3.67
4957 6324 7.865889 CCTAAAAAGTCCTTACATGTTTGGTTC 59.134 37.037 2.30 5.39 0.00 3.62
4958 6325 5.784578 AAAGTCCTTACATGTTTGGTTCC 57.215 39.130 2.30 0.60 0.00 3.62
4959 6326 4.724279 AGTCCTTACATGTTTGGTTCCT 57.276 40.909 2.30 2.76 0.00 3.36
4960 6327 4.398319 AGTCCTTACATGTTTGGTTCCTG 58.602 43.478 2.30 0.00 0.00 3.86
4961 6328 3.506067 GTCCTTACATGTTTGGTTCCTGG 59.494 47.826 2.30 0.00 0.00 4.45
4962 6329 2.825532 CCTTACATGTTTGGTTCCTGGG 59.174 50.000 2.30 0.00 0.00 4.45
4963 6330 3.499563 CCTTACATGTTTGGTTCCTGGGA 60.500 47.826 2.30 0.00 0.00 4.37
4964 6331 1.995376 ACATGTTTGGTTCCTGGGAC 58.005 50.000 0.00 0.00 0.00 4.46
4965 6332 1.499007 ACATGTTTGGTTCCTGGGACT 59.501 47.619 4.84 0.00 0.00 3.85
4966 6333 2.714250 ACATGTTTGGTTCCTGGGACTA 59.286 45.455 4.84 0.00 0.00 2.59
4967 6334 3.139397 ACATGTTTGGTTCCTGGGACTAA 59.861 43.478 4.84 1.82 0.00 2.24
4968 6335 3.955524 TGTTTGGTTCCTGGGACTAAA 57.044 42.857 12.20 12.20 0.00 1.85
4969 6336 3.558033 TGTTTGGTTCCTGGGACTAAAC 58.442 45.455 30.00 30.00 0.00 2.01
4970 6337 3.053544 TGTTTGGTTCCTGGGACTAAACA 60.054 43.478 33.44 33.44 33.35 2.83
4971 6338 4.149598 GTTTGGTTCCTGGGACTAAACAT 58.850 43.478 31.06 0.00 0.00 2.71
4972 6339 3.433306 TGGTTCCTGGGACTAAACATG 57.567 47.619 4.84 0.00 0.00 3.21
4973 6340 2.983192 TGGTTCCTGGGACTAAACATGA 59.017 45.455 4.84 0.00 0.00 3.07
4974 6341 3.396276 TGGTTCCTGGGACTAAACATGAA 59.604 43.478 4.84 0.00 0.00 2.57
4975 6342 3.756963 GGTTCCTGGGACTAAACATGAAC 59.243 47.826 4.84 0.00 39.75 3.18
4976 6343 4.506802 GGTTCCTGGGACTAAACATGAACT 60.507 45.833 4.84 0.00 40.10 3.01
4977 6344 5.280317 GGTTCCTGGGACTAAACATGAACTA 60.280 44.000 4.84 0.00 40.10 2.24
4978 6345 6.235664 GTTCCTGGGACTAAACATGAACTAA 58.764 40.000 0.00 0.00 38.42 2.24
4979 6346 6.442541 TCCTGGGACTAAACATGAACTAAA 57.557 37.500 0.00 0.00 0.00 1.85
4980 6347 6.843752 TCCTGGGACTAAACATGAACTAAAA 58.156 36.000 0.00 0.00 0.00 1.52
4981 6348 6.940298 TCCTGGGACTAAACATGAACTAAAAG 59.060 38.462 0.00 0.00 0.00 2.27
4982 6349 6.940298 CCTGGGACTAAACATGAACTAAAAGA 59.060 38.462 0.00 0.00 0.00 2.52
4983 6350 7.094762 CCTGGGACTAAACATGAACTAAAAGAC 60.095 40.741 0.00 0.00 0.00 3.01
4984 6351 6.713450 TGGGACTAAACATGAACTAAAAGACC 59.287 38.462 0.00 0.00 0.00 3.85
4985 6352 6.150641 GGGACTAAACATGAACTAAAAGACCC 59.849 42.308 0.00 2.68 32.17 4.46
4986 6353 6.150641 GGACTAAACATGAACTAAAAGACCCC 59.849 42.308 0.00 0.00 0.00 4.95
4987 6354 6.607019 ACTAAACATGAACTAAAAGACCCCA 58.393 36.000 0.00 0.00 0.00 4.96
4988 6355 7.064229 ACTAAACATGAACTAAAAGACCCCAA 58.936 34.615 0.00 0.00 0.00 4.12
4989 6356 6.800072 AAACATGAACTAAAAGACCCCAAA 57.200 33.333 0.00 0.00 0.00 3.28
4990 6357 6.800072 AACATGAACTAAAAGACCCCAAAA 57.200 33.333 0.00 0.00 0.00 2.44
4991 6358 6.800072 ACATGAACTAAAAGACCCCAAAAA 57.200 33.333 0.00 0.00 0.00 1.94
5008 6375 2.424684 AAAACTCTCCCTCAGGGTCT 57.575 50.000 10.50 0.00 44.74 3.85
5009 6376 2.424684 AAACTCTCCCTCAGGGTCTT 57.575 50.000 10.50 0.00 44.74 3.01
5010 6377 1.945580 AACTCTCCCTCAGGGTCTTC 58.054 55.000 10.50 0.00 44.74 2.87
5011 6378 1.089123 ACTCTCCCTCAGGGTCTTCT 58.911 55.000 10.50 0.00 44.74 2.85
5012 6379 1.435168 ACTCTCCCTCAGGGTCTTCTT 59.565 52.381 10.50 0.00 44.74 2.52
5013 6380 2.158081 ACTCTCCCTCAGGGTCTTCTTT 60.158 50.000 10.50 0.00 44.74 2.52
5014 6381 2.499693 CTCTCCCTCAGGGTCTTCTTTC 59.500 54.545 10.50 0.00 44.74 2.62
5015 6382 2.158158 TCTCCCTCAGGGTCTTCTTTCA 60.158 50.000 10.50 0.00 44.74 2.69
5016 6383 2.843113 CTCCCTCAGGGTCTTCTTTCAT 59.157 50.000 10.50 0.00 44.74 2.57
5017 6384 4.033709 CTCCCTCAGGGTCTTCTTTCATA 58.966 47.826 10.50 0.00 44.74 2.15
5018 6385 4.435137 TCCCTCAGGGTCTTCTTTCATAA 58.565 43.478 10.50 0.00 44.74 1.90
5019 6386 4.849810 TCCCTCAGGGTCTTCTTTCATAAA 59.150 41.667 10.50 0.00 44.74 1.40
5020 6387 5.492524 TCCCTCAGGGTCTTCTTTCATAAAT 59.507 40.000 10.50 0.00 44.74 1.40
5021 6388 5.825151 CCCTCAGGGTCTTCTTTCATAAATC 59.175 44.000 0.00 0.00 38.25 2.17
5022 6389 6.353429 CCCTCAGGGTCTTCTTTCATAAATCT 60.353 42.308 0.00 0.00 38.25 2.40
5023 6390 6.765512 CCTCAGGGTCTTCTTTCATAAATCTC 59.234 42.308 0.00 0.00 0.00 2.75
5024 6391 7.257790 TCAGGGTCTTCTTTCATAAATCTCA 57.742 36.000 0.00 0.00 0.00 3.27
5025 6392 7.689299 TCAGGGTCTTCTTTCATAAATCTCAA 58.311 34.615 0.00 0.00 0.00 3.02
5026 6393 8.163408 TCAGGGTCTTCTTTCATAAATCTCAAA 58.837 33.333 0.00 0.00 0.00 2.69
