Multiple sequence alignment - TraesCS4B01G168900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G168900 chr4B 100.000 8674 0 0 575 9248 369286582 369277909 0.000000e+00 16018.0
1 TraesCS4B01G168900 chr4B 100.000 204 0 0 1 204 369287156 369286953 2.440000e-100 377.0
2 TraesCS4B01G168900 chr4D 93.209 6126 197 74 577 6580 297936381 297930353 0.000000e+00 8805.0
3 TraesCS4B01G168900 chr4D 95.308 1300 59 2 6734 8032 297930357 297929059 0.000000e+00 2061.0
4 TraesCS4B01G168900 chr4D 89.808 834 46 17 8028 8840 297928978 297928163 0.000000e+00 1033.0
5 TraesCS4B01G168900 chr4D 80.563 391 47 16 8862 9245 297928047 297927679 3.290000e-69 274.0
6 TraesCS4B01G168900 chr4D 91.133 203 4 5 6 204 297936623 297936431 7.120000e-66 263.0
7 TraesCS4B01G168900 chr4A 96.007 3256 85 14 3347 6580 189602379 189605611 0.000000e+00 5251.0
8 TraesCS4B01G168900 chr4A 94.481 2265 80 27 6734 8990 189605607 189607834 0.000000e+00 3448.0
9 TraesCS4B01G168900 chr4A 92.679 2049 79 26 1245 3260 189600169 189602179 0.000000e+00 2887.0
10 TraesCS4B01G168900 chr4A 88.995 209 4 4 5 204 189598952 189599150 3.340000e-59 241.0
11 TraesCS4B01G168900 chr4A 92.105 114 7 2 3256 3368 189602258 189602370 9.610000e-35 159.0
12 TraesCS4B01G168900 chr4A 87.770 139 4 6 575 712 189599203 189599329 5.780000e-32 150.0
13 TraesCS4B01G168900 chr7B 93.793 145 7 1 6579 6723 54502142 54502284 5.620000e-52 217.0
14 TraesCS4B01G168900 chr3D 92.157 153 6 1 6576 6722 23953071 23953223 2.620000e-50 211.0
15 TraesCS4B01G168900 chr3D 90.667 150 12 1 6579 6728 345096653 345096506 2.040000e-46 198.0
16 TraesCS4B01G168900 chr5D 91.034 145 13 0 6579 6723 563600895 563601039 7.330000e-46 196.0
17 TraesCS4B01G168900 chr2D 88.485 165 14 3 6572 6732 310541310 310541147 2.630000e-45 195.0
18 TraesCS4B01G168900 chr3A 89.933 149 12 2 6578 6724 719628413 719628266 1.230000e-43 189.0
19 TraesCS4B01G168900 chr7A 89.333 150 14 2 6579 6728 533683448 533683301 4.410000e-43 187.0
20 TraesCS4B01G168900 chr1B 88.961 154 12 2 6572 6725 386042614 386042466 1.590000e-42 185.0
21 TraesCS4B01G168900 chr1B 88.889 45 3 2 8757 8799 348899339 348899383 5.000000e-03 54.7
22 TraesCS4B01G168900 chr3B 87.421 159 16 2 6578 6733 741863329 741863486 7.380000e-41 180.0
23 TraesCS4B01G168900 chr5A 88.542 96 11 0 6216 6311 708620028 708620123 5.870000e-22 117.0
24 TraesCS4B01G168900 chr6D 86.735 98 11 2 6216 6312 82698385 82698289 3.530000e-19 108.0
25 TraesCS4B01G168900 chr6A 78.571 126 24 2 6187 6312 99506082 99505960 7.700000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G168900 chr4B 369277909 369287156 9247 True 8197.500000 16018 100.000000 1 9248 2 chr4B.!!$R1 9247
1 TraesCS4B01G168900 chr4D 297927679 297936623 8944 True 2487.200000 8805 90.004200 6 9245 5 chr4D.!!$R1 9239
2 TraesCS4B01G168900 chr4A 189598952 189607834 8882 False 2022.666667 5251 92.006167 5 8990 6 chr4A.!!$F1 8985

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 757 0.032017 AGATAGGGACGGCAACCTCT 60.032 55.000 0.00 0.00 38.30 3.69 F
781 799 0.171455 TTTTGTTCACACACACCCGC 59.829 50.000 0.00 0.00 30.32 6.13 F
914 948 0.179032 CAAAAACCCAAACCCCCAGC 60.179 55.000 0.00 0.00 0.00 4.85 F
1704 2045 0.253894 TAACCCTAGAAAAGGCGCCC 59.746 55.000 26.15 7.74 45.03 6.13 F
2950 3305 0.037590 AAGGCCGATGGTAGCAAACA 59.962 50.000 0.00 0.00 0.00 2.83 F
3376 3850 1.202417 ACACGCATCCTCTTGATACCG 60.202 52.381 0.00 0.00 35.02 4.02 F
5218 5713 2.809446 TCCGTAAACAGCATGATCTCG 58.191 47.619 0.00 0.00 39.69 4.04 F
5796 6294 0.107831 TGGTGCCACTGAACAGTACC 59.892 55.000 14.73 14.73 40.20 3.34 F
7095 7594 0.401395 AGACAGTGGGACCAAGGGAA 60.401 55.000 0.00 0.00 0.00 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2029 2373 0.833287 AGCTGTCGGTGAATGGCTAT 59.167 50.000 0.00 0.00 0.00 2.97 R
2676 3031 3.074412 GACCAATCAACCAGTACAGGTG 58.926 50.000 11.15 2.46 42.25 4.00 R
2865 3220 2.047769 TGGTGGTAGGTGTGGGTATT 57.952 50.000 0.00 0.00 0.00 1.89 R
3369 3843 0.033503 TGAGAGGAGTGGCGGTATCA 60.034 55.000 0.00 0.00 0.00 2.15 R
4880 5375 3.181514 CGCCAGGTACATTTAAACCTTCG 60.182 47.826 0.00 0.00 43.77 3.79 R
5283 5780 2.032681 AGTCCCTCGCCAGCAAAC 59.967 61.111 0.00 0.00 0.00 2.93 R
7214 7719 0.391228 TACGAGTGTGCCTTGCTTCA 59.609 50.000 0.00 0.00 0.00 3.02 R
7723 8228 0.531200 GACGGAGGGGTGACAAGTAG 59.469 60.000 0.00 0.00 0.00 2.57 R
8736 9348 0.179169 GTCTCGGTCGACTTAGTGCC 60.179 60.000 16.46 0.00 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 112 1.367102 GTGTTTCGGGGGACGTGTA 59.633 57.895 0.00 0.00 44.69 2.90
103 113 0.249826 GTGTTTCGGGGGACGTGTAA 60.250 55.000 0.00 0.00 44.69 2.41
144 154 2.735677 CCGCACGCATAAGCAACGA 61.736 57.895 0.00 0.00 42.27 3.85
162 172 2.135139 CGAAGATGCGCTTTATGGCTA 58.865 47.619 9.73 0.00 36.83 3.93
163 173 2.543848 CGAAGATGCGCTTTATGGCTAA 59.456 45.455 9.73 0.00 36.83 3.09
164 174 3.187227 CGAAGATGCGCTTTATGGCTAAT 59.813 43.478 9.73 0.00 36.83 1.73
165 175 4.667668 CGAAGATGCGCTTTATGGCTAATC 60.668 45.833 9.73 0.00 36.83 1.75
166 176 3.077359 AGATGCGCTTTATGGCTAATCC 58.923 45.455 9.73 0.00 0.00 3.01
167 177 4.987926 AAGATGCGCTTTATGGCTAATCCA 60.988 41.667 9.73 0.00 41.09 3.41
168 178 8.009389 GAAGATGCGCTTTATGGCTAATCCAT 62.009 42.308 9.73 1.78 46.69 3.41
169 179 9.679721 GAAGATGCGCTTTATGGCTAATCCATC 62.680 44.444 9.73 0.00 43.97 3.51
598 608 0.977395 GAACTGTGGGCTCACTAGGT 59.023 55.000 19.48 12.31 43.94 3.08
611 621 2.938243 TAGGTGGTGGCATGGGCA 60.938 61.111 0.00 0.00 43.71 5.36
612 622 2.288642 CTAGGTGGTGGCATGGGCAT 62.289 60.000 0.00 0.00 43.71 4.40
613 623 2.570774 TAGGTGGTGGCATGGGCATG 62.571 60.000 0.00 0.00 43.71 4.06
614 624 3.463585 GTGGTGGCATGGGCATGG 61.464 66.667 0.00 0.00 43.71 3.66
615 625 4.781616 TGGTGGCATGGGCATGGG 62.782 66.667 0.00 0.00 43.71 4.00
688 703 2.935955 GCACACGGCACACACTAC 59.064 61.111 0.00 0.00 43.97 2.73
689 704 1.594293 GCACACGGCACACACTACT 60.594 57.895 0.00 0.00 43.97 2.57
690 705 1.557443 GCACACGGCACACACTACTC 61.557 60.000 0.00 0.00 43.97 2.59
691 706 0.944311 CACACGGCACACACTACTCC 60.944 60.000 0.00 0.00 0.00 3.85
692 707 1.374252 CACGGCACACACTACTCCC 60.374 63.158 0.00 0.00 0.00 4.30
693 708 2.126071 CGGCACACACTACTCCCG 60.126 66.667 0.00 0.00 0.00 5.14
694 709 2.434359 GGCACACACTACTCCCGC 60.434 66.667 0.00 0.00 0.00 6.13
695 710 2.657237 GCACACACTACTCCCGCT 59.343 61.111 0.00 0.00 0.00 5.52
696 711 1.601419 GGCACACACTACTCCCGCTA 61.601 60.000 0.00 0.00 0.00 4.26
718 733 1.880027 CTTCCCCTATAAATGCGGCAC 59.120 52.381 4.03 0.00 0.00 5.01
733 748 2.731571 GCACCAGATAGGGACGGCA 61.732 63.158 0.00 0.00 43.89 5.69
734 749 1.904771 CACCAGATAGGGACGGCAA 59.095 57.895 0.00 0.00 43.89 4.52
739 757 0.032017 AGATAGGGACGGCAACCTCT 60.032 55.000 0.00 0.00 38.30 3.69
748 766 1.604915 GGCAACCTCTTCCTCCTCC 59.395 63.158 0.00 0.00 0.00 4.30
750 768 0.912006 GCAACCTCTTCCTCCTCCCT 60.912 60.000 0.00 0.00 0.00 4.20
751 769 0.908198 CAACCTCTTCCTCCTCCCTG 59.092 60.000 0.00 0.00 0.00 4.45
774 792 1.740585 CTCGTGGGTTTTGTTCACACA 59.259 47.619 0.00 0.00 38.93 3.72
777 795 2.601804 GTGGGTTTTGTTCACACACAC 58.398 47.619 0.51 0.00 46.24 3.82
779 797 1.134936 GGGTTTTGTTCACACACACCC 60.135 52.381 6.29 6.29 44.44 4.61
781 799 0.171455 TTTTGTTCACACACACCCGC 59.829 50.000 0.00 0.00 30.32 6.13
782 800 0.960861 TTTGTTCACACACACCCGCA 60.961 50.000 0.00 0.00 30.32 5.69
804 836 0.673956 GAGAGGGTTGCTCGGAAACC 60.674 60.000 5.46 5.46 45.36 3.27
814 846 2.667199 CGGAAACCCGCGGACTTT 60.667 61.111 30.73 22.84 40.66 2.66
