Multiple sequence alignment - TraesCS4B01G168300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G168300 chr4B 100.000 5579 0 0 1 5579 368109244 368103666 0.000000e+00 10303
1 TraesCS4B01G168300 chr4B 95.238 84 2 2 2807 2889 368106387 368106305 1.260000e-26 132
2 TraesCS4B01G168300 chr4B 95.238 84 2 2 2858 2940 368106438 368106356 1.260000e-26 132
3 TraesCS4B01G168300 chr4A 97.042 2096 45 9 2886 4970 191040557 191042646 0.000000e+00 3511
4 TraesCS4B01G168300 chr4A 93.920 2023 81 18 884 2889 191038614 191040611 0.000000e+00 3016
5 TraesCS4B01G168300 chr4A 92.857 434 28 3 1 432 191036862 191037294 1.320000e-175 627
6 TraesCS4B01G168300 chr4A 94.133 375 18 3 4969 5339 191043871 191044245 8.110000e-158 568
7 TraesCS4B01G168300 chr4A 92.377 223 17 0 5357 5579 191103515 191103737 9.020000e-83 318
8 TraesCS4B01G168300 chr4A 88.889 108 12 0 429 536 191037600 191037707 3.510000e-27 134
9 TraesCS4B01G168300 chr4D 91.610 2050 87 44 884 2889 297310253 297308245 0.000000e+00 2754
10 TraesCS4B01G168300 chr4D 93.434 1660 61 18 3499 5141 297303001 297301373 0.000000e+00 2418
11 TraesCS4B01G168300 chr4D 91.743 545 40 5 1 542 297319893 297319351 0.000000e+00 752
12 TraesCS4B01G168300 chr4D 98.769 325 4 0 3179 3503 297308206 297307882 3.750000e-161 579
13 TraesCS4B01G168300 chr4D 88.163 245 24 5 2954 3194 315080506 315080263 2.540000e-73 287
14 TraesCS4B01G168300 chr4D 86.628 172 10 7 565 736 297310443 297310285 1.600000e-40 178
15 TraesCS4B01G168300 chr4D 94.505 91 4 1 2886 2975 297308299 297308209 7.540000e-29 139
16 TraesCS4B01G168300 chr6A 88.976 254 22 6 2955 3204 588601127 588600876 5.430000e-80 309
17 TraesCS4B01G168300 chr6D 91.150 226 15 3 2972 3193 440639720 440639496 9.080000e-78 302
18 TraesCS4B01G168300 chr2D 88.525 244 23 5 2953 3193 645896532 645896773 1.970000e-74 291
19 TraesCS4B01G168300 chr5B 88.333 240 24 2 2955 3191 436164911 436165149 9.150000e-73 285
20 TraesCS4B01G168300 chr1D 88.066 243 25 4 2954 3193 12232122 12232363 9.150000e-73 285
21 TraesCS4B01G168300 chr1A 88.066 243 25 4 2954 3193 14115610 14115851 9.150000e-73 285
22 TraesCS4B01G168300 chr1A 100.000 125 0 0 735 859 56914600 56914476 1.210000e-56 231
23 TraesCS4B01G168300 chr1A 98.374 123 2 0 737 859 64852533 64852411 3.380000e-52 217
24 TraesCS4B01G168300 chr2A 88.115 244 22 7 2954 3194 358941213 358941452 3.290000e-72 283
25 TraesCS4B01G168300 chr3B 99.200 125 1 0 737 861 654654335 654654211 5.620000e-55 226
26 TraesCS4B01G168300 chr3B 87.895 190 22 1 5370 5559 504960309 504960121 7.270000e-54 222