5027 6394 8.964772 CAGGGTCTTCTTTCATAAATCTCAAAT 58.035 33.333 0.00 0.00 0.00 2.32
5028 6395 8.964772 AGGGTCTTCTTTCATAAATCTCAAATG 58.035 33.333 0.00 0.00 0.00 2.32
5029 6396 8.960591 GGGTCTTCTTTCATAAATCTCAAATGA 58.039 33.333 0.00 0.00 0.00 2.57
5030 6397 9.780413 GGTCTTCTTTCATAAATCTCAAATGAC 57.220 33.333 0.00 0.00 29.64 3.06
5031 6398 9.780413 GTCTTCTTTCATAAATCTCAAATGACC 57.220 33.333 0.00 0.00 29.64 4.02
5032 6399 9.519191 TCTTCTTTCATAAATCTCAAATGACCA 57.481 29.630 0.00 0.00 29.64 4.02
5033 6400 9.565213 CTTCTTTCATAAATCTCAAATGACCAC 57.435 33.333 0.00 0.00 29.64 4.16
5034 6401 8.868522 TCTTTCATAAATCTCAAATGACCACT 57.131 30.769 0.00 0.00 29.64 4.00
5035 6402 9.300681 TCTTTCATAAATCTCAAATGACCACTT 57.699 29.630 0.00 0.00 29.64 3.16
5036 6403 9.918630 CTTTCATAAATCTCAAATGACCACTTT 57.081 29.630 0.00 0.00 29.64 2.66
5042 6409 7.454260 AATCTCAAATGACCACTTTAAGTCC 57.546 36.000 0.00 0.00 31.76 3.85
5043 6410 5.313712 TCTCAAATGACCACTTTAAGTCCC 58.686 41.667 0.00 0.00 31.76 4.46
5044 6411 5.073144 TCTCAAATGACCACTTTAAGTCCCT 59.927 40.000 0.00 0.00 31.76 4.20
5045 6412 5.313712 TCAAATGACCACTTTAAGTCCCTC 58.686 41.667 0.00 0.00 31.76 4.30
5046 6413 4.302559 AATGACCACTTTAAGTCCCTCC 57.697 45.455 0.00 0.00 31.76 4.30
5047 6414 2.986050 TGACCACTTTAAGTCCCTCCT 58.014 47.619 0.00 0.00 31.76 3.69
5048 6415 2.637872 TGACCACTTTAAGTCCCTCCTG 59.362 50.000 0.00 0.00 31.76 3.86
5049 6416 2.638363 GACCACTTTAAGTCCCTCCTGT 59.362 50.000 0.00 0.00 0.00 4.00
5050 6417 3.053826 ACCACTTTAAGTCCCTCCTGTT 58.946 45.455 0.00 0.00 0.00 3.16
5051 6418 3.462205 ACCACTTTAAGTCCCTCCTGTTT 59.538 43.478 0.00 0.00 0.00 2.83
5052 6419 4.661709 ACCACTTTAAGTCCCTCCTGTTTA 59.338 41.667 0.00 0.00 0.00 2.01
5053 6420 5.221864 ACCACTTTAAGTCCCTCCTGTTTAG 60.222 44.000 0.00 0.00 0.00 1.85
5054 6421 5.221864 CCACTTTAAGTCCCTCCTGTTTAGT 60.222 44.000 0.00 0.00 0.00 2.24
5055 6422 6.296803 CACTTTAAGTCCCTCCTGTTTAGTT 58.703 40.000 0.00 0.00 0.00 2.24
5056 6423 6.771267 CACTTTAAGTCCCTCCTGTTTAGTTT 59.229 38.462 0.00 0.00 0.00 2.66
5057 6424 7.935210 CACTTTAAGTCCCTCCTGTTTAGTTTA 59.065 37.037 0.00 0.00 0.00 2.01
5058 6425 8.155510 ACTTTAAGTCCCTCCTGTTTAGTTTAG 58.844 37.037 0.00 0.00 0.00 1.85
5059 6426 7.860649 TTAAGTCCCTCCTGTTTAGTTTAGA 57.139 36.000 0.00 0.00 0.00 2.10
5060 6427 6.954352 AAGTCCCTCCTGTTTAGTTTAGAT 57.046 37.500 0.00 0.00 0.00 1.98
5061 6428 6.301169 AGTCCCTCCTGTTTAGTTTAGATG 57.699 41.667 0.00 0.00 0.00 2.90
5062 6429 5.189934 AGTCCCTCCTGTTTAGTTTAGATGG 59.810 44.000 0.00 0.00 0.00 3.51
5063 6430 4.473559 TCCCTCCTGTTTAGTTTAGATGGG 59.526 45.833 0.00 0.00 0.00 4.00
5064 6431 4.473559 CCCTCCTGTTTAGTTTAGATGGGA 59.526 45.833 0.00 0.00 31.98 4.37
5065 6432 5.429130 CCTCCTGTTTAGTTTAGATGGGAC 58.571 45.833 0.00 0.00 0.00 4.46
5066 6433 5.189934 CCTCCTGTTTAGTTTAGATGGGACT 59.810 44.000 0.00 0.00 0.00 3.85
5067 6434 6.383147 CCTCCTGTTTAGTTTAGATGGGACTA 59.617 42.308 0.00 0.00 0.00 2.59
5068 6435 7.093024 CCTCCTGTTTAGTTTAGATGGGACTAA 60.093 40.741 0.00 0.00 34.91 2.24
5069 6436 8.209802 TCCTGTTTAGTTTAGATGGGACTAAA 57.790 34.615 4.36 4.36 41.18 1.85
5070 6437 8.662255 TCCTGTTTAGTTTAGATGGGACTAAAA 58.338 33.333 8.87 1.89 43.47 1.52
5071 6438 8.947115 CCTGTTTAGTTTAGATGGGACTAAAAG 58.053 37.037 8.87 8.73 43.47 2.27
5072 6439 8.857694 TGTTTAGTTTAGATGGGACTAAAAGG 57.142 34.615 8.87 0.00 43.47 3.11
5073 6440 7.886446 TGTTTAGTTTAGATGGGACTAAAAGGG 59.114 37.037 8.87 0.00 43.47 3.95
5074 6441 7.817910 TTAGTTTAGATGGGACTAAAAGGGA 57.182 36.000 0.00 0.00 41.77 4.20
5075 6442 6.063496 AGTTTAGATGGGACTAAAAGGGAC 57.937 41.667 0.00 0.00 41.77 4.46
5076 6443 5.791141 AGTTTAGATGGGACTAAAAGGGACT 59.209 40.000 0.00 0.00 41.77 3.85
5102 6469 6.453926 TTTAAGTCCCTGTAAACAAACACC 57.546 37.500 0.00 0.00 0.00 4.16
5103 6470 2.940158 AGTCCCTGTAAACAAACACCC 58.060 47.619 0.00 0.00 0.00 4.61
5104 6471 1.958579 GTCCCTGTAAACAAACACCCC 59.041 52.381 0.00 0.00 0.00 4.95
5105 6472 1.133419 TCCCTGTAAACAAACACCCCC 60.133 52.381 0.00 0.00 0.00 5.40
5106 6473 1.133294 CCCTGTAAACAAACACCCCCT 60.133 52.381 0.00 0.00 0.00 4.79
5107 6474 2.108601 CCCTGTAAACAAACACCCCCTA 59.891 50.000 0.00 0.00 0.00 3.53
5111 6478 4.869451 TGTAAACAAACACCCCCTAACTT 58.131 39.130 0.00 0.00 0.00 2.66
5169 6536 3.527253 TGTTGATCCAGACACCCCATAAT 59.473 43.478 0.00 0.00 0.00 1.28
5222 6589 8.530269 AAATTCAAGTGCTCAAATGAATTCTC 57.470 30.769 18.78 0.00 46.32 2.87