818 850 3.785122 AAACCCGCGGACTTTGGCT 62.785 57.895 30.73 0.00 0.00 4.75
837 871 3.956314 GCGTACCCACCCAACCCA 61.956 66.667 0.00 0.00 0.00 4.51
838 872 2.349755 CGTACCCACCCAACCCAG 59.650 66.667 0.00 0.00 0.00 4.45
839 873 2.035155 GTACCCACCCAACCCAGC 59.965 66.667 0.00 0.00 0.00 4.85
844 878 4.994756 CACCCAACCCAGCCCCAC 62.995 72.222 0.00 0.00 0.00 4.61
868 902 2.371259 GCCTCACTTCCCCTCCTCC 61.371 68.421 0.00 0.00 0.00 4.30
869 903 1.394151 CCTCACTTCCCCTCCTCCT 59.606 63.158 0.00 0.00 0.00 3.69
870 904 0.689412 CCTCACTTCCCCTCCTCCTC 60.689 65.000 0.00 0.00 0.00 3.71
911 945 1.149627 GCCAAAAACCCAAACCCCC 59.850 57.895 0.00 0.00 0.00 5.40
912 946 1.636769 GCCAAAAACCCAAACCCCCA 61.637 55.000 0.00 0.00 0.00 4.96
913 947 0.472044 CCAAAAACCCAAACCCCCAG 59.528 55.000 0.00 0.00 0.00 4.45
914 948 0.179032 CAAAAACCCAAACCCCCAGC 60.179 55.000 0.00 0.00 0.00 4.85
915 949 1.349542 AAAAACCCAAACCCCCAGCC 61.350 55.000 0.00 0.00 0.00 4.85
927 961 0.466922 CCCCAGCCCAGAATAAGCAG 60.467 60.000 0.00 0.00 0.00 4.24
1224 1264 4.803426 GAGGTGCGTGCTCCTCCG 62.803 72.222 25.29 0.00 45.74 4.63
1226 1266 4.681978 GGTGCGTGCTCCTCCGTT 62.682 66.667 5.72 0.00 0.00 4.44
1229 1269 3.479269 GCGTGCTCCTCCGTTTCG 61.479 66.667 0.00 0.00 0.00 3.46
1230 1270 3.479269 CGTGCTCCTCCGTTTCGC 61.479 66.667 0.00 0.00 0.00 4.70
1231 1271 3.119096 GTGCTCCTCCGTTTCGCC 61.119 66.667 0.00 0.00 0.00 5.54
1232 1272 4.735132 TGCTCCTCCGTTTCGCCG 62.735 66.667 0.00 0.00 0.00 6.46
1385 1708 3.640967 TCTCTCCTCCGGACTAGTACTAC 59.359 52.174 0.00 0.00 0.00 2.73
1387 1710 4.036518 TCTCCTCCGGACTAGTACTACTT 58.963 47.826 0.00 0.00 0.00 2.24
1388 1711 4.128643 CTCCTCCGGACTAGTACTACTTG 58.871 52.174 0.00 0.00 0.00 3.16
1389 1712 2.617774 CCTCCGGACTAGTACTACTTGC 59.382 54.545 0.00 0.00 0.00 4.01
1390 1713 3.543665 CTCCGGACTAGTACTACTTGCT 58.456 50.000 0.00 0.00 0.00 3.91
1391 1714 4.444022 CCTCCGGACTAGTACTACTTGCTA 60.444 50.000 0.00 0.00 0.00 3.49
1426 1749 4.158015 ACATCGGGTTAGGGTAGGATTAG 58.842 47.826 0.00 0.00 0.00 1.73
1429 1752 4.729868 TCGGGTTAGGGTAGGATTAGTAC 58.270 47.826 0.00 0.00 0.00 2.73
1455 1778 4.751060 TCCTTGATTAATTGCGTCGTACT 58.249 39.130 0.00 0.00 0.00 2.73
1506 1847 2.131183 GATTCCGTGACTATCTGCTGC 58.869 52.381 0.00 0.00 0.00 5.25
1512 1853 0.833287 TGACTATCTGCTGCCTTCCC 59.167 55.000 0.00 0.00 0.00 3.97
1539 1880 9.088512 CAAGGATTTCTGTTATGTACTGTAGAC 57.911 37.037 0.00 0.00 0.00 2.59
1584 1925 0.834687 TGTTAGACCAAGTCGGCCCT 60.835 55.000 0.00 0.00 39.03 5.19
1585 1926 0.323957 GTTAGACCAAGTCGGCCCTT 59.676 55.000 0.00 0.00 39.03 3.95
1586 1927 1.061546 TTAGACCAAGTCGGCCCTTT 58.938 50.000 0.00 0.00 39.03 3.11
1587 1928 0.611714 TAGACCAAGTCGGCCCTTTC 59.388 55.000 0.00 0.00 39.03 2.62
1591 1932 0.881796 CCAAGTCGGCCCTTTCTTTC 59.118 55.000 0.00 0.00 0.00 2.62
1701 2042 4.482386 GCTTTTTAACCCTAGAAAAGGCG 58.518 43.478 12.81 0.00 45.03 5.52
1704 2045 0.253894 TAACCCTAGAAAAGGCGCCC 59.746 55.000 26.15 7.74 45.03 6.13
1738 2082 6.149474 ACGAAATCCAACTTTTACCATCTCAG 59.851 38.462 0.00 0.00 0.00 3.35
1794 2138 6.221858 GCATTTTGCCAAAAAGATTAACGA 57.778 33.333 6.70 0.00 38.62 3.85
1795 2139 6.654122 GCATTTTGCCAAAAAGATTAACGAA 58.346 32.000 6.70 0.00 38.62 3.85
1817 2161 3.270027 AGCCTTTTTGTTTTGGTTCTGC 58.730 40.909 0.00 0.00 0.00 4.26
1818 2162 2.354510 GCCTTTTTGTTTTGGTTCTGCC 59.645 45.455 0.00 0.00 37.90 4.85
1819 2163 2.942376 CCTTTTTGTTTTGGTTCTGCCC 59.058 45.455 0.00 0.00 36.04 5.36
1820 2164 2.700722 TTTTGTTTTGGTTCTGCCCC 57.299 45.000 0.00 0.00 36.04 5.80
1821 2165 1.872773 TTTGTTTTGGTTCTGCCCCT 58.127 45.000 0.00 0.00 36.04 4.79
1822 2166 1.118838 TTGTTTTGGTTCTGCCCCTG 58.881 50.000 0.00 0.00 36.04 4.45
1823 2167 1.367471 GTTTTGGTTCTGCCCCTGC 59.633 57.895 0.00 0.00 36.04 4.85
1824 2168 1.836604 TTTTGGTTCTGCCCCTGCC 60.837 57.895 0.00 0.00 36.33 4.85
1825 2169 3.826265 TTTGGTTCTGCCCCTGCCC 62.826 63.158 0.00 0.00 36.33 5.36
1897 2241 2.993449 TGCGTACACTTCATACACGA 57.007 45.000 0.00 0.00 34.66 4.35
1919 2263 1.128809 ACCCATCCACGTGGTTACCA 61.129 55.000 32.74 15.05 37.57 3.25
1977 2321 3.194005 TCTTGTTGTGGTTCTCTGTCC 57.806 47.619 0.00 0.00 0.00 4.02
2027 2371 8.841300 TGACATAGCACTAGTGAGATTTAGTAG 58.159 37.037 27.08 7.63 0.00 2.57
2028 2372 8.754991 ACATAGCACTAGTGAGATTTAGTAGT 57.245 34.615 27.08 8.19 35.28 2.73
2029 2373 9.848710 ACATAGCACTAGTGAGATTTAGTAGTA 57.151 33.333 27.08 0.63 33.65 1.82
2051 2395 1.672030 CCATTCACCGACAGCTGCA 60.672 57.895 15.27 0.00 0.00 4.41
2086 2430 2.884087 TTCAACTCCGCCGCGATCTC 62.884 60.000 15.93 0.00 0.00 2.75
2298 2646 5.402568 GCTGATCACTATAATGTGTACGTGG 59.597 44.000 0.00 0.00 38.90 4.94
2299 2647 5.838529 TGATCACTATAATGTGTACGTGGG 58.161 41.667 0.00 0.00 38.90 4.61
2340 2693 0.595825 GCTTGAAAGTGTGTGGCTGC 60.596 55.000 0.00 0.00 0.00 5.25
2600 2953 5.075858 TCCCGTAAGTGTGTTATTACAGG 57.924 43.478 0.00 0.00 34.24 4.00
2676 3031 6.937392 AGGTAAGAATTGGAGTGTCTTAGTC 58.063 40.000 0.00 0.00 35.17 2.59
2724 3079 7.176165 ACTTTGTGAATCATGTGATCAACTCAT 59.824 33.333 0.00 0.00 35.97 2.90
2865 3220 0.958382 CACCCAAATCCGAGCCGAAA 60.958 55.000 0.00 0.00 0.00 3.46
2878 3233 1.910671 AGCCGAAAATACCCACACCTA 59.089 47.619 0.00 0.00 0.00 3.08
2937 3292 3.869065 TGAACTTCCTATTGTAAGGCCG 58.131 45.455 0.00 0.00 36.51 6.13
2950 3305 0.037590 AAGGCCGATGGTAGCAAACA 59.962 50.000 0.00 0.00 0.00 2.83
2972 3327 5.648092 ACAAGTTAATCCTACTGCCAACATC 59.352 40.000 0.00 0.00 0.00 3.06
2996 3351 6.481976 TCATGGTTCTTGTAGTACAACTTGTG 59.518 38.462 11.75 2.54 33.96 3.33
3103 3462 2.441001 CAATCTCCCTTGCCCATCTAGT 59.559 50.000 0.00 0.00 0.00 2.57
3106 3465 3.941629 TCTCCCTTGCCCATCTAGTAAT 58.058 45.455 0.00 0.00 0.00 1.89
3109 3468 4.242811 TCCCTTGCCCATCTAGTAATCAT 58.757 43.478 0.00 0.00 0.00 2.45
3238 3598 6.204882 ACCAGCAAACTACTGTCTATTTGAAC 59.795 38.462 12.73 0.85 34.62 3.18
3247 3607 3.670625 TGTCTATTTGAACGGGAAGGTG 58.329 45.455 0.00 0.00 0.00 4.00
3253 3613 2.107950 TGAACGGGAAGGTGCATTAG 57.892 50.000 0.00 0.00 0.00 1.73
3267 3710 4.034510 GGTGCATTAGAAGTACATGACAGC 59.965 45.833 0.00 0.00 0.00 4.40
3316 3759 1.542915 CAGCCAGTCAATCCACCAAAG 59.457 52.381 0.00 0.00 0.00 2.77
3327 3770 6.930722 GTCAATCCACCAAAGTTGATTTTGAT 59.069 34.615 1.12 0.00 36.49 2.57
3369 3843 1.949847 CTCCCGACACGCATCCTCTT 61.950 60.000 0.00 0.00 0.00 2.85
3376 3850 1.202417 ACACGCATCCTCTTGATACCG 60.202 52.381 0.00 0.00 35.02 4.02
3667 4146 7.175467 TGAGATGCAGTTTTCTAATGTGACATT 59.825 33.333 15.80 15.80 0.00 2.71
3918 4397 9.461312 TTTGCTCCTCATACACATTTATAGTTT 57.539 29.630 0.00 0.00 0.00 2.66
4086 4574 3.944422 AGTCTGTTACTGTTTTGCACG 57.056 42.857 0.00 0.00 36.93 5.34
4345 4836 4.282195 ACATGTTCCTATGCTAGTCTAGGC 59.718 45.833 8.97 2.26 35.46 3.93
4393 4884 4.251268 CCTAGTCCTGGAAAAGTAAACGG 58.749 47.826 0.00 0.00 0.00 4.44
4472 4963 8.055181 GGAGCATTATATTAATCAAGGGATGGA 58.945 37.037 0.00 0.00 32.92 3.41
4489 4980 6.099845 AGGGATGGAGTTATTATGAAAGTCGT 59.900 38.462 0.00 0.00 0.00 4.34
4646 5137 8.571336 AGACATTTGGAAACATCTTTAGACAAG 58.429 33.333 0.00 0.00 42.32 3.16
4880 5375 6.039616 CCTAGAACTTGTATCTCTTGCAGTC 58.960 44.000 0.00 0.00 0.00 3.51
5057 5552 3.253188 GCAACAATCTTGGCAGAAGTGTA 59.747 43.478 5.00 0.00 32.63 2.90
5111 5606 9.880157 ATGAATTGATTGTCCCTTTCTAAATTG 57.120 29.630 0.00 0.00 0.00 2.32
5129 5624 5.828299 AATTGTCTTCCGAAACTTTGACA 57.172 34.783 0.00 0.00 33.41 3.58
5218 5713 2.809446 TCCGTAAACAGCATGATCTCG 58.191 47.619 0.00 0.00 39.69 4.04
5235 5730 8.507249 CATGATCTCGTACTGAACATATGTAGA 58.493 37.037 9.21 5.99 0.00 2.59