27 TraesCS4B01G168300 chr7A 99.194 124 1 0 737 860 717823098 717822975 2.020000e-54 224
28 TraesCS4B01G168300 chr2B 99.194 124 1 0 737 860 103257519 103257396 2.020000e-54 224
29 TraesCS4B01G168300 chr2B 99.194 124 1 0 737 860 437818999 437818876 2.020000e-54 224
30 TraesCS4B01G168300 chr1B 99.187 123 1 0 737 859 299981706 299981584 7.270000e-54 222
31 TraesCS4B01G168300 chr5D 98.400 125 2 0 736 860 312371290 312371414 2.620000e-53 220
32 TraesCS4B01G168300 chr3A 98.387 124 2 0 737 860 580595604 580595481 9.410000e-53 219


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G168300 chr4B 368103666 368109244 5578 True 3522.333333 10303 96.825333 1 5579 3 chr4B.!!$R1 5578
1 TraesCS4B01G168300 chr4A 191036862 191044245 7383 False 1571.200000 3511 93.368200 1 5339 5 chr4A.!!$F2 5338
2 TraesCS4B01G168300 chr4D 297301373 297303001 1628 True 2418.000000 2418 93.434000 3499 5141 1 chr4D.!!$R1 1642
3 TraesCS4B01G168300 chr4D 297307882 297310443 2561 True 912.500000 2754 92.878000 565 3503 4 chr4D.!!$R4 2938
4 TraesCS4B01G168300 chr4D 297319351 297319893 542 True 752.000000 752 91.743000 1 542 1 chr4D.!!$R2 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
620 1229 0.030369 ACGAAGACACACGGACTGTC 59.970 55.0 0.00 0.0 38.7 3.51 F
854 1853 0.099082 CCGTACGTCAGAGGAGCTTC 59.901 60.0 15.21 0.0 0.0 3.86 F
2409 3455 0.107945 ATTTGCTGCGAGGAGAGGTC 60.108 55.0 0.00 0.0 0.0 3.85 F
2830 3876 0.036732 GTGTCACCTTCTCCATGGCA 59.963 55.0 6.96 0.0 0.0 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1822 2867 0.100325 CAGCCTAGCTCACTGTCTCG 59.900 60.0 0.00 0.0 36.40 4.04 R
2811 3857 0.036732 TGCCATGGAGAAGGTGACAC 59.963 55.0 18.40 0.0 0.00 3.67 R
4134 5193 0.471591 AAATTTGGACAGCCTGGGCA 60.472 50.0 14.39 0.0 44.88 5.36 R
4646 5705 2.336945 TGTGGCTTCCTGCATCTATG 57.663 50.0 0.00 0.0 45.15 2.23 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
183 185 7.497909 ACCATATGAAAATAGTTGGGTCTTACG 59.502 37.037 3.65 0.00 0.00 3.18
213 215 9.621629 ACCGAACCATAGATTTATTTCATACAA 57.378 29.630 0.00 0.00 0.00 2.41
273 276 3.510360 AGTACTAACTGAACGCCATGACT 59.490 43.478 0.00 0.00 33.57 3.41
591 1200 5.065914 AGATCCAAATATGTTCATCCACCG 58.934 41.667 0.00 0.00 0.00 4.94
595 1204 4.397730 CCAAATATGTTCATCCACCGTTCA 59.602 41.667 0.00 0.00 0.00 3.18
597 1206 6.405731 CCAAATATGTTCATCCACCGTTCAAT 60.406 38.462 0.00 0.00 0.00 2.57
615 1224 1.159285 ATCGTACGAAGACACACGGA 58.841 50.000 23.56 0.00 35.21 4.69
616 1225 0.235665 TCGTACGAAGACACACGGAC 59.764 55.000 17.11 0.00 39.58 4.79