5230 6597 4.325472 GCTCAAATGAATTCTCGCCAAAAG 59.675 41.667 7.05 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
288 294 6.854578 TCCCTGGGTTTTCTAGTTTTCAATA 58.145 36.000 13.56 0.00 0.00 1.90
298 304 4.211920 CTGTTTGTTCCCTGGGTTTTCTA 58.788 43.478 13.56 0.00 0.00 2.10
326 332 5.476945 ACATTTCTTGTAACATTCCAGGGAC 59.523 40.000 0.00 0.00 36.57 4.46
383 389 3.368739 GCGGTTAGGTTCCTGCTAAACTA 60.369 47.826 1.12 0.00 0.00 2.24
428 434 1.890625 CGGATCCGTTGGGTGGTGTA 61.891 60.000 26.35 0.00 34.35 2.90
480 486 6.367422 CCAATGTTCACTTCAACTAGAGAGAC 59.633 42.308 0.00 0.00 0.00 3.36
482 488 6.226787 ACCAATGTTCACTTCAACTAGAGAG 58.773 40.000 0.00 0.00 0.00 3.20
498 504 1.906333 GGGACGGCCAACCAATGTT 60.906 57.895 11.00 0.00 34.57 2.71
504 510 1.101049 CACATATGGGACGGCCAACC 61.101 60.000 11.00 4.91 35.15 3.77
505 511 1.724582 GCACATATGGGACGGCCAAC 61.725 60.000 11.00 0.00 35.15 3.77
528 534 4.634004 TCATTAACATCTAGTGGGCAAACG 59.366 41.667 0.00 0.00 0.00 3.60
535 541 8.188799 TCTACGTTCTTCATTAACATCTAGTGG 58.811 37.037 0.00 0.00 0.00 4.00
557 563 4.399934 ACCTCGGATCTTCAAGAGTTCTAC 59.600 45.833 0.00 0.00 0.00 2.59
623 629 1.270550 CGCAGCTGGAGAAATTTTGGT 59.729 47.619 17.12 0.00 0.00 3.67
663 669 2.443632 TGGTGTAGGGTTTCCACATGAA 59.556 45.455 0.00 0.00 34.83 2.57
744 754 1.621814 CCCCTGTCACTCGGTTTCTAA 59.378 52.381 0.00 0.00 0.00 2.10
769 783 2.095461 CTGACTGAGTTCCGGATCTCA 58.905 52.381 32.96 32.96 38.20 3.27
784 798 3.648545 ACTACTTCTTTTCCTGGCTGACT 59.351 43.478 0.00 0.00 0.00 3.41
785 799 4.009370 ACTACTTCTTTTCCTGGCTGAC 57.991 45.455 0.00 0.00 0.00 3.51
786 800 4.591498 TGTACTACTTCTTTTCCTGGCTGA 59.409 41.667 0.00 0.00 0.00 4.26
787 801 4.894784 TGTACTACTTCTTTTCCTGGCTG 58.105 43.478 0.00 0.00 0.00 4.85
788 802 5.491982 CATGTACTACTTCTTTTCCTGGCT 58.508 41.667 0.00 0.00 0.00 4.75
807 821 1.338337 CGACTAGGATCTTCGGCATGT 59.662 52.381 0.00 0.00 0.00 3.21
827 843 2.845752 TACGGCGATGTGGGCTTGTC 62.846 60.000 16.62 0.00 0.00 3.18
833 849 2.106332 GGAGTACGGCGATGTGGG 59.894 66.667 16.62 0.00 0.00 4.61
901 923 2.067932 CTGGACAGCAACTGGGGGAA 62.068 60.000 0.00 0.00 35.51 3.97
1276 1298 3.066342 ACGTCGTCTCAAAACTGAGAAGA 59.934 43.478 14.23 14.23 45.97 2.87
1279 1301 2.543031 CCACGTCGTCTCAAAACTGAGA 60.543 50.000 0.00 0.68 42.09 3.27
1318 1341 3.706373 GCGACTTCCCCTCCTGCA 61.706 66.667 0.00 0.00 0.00 4.41
1624 1647 4.991153 TGCATTGGCGTTTTAATATCCA 57.009 36.364 0.00 0.00 45.35 3.41
1654 1677 3.653539 TTACAGAAGCGAGTACTGCAA 57.346 42.857 16.27 2.32 35.38 4.08
1655 1678 3.868757 ATTACAGAAGCGAGTACTGCA 57.131 42.857 16.27 0.00 35.38 4.41
1659 1682 5.402867 GCCAGATAATTACAGAAGCGAGTAC 59.597 44.000 0.00 0.00 0.00 2.73
1660 1683 5.302059 AGCCAGATAATTACAGAAGCGAGTA 59.698 40.000 0.00 0.00 0.00 2.59
1700 1723 4.419282 AGAATTTCCCCAGCTGAATTTCA 58.581 39.130 17.39 0.00 35.82 2.69
1701 1724 4.142071 GGAGAATTTCCCCAGCTGAATTTC 60.142 45.833 17.39 13.07 40.37 2.17
1702 1725 3.771479 GGAGAATTTCCCCAGCTGAATTT 59.229 43.478 17.39 4.42 40.37 1.82
1703 1726 3.369175 GGAGAATTTCCCCAGCTGAATT 58.631 45.455 17.39 12.97 40.37 2.17
1704 1727 3.023939 GGAGAATTTCCCCAGCTGAAT 57.976 47.619 17.39 3.65 40.37 2.57
1705 1728 2.514458 GGAGAATTTCCCCAGCTGAA 57.486 50.000 17.39 0.80 40.37 3.02
1728 1765 4.095036 TGTTGTTGTTGTAATGTTCAGCGA 59.905 37.500 0.00 0.00 0.00 4.93
1767 1804 5.405935 AGCCTATCCCAATTTGTTTGAAC 57.594 39.130 0.00 0.00 37.53 3.18
1769 1806 5.200483 CCTAGCCTATCCCAATTTGTTTGA 58.800 41.667 0.00 0.00 37.53 2.69
1771 1808 4.546674 CCCTAGCCTATCCCAATTTGTTT 58.453 43.478 0.00 0.00 0.00 2.83
1774 1811 2.108952 AGCCCTAGCCTATCCCAATTTG 59.891 50.000 0.00 0.00 41.25 2.32
1775 1812 2.108952 CAGCCCTAGCCTATCCCAATTT 59.891 50.000 0.00 0.00 41.25 1.82
1783 1821 1.141185 GGGTTTCAGCCCTAGCCTAT 58.859 55.000 0.00 0.00 45.22 2.57
1792 1830 2.552031 GAGATCTTACGGGTTTCAGCC 58.448 52.381 0.00 0.00 0.00 4.85
1885 1923 1.997606 ACAACTCGCAAGTATTACCGC 59.002 47.619 0.00 0.00 33.48 5.68
1886 1924 3.060363 GTCACAACTCGCAAGTATTACCG 59.940 47.826 0.00 0.00 33.48 4.02
1920 1958 4.165180 TGGGCAGGCACTATAAATGAAGTA 59.835 41.667 0.00 0.00 36.02 2.24
1961 2622 0.242825 GCTTGCACTGCATGACATGT 59.757 50.000 18.59 0.00 38.76 3.21
2113 3148 4.025401 CTTTGACCACCGCGCACC 62.025 66.667 8.75 0.00 0.00 5.01
2114 3149 1.017177 TATCTTTGACCACCGCGCAC 61.017 55.000 8.75 0.00 0.00 5.34