5376 5874 1.334869 CTGCTTTCTCGTTTGGTGCTT 59.665 47.619 0.00 0.00 0.00 3.91
5378 5876 1.600413 GCTTTCTCGTTTGGTGCTTGG 60.600 52.381 0.00 0.00 0.00 3.61
5536 6034 0.322456 TTCCTTGGTCCCAGCAATCG 60.322 55.000 0.00 0.00 34.84 3.34
5624 6122 6.865205 GTGTTTCAAAGAAATTAGCTGAGCAT 59.135 34.615 7.39 0.00 0.00 3.79
5741 6239 0.756294 ACTGTGTCCGTCATGAACCA 59.244 50.000 0.00 0.00 0.00 3.67
5744 6242 2.217750 TGTGTCCGTCATGAACCAAAG 58.782 47.619 0.00 0.00 0.00 2.77
5757 6255 2.038387 ACCAAAGGACCATGCGTATC 57.962 50.000 0.00 0.00 0.00 2.24
5765 6263 4.526970 AGGACCATGCGTATCTTTTTCAT 58.473 39.130 0.00 0.00 0.00 2.57
5796 6294 0.107831 TGGTGCCACTGAACAGTACC 59.892 55.000 14.73 14.73 40.20 3.34
5818 6316 1.004626 TGGCCCCTGAGATGGATGA 59.995 57.895 0.00 0.00 0.00 2.92
5830 6328 4.967442 TGAGATGGATGAACAGGAATCTCT 59.033 41.667 16.60 0.00 40.33 3.10
5831 6329 5.427806 TGAGATGGATGAACAGGAATCTCTT 59.572 40.000 16.60 0.00 40.33 2.85
5844 6342 5.531659 CAGGAATCTCTTTATGCAGCTGAAT 59.468 40.000 20.43 16.54 0.00 2.57
5881 6379 2.745100 ACTGATGCAGCCACAGCG 60.745 61.111 13.62 0.00 46.67 5.18
5906 6404 6.847792 GTCATGCACACTATTCGTCAAATATG 59.152 38.462 0.00 0.00 0.00 1.78
5926 6424 2.239402 TGTTGAGCTCTATCCATGGCAA 59.761 45.455 16.19 0.00 0.00 4.52
5954 6452 1.145119 GGACTTCCAAAACCTGGTCCT 59.855 52.381 0.00 0.00 46.51 3.85
6299 6797 2.579873 AGCACTGAAGTTTCACAGCAT 58.420 42.857 13.13 1.13 37.61 3.79
6457 6955 1.472480 ACCCAATATGCGTGAAACAGC 59.528 47.619 0.00 0.00 35.74 4.40
6494 6992 5.427481 TGAAAAGGTAGGAATAGGTACCCTG 59.573 44.000 8.74 0.00 39.79 4.45
6497 6995 5.230746 AGGTAGGAATAGGTACCCTGAAA 57.769 43.478 8.74 0.00 39.79 2.69
6524 7022 7.228108 TCTCACTTTTGGATATCTCATGCATTC 59.772 37.037 0.00 0.00 0.00 2.67
6528 7026 7.724506 ACTTTTGGATATCTCATGCATTCATCT 59.275 33.333 0.00 0.00 0.00 2.90
6577 7075 9.463443 ACTGTCTCAAAGCATTTTTATGTTTAC 57.537 29.630 0.00 0.00 35.03 2.01
6578 7076 9.683069 CTGTCTCAAAGCATTTTTATGTTTACT 57.317 29.630 0.00 0.00 35.03 2.24
6584 7082 9.353999 CAAAGCATTTTTATGTTTACTACTCCC 57.646 33.333 0.00 0.00 35.03 4.30
6585 7083 8.879427 AAGCATTTTTATGTTTACTACTCCCT 57.121 30.769 0.00 0.00 0.00 4.20
6586 7084 8.507524 AGCATTTTTATGTTTACTACTCCCTC 57.492 34.615 0.00 0.00 0.00 4.30
6587 7085 7.556635 AGCATTTTTATGTTTACTACTCCCTCC 59.443 37.037 0.00 0.00 0.00 4.30
6588 7086 7.466860 GCATTTTTATGTTTACTACTCCCTCCG 60.467 40.741 0.00 0.00 0.00 4.63
6589 7087 6.610075 TTTTATGTTTACTACTCCCTCCGT 57.390 37.500 0.00 0.00 0.00 4.69
6590 7088 6.610075 TTTATGTTTACTACTCCCTCCGTT 57.390 37.500 0.00 0.00 0.00 4.44
6591 7089 4.732672 ATGTTTACTACTCCCTCCGTTC 57.267 45.455 0.00 0.00 0.00 3.95
6592 7090 2.827921 TGTTTACTACTCCCTCCGTTCC 59.172 50.000 0.00 0.00 0.00 3.62
6593 7091 3.095332 GTTTACTACTCCCTCCGTTCCT 58.905 50.000 0.00 0.00 0.00 3.36
6594 7092 4.263905 TGTTTACTACTCCCTCCGTTCCTA 60.264 45.833 0.00 0.00 0.00 2.94
6595 7093 4.591321 TTACTACTCCCTCCGTTCCTAA 57.409 45.455 0.00 0.00 0.00 2.69
6596 7094 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
6597 7095 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
6598 7096 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
6599 7097 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
6600 7098 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
6601 7099 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
6602 7100 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
6603 7101 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
6604 7102 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
6605 7103 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
6606 7104 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
6607 7105 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
6608 7106 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
6609 7107 7.335924 CCTCCGTTCCTAAATATTTGTCTTTCA 59.664 37.037 11.05 0.00 0.00 2.69
6610 7108 8.624367 TCCGTTCCTAAATATTTGTCTTTCAA 57.376 30.769 11.05 0.00 0.00 2.69
6611 7109 8.726988 TCCGTTCCTAAATATTTGTCTTTCAAG 58.273 33.333 11.05 0.00 37.35 3.02
6612 7110 8.726988 CCGTTCCTAAATATTTGTCTTTCAAGA 58.273 33.333 11.05 0.00 37.35 3.02
6613 7111 9.760660 CGTTCCTAAATATTTGTCTTTCAAGAG 57.239 33.333 11.05 0.00 37.35 2.85
6624 7122 8.915871 TTTGTCTTTCAAGAGATTTCAACAAG 57.084 30.769 0.00 0.00 37.35 3.16
6625 7123 7.630242 TGTCTTTCAAGAGATTTCAACAAGT 57.370 32.000 0.00 0.00 35.32 3.16
6626 7124 7.475015 TGTCTTTCAAGAGATTTCAACAAGTG 58.525 34.615 0.00 0.00 35.32 3.16
6627 7125 7.336679 TGTCTTTCAAGAGATTTCAACAAGTGA 59.663 33.333 0.00 0.00 35.32 3.41
6628 7126 7.641802 GTCTTTCAAGAGATTTCAACAAGTGAC 59.358 37.037 0.00 0.00 33.66 3.67
6629 7127 7.554118 TCTTTCAAGAGATTTCAACAAGTGACT 59.446 33.333 0.00 0.00 35.39 3.41
6630 7128 8.731275 TTTCAAGAGATTTCAACAAGTGACTA 57.269 30.769 0.00 0.00 35.39 2.59
6631 7129 7.715265 TCAAGAGATTTCAACAAGTGACTAC 57.285 36.000 0.00 0.00 35.39 2.73
6632 7130 7.272244 TCAAGAGATTTCAACAAGTGACTACA 58.728 34.615 0.00 0.00 35.39 2.74
6633 7131 7.933577 TCAAGAGATTTCAACAAGTGACTACAT 59.066 33.333 0.00 0.00 35.39 2.29
6634 7132 9.208022 CAAGAGATTTCAACAAGTGACTACATA 57.792 33.333 0.00 0.00 35.39 2.29
6635 7133 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
6636 7134 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
6637 7135 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
6638 7136 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
6639 7137 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
6640 7138 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
6641 7139 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
6642 7140 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
6643 7141 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
6644 7142 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
6645 7143 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
6646 7144 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
6647 7145 4.630069 GTGACTACATACGGAGCAAAATGT 59.370 41.667 0.00 0.00 36.56 2.71
6648 7146 4.629634 TGACTACATACGGAGCAAAATGTG 59.370 41.667 0.00 0.00 34.54 3.21
6649 7147 4.575885 ACTACATACGGAGCAAAATGTGT 58.424 39.130 0.00 0.00 34.54 3.72
6650 7148 3.829886 ACATACGGAGCAAAATGTGTG 57.170 42.857 0.00 0.00 31.56 3.82
6651 7149 3.407698 ACATACGGAGCAAAATGTGTGA 58.592 40.909 0.00 0.00 31.56 3.58
6652 7150 3.818210 ACATACGGAGCAAAATGTGTGAA 59.182 39.130 0.00 0.00 31.56 3.18
6653 7151 4.458989 ACATACGGAGCAAAATGTGTGAAT 59.541 37.500 0.00 0.00 31.56 2.57
6654 7152 5.645929 ACATACGGAGCAAAATGTGTGAATA 59.354 36.000 0.00 0.00 31.56 1.75
6655 7153 6.318648 ACATACGGAGCAAAATGTGTGAATAT 59.681 34.615 0.00 0.00 31.56 1.28
6656 7154 7.497579 ACATACGGAGCAAAATGTGTGAATATA 59.502 33.333 0.00 0.00 31.56 0.86
6657 7155 6.942532 ACGGAGCAAAATGTGTGAATATAT 57.057 33.333 0.00 0.00 0.00 0.86
6658 7156 9.719355 ATACGGAGCAAAATGTGTGAATATATA 57.281 29.630 0.00 0.00 0.00 0.86
6659 7157 7.861630 ACGGAGCAAAATGTGTGAATATATAC 58.138 34.615 0.00 0.00 0.00 1.47
6660 7158 7.497579 ACGGAGCAAAATGTGTGAATATATACA 59.502 33.333 0.00 0.00 0.00 2.29
6661 7159 8.506437 CGGAGCAAAATGTGTGAATATATACAT 58.494 33.333 0.00 0.00 35.43 2.29
6662 7160 9.831737 GGAGCAAAATGTGTGAATATATACATC 57.168 33.333 0.42 0.00 32.97 3.06
6663 7161 9.831737 GAGCAAAATGTGTGAATATATACATCC 57.168 33.333 0.42 0.00 32.97 3.51
6664 7162 8.506437 AGCAAAATGTGTGAATATATACATCCG 58.494 33.333 0.42 0.00 32.97 4.18
6665 7163 8.289618 GCAAAATGTGTGAATATATACATCCGT 58.710 33.333 0.42 0.00 32.97 4.69