618 1227 1.682982 GTACGAAGACACACGGACTG 58.317 55.000 0.00 0.00 39.80 3.51
620 1229 0.030369 ACGAAGACACACGGACTGTC 59.970 55.000 0.00 0.00 38.70 3.51
698 1697 4.250464 CAAAAATAGCACCGACTGGACTA 58.750 43.478 0.00 0.00 39.21 2.59
732 1731 1.069358 GGAGATCCGAGACACCAATCC 59.931 57.143 0.00 0.00 0.00 3.01
733 1732 1.069358 GAGATCCGAGACACCAATCCC 59.931 57.143 0.00 0.00 0.00 3.85
734 1733 0.830648 GATCCGAGACACCAATCCCA 59.169 55.000 0.00 0.00 0.00 4.37
735 1734 0.833287 ATCCGAGACACCAATCCCAG 59.167 55.000 0.00 0.00 0.00 4.45
736 1735 1.221840 CCGAGACACCAATCCCAGG 59.778 63.158 0.00 0.00 0.00 4.45
737 1736 1.221840 CGAGACACCAATCCCAGGG 59.778 63.158 0.00 0.00 0.00 4.45
738 1737 1.264749 CGAGACACCAATCCCAGGGA 61.265 60.000 11.90 11.90 35.55 4.20
739 1738 0.253327 GAGACACCAATCCCAGGGAC 59.747 60.000 11.70 0.00 32.98 4.46
740 1739 1.078426 GACACCAATCCCAGGGACG 60.078 63.158 11.70 4.86 32.98 4.79
741 1740 1.537889 ACACCAATCCCAGGGACGA 60.538 57.895 11.70 0.00 32.98 4.20
742 1741 1.221840 CACCAATCCCAGGGACGAG 59.778 63.158 11.70 4.47 32.98 4.18
743 1742 1.995626 ACCAATCCCAGGGACGAGG 60.996 63.158 11.70 15.50 32.98 4.63
744 1743 1.689233 CCAATCCCAGGGACGAGGA 60.689 63.158 11.70 0.00 38.67 3.71
745 1744 1.056700 CCAATCCCAGGGACGAGGAT 61.057 60.000 11.70 0.00 44.88 3.24
746 1745 0.394565 CAATCCCAGGGACGAGGATC 59.605 60.000 11.70 0.00 42.77 3.36
747 1746 0.764752 AATCCCAGGGACGAGGATCC 60.765 60.000 11.70 2.48 42.77 3.36
753 1752 3.551407 GGACGAGGATCCCCTGCC 61.551 72.222 8.55 1.52 44.53 4.85
754 1753 3.917760 GACGAGGATCCCCTGCCG 61.918 72.222 8.55 7.30 44.53 5.69
755 1754 4.779733 ACGAGGATCCCCTGCCGT 62.780 66.667 8.55 7.95 44.53 5.68
756 1755 4.227134 CGAGGATCCCCTGCCGTG 62.227 72.222 8.55 0.00 44.53 4.94
757 1756 4.554036 GAGGATCCCCTGCCGTGC 62.554 72.222 8.55 0.00 44.53 5.34
783 1782 4.719369 GCCGTTCCGTCGCTGACT 62.719 66.667 7.03 0.00 0.00 3.41
784 1783 2.504244 CCGTTCCGTCGCTGACTC 60.504 66.667 7.03 0.00 0.00 3.36
785 1784 2.254350 CGTTCCGTCGCTGACTCA 59.746 61.111 7.03 0.00 0.00 3.41
786 1785 1.154016 CGTTCCGTCGCTGACTCAT 60.154 57.895 7.03 0.00 0.00 2.90
787 1786 1.406219 CGTTCCGTCGCTGACTCATG 61.406 60.000 7.03 0.00 0.00 3.07
788 1787 1.078759 GTTCCGTCGCTGACTCATGG 61.079 60.000 0.00 2.01 0.00 3.66
789 1788 2.202797 CCGTCGCTGACTCATGGG 60.203 66.667 0.00 0.00 0.00 4.00
790 1789 2.887568 CGTCGCTGACTCATGGGC 60.888 66.667 0.00 0.00 0.00 5.36
791 1790 2.512515 GTCGCTGACTCATGGGCC 60.513 66.667 0.00 0.00 0.00 5.80
792 1791 3.785859 TCGCTGACTCATGGGCCC 61.786 66.667 17.59 17.59 0.00 5.80