2115 3150 0.739462 CTATCTTTGACCACCGCGCA 60.739 55.000 8.75 0.00 0.00 6.09
2116 3151 2.006772 CTATCTTTGACCACCGCGC 58.993 57.895 0.00 0.00 0.00 6.86
2117 3152 1.429148 GGCTATCTTTGACCACCGCG 61.429 60.000 0.00 0.00 0.00 6.46
2118 3153 1.095807 GGGCTATCTTTGACCACCGC 61.096 60.000 0.00 0.00 31.53 5.68
2119 3154 0.463833 GGGGCTATCTTTGACCACCG 60.464 60.000 0.00 0.00 33.26 4.94
2120 3155 0.623723 TGGGGCTATCTTTGACCACC 59.376 55.000 0.00 0.00 33.26 4.61
2121 3156 2.019156 GCTGGGGCTATCTTTGACCAC 61.019 57.143 0.00 0.00 33.26 4.16
2122 3157 0.255890 GCTGGGGCTATCTTTGACCA 59.744 55.000 0.00 0.00 33.26 4.02
2123 3158 0.466372 GGCTGGGGCTATCTTTGACC 60.466 60.000 0.00 0.00 38.73 4.02
2124 3159 0.548510 AGGCTGGGGCTATCTTTGAC 59.451 55.000 0.00 0.00 36.44 3.18
2125 3160 0.839946 GAGGCTGGGGCTATCTTTGA 59.160 55.000 0.00 0.00 38.98 2.69
2126 3161 0.548031 TGAGGCTGGGGCTATCTTTG 59.452 55.000 0.00 0.00 38.98 2.77
2127 3162 0.548510 GTGAGGCTGGGGCTATCTTT 59.451 55.000 0.00 0.00 38.98 2.52
2128 3163 1.348775 GGTGAGGCTGGGGCTATCTT 61.349 60.000 0.00 0.00 38.98 2.40
2129 3164 1.768077 GGTGAGGCTGGGGCTATCT 60.768 63.158 0.00 0.00 38.98 1.98
2130 3165 2.823758 GGGTGAGGCTGGGGCTATC 61.824 68.421 0.00 0.00 38.98 2.08
2131 3166 2.774351 GGGTGAGGCTGGGGCTAT 60.774 66.667 0.00 0.00 38.98 2.97
2142 3177 4.570663 GATCGACGCGGGGGTGAG 62.571 72.222 12.47 0.00 0.00 3.51
2284 3321 1.687996 GGGAGAGAAGGAGAGACCCAG 60.688 61.905 0.00 0.00 40.05 4.45
2285 3322 0.336737 GGGAGAGAAGGAGAGACCCA 59.663 60.000 0.00 0.00 40.05 4.51
2368 3405 4.394712 CTCCACACGCCAGGGGTC 62.395 72.222 6.08 0.00 0.00 4.46
2390 3427 4.329545 TGCAGGACCCGACAAGCC 62.330 66.667 0.00 0.00 0.00 4.35
2391 3428 2.743928 CTGCAGGACCCGACAAGC 60.744 66.667 5.57 0.00 0.00 4.01
2392 3429 2.743928 GCTGCAGGACCCGACAAG 60.744 66.667 17.12 0.00 0.00 3.16
2393 3430 4.680237 CGCTGCAGGACCCGACAA 62.680 66.667 17.12 0.00 0.00 3.18
2537 3580 1.139654 CACAGTCGATCCATCCACCAT 59.860 52.381 0.00 0.00 0.00 3.55
2755 3801 2.039818 AGAGCTTCTCCACGACGATA 57.960 50.000 0.00 0.00 0.00 2.92
2806 3852 4.217767 CCGTCATCCAATCGACCTATCTAA 59.782 45.833 0.00 0.00 0.00 2.10
2812 3858 1.144057 GCCGTCATCCAATCGACCT 59.856 57.895 0.00 0.00 0.00 3.85
2861 3911 5.805751 GCCTATGCATACCTCCAAGAATGAT 60.806 44.000 1.16 0.00 37.47 2.45
2887 3937 2.283966 CCGTCCACTGGTCCCTCT 60.284 66.667 0.00 0.00 0.00 3.69
2908 3958 4.555709 AACACCGCTCCACCGCAA 62.556 61.111 0.00 0.00 0.00 4.85
2979 4029 1.018752 CCATCACACATTCGTCGCCA 61.019 55.000 0.00 0.00 0.00 5.69
2987 4037 0.250684 TGCGTCCACCATCACACATT 60.251 50.000 0.00 0.00 0.00 2.71
2998 4048 2.181021 CTCCCTACGTGCGTCCAC 59.819 66.667 0.00 0.00 38.62 4.02
3006 4056 0.178941 ACAACACCTCCTCCCTACGT 60.179 55.000 0.00 0.00 0.00 3.57
3074 4124 3.998099 TCCATCTTCAGAGCAGATACG 57.002 47.619 0.00 0.00 29.36 3.06
3131 4183 2.561037 GGGCACAAACCGGTCCAAG 61.561 63.158 8.04 0.01 0.00 3.61
3133 4185 4.589675 GGGGCACAAACCGGTCCA 62.590 66.667 8.04 0.00 0.00 4.02
3201 4259 2.679930 CGAATACCCAAACCTCTCACCC 60.680 54.545 0.00 0.00 0.00 4.61
3272 4330 1.041447 GCAGCTGGGATCTTGGCAAT 61.041 55.000 17.12 0.00 0.00 3.56
3297 4355 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
3298 4356 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.000 0.00 0.00 36.73 5.73
3299 4357 0.999712 TGAAAAGGAGGATGACCCCC 59.000 55.000 0.00 0.00 36.73 5.40
3300 4358 2.899303 TTGAAAAGGAGGATGACCCC 57.101 50.000 0.00 0.00 36.73 4.95
3301 4359 6.850752 TTATTTTGAAAAGGAGGATGACCC 57.149 37.500 0.00 0.00 36.73 4.46
3320 4378 8.400186 GCATGCCTTTGCTGATTTTATTTTATT 58.600 29.630 6.36 0.00 39.57 1.40
3321 4379 7.553402 TGCATGCCTTTGCTGATTTTATTTTAT 59.447 29.630 16.68 0.00 43.18 1.40
3322 4380 6.877855 TGCATGCCTTTGCTGATTTTATTTTA 59.122 30.769 16.68 0.00 43.18 1.52
3323 4381 5.706369 TGCATGCCTTTGCTGATTTTATTTT 59.294 32.000 16.68 0.00 43.18 1.82
3324 4382 5.122711 GTGCATGCCTTTGCTGATTTTATTT 59.877 36.000 16.68 0.00 43.18 1.40
3325 4383 4.632688 GTGCATGCCTTTGCTGATTTTATT 59.367 37.500 16.68 0.00 43.18 1.40
3326 4384 4.081309 AGTGCATGCCTTTGCTGATTTTAT 60.081 37.500 16.68 0.00 43.18 1.40
3327 4385 3.258872 AGTGCATGCCTTTGCTGATTTTA 59.741 39.130 16.68 0.00 43.18 1.52
3328 4386 2.038033 AGTGCATGCCTTTGCTGATTTT 59.962 40.909 16.68 0.00 43.18 1.82
3329 4387 1.621814 AGTGCATGCCTTTGCTGATTT 59.378 42.857 16.68 0.00 43.18 2.17
3330 4388 1.263356 AGTGCATGCCTTTGCTGATT 58.737 45.000 16.68 0.00 43.18 2.57