6670 7168 8.980143 TGTGTGAATATATACATCCGTATGTG 57.020 34.615 3.56 0.00 45.99 3.21
6671 7169 8.032451 TGTGTGAATATATACATCCGTATGTGG 58.968 37.037 3.56 0.00 45.99 4.17
6672 7170 8.033038 GTGTGAATATATACATCCGTATGTGGT 58.967 37.037 3.56 0.00 45.99 4.16
6673 7171 9.245481 TGTGAATATATACATCCGTATGTGGTA 57.755 33.333 3.56 0.00 45.99 3.25
6674 7172 9.731819 GTGAATATATACATCCGTATGTGGTAG 57.268 37.037 3.56 0.00 45.99 3.18
6675 7173 9.470399 TGAATATATACATCCGTATGTGGTAGT 57.530 33.333 3.56 0.00 45.99 2.73
6676 7174 9.947669 GAATATATACATCCGTATGTGGTAGTC 57.052 37.037 3.56 0.09 45.99 2.59
6677 7175 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
6678 7176 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
6679 7177 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
6680 7178 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
6681 7179 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
6682 7180 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
6683 7181 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
6684 7182 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
6685 7183 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
6686 7184 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
6687 7185 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
6688 7186 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
6689 7187 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
6690 7188 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
6691 7189 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
6692 7190 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
6693 7191 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
6694 7192 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
6695 7193 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
6718 7216 8.919777 AAAGATAAATATTTAGGAACCGAGGG 57.080 34.615 13.15 0.00 0.00 4.30
6719 7217 7.867160 AGATAAATATTTAGGAACCGAGGGA 57.133 36.000 13.15 0.00 0.00 4.20
6720 7218 7.908453 AGATAAATATTTAGGAACCGAGGGAG 58.092 38.462 13.15 0.00 0.00 4.30
6721 7219 5.970501 AAATATTTAGGAACCGAGGGAGT 57.029 39.130 0.00 0.00 0.00 3.85
6722 7220 8.731591 ATAAATATTTAGGAACCGAGGGAGTA 57.268 34.615 13.15 0.00 0.00 2.59
6723 7221 7.628501 AAATATTTAGGAACCGAGGGAGTAT 57.371 36.000 0.00 0.00 0.00 2.12
6724 7222 8.731591 AAATATTTAGGAACCGAGGGAGTATA 57.268 34.615 0.00 0.00 0.00 1.47
6725 7223 8.912614 AATATTTAGGAACCGAGGGAGTATAT 57.087 34.615 0.00 0.00 0.00 0.86
6726 7224 6.607004 ATTTAGGAACCGAGGGAGTATATG 57.393 41.667 0.00 0.00 0.00 1.78
6727 7225 2.890814 AGGAACCGAGGGAGTATATGG 58.109 52.381 0.00 0.00 0.00 2.74
6728 7226 1.275573 GGAACCGAGGGAGTATATGGC 59.724 57.143 0.00 0.00 0.00 4.40
6729 7227 2.249139 GAACCGAGGGAGTATATGGCT 58.751 52.381 0.00 0.00 0.00 4.75
6730 7228 3.428532 GAACCGAGGGAGTATATGGCTA 58.571 50.000 0.00 0.00 0.00 3.93
6731 7229 3.088789 ACCGAGGGAGTATATGGCTAG 57.911 52.381 0.00 0.00 0.00 3.42
6732 7230 1.751924 CCGAGGGAGTATATGGCTAGC 59.248 57.143 6.04 6.04 0.00 3.42
6733 7231 2.621929 CCGAGGGAGTATATGGCTAGCT 60.622 54.545 15.72 0.00 0.00 3.32
6734 7232 3.371702 CCGAGGGAGTATATGGCTAGCTA 60.372 52.174 15.72 9.47 0.00 3.32
7010 7509 5.183530 TCCTGATCAATCAACCAGTGAAT 57.816 39.130 0.00 0.00 40.50 2.57
7035 7534 0.827507 AAGCAACCAGGCCACGATTT 60.828 50.000 5.01 0.00 0.00 2.17
7093 7592 1.376466 CAGACAGTGGGACCAAGGG 59.624 63.158 0.00 0.00 0.00 3.95
7095 7594 0.401395 AGACAGTGGGACCAAGGGAA 60.401 55.000 0.00 0.00 0.00 3.97
7096 7595 0.698818 GACAGTGGGACCAAGGGAAT 59.301 55.000 0.00 0.00 0.00 3.01
7097 7596 1.913419 GACAGTGGGACCAAGGGAATA 59.087 52.381 0.00 0.00 0.00 1.75
7098 7597 2.307686 GACAGTGGGACCAAGGGAATAA 59.692 50.000 0.00 0.00 0.00 1.40
7099 7598 2.308866 ACAGTGGGACCAAGGGAATAAG 59.691 50.000 0.00 0.00 0.00 1.73
7100 7599 1.923148 AGTGGGACCAAGGGAATAAGG 59.077 52.381 0.00 0.00 0.00 2.69
7164 7669 8.795842 ATATACTCTCTTAGGTATGAAGACGG 57.204 38.462 0.00 0.00 31.98 4.79
7208 7713 4.037565 ACTCGAAAGGAATTTGTCAAACCC 59.962 41.667 0.00 5.40 0.00 4.11
7214 7719 5.010708 AGGAATTTGTCAAACCCCACTAT 57.989 39.130 15.99 0.00 0.00 2.12
7229 7734 2.430465 CACTATGAAGCAAGGCACACT 58.570 47.619 0.00 0.00 0.00 3.55
7294 7799 6.582636 TCCAGAAGCGAAATTATGATACTGT 58.417 36.000 0.00 0.00 0.00 3.55
7431 7936 5.255443 ACTCCTAAAGGGTATGGGACAAATT 59.745 40.000 0.00 0.00 38.08 1.82
7432 7937 6.160483 TCCTAAAGGGTATGGGACAAATTT 57.840 37.500 0.00 0.00 38.08 1.82
7449 7954 7.246171 ACAAATTTAAGACTAGCCTCTGAGA 57.754 36.000 6.17 0.00 0.00 3.27
7481 7986 2.158769 TCAAAGCAGCACAAGAGGAAGA 60.159 45.455 0.00 0.00 0.00 2.87
7570 8075 5.411831 TCTGTGAGAGATACAAAGCATGT 57.588 39.130 0.00 0.67 46.36 3.21
7756 8261 0.534203 TCCGTCCCTGTCACAAAAGC 60.534 55.000 0.00 0.00 0.00 3.51
7995 8502 7.926555 TGTAGTCTTAGCCTTGAAATATGCTAC 59.073 37.037 0.00 0.00 36.14 3.58
8086 8682 5.874261 AGGTTTGTTTTTGTTCAATGGTCAG 59.126 36.000 0.00 0.00 0.00 3.51
8108 8704 6.705825 TCAGCTTCGCATGCTTATTTATCTTA 59.294 34.615 17.13 0.00 38.92 2.10
8109 8705 7.014115 CAGCTTCGCATGCTTATTTATCTTAG 58.986 38.462 17.13 0.00 38.92 2.18
8223 8825 1.134250 GGAGATGAAGAGCAGTTCCCC 60.134 57.143 0.00 0.00 30.59 4.81
8262 8864 2.520979 CGCTGAGACTTACAGTAGCAC 58.479 52.381 0.00 0.00 37.64 4.40
8316 8920 7.881775 AAGAAGAGTTAACCAGTTGATGTTT 57.118 32.000 0.88 0.00 0.00 2.83
8317 8921 7.264373 AGAAGAGTTAACCAGTTGATGTTTG 57.736 36.000 0.88 0.00 0.00 2.93
8556 9161 1.461127 CTTTCTGCTACCGTGAACTGC 59.539 52.381 0.00 0.00 0.00 4.40
8566 9171 1.063469 CCGTGAACTGCGAAAGTGTTT 59.937 47.619 0.00 0.00 39.81 2.83
8736 9348 6.095432 TGATTATGAAAAAGGGTGTGGTTG 57.905 37.500 0.00 0.00 0.00 3.77
8738 9350 0.827368 TGAAAAAGGGTGTGGTTGGC 59.173 50.000 0.00 0.00 0.00 4.52
8742 9354 0.553819 AAAGGGTGTGGTTGGCACTA 59.446 50.000 0.00 0.00 37.07 2.74
8984 9697 3.621268 GTGTCTCAACTGTTGCTACACAA 59.379 43.478 31.19 12.05 41.52 3.33
8985 9698 3.871006 TGTCTCAACTGTTGCTACACAAG 59.129 43.478 15.52 6.27 39.50 3.16
8986 9699 3.871594 GTCTCAACTGTTGCTACACAAGT 59.128 43.478 15.52 0.00 39.50 3.16
8987 9700 5.047847 GTCTCAACTGTTGCTACACAAGTA 58.952 41.667 15.52 0.00 39.50 2.24
8988 9701 5.047847 TCTCAACTGTTGCTACACAAGTAC 58.952 41.667 15.52 0.00 39.50 2.73
8989 9702 5.018539 TCAACTGTTGCTACACAAGTACT 57.981 39.130 15.52 0.00 39.50 2.73
8990 9703 5.047847 TCAACTGTTGCTACACAAGTACTC 58.952 41.667 15.52 0.00 39.50 2.59
8991 9704 3.991367 ACTGTTGCTACACAAGTACTCC 58.009 45.455 0.00 0.00 39.50 3.85
8992 9705 3.386726 ACTGTTGCTACACAAGTACTCCA 59.613 43.478 0.00 0.00 39.50 3.86
8993 9706 4.141801 ACTGTTGCTACACAAGTACTCCAA 60.142 41.667 0.00 0.00 39.50 3.53
8994 9707 4.771903 TGTTGCTACACAAGTACTCCAAA 58.228 39.130 0.00 0.00 39.50 3.28
8995 9708 4.573201 TGTTGCTACACAAGTACTCCAAAC 59.427 41.667 0.00 0.00 39.50 2.93
8996 9709 4.682778 TGCTACACAAGTACTCCAAACT 57.317 40.909 0.00 0.00 0.00 2.66
8997 9710 4.628074 TGCTACACAAGTACTCCAAACTC 58.372 43.478 0.00 0.00 0.00 3.01
8998 9711 4.344102 TGCTACACAAGTACTCCAAACTCT 59.656 41.667 0.00 0.00 0.00 3.24
8999 9712 4.686554 GCTACACAAGTACTCCAAACTCTG 59.313 45.833 0.00 0.00 0.00 3.35
9000 9713 4.755266 ACACAAGTACTCCAAACTCTGT 57.245 40.909 0.00 0.00 0.00 3.41
9001 9714 4.442706 ACACAAGTACTCCAAACTCTGTG 58.557 43.478 15.23 15.23 39.35 3.66
9002 9715 4.081087 ACACAAGTACTCCAAACTCTGTGT 60.081 41.667 16.28 16.28 40.39 3.72
9003 9716 4.508124 CACAAGTACTCCAAACTCTGTGTC 59.492 45.833 10.54 0.00 34.67 3.67
9004 9717 4.406003 ACAAGTACTCCAAACTCTGTGTCT 59.594 41.667 0.00 0.00 0.00 3.41
9005 9718 5.104900 ACAAGTACTCCAAACTCTGTGTCTT 60.105 40.000 0.00 0.00 0.00 3.01