794 1793 3.785859 GCTGACTCATGGGCCCGA 61.786 66.667 19.37 8.43 0.00 5.14
795 1794 2.187946 CTGACTCATGGGCCCGAC 59.812 66.667 19.37 3.37 0.00 4.79
796 1795 2.284625 TGACTCATGGGCCCGACT 60.285 61.111 19.37 0.33 0.00 4.18
797 1796 2.187946 GACTCATGGGCCCGACTG 59.812 66.667 19.37 14.85 0.00 3.51
798 1797 2.284625 ACTCATGGGCCCGACTGA 60.285 61.111 19.37 18.36 0.00 3.41
799 1798 1.899437 GACTCATGGGCCCGACTGAA 61.899 60.000 19.37 0.00 0.00 3.02
800 1799 1.299648 CTCATGGGCCCGACTGAAA 59.700 57.895 19.37 0.00 0.00 2.69
801 1800 1.002624 TCATGGGCCCGACTGAAAC 60.003 57.895 19.37 0.00 0.00 2.78
802 1801 1.002134 CATGGGCCCGACTGAAACT 60.002 57.895 19.37 0.00 0.00 2.66
803 1802 0.609131 CATGGGCCCGACTGAAACTT 60.609 55.000 19.37 0.00 0.00 2.66
804 1803 0.609131 ATGGGCCCGACTGAAACTTG 60.609 55.000 19.37 0.00 0.00 3.16
805 1804 1.072505 GGGCCCGACTGAAACTTGA 59.927 57.895 5.69 0.00 0.00 3.02
806 1805 1.235281 GGGCCCGACTGAAACTTGAC 61.235 60.000 5.69 0.00 0.00 3.18
807 1806 1.235281 GGCCCGACTGAAACTTGACC 61.235 60.000 0.00 0.00 0.00 4.02
808 1807 1.235281 GCCCGACTGAAACTTGACCC 61.235 60.000 0.00 0.00 0.00 4.46
809 1808 0.107831 CCCGACTGAAACTTGACCCA 59.892 55.000 0.00 0.00 0.00 4.51
810 1809 1.226746 CCGACTGAAACTTGACCCAC 58.773 55.000 0.00 0.00 0.00 4.61
811 1810 1.226746 CGACTGAAACTTGACCCACC 58.773 55.000 0.00 0.00 0.00 4.61
812 1811 1.202651 CGACTGAAACTTGACCCACCT 60.203 52.381 0.00 0.00 0.00 4.00
813 1812 2.222027 GACTGAAACTTGACCCACCTG 58.778 52.381 0.00 0.00 0.00 4.00
814 1813 1.564348 ACTGAAACTTGACCCACCTGT 59.436 47.619 0.00 0.00 0.00 4.00
815 1814 2.222027 CTGAAACTTGACCCACCTGTC 58.778 52.381 0.00 0.00 35.77 3.51
816 1815 1.562008 TGAAACTTGACCCACCTGTCA 59.438 47.619 0.00 0.00 43.26 3.58
817 1816 2.222027 GAAACTTGACCCACCTGTCAG 58.778 52.381 0.00 0.00 45.37 3.51
818 1817 1.213296 AACTTGACCCACCTGTCAGT 58.787 50.000 0.00 0.00 45.37 3.41
819 1818 0.469917 ACTTGACCCACCTGTCAGTG 59.530 55.000 0.00 0.00 45.37 3.66
826 1825 3.233355 CACCTGTCAGTGGCCTAAC 57.767 57.895 3.32 0.00 33.95 2.34
827 1826 0.670546 CACCTGTCAGTGGCCTAACG 60.671 60.000 3.32 0.00 33.95 3.18
828 1827 1.079127 CCTGTCAGTGGCCTAACGG 60.079 63.158 3.32 1.71 0.00 4.44
849 1848 3.807538 GCGCCGTACGTCAGAGGA 61.808 66.667 15.21 0.00 46.11 3.71
850 1849 2.403987 CGCCGTACGTCAGAGGAG 59.596 66.667 15.21 0.00 36.87 3.69
851 1850 2.102553 GCCGTACGTCAGAGGAGC 59.897 66.667 15.21 3.74 0.00 4.70
852 1851 2.408241 GCCGTACGTCAGAGGAGCT 61.408 63.158 15.21 0.00 0.00 4.09
853 1852 1.935327 GCCGTACGTCAGAGGAGCTT 61.935 60.000 15.21 0.00 0.00 3.74