3331 4389 1.203994 GAAGTGCATGCCTTTGCTGAT 59.796 47.619 16.68 0.00 43.18 2.90
3332 4390 0.599558 GAAGTGCATGCCTTTGCTGA 59.400 50.000 16.68 0.00 43.18 4.26
3333 4391 0.315886 TGAAGTGCATGCCTTTGCTG 59.684 50.000 16.68 0.00 43.18 4.41
3334 4392 1.042229 TTGAAGTGCATGCCTTTGCT 58.958 45.000 16.68 2.66 43.18 3.91
3335 4393 1.868469 TTTGAAGTGCATGCCTTTGC 58.132 45.000 16.68 7.76 43.07 3.68
3336 4394 4.273969 ACAATTTTGAAGTGCATGCCTTTG 59.726 37.500 16.68 13.15 0.00 2.77
3337 4395 4.453751 ACAATTTTGAAGTGCATGCCTTT 58.546 34.783 16.68 9.46 0.00 3.11
3338 4396 4.075963 ACAATTTTGAAGTGCATGCCTT 57.924 36.364 16.68 17.38 0.00 4.35
3339 4397 3.756933 ACAATTTTGAAGTGCATGCCT 57.243 38.095 16.68 9.12 0.00 4.75
3340 4398 4.931002 ACATACAATTTTGAAGTGCATGCC 59.069 37.500 16.68 6.65 34.49 4.40
3341 4399 6.254157 CCTACATACAATTTTGAAGTGCATGC 59.746 38.462 11.82 11.82 34.49 4.06
3342 4400 7.315142 ACCTACATACAATTTTGAAGTGCATG 58.685 34.615 0.00 0.00 36.56 4.06
3343 4401 7.466746 ACCTACATACAATTTTGAAGTGCAT 57.533 32.000 0.00 0.00 0.00 3.96
3344 4402 6.892658 ACCTACATACAATTTTGAAGTGCA 57.107 33.333 0.00 0.00 0.00 4.57
3345 4403 7.145323 ACAACCTACATACAATTTTGAAGTGC 58.855 34.615 0.00 0.00 0.00 4.40
3355 4413 6.932400 TCTTTCGTCAACAACCTACATACAAT 59.068 34.615 0.00 0.00 0.00 2.71
3356 4414 6.282167 TCTTTCGTCAACAACCTACATACAA 58.718 36.000 0.00 0.00 0.00 2.41
3407 4465 1.270274 GCACTGCATGAATGTGAACCA 59.730 47.619 14.45 0.00 33.95 3.67
3414 4472 0.458669 GGAAGGGCACTGCATGAATG 59.541 55.000 0.00 0.00 0.00 2.67
3448 4506 9.224267 GGCATATCTACACATGTCAATTCTTAT 57.776 33.333 0.00 0.00 0.00 1.73
3449 4507 8.210265 TGGCATATCTACACATGTCAATTCTTA 58.790 33.333 0.00 0.00 34.00 2.10
3460 4518 4.672587 AACTCGTGGCATATCTACACAT 57.327 40.909 0.00 0.00 34.91 3.21
3464 4522 6.755141 TCAAACTTAACTCGTGGCATATCTAC 59.245 38.462 0.00 0.00 0.00 2.59
3512 4570 5.923204 ACTAGAGCTTCCATGTAAGATTGG 58.077 41.667 1.61 0.00 0.00 3.16
3532 4609 8.768397 ACTTATTGAAATACATGTCCTGGACTA 58.232 33.333 26.03 13.79 33.15 2.59
3558 4643 9.859427 GATCCTGATGAAAATTTGTAAATGTGA 57.141 29.630 0.00 0.00 0.00 3.58
3567 4652 8.821147 TGAAACAAGATCCTGATGAAAATTTG 57.179 30.769 0.00 0.00 0.00 2.32
3719 4807 9.027202 GGGGGTGACTAAAAACAAGAAAATATA 57.973 33.333 0.00 0.00 0.00 0.86
3764 4852 2.093500 TGCAAGCAACTCGTATCCAGAT 60.093 45.455 0.00 0.00 0.00 2.90
3773 4861 1.159285 TCAGGAATGCAAGCAACTCG 58.841 50.000 0.00 0.00 0.00 4.18
3778 4866 4.705991 TCAATATGTTCAGGAATGCAAGCA 59.294 37.500 0.00 0.00 0.00 3.91
3853 4941 9.297586 CATCATGTTTAAGAATTCAATGGTCAG 57.702 33.333 8.44 0.00 0.00 3.51
3899 4987 4.057432 CAACAAAACAATGGGATCCACAC 58.943 43.478 15.23 0.00 35.80 3.82
3904 4992 5.406175 CACACATCAACAAAACAATGGGATC 59.594 40.000 0.00 0.00 0.00 3.36
3910 4998 5.686841 CGACATCACACATCAACAAAACAAT 59.313 36.000 0.00 0.00 0.00 2.71
3911 4999 5.033507 CGACATCACACATCAACAAAACAA 58.966 37.500 0.00 0.00 0.00 2.83
3999 5125 5.978814 AGACGGAGACAAAACATATTAGCT 58.021 37.500 0.00 0.00 0.00 3.32
4005 5131 5.661056 ATGAGAGACGGAGACAAAACATA 57.339 39.130 0.00 0.00 0.00 2.29
4007 5133 4.336889 AATGAGAGACGGAGACAAAACA 57.663 40.909 0.00 0.00 0.00 2.83
4008 5134 5.674933 AAAATGAGAGACGGAGACAAAAC 57.325 39.130 0.00 0.00 0.00 2.43
4009 5135 7.795482 TTTAAAATGAGAGACGGAGACAAAA 57.205 32.000 0.00 0.00 0.00 2.44
4011 5137 7.519970 GCTTTTTAAAATGAGAGACGGAGACAA 60.520 37.037 15.85 0.00 0.00 3.18
4012 5138 6.073222 GCTTTTTAAAATGAGAGACGGAGACA 60.073 38.462 15.85 0.00 0.00 3.41
4013 5139 6.073222 TGCTTTTTAAAATGAGAGACGGAGAC 60.073 38.462 15.85 0.00 0.00 3.36
4018 5144 6.658831 TGAGTGCTTTTTAAAATGAGAGACG 58.341 36.000 15.85 0.00 0.00 4.18
4019 5145 9.468532 AAATGAGTGCTTTTTAAAATGAGAGAC 57.531 29.630 15.85 6.21 0.00 3.36
4032 5158 8.487176 CGTATGCTTTTTAAAATGAGTGCTTTT 58.513 29.630 15.85 0.00 0.00 2.27
4033 5159 7.651704 ACGTATGCTTTTTAAAATGAGTGCTTT 59.348 29.630 15.85 5.45 0.00 3.51
4034 5160 7.114811 CACGTATGCTTTTTAAAATGAGTGCTT 59.885 33.333 15.85 9.55 0.00 3.91
4035 5161 6.582295 CACGTATGCTTTTTAAAATGAGTGCT 59.418 34.615 15.85 0.00 0.00 4.40
4036 5162 6.741500 CACGTATGCTTTTTAAAATGAGTGC 58.258 36.000 15.85 9.58 0.00 4.40
4132 5262 0.462047 AATTGCTCCGCTAAGACCCG 60.462 55.000 0.00 0.00 0.00 5.28
4191 5321 4.266945 GCTTATCGAATTTCAACTCTGCG 58.733 43.478 0.00 0.00 0.00 5.18
4316 5446 0.096454 GAAATCTTACACCACGCGGC 59.904 55.000 12.47 0.00 34.57 6.53