9006 9719 6.097839 ACAAGTACTCCAAACTCTGTGTCTTA 59.902 38.462 0.00 0.00 0.00 2.10
9007 9720 6.726490 AGTACTCCAAACTCTGTGTCTTAA 57.274 37.500 0.00 0.00 0.00 1.85
9045 9780 1.771854 TCTAAGGGCACAACTCCAACA 59.228 47.619 0.00 0.00 0.00 3.33
9053 9788 0.465460 ACAACTCCAACACCATGCGT 60.465 50.000 0.00 0.00 0.00 5.24
9066 9801 1.067706 CCATGCGTCAAAATGCCTCAA 60.068 47.619 0.00 0.00 36.52 3.02
9068 9803 3.255725 CATGCGTCAAAATGCCTCAAAT 58.744 40.909 0.00 0.00 36.52 2.32
9069 9804 2.674954 TGCGTCAAAATGCCTCAAATG 58.325 42.857 0.00 0.00 36.52 2.32
9070 9805 1.391144 GCGTCAAAATGCCTCAAATGC 59.609 47.619 0.00 0.00 0.00 3.56
9071 9806 2.927871 GCGTCAAAATGCCTCAAATGCT 60.928 45.455 0.00 0.00 0.00 3.79
9072 9807 3.319755 CGTCAAAATGCCTCAAATGCTT 58.680 40.909 0.00 0.00 0.00 3.91
9073 9808 4.484236 CGTCAAAATGCCTCAAATGCTTA 58.516 39.130 0.00 0.00 0.00 3.09
9074 9809 4.922692 CGTCAAAATGCCTCAAATGCTTAA 59.077 37.500 0.00 0.00 0.00 1.85
9075 9810 5.404968 CGTCAAAATGCCTCAAATGCTTAAA 59.595 36.000 0.00 0.00 0.00 1.52
9076 9811 6.091169 CGTCAAAATGCCTCAAATGCTTAAAT 59.909 34.615 0.00 0.00 0.00 1.40
9077 9812 7.360269 CGTCAAAATGCCTCAAATGCTTAAATT 60.360 33.333 0.00 0.00 0.00 1.82
9090 9825 5.216566 TGCTTAAATTATGCAGTGTCGAC 57.783 39.130 9.11 9.11 34.42 4.20
9103 9838 1.069227 GTGTCGACACCTTTTGCCATC 60.069 52.381 33.62 7.97 40.85 3.51
9104 9839 1.202758 TGTCGACACCTTTTGCCATCT 60.203 47.619 15.76 0.00 0.00 2.90
9109 9844 3.731867 CGACACCTTTTGCCATCTAATGC 60.732 47.826 0.00 0.00 0.00 3.56
9111 9846 1.750778 ACCTTTTGCCATCTAATGCCG 59.249 47.619 0.00 0.00 0.00 5.69
9127 9862 1.868997 CCGTGCATCAACTGTCCAC 59.131 57.895 0.00 0.00 0.00 4.02
9135 9870 4.455533 TGCATCAACTGTCCACTAAATGTC 59.544 41.667 0.00 0.00 0.00 3.06
9142 9877 2.550606 TGTCCACTAAATGTCCGCAAAC 59.449 45.455 0.00 0.00 0.00 2.93
9171 9906 3.222603 ACCCCACAAACTAGAAGCAAAG 58.777 45.455 0.00 0.00 0.00 2.77
9202 9937 4.077184 CGGGCGCCTGGTTCTACA 62.077 66.667 28.47 0.00 0.00 2.74
9209 9944 2.632377 CGCCTGGTTCTACATCATGTT 58.368 47.619 0.00 0.00 0.00 2.71
9212 9947 3.873801 GCCTGGTTCTACATCATGTTGGT 60.874 47.826 0.00 0.95 0.00 3.67
9231 9966 1.997606 GTGTTCGACAATTAGGACCCG 59.002 52.381 0.00 0.00 0.00 5.28
9232 9967 1.619827 TGTTCGACAATTAGGACCCGT 59.380 47.619 0.00 0.00 0.00 5.28
9236 9971 2.424601 TCGACAATTAGGACCCGTACAG 59.575 50.000 0.00 0.00 0.00 2.74
9245 9980 2.113807 GGACCCGTACAGAACCCTATT 58.886 52.381 0.00 0.00 0.00 1.73
9246 9981 2.502947 GGACCCGTACAGAACCCTATTT 59.497 50.000 0.00 0.00 0.00 1.40
9247 9982 3.054875 GGACCCGTACAGAACCCTATTTT 60.055 47.826 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.451150 GCGACACAGCCCCGATCA 62.451 66.667 0.00 0.00 0.00 2.92
144 154 3.503748 GGATTAGCCATAAAGCGCATCTT 59.496 43.478 11.47 1.91 38.01 2.40
162 172 2.998186 TGGATGGATGGATGGATGGATT 59.002 45.455 0.00 0.00 0.00 3.01
163 173 2.651190 TGGATGGATGGATGGATGGAT 58.349 47.619 0.00 0.00 0.00 3.41
164 174 2.136974 TGGATGGATGGATGGATGGA 57.863 50.000 0.00 0.00 0.00 3.41
165 175 2.682858 CGATGGATGGATGGATGGATGG 60.683 54.545 0.00 0.00 0.00 3.51
166 176 2.640184 CGATGGATGGATGGATGGATG 58.360 52.381 0.00 0.00 0.00 3.51
167 177 1.064906 GCGATGGATGGATGGATGGAT 60.065 52.381 0.00 0.00 0.00 3.41
168 178 0.325933 GCGATGGATGGATGGATGGA 59.674 55.000 0.00 0.00 0.00 3.41
169 179 0.679002 GGCGATGGATGGATGGATGG 60.679 60.000 0.00 0.00 0.00 3.51
170 180 0.037160 TGGCGATGGATGGATGGATG 59.963 55.000 0.00 0.00 0.00 3.51
598 608 4.781616 CCCATGCCCATGCCACCA 62.782 66.667 2.75 0.00 37.49 4.17
688 703 0.178929 ATAGGGGAAGGTAGCGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
689 704 1.160702 TATAGGGGAAGGTAGCGGGA 58.839 55.000 0.00 0.00 0.00 5.14
690 705 2.019807 TTATAGGGGAAGGTAGCGGG 57.980 55.000 0.00 0.00 0.00 6.13
691 706 3.868754 GCATTTATAGGGGAAGGTAGCGG 60.869 52.174 0.00 0.00 0.00 5.52
692 707 3.335579 GCATTTATAGGGGAAGGTAGCG 58.664 50.000 0.00 0.00 0.00 4.26
693 708 3.335579 CGCATTTATAGGGGAAGGTAGC 58.664 50.000 0.00 0.00 0.00 3.58
694 709 3.868754 GCCGCATTTATAGGGGAAGGTAG 60.869 52.174 0.00 0.00 41.25 3.18
695 710 2.039348 GCCGCATTTATAGGGGAAGGTA 59.961 50.000 0.00 0.00 41.25 3.08
696 711 1.202891 GCCGCATTTATAGGGGAAGGT 60.203 52.381 0.00 0.00 41.25 3.50
718 733 1.146263 GGTTGCCGTCCCTATCTGG 59.854 63.158 0.00 0.00 0.00 3.86
733 748 0.252927 CCAGGGAGGAGGAAGAGGTT 60.253 60.000 0.00 0.00 41.22 3.50
734 749 1.394151 CCAGGGAGGAGGAAGAGGT 59.606 63.158 0.00 0.00 41.22 3.85
739 757 2.041265 GAGCCCAGGGAGGAGGAA 59.959 66.667 10.89 0.00 41.22 3.36
748 766 2.115266 AAAACCCACGAGCCCAGG 59.885 61.111 0.00 0.00 0.00 4.45
750 768 1.076632 AACAAAACCCACGAGCCCA 60.077 52.632 0.00 0.00 0.00 5.36
751 769 1.104577 TGAACAAAACCCACGAGCCC 61.105 55.000 0.00 0.00 0.00 5.19
777 795 4.101448 CAACCCTCTCCCTGCGGG 62.101 72.222 3.88 3.88 46.03 6.13
779 797 3.672295 GAGCAACCCTCTCCCTGCG 62.672 68.421 0.00 0.00 39.80 5.18
781 799 2.581354 CGAGCAACCCTCTCCCTG 59.419 66.667 0.00 0.00 38.49 4.45
782 800 2.685380 CCGAGCAACCCTCTCCCT 60.685 66.667 0.00 0.00 38.49 4.20
784 802 0.673956 GTTTCCGAGCAACCCTCTCC 60.674 60.000 0.00 0.00 38.49 3.71
785 803 0.673956 GGTTTCCGAGCAACCCTCTC 60.674 60.000 0.00 0.00 38.23 3.20
786 804 1.375326 GGTTTCCGAGCAACCCTCT 59.625 57.895 0.00 0.00 38.23 3.69
787 805 3.982829 GGTTTCCGAGCAACCCTC 58.017 61.111 0.00 0.00 38.23 4.30
819 851 4.728110 GGGTTGGGTGGGTACGCC 62.728 72.222 7.55 0.31 46.77 5.68
911 945 1.442526 CGCCTGCTTATTCTGGGCTG 61.443 60.000 0.00 0.00 40.52 4.85
912 946 1.153086 CGCCTGCTTATTCTGGGCT 60.153 57.895 0.00 0.00 40.52 5.19
913 947 0.536006 ATCGCCTGCTTATTCTGGGC 60.536 55.000 0.00 0.00 39.43 5.36
914 948 1.876156 GAATCGCCTGCTTATTCTGGG 59.124 52.381 6.76 0.00 0.00 4.45
915 949 1.876156 GGAATCGCCTGCTTATTCTGG 59.124 52.381 11.43 0.00 31.66 3.86
939 973 2.089201 GACGGTAATGGAAGGGGTTTG 58.911 52.381 0.00 0.00 0.00 2.93
942 976 0.253020 AGGACGGTAATGGAAGGGGT 60.253 55.000 0.00 0.00 0.00 4.95
985 1019 2.443394 CCATGGGAAGGCTAGGCGA 61.443 63.158 11.10 0.00 0.00 5.54
1168 1208 2.353607 GATCCTCCGCGCGTAGTG 60.354 66.667 29.95 16.08 43.41 2.74
1229 1269 1.149148 AGAAGAAAAGAGCGTTCGGC 58.851 50.000 0.00 0.00 44.05 5.54
1230 1270 2.800544 TGAAGAAGAAAAGAGCGTTCGG 59.199 45.455 0.00 0.00 0.00 4.30
1231 1271 3.491267 ACTGAAGAAGAAAAGAGCGTTCG 59.509 43.478 0.00 0.00 0.00 3.95
1232 1272 5.411083 AACTGAAGAAGAAAAGAGCGTTC 57.589 39.130 0.00 0.00 0.00 3.95
1343 1666 1.000506 AGAGCGACGGAAGCAAAGTAA 59.999 47.619 0.00 0.00 37.01 2.24
1344 1667 0.601558 AGAGCGACGGAAGCAAAGTA 59.398 50.000 0.00 0.00 37.01 2.24
1385 1708 7.128331 CCGATGTCTTTGAAATGTATAGCAAG 58.872 38.462 0.00 0.00 0.00 4.01
1387 1710 5.527214 CCCGATGTCTTTGAAATGTATAGCA 59.473 40.000 0.00 0.00 0.00 3.49
1388 1711 5.527582 ACCCGATGTCTTTGAAATGTATAGC 59.472 40.000 0.00 0.00 0.00 2.97
1389 1712 7.553881 AACCCGATGTCTTTGAAATGTATAG 57.446 36.000 0.00 0.00 0.00 1.31
1390 1713 7.713507 CCTAACCCGATGTCTTTGAAATGTATA 59.286 37.037 0.00 0.00 0.00 1.47
1391 1714 6.542370 CCTAACCCGATGTCTTTGAAATGTAT 59.458 38.462 0.00 0.00 0.00 2.29
1426 1749 7.042925 ACGACGCAATTAATCAAGGAATAGTAC 60.043 37.037 0.00 0.00 0.00 2.73
1429 1752 6.287107 ACGACGCAATTAATCAAGGAATAG 57.713 37.500 0.00 0.00 0.00 1.73
1455 1778 3.488721 GCGATTAGTTTAGCTCCTCGTCA 60.489 47.826 0.00 0.00 35.20 4.35
1506 1847 2.907458 ACAGAAATCCTTGGGGAAGG 57.093 50.000 0.00 0.00 45.78 3.46
1512 1853 8.258007 TCTACAGTACATAACAGAAATCCTTGG 58.742 37.037 0.00 0.00 0.00 3.61
1584 1925 3.312421 CCGTGACAAGCAGAAGAAAGAAA 59.688 43.478 0.00 0.00 0.00 2.52