854 1853 0.099082 CCGTACGTCAGAGGAGCTTC 59.901 60.000 15.21 0.00 0.00 3.86
855 1854 0.099082 CGTACGTCAGAGGAGCTTCC 59.901 60.000 7.22 0.00 36.58 3.46
917 1932 2.847327 ATCCCGATTTCTCATCGCAT 57.153 45.000 0.00 0.00 39.95 4.73
921 1936 1.541015 CCGATTTCTCATCGCATCCCA 60.541 52.381 0.00 0.00 39.95 4.37
922 1937 2.420642 CGATTTCTCATCGCATCCCAT 58.579 47.619 0.00 0.00 34.66 4.00
976 1992 2.342648 GTCGTCGCCTTCCCACTT 59.657 61.111 0.00 0.00 0.00 3.16
1185 2201 6.828785 AGATTTTTATGGGAGATGTAAGCGTT 59.171 34.615 0.00 0.00 0.00 4.84
1188 2204 6.913873 TTTATGGGAGATGTAAGCGTTTAC 57.086 37.500 14.50 14.50 39.69 2.01
1194 2210 2.997986 AGATGTAAGCGTTTACGGGTTG 59.002 45.455 16.00 0.00 41.68 3.77
1201 2217 2.619646 AGCGTTTACGGGTTGTTTTGAT 59.380 40.909 4.29 0.00 40.23 2.57
1478 2495 9.921637 CAGTTAGAGAAAGAGAGTCAATAACTT 57.078 33.333 0.00 0.00 38.74 2.66
1507 2524 4.320202 GCAACTGGACAGAGCGAATTTAAA 60.320 41.667 6.29 0.00 0.00 1.52
1534 2551 9.616156 TTACTTGAAGTTGTTATGGTTTCAGTA 57.384 29.630 1.97 0.00 0.00 2.74
1561 2578 7.804843 AATTGAGCCTGAGAAATTCATAGAG 57.195 36.000 0.00 0.00 34.68 2.43
1565 2582 5.852827 AGCCTGAGAAATTCATAGAGCTAC 58.147 41.667 0.00 0.00 34.68 3.58
1659 2676 6.285329 ACTAGGTAAGGTAACCATAGGCTA 57.715 41.667 0.00 0.00 42.40 3.93
1730 2751 6.310941 TCCTATTTTCAAATCCACCAGAACA 58.689 36.000 0.00 0.00 0.00 3.18
1800 2821 6.785191 ACAGCAGAATATATTTTGTTGGACG 58.215 36.000 26.02 10.30 37.40 4.79
1867 2912 9.132521 GTTTCTTGTTTGAATAATGACTGATGG 57.867 33.333 0.00 0.00 0.00 3.51
1898 2943 4.215399 TCGTTGGGCTATTTTTCTTCTGTG 59.785 41.667 0.00 0.00 0.00 3.66
1929 2974 4.172020 AGAGAGCCCTTCTTTCCTTAACT 58.828 43.478 0.00 0.00 35.87 2.24
1935 2980 4.341235 GCCCTTCTTTCCTTAACTTGTTGT 59.659 41.667 0.00 0.00 0.00 3.32
2098 3143 1.710809 ACTTGGGCCCTTTCTGTATGT 59.289 47.619 25.70 6.01 0.00 2.29
2139 3184 2.878406 TGCAAGTCTCAAAGGCTTACAC 59.122 45.455 0.00 0.00 38.24 2.90
2174 3219 5.823209 TGCCAGTATCTGATGTTCAATTG 57.177 39.130 0.00 0.00 32.44 2.32
2409 3455 0.107945 ATTTGCTGCGAGGAGAGGTC 60.108 55.000 0.00 0.00 0.00 3.85
2421 3467 5.127491 CGAGGAGAGGTCAGTATACTCTTT 58.873 45.833 1.26 0.00 41.38 2.52
2424 3470 7.215743 AGGAGAGGTCAGTATACTCTTTAGT 57.784 40.000 1.26 0.00 41.38 2.24
2520 3566 6.548441 TTTTACACTTTTATGGTCCGTCTG 57.452 37.500 0.00 0.00 0.00 3.51
2629 3675 4.564782 TGGAGCTTTTCAGAGTCATGAT 57.435 40.909 0.00 0.00 0.00 2.45
2722 3768 3.101437 TGGATTTCATGGCTTCATTGCT 58.899 40.909 0.00 0.00 0.00 3.91
2802 3848 0.321564 TTGGTCAGCCTCAATCCGTG 60.322 55.000 0.00 0.00 35.27 4.94
2803 3849 2.109126 GGTCAGCCTCAATCCGTGC 61.109 63.158 0.00 0.00 0.00 5.34