4375 5505 4.859304 AACTCACGGACTACATACACAA 57.141 40.909 0.00 0.00 0.00 3.33
4523 5653 9.022884 TGAAAACATACATGAATCAGGAATGAA 57.977 29.630 0.58 0.00 0.00 2.57
4558 5689 2.280457 GCCTCATAGACTGGCGGC 60.280 66.667 0.00 0.00 37.11 6.53
4595 5730 9.655769 GATGTGTGTATTATTGATTCACATGTC 57.344 33.333 11.60 3.46 44.46 3.06
4651 6018 5.373222 TGCTGCTAGACTGGAAAGTAAAAA 58.627 37.500 0.00 0.00 0.00 1.94
4869 6236 4.341487 GACTTATAAACCAAACAGGGCCT 58.659 43.478 0.00 0.00 43.89 5.19
4870 6237 3.446161 GGACTTATAAACCAAACAGGGCC 59.554 47.826 0.00 0.00 43.89 5.80
4871 6238 4.341487 AGGACTTATAAACCAAACAGGGC 58.659 43.478 9.91 0.00 43.89 5.19
4872 6239 7.282450 GTCATAGGACTTATAAACCAAACAGGG 59.718 40.741 0.00 0.00 40.59 4.45
4873 6240 8.209917 GTCATAGGACTTATAAACCAAACAGG 57.790 38.462 0.00 0.00 40.99 4.00
4904 6271 4.964593 AGCGACTTTTTAGTTGGGACTAA 58.035 39.130 0.00 0.00 44.49 2.24
4905 6272 4.612264 AGCGACTTTTTAGTTGGGACTA 57.388 40.909 0.00 0.00 37.33 2.59
4906 6273 3.487120 AGCGACTTTTTAGTTGGGACT 57.513 42.857 0.00 0.00 39.97 3.85
4907 6274 4.313282 ACTAGCGACTTTTTAGTTGGGAC 58.687 43.478 0.00 0.00 0.00 4.46
4908 6275 4.562143 GGACTAGCGACTTTTTAGTTGGGA 60.562 45.833 0.00 0.00 0.00 4.37
4909 6276 3.683340 GGACTAGCGACTTTTTAGTTGGG 59.317 47.826 0.00 0.00 0.00 4.12
4910 6277 3.683340 GGGACTAGCGACTTTTTAGTTGG 59.317 47.826 0.00 0.00 0.00 3.77
4911 6278 4.566987 AGGGACTAGCGACTTTTTAGTTG 58.433 43.478 0.00 0.00 36.02 3.16
4912 6279 4.886496 AGGGACTAGCGACTTTTTAGTT 57.114 40.909 0.00 0.00 36.02 2.24
4913 6280 5.990120 TTAGGGACTAGCGACTTTTTAGT 57.010 39.130 0.00 0.00 44.25 2.24
4914 6281 7.387122 ACTTTTTAGGGACTAGCGACTTTTTAG 59.613 37.037 0.00 0.00 44.25 1.85
4915 6282 7.219322 ACTTTTTAGGGACTAGCGACTTTTTA 58.781 34.615 0.00 0.00 44.25 1.52
4916 6283 6.060136 ACTTTTTAGGGACTAGCGACTTTTT 58.940 36.000 0.00 0.00 44.25 1.94
4917 6284 5.618236 ACTTTTTAGGGACTAGCGACTTTT 58.382 37.500 0.00 0.00 44.25 2.27
4918 6285 5.224821 ACTTTTTAGGGACTAGCGACTTT 57.775 39.130 0.00 0.00 44.25 2.66
4919 6286 4.322574 GGACTTTTTAGGGACTAGCGACTT 60.323 45.833 0.00 0.00 44.25 3.01
4920 6287 3.195182 GGACTTTTTAGGGACTAGCGACT 59.805 47.826 0.00 0.00 44.25 4.18
4921 6288 3.195182 AGGACTTTTTAGGGACTAGCGAC 59.805 47.826 0.00 0.00 44.25 5.19
4922 6289 3.438183 AGGACTTTTTAGGGACTAGCGA 58.562 45.455 0.00 0.00 44.25 4.93
4923 6290 3.889520 AGGACTTTTTAGGGACTAGCG 57.110 47.619 0.00 0.00 44.25 4.26
4924 6291 6.046290 TGTAAGGACTTTTTAGGGACTAGC 57.954 41.667 0.00 0.00 44.25 3.42
4925 6292 7.621796 ACATGTAAGGACTTTTTAGGGACTAG 58.378 38.462 0.00 0.00 44.25 2.57
4926 6293 7.563724 ACATGTAAGGACTTTTTAGGGACTA 57.436 36.000 0.00 0.00 41.75 2.59
4927 6294 6.449830 ACATGTAAGGACTTTTTAGGGACT 57.550 37.500 0.00 0.00 46.37 3.85
4928 6295 7.368059 CAAACATGTAAGGACTTTTTAGGGAC 58.632 38.462 0.00 0.00 0.00 4.46
4929 6296 6.492087 CCAAACATGTAAGGACTTTTTAGGGA 59.508 38.462 10.23 0.00 0.00 4.20
4930 6297 6.266786 ACCAAACATGTAAGGACTTTTTAGGG 59.733 38.462 20.01 1.61 0.00 3.53
4931 6298 7.284919 ACCAAACATGTAAGGACTTTTTAGG 57.715 36.000 20.01 6.00 0.00 2.69
4932 6299 7.865889 GGAACCAAACATGTAAGGACTTTTTAG 59.134 37.037 20.01 0.00 0.00 1.85
4933 6300 7.562088 AGGAACCAAACATGTAAGGACTTTTTA 59.438 33.333 20.01 0.00 0.00 1.52
4934 6301 6.382859 AGGAACCAAACATGTAAGGACTTTTT 59.617 34.615 20.01 6.32 0.00 1.94
4935 6302 5.897250 AGGAACCAAACATGTAAGGACTTTT 59.103 36.000 20.01 6.63 0.00 2.27
4936 6303 5.301805 CAGGAACCAAACATGTAAGGACTTT 59.698 40.000 20.01 6.93 0.00 2.66
4937 6304 4.827284 CAGGAACCAAACATGTAAGGACTT 59.173 41.667 20.01 7.53 0.00 3.01
4938 6305 4.398319 CAGGAACCAAACATGTAAGGACT 58.602 43.478 20.01 12.72 0.00 3.85
4939 6306 3.506067 CCAGGAACCAAACATGTAAGGAC 59.494 47.826 20.01 13.52 0.00 3.85
4940 6307 3.499563 CCCAGGAACCAAACATGTAAGGA 60.500 47.826 20.01 0.00 0.00 3.36
4941 6308 2.825532 CCCAGGAACCAAACATGTAAGG 59.174 50.000 13.40 13.40 0.00 2.69
4942 6309 3.506067 GTCCCAGGAACCAAACATGTAAG 59.494 47.826 0.00 0.00 0.00 2.34
4943 6310 3.139397 AGTCCCAGGAACCAAACATGTAA 59.861 43.478 0.00 0.00 0.00 2.41
4944 6311 2.714250 AGTCCCAGGAACCAAACATGTA 59.286 45.455 0.00 0.00 0.00 2.29
4945 6312 1.499007 AGTCCCAGGAACCAAACATGT 59.501 47.619 0.00 0.00 0.00 3.21
4946 6313 2.292828 AGTCCCAGGAACCAAACATG 57.707 50.000 0.00 0.00 0.00 3.21
4947 6314 4.149598 GTTTAGTCCCAGGAACCAAACAT 58.850 43.478 0.00 0.00 0.00 2.71