1585 1926 2.872245 CCGTGACAAGCAGAAGAAAGAA 59.128 45.455 0.00 0.00 0.00 2.52
1586 1927 2.158957 ACCGTGACAAGCAGAAGAAAGA 60.159 45.455 0.00 0.00 0.00 2.52
1587 1928 2.213499 ACCGTGACAAGCAGAAGAAAG 58.787 47.619 0.00 0.00 0.00 2.62
1591 1932 1.269778 TGAGACCGTGACAAGCAGAAG 60.270 52.381 0.00 0.00 0.00 2.85
1701 2042 3.211045 TGGATTTCGTAAAGCATAGGGC 58.789 45.455 0.00 0.00 45.30 5.19
1704 2045 9.274065 GTAAAAGTTGGATTTCGTAAAGCATAG 57.726 33.333 0.00 0.00 0.00 2.23
1738 2082 1.172175 CCCTCTGAAAGAAAGCCTGC 58.828 55.000 0.00 0.00 46.34 4.85
1792 2136 4.629634 AGAACCAAAACAAAAAGGCTTTCG 59.370 37.500 13.76 10.16 0.00 3.46
1793 2137 5.673568 GCAGAACCAAAACAAAAAGGCTTTC 60.674 40.000 13.76 0.00 0.00 2.62
1794 2138 4.155826 GCAGAACCAAAACAAAAAGGCTTT 59.844 37.500 6.68 6.68 0.00 3.51
1795 2139 3.689161 GCAGAACCAAAACAAAAAGGCTT 59.311 39.130 0.00 0.00 0.00 4.35
1826 2170 4.864334 GATCACGGGCAGGGGCAG 62.864 72.222 0.00 0.00 43.71 4.85
1833 2177 3.974835 AAGCATGCGATCACGGGCA 62.975 57.895 13.01 0.00 44.29 5.36
1897 2241 1.065709 GTAACCACGTGGATGGGTCAT 60.066 52.381 40.21 13.26 44.81 3.06
1919 2263 2.653726 TGATCAGTTGCCACACTGTTT 58.346 42.857 0.00 0.00 44.10 2.83
1977 2321 1.030488 CCTCTGCAAGCTGTGATGGG 61.030 60.000 0.00 0.00 0.00 4.00
2027 2371 2.135933 GCTGTCGGTGAATGGCTATAC 58.864 52.381 0.00 0.00 0.00 1.47
2028 2372 2.039418 AGCTGTCGGTGAATGGCTATA 58.961 47.619 0.00 0.00 0.00 1.31
2029 2373 0.833287 AGCTGTCGGTGAATGGCTAT 59.167 50.000 0.00 0.00 0.00 2.97
2086 2430 5.139435 TCTAATGCGATCTGGGAACATAG 57.861 43.478 0.00 0.00 41.51 2.23
2156 2504 5.978919 ACGTCAAAGTACGATTCAAACAGTA 59.021 36.000 3.10 0.00 45.68 2.74
2298 2646 5.007724 GCAATTCCAGCTATACAAGTACACC 59.992 44.000 0.00 0.00 0.00 4.16
2299 2647 5.817816 AGCAATTCCAGCTATACAAGTACAC 59.182 40.000 0.00 0.00 41.32 2.90
2340 2693 8.961634 TGCAGAAGTAGTGCCTATAAGATATAG 58.038 37.037 0.00 0.00 40.43 1.31
2367 2720 6.255887 GGAAACATTTATGACACGACTCCTAG 59.744 42.308 0.00 0.00 0.00 3.02
2600 2953 3.604582 AGTGCAAGAATAGAGAACTGGC 58.395 45.455 0.00 0.00 0.00 4.85
2676 3031 3.074412 GACCAATCAACCAGTACAGGTG 58.926 50.000 11.15 2.46 42.25 4.00
2724 3079 8.474025 GGAATAACATCCCATTATGTCACAAAA 58.526 33.333 0.00 0.00 39.16 2.44
2793 3148 3.181416 ACCTAGTCCCCTCCTAGCTATTG 60.181 52.174 0.00 0.00 32.29 1.90
2865 3220 2.047769 TGGTGGTAGGTGTGGGTATT 57.952 50.000 0.00 0.00 0.00 1.89
2878 3233 6.380079 AACTGATCTAGATTCTTTGGTGGT 57.620 37.500 6.70 0.00 0.00 4.16
2937 3292 6.759497 AGGATTAACTTGTTTGCTACCATC 57.241 37.500 0.00 0.00 0.00 3.51
2950 3305 5.815581 TGATGTTGGCAGTAGGATTAACTT 58.184 37.500 0.00 0.00 0.00 2.66
2972 3327 6.260050 ACACAAGTTGTACTACAAGAACCATG 59.740 38.462 8.49 2.75 39.00 3.66
2996 3351 9.495754 GAGATAGAAAGCATTGTTTCAACATAC 57.504 33.333 11.60 0.00 38.66 2.39
3103 3462 4.489737 AGTCGGATGGGGTCTAATGATTA 58.510 43.478 0.00 0.00 0.00 1.75
3106 3465 2.434336 CAAGTCGGATGGGGTCTAATGA 59.566 50.000 0.00 0.00 0.00 2.57
3109 3468 2.241281 TCAAGTCGGATGGGGTCTAA 57.759 50.000 0.00 0.00 0.00 2.10
3143 3502 7.361286 CCCAGCTACATTACTTTTCTCTGTTTC 60.361 40.741 0.00 0.00 0.00 2.78
3156 3515 1.070914 GAGGCTCCCCAGCTACATTAC 59.929 57.143 2.15 0.00 46.03 1.89
3238 3598 2.403252 ACTTCTAATGCACCTTCCCG 57.597 50.000 0.00 0.00 0.00 5.14
3247 3607 4.631377 TGTGCTGTCATGTACTTCTAATGC 59.369 41.667 0.00 0.00 0.00 3.56
3253 3613 5.149273 CAATTGTGTGCTGTCATGTACTTC 58.851 41.667 0.00 0.00 0.00 3.01
3267 3710 5.518487 GTGTCCCAGTAAAAACAATTGTGTG 59.482 40.000 12.82 3.47 38.27 3.82
3369 3843 0.033503 TGAGAGGAGTGGCGGTATCA 60.034 55.000 0.00 0.00 0.00 2.15
3376 3850 0.687354 TGGAAGTTGAGAGGAGTGGC 59.313 55.000 0.00 0.00 0.00 5.01
3482 3956 1.402968 CAAGCAAGCAGACAACACTGT 59.597 47.619 0.00 0.00 39.73 3.55
3555 4030 9.218440 GAACCACAAAAATGATTGTATTGGATT 57.782 29.630 2.91 0.00 41.44 3.01
3556 4031 8.596293 AGAACCACAAAAATGATTGTATTGGAT 58.404 29.630 2.91 0.00 41.44 3.41
3557 4032 7.871973 CAGAACCACAAAAATGATTGTATTGGA 59.128 33.333 2.91 0.00 41.44 3.53
3558 4033 7.656948 ACAGAACCACAAAAATGATTGTATTGG 59.343 33.333 0.00 0.00 41.44 3.16
3560 4035 7.656948 CCACAGAACCACAAAAATGATTGTATT 59.343 33.333 0.00 0.00 41.44 1.89
3562 4037 6.511416 CCACAGAACCACAAAAATGATTGTA 58.489 36.000 0.00 0.00 41.44 2.41
3667 4146 8.846211 CCTAACCAGTCAAACAAAGAAGAAATA 58.154 33.333 0.00 0.00 0.00 1.40
3679 4158 7.506328 AATACAAAGACCTAACCAGTCAAAC 57.494 36.000 0.00 0.00 36.68 2.93
3776 4255 8.862325 AAACATCATCAATCAAAGTACTACCA 57.138 30.769 0.00 0.00 0.00 3.25
3918 4397 7.287061 TCATAGTTTTCCCAGACTTCTGAAAA 58.713 34.615 7.87 5.04 46.59 2.29
3980 4468 9.249457 CCAAGGATTTGTTAAAAGAGAAGAAAC 57.751 33.333 0.00 0.00 32.21 2.78
4086 4574 4.700213 TGAAAATTTAGAGGCAGCTACCAC 59.300 41.667 5.58 0.00 0.00 4.16
4313 4804 5.439721 AGCATAGGAACATGTTGAGCATTA 58.560 37.500 17.58 0.00 35.19 1.90
4332 4823 4.473477 AAAAGAACGCCTAGACTAGCAT 57.527 40.909 3.76 0.00 0.00 3.79
4472 4963 9.624373 TCCTAGTAGACGACTTTCATAATAACT 57.376 33.333 0.00 0.00 39.81 2.24
4489 4980 3.772387 CCCATGATGAGCTCCTAGTAGA 58.228 50.000 12.15 0.00 0.00 2.59
4602 5093 8.396390 CAAATGTCTGAGATAAGTCATTCCTTG 58.604 37.037 0.00 0.00 35.69 3.61
4646 5137 5.009610 TGGAGACAAAGTATCAGTTTTTGCC 59.990 40.000 0.00 0.00 37.44 4.52
4860 5355 4.486090 TCGACTGCAAGAGATACAAGTTC 58.514 43.478 0.00 0.00 37.43 3.01
4880 5375 3.181514 CGCCAGGTACATTTAAACCTTCG 60.182 47.826 0.00 0.00 43.77 3.79
5111 5606 4.976987 TGTTTGTCAAAGTTTCGGAAGAC 58.023 39.130 0.00 1.38 41.84 3.01
5283 5780 2.032681 AGTCCCTCGCCAGCAAAC 59.967 61.111 0.00 0.00 0.00 2.93
5376 5874 5.774690 ACATAAGAATTTGACCAAGCTTCCA 59.225 36.000 0.00 0.00 0.00 3.53
5378 5876 7.755373 GGTAACATAAGAATTTGACCAAGCTTC 59.245 37.037 0.00 0.00 0.00 3.86
5624 6122 5.176774 CACGTTTATTCTGACACTTACTGCA 59.823 40.000 0.00 0.00 0.00 4.41
5701 6199 3.873952 GTGGGATAATCTTGCACTCAGAC 59.126 47.826 0.00 0.00 0.00 3.51
5741 6239 4.764823 TGAAAAAGATACGCATGGTCCTTT 59.235 37.500 0.00 2.63 34.88 3.11
5744 6242 4.335315 TCATGAAAAAGATACGCATGGTCC 59.665 41.667 0.00 0.00 37.51 4.46
5757 6255 8.445493 GGCACCATTTCTATTTTCATGAAAAAG 58.555 33.333 31.39 26.54 42.71 2.27
5765 6263 5.076182 TCAGTGGCACCATTTCTATTTTCA 58.924 37.500 15.27 0.00 0.00 2.69
5796 6294 1.152819 CCATCTCAGGGGCCACATG 60.153 63.158 8.31 0.93 0.00 3.21
5818 6316 4.639310 CAGCTGCATAAAGAGATTCCTGTT 59.361 41.667 0.00 0.00 0.00 3.16
5830 6328 6.182627 CCCATATAGGATTCAGCTGCATAAA 58.817 40.000 9.47 0.00 41.22 1.40
5831 6329 5.251468 ACCCATATAGGATTCAGCTGCATAA 59.749 40.000 9.47 0.00 41.22 1.90
5844 6342 5.665360 TCAGTGATTTGTCACCCATATAGGA 59.335 40.000 5.04 0.00 41.26 2.94
5870 6368 4.471726 GCATGACGCTGTGGCTGC 62.472 66.667 0.00 0.00 37.77 5.25
5881 6379 4.661993 TTTGACGAATAGTGTGCATGAC 57.338 40.909 0.00 0.00 0.00 3.06
5906 6404 2.627515 TGCCATGGATAGAGCTCAAC 57.372 50.000 18.40 6.39 0.00 3.18
5926 6424 6.840780 CAGGTTTTGGAAGTCCTAAATCAT 57.159 37.500 16.48 4.95 41.96 2.45
6299 6797 1.068588 CAGTTGTCCTCGTCCTGTGAA 59.931 52.381 0.00 0.00 0.00 3.18
6417 6915 3.386402 GGTATAGCCTCTGATCTATGCCC 59.614 52.174 16.30 9.98 40.17 5.36
6457 6955 5.867716 CCTACCTTTTCACGAATATATCCGG 59.132 44.000 0.00 0.00 0.00 5.14
6494 6992 8.074972 GCATGAGATATCCAAAAGTGAGATTTC 58.925 37.037 0.00 0.00 0.00 2.17
6497 6995 6.598503 TGCATGAGATATCCAAAAGTGAGAT 58.401 36.000 0.00 0.00 0.00 2.75
6524 7022 1.028330 ACACAGGAATGCCGCAGATG 61.028 55.000 0.00 0.00 39.96 2.90
6528 7026 1.228094 TGAACACAGGAATGCCGCA 60.228 52.632 0.00 0.00 39.96 5.69