2804 3850 2.109126 GTCAGCCTCAATCCGTGCC 61.109 63.158 0.00 0.00 0.00 5.01
2805 3851 2.046023 CAGCCTCAATCCGTGCCA 60.046 61.111 0.00 0.00 0.00 4.92
2807 3853 1.033746 CAGCCTCAATCCGTGCCAAT 61.034 55.000 0.00 0.00 0.00 3.16
2808 3854 0.546122 AGCCTCAATCCGTGCCAATA 59.454 50.000 0.00 0.00 0.00 1.90
2809 3855 0.947244 GCCTCAATCCGTGCCAATAG 59.053 55.000 0.00 0.00 0.00 1.73
2810 3856 1.475034 GCCTCAATCCGTGCCAATAGA 60.475 52.381 0.00 0.00 0.00 1.98
2811 3857 2.487934 CCTCAATCCGTGCCAATAGAG 58.512 52.381 0.00 0.00 0.00 2.43
2813 3859 2.868583 CTCAATCCGTGCCAATAGAGTG 59.131 50.000 0.00 0.00 0.00 3.51
2814 3860 2.236146 TCAATCCGTGCCAATAGAGTGT 59.764 45.455 0.00 0.00 0.00 3.55
2815 3861 2.604046 ATCCGTGCCAATAGAGTGTC 57.396 50.000 0.00 0.00 0.00 3.67
2816 3862 1.262417 TCCGTGCCAATAGAGTGTCA 58.738 50.000 0.00 0.00 0.00 3.58
2817 3863 1.067142 TCCGTGCCAATAGAGTGTCAC 60.067 52.381 0.00 0.00 0.00 3.67
2821 3867 3.003480 GTGCCAATAGAGTGTCACCTTC 58.997 50.000 0.00 0.00 0.00 3.46
2822 3868 2.906389 TGCCAATAGAGTGTCACCTTCT 59.094 45.455 0.00 0.00 0.00 2.85
2823 3869 3.055819 TGCCAATAGAGTGTCACCTTCTC 60.056 47.826 0.00 0.00 0.00 2.87
2824 3870 3.680196 GCCAATAGAGTGTCACCTTCTCC 60.680 52.174 0.00 0.00 0.00 3.71
2825 3871 3.515502 CCAATAGAGTGTCACCTTCTCCA 59.484 47.826 0.00 0.00 0.00 3.86
2826 3872 4.163078 CCAATAGAGTGTCACCTTCTCCAT 59.837 45.833 0.00 0.00 0.00 3.41
2827 3873 5.114780 CAATAGAGTGTCACCTTCTCCATG 58.885 45.833 0.00 0.00 0.00 3.66
2828 3874 1.905215 AGAGTGTCACCTTCTCCATGG 59.095 52.381 4.97 4.97 0.00 3.66
2829 3875 0.326264 AGTGTCACCTTCTCCATGGC 59.674 55.000 6.96 0.00 0.00 4.40
2830 3876 0.036732 GTGTCACCTTCTCCATGGCA 59.963 55.000 6.96 0.00 0.00 4.92
2831 3877 0.770499 TGTCACCTTCTCCATGGCAA 59.230 50.000 6.96 0.94 0.00 4.52
2833 3879 2.575735 TGTCACCTTCTCCATGGCAATA 59.424 45.455 6.96 0.00 0.00 1.90
2834 3880 3.209410 GTCACCTTCTCCATGGCAATAG 58.791 50.000 6.96 0.00 0.00 1.73
2835 3881 2.173356 TCACCTTCTCCATGGCAATAGG 59.827 50.000 6.96 12.96 0.00 2.57
2839 3885 3.181440 CCTTCTCCATGGCAATAGGCTTA 60.181 47.826 6.96 0.00 44.01 3.09
2841 3887 2.106511 TCTCCATGGCAATAGGCTTACC 59.893 50.000 6.96 0.00 44.01 2.85
2846 3892 1.412710 TGGCAATAGGCTTACCGAGAG 59.587 52.381 0.00 0.00 44.01 3.20
2848 3894 2.546162 GGCAATAGGCTTACCGAGAGTC 60.546 54.545 0.00 0.00 44.01 3.36
2849 3895 2.362717 GCAATAGGCTTACCGAGAGTCT 59.637 50.000 0.00 0.00 42.76 3.24
2850 3896 3.181474 GCAATAGGCTTACCGAGAGTCTT 60.181 47.826 0.00 0.00 42.76 3.01
2851 3897 4.680975 GCAATAGGCTTACCGAGAGTCTTT 60.681 45.833 0.00 0.00 42.76 2.52