4948 6315 3.053544 TGTTTAGTCCCAGGAACCAAACA 60.054 43.478 0.00 0.00 33.24 2.83
4949 6316 3.558033 TGTTTAGTCCCAGGAACCAAAC 58.442 45.455 0.00 0.00 0.00 2.93
4950 6317 3.955524 TGTTTAGTCCCAGGAACCAAA 57.044 42.857 0.00 0.00 0.00 3.28
4951 6318 3.396276 TCATGTTTAGTCCCAGGAACCAA 59.604 43.478 0.00 0.00 0.00 3.67
4952 6319 2.983192 TCATGTTTAGTCCCAGGAACCA 59.017 45.455 0.00 0.00 0.00 3.67
4953 6320 3.713826 TCATGTTTAGTCCCAGGAACC 57.286 47.619 0.00 0.00 0.00 3.62
4954 6321 4.652822 AGTTCATGTTTAGTCCCAGGAAC 58.347 43.478 8.60 8.60 46.89 3.62
4955 6322 4.993705 AGTTCATGTTTAGTCCCAGGAA 57.006 40.909 0.00 0.00 0.00 3.36
4956 6323 6.442541 TTTAGTTCATGTTTAGTCCCAGGA 57.557 37.500 0.00 0.00 0.00 3.86
4957 6324 6.940298 TCTTTTAGTTCATGTTTAGTCCCAGG 59.060 38.462 0.00 0.00 0.00 4.45
4958 6325 7.094762 GGTCTTTTAGTTCATGTTTAGTCCCAG 60.095 40.741 0.00 0.00 0.00 4.45
4959 6326 6.713450 GGTCTTTTAGTTCATGTTTAGTCCCA 59.287 38.462 0.00 0.00 0.00 4.37
4960 6327 6.150641 GGGTCTTTTAGTTCATGTTTAGTCCC 59.849 42.308 0.00 0.00 0.00 4.46
4961 6328 6.150641 GGGGTCTTTTAGTTCATGTTTAGTCC 59.849 42.308 0.00 0.00 0.00 3.85
4962 6329 6.713450 TGGGGTCTTTTAGTTCATGTTTAGTC 59.287 38.462 0.00 0.00 0.00 2.59
4963 6330 6.607019 TGGGGTCTTTTAGTTCATGTTTAGT 58.393 36.000 0.00 0.00 0.00 2.24
4964 6331 7.519032 TTGGGGTCTTTTAGTTCATGTTTAG 57.481 36.000 0.00 0.00 0.00 1.85
4965 6332 7.899648 TTTGGGGTCTTTTAGTTCATGTTTA 57.100 32.000 0.00 0.00 0.00 2.01
4966 6333 6.800072 TTTGGGGTCTTTTAGTTCATGTTT 57.200 33.333 0.00 0.00 0.00 2.83
4967 6334 6.800072 TTTTGGGGTCTTTTAGTTCATGTT 57.200 33.333 0.00 0.00 0.00 2.71
4968 6335 6.800072 TTTTTGGGGTCTTTTAGTTCATGT 57.200 33.333 0.00 0.00 0.00 3.21
4998 6365 6.657875 AGATTTATGAAAGAAGACCCTGAGG 58.342 40.000 0.00 0.00 40.04 3.86
4999 6366 7.334090 TGAGATTTATGAAAGAAGACCCTGAG 58.666 38.462 0.00 0.00 0.00 3.35
5000 6367 7.257790 TGAGATTTATGAAAGAAGACCCTGA 57.742 36.000 0.00 0.00 0.00 3.86
5001 6368 7.928307 TTGAGATTTATGAAAGAAGACCCTG 57.072 36.000 0.00 0.00 0.00 4.45
5002 6369 8.964772 CATTTGAGATTTATGAAAGAAGACCCT 58.035 33.333 0.00 0.00 0.00 4.34
5003 6370 8.960591 TCATTTGAGATTTATGAAAGAAGACCC 58.039 33.333 0.00 0.00 0.00 4.46
5004 6371 9.780413 GTCATTTGAGATTTATGAAAGAAGACC 57.220 33.333 0.00 0.00 30.72 3.85
5005 6372 9.780413 GGTCATTTGAGATTTATGAAAGAAGAC 57.220 33.333 0.00 0.00 30.72 3.01
5006 6373 9.519191 TGGTCATTTGAGATTTATGAAAGAAGA 57.481 29.630 0.00 0.00 30.72 2.87
5007 6374 9.565213 GTGGTCATTTGAGATTTATGAAAGAAG 57.435 33.333 0.00 0.00 30.72 2.85
5008 6375 9.300681 AGTGGTCATTTGAGATTTATGAAAGAA 57.699 29.630 0.00 0.00 30.72 2.52
5009 6376 8.868522 AGTGGTCATTTGAGATTTATGAAAGA 57.131 30.769 0.00 0.00 30.72 2.52
5010 6377 9.918630 AAAGTGGTCATTTGAGATTTATGAAAG 57.081 29.630 0.00 0.00 30.72 2.62
5016 6383 9.010029 GGACTTAAAGTGGTCATTTGAGATTTA 57.990 33.333 0.00 0.00 34.49 1.40
5017 6384 7.039714 GGGACTTAAAGTGGTCATTTGAGATTT 60.040 37.037 0.00 0.00 34.49 2.17
5018 6385 6.434340 GGGACTTAAAGTGGTCATTTGAGATT 59.566 38.462 0.00 0.00 34.49 2.40
5019 6386 5.946377 GGGACTTAAAGTGGTCATTTGAGAT 59.054 40.000 0.00 0.00 34.49 2.75
5020 6387 5.073144 AGGGACTTAAAGTGGTCATTTGAGA 59.927 40.000 0.00 0.00 27.25 3.27
5021 6388 5.316987 AGGGACTTAAAGTGGTCATTTGAG 58.683 41.667 0.00 0.00 27.25 3.02
5022 6389 5.313712 GAGGGACTTAAAGTGGTCATTTGA 58.686 41.667 0.00 0.00 41.55 2.69
5023 6390 4.459337 GGAGGGACTTAAAGTGGTCATTTG 59.541 45.833 0.00 0.00 41.55 2.32
5024 6391 4.354087 AGGAGGGACTTAAAGTGGTCATTT 59.646 41.667 0.00 0.00 41.55 2.32
5025 6392 3.916989 AGGAGGGACTTAAAGTGGTCATT 59.083 43.478 0.00 0.00 41.55 2.57
5026 6393 3.264450 CAGGAGGGACTTAAAGTGGTCAT 59.736 47.826 0.00 0.00 41.55 3.06
5027 6394 2.637872 CAGGAGGGACTTAAAGTGGTCA 59.362 50.000 0.00 0.00 41.55 4.02
5028 6395 2.638363 ACAGGAGGGACTTAAAGTGGTC 59.362 50.000 0.00 0.00 41.55 4.02
5029 6396 2.702748 ACAGGAGGGACTTAAAGTGGT 58.297 47.619 0.00 0.00 41.55 4.16
5030 6397 3.790089 AACAGGAGGGACTTAAAGTGG 57.210 47.619 0.00 0.00 41.55 4.00
5031 6398 5.866207 ACTAAACAGGAGGGACTTAAAGTG 58.134 41.667 0.00 0.00 41.55 3.16
5032 6399 6.511017 AACTAAACAGGAGGGACTTAAAGT 57.489 37.500 0.00 0.00 41.55 2.66
5033 6400 8.373220 TCTAAACTAAACAGGAGGGACTTAAAG 58.627 37.037 0.00 0.00 41.55 1.85
5034 6401 8.266363 TCTAAACTAAACAGGAGGGACTTAAA 57.734 34.615 0.00 0.00 41.55 1.52