6577 7075 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
6578 7076 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
6579 7077 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
6580 7078 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
6581 7079 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
6582 7080 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
6583 7081 7.335924 TGAAAGACAAATATTTAGGAACGGAGG 59.664 37.037 0.00 0.00 0.00 4.30
6584 7082 8.263940 TGAAAGACAAATATTTAGGAACGGAG 57.736 34.615 0.00 0.00 0.00 4.63
6585 7083 8.624367 TTGAAAGACAAATATTTAGGAACGGA 57.376 30.769 0.00 0.00 35.39 4.69
6586 7084 8.726988 TCTTGAAAGACAAATATTTAGGAACGG 58.273 33.333 0.00 0.00 38.08 4.44
6587 7085 9.760660 CTCTTGAAAGACAAATATTTAGGAACG 57.239 33.333 0.00 0.00 38.08 3.95
6598 7096 9.525409 CTTGTTGAAATCTCTTGAAAGACAAAT 57.475 29.630 0.00 0.00 38.08 2.32
6599 7097 8.522830 ACTTGTTGAAATCTCTTGAAAGACAAA 58.477 29.630 0.00 0.00 38.08 2.83
6600 7098 7.970061 CACTTGTTGAAATCTCTTGAAAGACAA 59.030 33.333 0.00 0.00 36.97 3.18
6601 7099 7.336679 TCACTTGTTGAAATCTCTTGAAAGACA 59.663 33.333 0.00 0.00 0.00 3.41
6602 7100 7.641802 GTCACTTGTTGAAATCTCTTGAAAGAC 59.358 37.037 0.00 0.00 35.39 3.01
6603 7101 7.554118 AGTCACTTGTTGAAATCTCTTGAAAGA 59.446 33.333 0.00 0.00 35.39 2.52
6604 7102 7.701445 AGTCACTTGTTGAAATCTCTTGAAAG 58.299 34.615 0.00 0.00 35.39 2.62
6605 7103 7.630242 AGTCACTTGTTGAAATCTCTTGAAA 57.370 32.000 0.00 0.00 35.39 2.69
6606 7104 7.768582 TGTAGTCACTTGTTGAAATCTCTTGAA 59.231 33.333 0.00 0.00 35.39 2.69
6607 7105 7.272244 TGTAGTCACTTGTTGAAATCTCTTGA 58.728 34.615 0.00 0.00 35.39 3.02
6608 7106 7.482654 TGTAGTCACTTGTTGAAATCTCTTG 57.517 36.000 0.00 0.00 35.39 3.02
6609 7107 9.209175 GTATGTAGTCACTTGTTGAAATCTCTT 57.791 33.333 0.00 0.00 35.39 2.85
6610 7108 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
6611 7109 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
6612 7110 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
6613 7111 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
6614 7112 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
6615 7113 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
6616 7114 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
6617 7115 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
6618 7116 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
6619 7117 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
6620 7118 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
6621 7119 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
6622 7120 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
6623 7121 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
6624 7122 4.630069 ACATTTTGCTCCGTATGTAGTCAC 59.370 41.667 0.00 0.00 29.93 3.67
6625 7123 4.629634 CACATTTTGCTCCGTATGTAGTCA 59.370 41.667 0.00 0.00 30.53 3.41
6626 7124 4.630069 ACACATTTTGCTCCGTATGTAGTC 59.370 41.667 0.00 0.00 30.53 2.59
6627 7125 4.391830 CACACATTTTGCTCCGTATGTAGT 59.608 41.667 0.00 0.00 30.53 2.73
6628 7126 4.629634 TCACACATTTTGCTCCGTATGTAG 59.370 41.667 0.00 0.00 30.53 2.74
6629 7127 4.570930 TCACACATTTTGCTCCGTATGTA 58.429 39.130 0.00 0.00 30.53 2.29
6630 7128 3.407698 TCACACATTTTGCTCCGTATGT 58.592 40.909 0.00 0.00 0.00 2.29
6631 7129 4.418013 TTCACACATTTTGCTCCGTATG 57.582 40.909 0.00 0.00 0.00 2.39
6632 7130 6.942532 ATATTCACACATTTTGCTCCGTAT 57.057 33.333 0.00 0.00 0.00 3.06
6633 7131 8.984764 GTATATATTCACACATTTTGCTCCGTA 58.015 33.333 0.00 0.00 0.00 4.02
6634 7132 6.942532 ATATATTCACACATTTTGCTCCGT 57.057 33.333 0.00 0.00 0.00 4.69
6635 7133 7.860613 TGTATATATTCACACATTTTGCTCCG 58.139 34.615 0.00 0.00 0.00 4.63
6636 7134 9.831737 GATGTATATATTCACACATTTTGCTCC 57.168 33.333 1.37 0.00 31.94 4.70
6637 7135 9.831737 GGATGTATATATTCACACATTTTGCTC 57.168 33.333 1.37 0.00 31.94 4.26
6638 7136 8.506437 CGGATGTATATATTCACACATTTTGCT 58.494 33.333 1.37 0.00 31.94 3.91
6639 7137 8.289618 ACGGATGTATATATTCACACATTTTGC 58.710 33.333 1.37 0.00 31.94 3.68
6644 7142 9.586435 CACATACGGATGTATATATTCACACAT 57.414 33.333 14.23 0.00 44.82 3.21
6645 7143 8.032451 CCACATACGGATGTATATATTCACACA 58.968 37.037 14.23 0.00 44.82 3.72
6646 7144 8.033038 ACCACATACGGATGTATATATTCACAC 58.967 37.037 14.23 0.00 44.82 3.82
6647 7145 8.129496 ACCACATACGGATGTATATATTCACA 57.871 34.615 14.23 0.00 44.82 3.58
6648 7146 9.731819 CTACCACATACGGATGTATATATTCAC 57.268 37.037 14.23 0.00 44.82 3.18
6649 7147 9.470399 ACTACCACATACGGATGTATATATTCA 57.530 33.333 14.23 0.00 44.82 2.57
6650 7148 9.947669 GACTACCACATACGGATGTATATATTC 57.052 37.037 14.23 6.36 44.82 1.75
6651 7149 8.910944 GGACTACCACATACGGATGTATATATT 58.089 37.037 14.23 0.53 44.82 1.28
6652 7150 8.057011 TGGACTACCACATACGGATGTATATAT 58.943 37.037 14.23 0.00 44.82 0.86
6653 7151 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
6654 7152 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
6655 7153 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
6656 7154 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
6657 7155 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
6692 7190 9.350951 CCCTCGGTTCCTAAATATTTATCTTTT 57.649 33.333 8.34 0.00 0.00 2.27
6693 7191 8.720537 TCCCTCGGTTCCTAAATATTTATCTTT 58.279 33.333 8.34 0.00 0.00 2.52
6694 7192 8.271398 TCCCTCGGTTCCTAAATATTTATCTT 57.729 34.615 8.34 0.00 0.00 2.40
6695 7193 7.513091 ACTCCCTCGGTTCCTAAATATTTATCT 59.487 37.037 8.34 0.00 0.00 1.98
6696 7194 7.677892 ACTCCCTCGGTTCCTAAATATTTATC 58.322 38.462 8.34 1.20 0.00 1.75
6697 7195 7.628501 ACTCCCTCGGTTCCTAAATATTTAT 57.371 36.000 8.34 0.00 0.00 1.40
6698 7196 8.731591 ATACTCCCTCGGTTCCTAAATATTTA 57.268 34.615 7.66 7.66 0.00 1.40
6699 7197 5.970501 ACTCCCTCGGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
6700 7198 8.759782 CATATACTCCCTCGGTTCCTAAATATT 58.240 37.037 0.00 0.00 0.00 1.28
6701 7199 7.344871 CCATATACTCCCTCGGTTCCTAAATAT 59.655 40.741 0.00 0.00 0.00 1.28
6702 7200 6.666546 CCATATACTCCCTCGGTTCCTAAATA 59.333 42.308 0.00 0.00 0.00 1.40
6703 7201 5.484290 CCATATACTCCCTCGGTTCCTAAAT 59.516 44.000 0.00 0.00 0.00 1.40
6704 7202 4.836736 CCATATACTCCCTCGGTTCCTAAA 59.163 45.833 0.00 0.00 0.00 1.85
6705 7203 4.413760 CCATATACTCCCTCGGTTCCTAA 58.586 47.826 0.00 0.00 0.00 2.69
6706 7204 3.816842 GCCATATACTCCCTCGGTTCCTA 60.817 52.174 0.00 0.00 0.00 2.94
6707 7205 2.890814 CCATATACTCCCTCGGTTCCT 58.109 52.381 0.00 0.00 0.00 3.36
6708 7206 1.275573 GCCATATACTCCCTCGGTTCC 59.724 57.143 0.00 0.00 0.00 3.62
6709 7207 2.249139 AGCCATATACTCCCTCGGTTC 58.751 52.381 0.00 0.00 0.00 3.62
6710 7208 2.400467 AGCCATATACTCCCTCGGTT 57.600 50.000 0.00 0.00 0.00 4.44
6711 7209 2.884720 GCTAGCCATATACTCCCTCGGT 60.885 54.545 2.29 0.00 0.00 4.69
6712 7210 1.751924 GCTAGCCATATACTCCCTCGG 59.248 57.143 2.29 0.00 0.00 4.63
6713 7211 2.729194 AGCTAGCCATATACTCCCTCG 58.271 52.381 12.13 0.00 0.00 4.63
6714 7212 4.862371 AGTAGCTAGCCATATACTCCCTC 58.138 47.826 12.13 0.00 0.00 4.30
6715 7213 4.957606 AGTAGCTAGCCATATACTCCCT 57.042 45.455 12.13 0.00 0.00 4.20
6716 7214 7.945664 ACATATAGTAGCTAGCCATATACTCCC 59.054 40.741 15.43 0.00 31.25 4.30
6717 7215 8.927675 ACATATAGTAGCTAGCCATATACTCC 57.072 38.462 15.43 0.00 31.25 3.85
6721 7219 9.794719 CCAGTACATATAGTAGCTAGCCATATA 57.205 37.037 12.13 11.70 32.19 0.86
6722 7220 7.231722 GCCAGTACATATAGTAGCTAGCCATAT 59.768 40.741 12.13 9.85 32.19 1.78
6723 7221 6.546403 GCCAGTACATATAGTAGCTAGCCATA 59.454 42.308 12.13 4.83 32.19 2.74
6724 7222 5.361285 GCCAGTACATATAGTAGCTAGCCAT 59.639 44.000 12.13 2.55 32.19 4.40