2852 3898 5.451520 GCAATAGGCTTACCGAGAGTCTTTA 60.452 44.000 0.00 0.00 42.76 1.85
2853 3899 6.210078 CAATAGGCTTACCGAGAGTCTTTAG 58.790 44.000 0.00 0.00 42.76 1.85
2854 3900 3.025262 AGGCTTACCGAGAGTCTTTAGG 58.975 50.000 0.00 1.28 42.76 2.69
2855 3901 2.481622 GGCTTACCGAGAGTCTTTAGGC 60.482 54.545 9.36 6.57 0.00 3.93
2856 3902 2.427812 GCTTACCGAGAGTCTTTAGGCT 59.572 50.000 9.36 0.00 0.00 4.58
2857 3903 3.631227 GCTTACCGAGAGTCTTTAGGCTA 59.369 47.826 9.36 0.00 0.00 3.93
2858 3904 4.278919 GCTTACCGAGAGTCTTTAGGCTAT 59.721 45.833 0.00 0.00 0.00 2.97
2859 3905 5.472820 GCTTACCGAGAGTCTTTAGGCTATA 59.527 44.000 0.00 0.00 0.00 1.31
2860 3906 6.348704 GCTTACCGAGAGTCTTTAGGCTATAG 60.349 46.154 5.71 5.71 0.00 1.31
2861 3907 5.307544 ACCGAGAGTCTTTAGGCTATAGA 57.692 43.478 10.19 10.19 0.00 1.98
2862 3908 5.310451 ACCGAGAGTCTTTAGGCTATAGAG 58.690 45.833 13.97 5.34 0.00 2.43
2863 3909 5.163174 ACCGAGAGTCTTTAGGCTATAGAGT 60.163 44.000 18.54 18.54 0.00 3.24
2864 3910 5.766174 CCGAGAGTCTTTAGGCTATAGAGTT 59.234 44.000 19.22 10.04 0.00 3.01
2865 3911 6.072893 CCGAGAGTCTTTAGGCTATAGAGTTC 60.073 46.154 19.22 16.22 0.00 3.01
2866 3912 6.483974 CGAGAGTCTTTAGGCTATAGAGTTCA 59.516 42.308 19.22 0.00 0.00 3.18
2867 3913 7.174253 CGAGAGTCTTTAGGCTATAGAGTTCAT 59.826 40.741 19.22 11.22 0.00 2.57
2868 3914 8.404107 AGAGTCTTTAGGCTATAGAGTTCATC 57.596 38.462 19.22 9.69 0.00 2.92
2869 3915 8.224720 AGAGTCTTTAGGCTATAGAGTTCATCT 58.775 37.037 19.22 11.33 42.47 2.90
2870 3916 8.776061 AGTCTTTAGGCTATAGAGTTCATCTT 57.224 34.615 13.97 0.00 39.64 2.40
2871 3917 8.856103 AGTCTTTAGGCTATAGAGTTCATCTTC 58.144 37.037 13.97 1.32 39.64 2.87
2872 3918 8.856103 GTCTTTAGGCTATAGAGTTCATCTTCT 58.144 37.037 13.97 0.00 39.64 2.85
2873 3919 9.073475 TCTTTAGGCTATAGAGTTCATCTTCTC 57.927 37.037 10.19 0.00 39.64 2.87
2874 3920 7.768807 TTAGGCTATAGAGTTCATCTTCTCC 57.231 40.000 3.21 0.00 39.64 3.71
2875 3921 5.710646 AGGCTATAGAGTTCATCTTCTCCA 58.289 41.667 3.21 0.00 39.64 3.86
2876 3922 6.322126 AGGCTATAGAGTTCATCTTCTCCAT 58.678 40.000 3.21 0.00 39.64 3.41
2877 3923 6.211184 AGGCTATAGAGTTCATCTTCTCCATG 59.789 42.308 3.21 0.00 39.64 3.66
2878 3924 6.397272 GCTATAGAGTTCATCTTCTCCATGG 58.603 44.000 4.97 4.97 39.64 3.66
2879 3925 3.557228 AGAGTTCATCTTCTCCATGGC 57.443 47.619 6.96 0.00 32.99 4.40
2880 3926 2.842496 AGAGTTCATCTTCTCCATGGCA 59.158 45.455 6.96 0.00 32.99 4.92
2881 3927 3.265221 AGAGTTCATCTTCTCCATGGCAA 59.735 43.478 6.96 0.94 32.99 4.52
2882 3928 4.079901 AGAGTTCATCTTCTCCATGGCAAT 60.080 41.667 6.96 0.00 32.99 3.56