5035 6402 7.860649 TCTAAACTAAACAGGAGGGACTTAA 57.139 36.000 0.00 0.00 41.55 1.85
5036 6403 7.093024 CCATCTAAACTAAACAGGAGGGACTTA 60.093 40.741 0.00 0.00 41.55 2.24
5037 6404 6.296489 CCATCTAAACTAAACAGGAGGGACTT 60.296 42.308 0.00 0.00 41.55 3.01
5039 6406 5.429130 CCATCTAAACTAAACAGGAGGGAC 58.571 45.833 0.00 0.00 0.00 4.46
5040 6407 4.473559 CCCATCTAAACTAAACAGGAGGGA 59.526 45.833 0.00 0.00 33.23 4.20
5041 6408 4.473559 TCCCATCTAAACTAAACAGGAGGG 59.526 45.833 0.00 0.00 0.00 4.30
5042 6409 5.189934 AGTCCCATCTAAACTAAACAGGAGG 59.810 44.000 0.00 0.00 0.00 4.30
5043 6410 6.301169 AGTCCCATCTAAACTAAACAGGAG 57.699 41.667 0.00 0.00 0.00 3.69
5044 6411 7.801893 TTAGTCCCATCTAAACTAAACAGGA 57.198 36.000 0.00 0.00 33.70 3.86
5045 6412 8.857694 TTTTAGTCCCATCTAAACTAAACAGG 57.142 34.615 6.46 0.00 42.24 4.00
5046 6413 8.947115 CCTTTTAGTCCCATCTAAACTAAACAG 58.053 37.037 6.46 7.47 42.24 3.16
5047 6414 7.886446 CCCTTTTAGTCCCATCTAAACTAAACA 59.114 37.037 6.46 0.35 42.24 2.83
5048 6415 8.105197 TCCCTTTTAGTCCCATCTAAACTAAAC 58.895 37.037 6.46 0.00 42.24 2.01
5049 6416 8.105197 GTCCCTTTTAGTCCCATCTAAACTAAA 58.895 37.037 3.50 3.50 41.36 1.85
5050 6417 7.460082 AGTCCCTTTTAGTCCCATCTAAACTAA 59.540 37.037 0.00 0.00 38.89 2.24
5051 6418 6.964086 AGTCCCTTTTAGTCCCATCTAAACTA 59.036 38.462 0.00 0.00 38.89 2.24
5052 6419 5.791141 AGTCCCTTTTAGTCCCATCTAAACT 59.209 40.000 0.00 0.00 38.89 2.66
5053 6420 6.063496 AGTCCCTTTTAGTCCCATCTAAAC 57.937 41.667 0.00 0.00 38.89 2.01
5054 6421 6.713731 AAGTCCCTTTTAGTCCCATCTAAA 57.286 37.500 0.00 0.00 37.88 1.85
5055 6422 6.713731 AAAGTCCCTTTTAGTCCCATCTAA 57.286 37.500 0.00 0.00 28.27 2.10
5056 6423 6.713731 AAAAGTCCCTTTTAGTCCCATCTA 57.286 37.500 0.30 0.00 41.17 1.98
5057 6424 5.600669 AAAAGTCCCTTTTAGTCCCATCT 57.399 39.130 0.30 0.00 41.17 2.90
5077 6444 7.321908 GGTGTTTGTTTACAGGGACTTAAAAA 58.678 34.615 0.00 0.00 34.60 1.94
5078 6445 6.127394 GGGTGTTTGTTTACAGGGACTTAAAA 60.127 38.462 0.00 0.00 34.60 1.52
5079 6446 5.360429 GGGTGTTTGTTTACAGGGACTTAAA 59.640 40.000 0.00 0.00 34.60 1.52
5080 6447 4.888823 GGGTGTTTGTTTACAGGGACTTAA 59.111 41.667 0.00 0.00 34.60 1.85
5081 6448 4.463070 GGGTGTTTGTTTACAGGGACTTA 58.537 43.478 0.00 0.00 34.60 2.24
5082 6449 3.293337 GGGTGTTTGTTTACAGGGACTT 58.707 45.455 0.00 0.00 34.60 3.01
5083 6450 2.423803 GGGGTGTTTGTTTACAGGGACT 60.424 50.000 0.00 0.00 43.88 3.85
5084 6451 1.958579 GGGGTGTTTGTTTACAGGGAC 59.041 52.381 0.00 0.00 0.00 4.46
5085 6452 1.133419 GGGGGTGTTTGTTTACAGGGA 60.133 52.381 0.00 0.00 0.00 4.20
5086 6453 1.133294 AGGGGGTGTTTGTTTACAGGG 60.133 52.381 0.00 0.00 0.00 4.45
5087 6454 2.375014 AGGGGGTGTTTGTTTACAGG 57.625 50.000 0.00 0.00 0.00 4.00
5088 6455 4.466827 AGTTAGGGGGTGTTTGTTTACAG 58.533 43.478 0.00 0.00 0.00 2.74
5089 6456 4.523168 AGTTAGGGGGTGTTTGTTTACA 57.477 40.909 0.00 0.00 0.00 2.41
5090 6457 4.646040 ACAAGTTAGGGGGTGTTTGTTTAC 59.354 41.667 0.00 0.00 0.00 2.01
5091 6458 4.645588 CACAAGTTAGGGGGTGTTTGTTTA 59.354 41.667 0.00 0.00 0.00 2.01
5092 6459 3.449377 CACAAGTTAGGGGGTGTTTGTTT 59.551 43.478 0.00 0.00 0.00 2.83
5093 6460 3.028130 CACAAGTTAGGGGGTGTTTGTT 58.972 45.455 0.00 0.00 0.00 2.83
5094 6461 2.242708 TCACAAGTTAGGGGGTGTTTGT 59.757 45.455 0.00 0.00 33.17 2.83
5095 6462 2.938838 TCACAAGTTAGGGGGTGTTTG 58.061 47.619 0.00 0.00 33.17 2.93
5096 6463 3.895704 ATCACAAGTTAGGGGGTGTTT 57.104 42.857 0.00 0.00 33.17 2.83
5097 6464 3.895041 CAAATCACAAGTTAGGGGGTGTT 59.105 43.478 0.00 0.00 33.17 3.32
5098 6465 3.117284 ACAAATCACAAGTTAGGGGGTGT 60.117 43.478 0.00 0.00 33.17 4.16
5099 6466 3.496331 ACAAATCACAAGTTAGGGGGTG 58.504 45.455 0.00 0.00 0.00 4.61
5100 6467 3.895704 ACAAATCACAAGTTAGGGGGT 57.104 42.857 0.00 0.00 0.00 4.95
5101 6468 4.586841 TCAAACAAATCACAAGTTAGGGGG 59.413 41.667 0.00 0.00 0.00 5.40
5102 6469 5.068460 TGTCAAACAAATCACAAGTTAGGGG 59.932 40.000 0.00 0.00 0.00 4.79
5103 6470 6.142818 TGTCAAACAAATCACAAGTTAGGG 57.857 37.500 0.00 0.00 0.00 3.53
5104 6471 7.920151 TCAATGTCAAACAAATCACAAGTTAGG 59.080 33.333 0.00 0.00 0.00 2.69
5105 6472 8.854979 TCAATGTCAAACAAATCACAAGTTAG 57.145 30.769 0.00 0.00 0.00 2.34
5107 6474 9.814899 TTATCAATGTCAAACAAATCACAAGTT 57.185 25.926 0.00 0.00 0.00 2.66
5111 6478 9.205719 CCAATTATCAATGTCAAACAAATCACA 57.794 29.630 0.00 0.00 0.00 3.58
5230 6597 8.986477 ATTTGTTAATTTCCTGTGATTGTAGC 57.014 30.769 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.