6725 7223 4.705507 GCCAGTACATATAGTAGCTAGCCA 59.294 45.833 12.13 0.00 32.19 4.75
6726 7224 4.951094 AGCCAGTACATATAGTAGCTAGCC 59.049 45.833 12.13 0.00 32.02 3.93
6727 7225 6.518208 AAGCCAGTACATATAGTAGCTAGC 57.482 41.667 6.62 6.62 32.45 3.42
6728 7226 7.329717 GCAAAAGCCAGTACATATAGTAGCTAG 59.670 40.741 0.00 0.00 32.45 3.42
6729 7227 7.152645 GCAAAAGCCAGTACATATAGTAGCTA 58.847 38.462 0.00 0.00 32.45 3.32
6730 7228 5.992217 GCAAAAGCCAGTACATATAGTAGCT 59.008 40.000 0.00 0.00 34.35 3.32
6731 7229 5.179555 GGCAAAAGCCAGTACATATAGTAGC 59.820 44.000 0.84 0.00 32.19 3.58
6732 7230 6.525629 AGGCAAAAGCCAGTACATATAGTAG 58.474 40.000 9.42 0.00 32.19 2.57
6733 7231 6.494666 AGGCAAAAGCCAGTACATATAGTA 57.505 37.500 9.42 0.00 0.00 1.82
6734 7232 5.373812 AGGCAAAAGCCAGTACATATAGT 57.626 39.130 9.42 0.00 0.00 2.12
6776 7274 5.071788 AGAGGACAATAACAGAACAACCAGA 59.928 40.000 0.00 0.00 0.00 3.86
6782 7280 6.928348 TCCTAAGAGGACAATAACAGAACA 57.072 37.500 0.00 0.00 40.06 3.18
7010 7509 2.490115 CGTGGCCTGGTTGCTTTTAATA 59.510 45.455 3.32 0.00 0.00 0.98
7035 7534 3.007473 AGGGACAAAACTTCGTTTGGA 57.993 42.857 1.15 0.00 41.82 3.53
7093 7592 5.701290 CCCAATGACCGACTTATCCTTATTC 59.299 44.000 0.00 0.00 0.00 1.75
7095 7594 4.905456 TCCCAATGACCGACTTATCCTTAT 59.095 41.667 0.00 0.00 0.00 1.73
7096 7595 4.291792 TCCCAATGACCGACTTATCCTTA 58.708 43.478 0.00 0.00 0.00 2.69
7097 7596 3.112263 TCCCAATGACCGACTTATCCTT 58.888 45.455 0.00 0.00 0.00 3.36
7098 7597 2.759355 TCCCAATGACCGACTTATCCT 58.241 47.619 0.00 0.00 0.00 3.24
7099 7598 3.553828 TTCCCAATGACCGACTTATCC 57.446 47.619 0.00 0.00 0.00 2.59
7100 7599 4.275936 CCAATTCCCAATGACCGACTTATC 59.724 45.833 0.00 0.00 0.00 1.75
7208 7713 1.470098 GTGTGCCTTGCTTCATAGTGG 59.530 52.381 0.00 0.00 0.00 4.00
7214 7719 0.391228 TACGAGTGTGCCTTGCTTCA 59.609 50.000 0.00 0.00 0.00 3.02
7294 7799 1.005037 GGTCGTGCACACTCCATGA 60.005 57.895 18.64 0.45 0.00 3.07
7431 7936 7.956328 TTAATGTCTCAGAGGCTAGTCTTAA 57.044 36.000 0.00 0.00 0.00 1.85
7432 7937 7.956328 TTTAATGTCTCAGAGGCTAGTCTTA 57.044 36.000 0.00 0.00 0.00 2.10
7449 7954 5.659463 TGTGCTGCTTTGAAGTTTTAATGT 58.341 33.333 0.00 0.00 0.00 2.71
7481 7986 4.202020 GGCAAGTTCTTTTTCGAGAAACCT 60.202 41.667 0.00 0.00 37.40 3.50
7549 8054 5.521735 GGTACATGCTTTGTATCTCTCACAG 59.478 44.000 0.00 0.00 42.63 3.66
7570 8075 1.302383 CGCAACTTGGCCATTCGGTA 61.302 55.000 6.09 0.00 33.28 4.02
7680 8185 3.199727 TGGTTATTCCAGCTGCTATCACA 59.800 43.478 8.66 0.00 41.93 3.58
7723 8228 0.531200 GACGGAGGGGTGACAAGTAG 59.469 60.000 0.00 0.00 0.00 2.57
7756 8261 4.760715 CCAAGGCTCCAGATTGAGAATATG 59.239 45.833 0.00 0.00 34.11 1.78
7924 8429 3.826157 CCTTTGATGTTACCTGCTTTGGA 59.174 43.478 0.00 0.00 0.00 3.53
7995 8502 5.821470 ACATCATTCTTAGATGCTTGACCTG 59.179 40.000 0.00 0.00 45.19 4.00
8086 8682 5.792468 GCTAAGATAAATAAGCATGCGAAGC 59.208 40.000 13.01 4.22 44.31 3.86
8108 8704 2.089980 GTCAATGGACTGAATGCAGCT 58.910 47.619 0.00 0.00 46.26 4.24
8109 8705 1.133790 GGTCAATGGACTGAATGCAGC 59.866 52.381 0.00 0.00 46.26 5.25
8223 8825 1.700042 GGGTCCTAGCATGGAGTGGG 61.700 65.000 0.00 0.00 36.69 4.61
8345 8949 7.650903 GGTGTCGATATAACTTTACAAGGTAGG 59.349 40.741 0.00 0.00 33.45 3.18
8418 9022 8.989131 TGTATAGTTAGTCCTTGCTCCTAAAAT 58.011 33.333 0.00 0.00 0.00 1.82
8715 9327 4.262851 GCCAACCACACCCTTTTTCATAAT 60.263 41.667 0.00 0.00 0.00 1.28
8736 9348 0.179169 GTCTCGGTCGACTTAGTGCC 60.179 60.000 16.46 0.00 0.00 5.01
8738 9350 3.181512 GGTTAGTCTCGGTCGACTTAGTG 60.182 52.174 16.46 8.46 41.27 2.74
8742 9354 1.901591 TGGTTAGTCTCGGTCGACTT 58.098 50.000 16.46 0.00 41.27 3.01
8833 9449 7.439056 CAGCCAACAAAAGACTTGATTATGTTT 59.561 33.333 0.00 0.00 0.00 2.83
8836 9452 6.680810 TCAGCCAACAAAAGACTTGATTATG 58.319 36.000 0.00 0.00 0.00 1.90
8841 9457 5.596836 ATTTCAGCCAACAAAAGACTTGA 57.403 34.783 0.00 0.00 0.00 3.02
8954 9667 4.728882 GCAACAGTTGAGACACAGAGTTTG 60.729 45.833 17.99 0.00 0.00 2.93
8962 9675 3.194861 TGTGTAGCAACAGTTGAGACAC 58.805 45.455 28.13 28.13 42.90 3.67
8984 9697 6.324254 AGTTAAGACACAGAGTTTGGAGTACT 59.676 38.462 0.00 0.00 0.00 2.73
8985 9698 6.514063 AGTTAAGACACAGAGTTTGGAGTAC 58.486 40.000 0.00 0.00 0.00 2.73
8986 9699 6.726490 AGTTAAGACACAGAGTTTGGAGTA 57.274 37.500 0.00 0.00 0.00 2.59
8987 9700 5.615925 AGTTAAGACACAGAGTTTGGAGT 57.384 39.130 0.00 0.00 0.00 3.85
8988 9701 8.608844 AAATAGTTAAGACACAGAGTTTGGAG 57.391 34.615 0.00 0.00 0.00 3.86
8994 9707 8.989980 GCAACTTAAATAGTTAAGACACAGAGT 58.010 33.333 25.07 2.32 46.28 3.24
8995 9708 9.209175 AGCAACTTAAATAGTTAAGACACAGAG 57.791 33.333 25.07 10.00 46.28 3.35
9007 9720 9.121658 GCCCTTAGAAATAGCAACTTAAATAGT 57.878 33.333 0.00 0.00 39.32 2.12
9020 9733 4.843728 TGGAGTTGTGCCCTTAGAAATAG 58.156 43.478 0.00 0.00 0.00 1.73
9045 9780 0.527565 GAGGCATTTTGACGCATGGT 59.472 50.000 0.00 0.00 0.00 3.55
9053 9788 7.982761 AATTTAAGCATTTGAGGCATTTTGA 57.017 28.000 0.00 0.00 0.00 2.69
9066 9801 6.128035 TGTCGACACTGCATAATTTAAGCATT 60.128 34.615 15.76 0.00 37.68 3.56
9068 9803 4.693095 TGTCGACACTGCATAATTTAAGCA 59.307 37.500 15.76 6.21 36.72 3.91
9069 9804 5.022021 GTGTCGACACTGCATAATTTAAGC 58.978 41.667 35.51 8.51 43.25 3.09
9070 9805 5.351465 AGGTGTCGACACTGCATAATTTAAG 59.649 40.000 39.01 0.00 45.73 1.85
9071 9806 5.242434 AGGTGTCGACACTGCATAATTTAA 58.758 37.500 39.01 3.50 45.73 1.52
9072 9807 4.827692 AGGTGTCGACACTGCATAATTTA 58.172 39.130 39.01 3.96 45.73 1.40
9073 9808 3.674997 AGGTGTCGACACTGCATAATTT 58.325 40.909 39.01 16.35 45.73 1.82
9074 9809 3.334583 AGGTGTCGACACTGCATAATT 57.665 42.857 39.01 17.21 45.73 1.40
9075 9810 3.334583 AAGGTGTCGACACTGCATAAT 57.665 42.857 39.01 19.46 45.73 1.28
9076 9811 2.831685 AAGGTGTCGACACTGCATAA 57.168 45.000 39.01 6.25 45.73 1.90
9077 9812 2.805671 CAAAAGGTGTCGACACTGCATA 59.194 45.455 39.01 7.03 45.73 3.14
9109 9844 0.603707 AGTGGACAGTTGATGCACGG 60.604 55.000 0.00 0.00 29.93 4.94
9111 9846 4.216257 ACATTTAGTGGACAGTTGATGCAC 59.784 41.667 0.00 0.00 0.00 4.57
9116 9851 3.659786 CGGACATTTAGTGGACAGTTGA 58.340 45.455 0.00 0.00 0.00 3.18
9117 9852 2.159627 GCGGACATTTAGTGGACAGTTG 59.840 50.000 0.00 0.00 0.00 3.16
9118 9853 2.224426 TGCGGACATTTAGTGGACAGTT 60.224 45.455 0.00 0.00 0.00 3.16
9119 9854 1.346395 TGCGGACATTTAGTGGACAGT 59.654 47.619 0.00 0.00 0.00 3.55
9120 9855 2.093306 TGCGGACATTTAGTGGACAG 57.907 50.000 0.00 0.00 0.00 3.51
9121 9856 2.550606 GTTTGCGGACATTTAGTGGACA 59.449 45.455 0.00 0.00 0.00 4.02
9122 9857 2.412325 CGTTTGCGGACATTTAGTGGAC 60.412 50.000 0.00 0.00 0.00 4.02
9127 9862 3.879427 TCAAACGTTTGCGGACATTTAG 58.121 40.909 31.42 8.03 43.45 1.85
9135 9870 0.872451 GGGGTTTCAAACGTTTGCGG 60.872 55.000 31.42 12.74 43.45 5.69
9191 9926 3.691118 CACCAACATGATGTAGAACCAGG 59.309 47.826 0.00 0.00 0.00 4.45
9196 9931 4.688879 GTCGAACACCAACATGATGTAGAA 59.311 41.667 0.00 0.00 0.00 2.10
9197 9932 4.242475 GTCGAACACCAACATGATGTAGA 58.758 43.478 0.00 0.00 0.00 2.59
9198 9933 3.993736 TGTCGAACACCAACATGATGTAG 59.006 43.478 0.00 0.00 0.00 2.74
9199 9934 3.996480 TGTCGAACACCAACATGATGTA 58.004 40.909 0.00 0.00 0.00 2.29
9200 9935 2.844946 TGTCGAACACCAACATGATGT 58.155 42.857 0.00 0.00 0.00 3.06
9201 9936 3.894782 TTGTCGAACACCAACATGATG 57.105 42.857 0.00 0.00 0.00 3.07
9202 9937 5.123820 CCTAATTGTCGAACACCAACATGAT 59.876 40.000 0.00 0.00 0.00 2.45
9209 9944 2.289819 GGGTCCTAATTGTCGAACACCA 60.290 50.000 0.00 0.00 0.00 4.17
9212 9947 1.619827 ACGGGTCCTAATTGTCGAACA 59.380 47.619 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.