2883 3929 5.131642 AGAGTTCATCTTCTCCATGGCAATA 59.868 40.000 6.96 0.00 32.99 1.90
2884 3930 5.374921 AGTTCATCTTCTCCATGGCAATAG 58.625 41.667 6.96 0.00 0.00 1.73
2934 3980 3.698040 GTGTCATCTTCTCCATGGCAATT 59.302 43.478 6.96 0.00 37.60 2.32
3032 4079 8.778358 TGACCATTAATTTTACCAACAAAATGC 58.222 29.630 0.00 0.00 37.97 3.56
3050 4097 8.359642 ACAAAATGCGAGTTATATGCCATAAAT 58.640 29.630 0.00 0.00 0.00 1.40
3051 4098 8.641155 CAAAATGCGAGTTATATGCCATAAATG 58.359 33.333 0.00 0.00 0.00 2.32
3069 4116 1.401761 TGGTATGCCATTGGATGCAC 58.598 50.000 6.95 0.00 40.88 4.57
3070 4117 1.341778 TGGTATGCCATTGGATGCACA 60.342 47.619 6.95 0.00 40.88 4.57
3071 4118 1.965643 GGTATGCCATTGGATGCACAT 59.034 47.619 6.95 2.48 40.88 3.21
3072 4119 2.366266 GGTATGCCATTGGATGCACATT 59.634 45.455 6.95 0.00 40.88 2.71
3074 4121 3.637911 ATGCCATTGGATGCACATTTT 57.362 38.095 6.95 0.00 40.88 1.82
3077 4124 3.244457 TGCCATTGGATGCACATTTTCAA 60.244 39.130 6.95 0.00 31.31 2.69
3079 4126 4.142773 GCCATTGGATGCACATTTTCAAAG 60.143 41.667 6.95 0.00 0.00 2.77
3080 4127 5.239351 CCATTGGATGCACATTTTCAAAGA 58.761 37.500 0.00 0.00 0.00 2.52
3081 4128 5.701750 CCATTGGATGCACATTTTCAAAGAA 59.298 36.000 0.00 0.00 0.00 2.52
3087 4141 6.073602 GGATGCACATTTTCAAAGAACTTTCC 60.074 38.462 0.00 0.00 0.00 3.13
3236 4292 4.202233 ACAATTGCACAATCACACATCCAA 60.202 37.500 5.05 0.00 0.00 3.53
3356 4412 4.518970 ACGACACAATTTTGGAGCTGTAAT 59.481 37.500 0.00 0.00 0.00 1.89
3368 4424 7.801716 TTGGAGCTGTAATTATCATGGTAAC 57.198 36.000 0.00 0.00 0.00 2.50
3597 4653 2.521958 ATTGCGTGGAGGGAGGTTCG 62.522 60.000 0.00 0.00 0.00 3.95
3635 4691 4.078639 AGATTAAGAGAATGGCCTTCGG 57.921 45.455 3.32 0.00 38.98 4.30
3720 4776 7.060421 TCTTCCTTCGGAGGCAATTTATTATT 58.940 34.615 4.24 0.00 43.21 1.40
3721 4777 7.559897 TCTTCCTTCGGAGGCAATTTATTATTT 59.440 33.333 4.24 0.00 43.21 1.40
3722 4778 7.272037 TCCTTCGGAGGCAATTTATTATTTC 57.728 36.000 4.24 0.00 43.21 2.17
3762 4821 4.396166 CCAGTGCCTAATAGGTTGAAACTG 59.604 45.833 8.28 12.67 37.80 3.16
4009 5068 3.784701 TCTAACCTTCTCTGATGTCGC 57.215 47.619 0.00 0.00 0.00 5.19
4161 5220 3.960102 AGGCTGTCCAAATTTTTGACTCA 59.040 39.130 15.17 1.11 40.55 3.41
4639 5698 4.381612 CGGCAGAAGTTGTAGATTCCACTA 60.382 45.833 0.00 0.00 0.00 2.74
4646 5705 5.725362 AGTTGTAGATTCCACTACTTGAGC 58.275 41.667 0.00 0.00 42.01 4.26
4728 5787 5.710513 TTGCTTATGTGTTCTGCATTTCT 57.289 34.783 0.00 0.00 33.50 2.52
4789 5848 3.975312 TGGGGGTGTAAGAAAGTGTCTAA 59.025 43.478 0.00 0.00 34.56 2.10
5014 7309 4.742438 TCAGAAATTTGTACCGCACTTC 57.258 40.909 0.00 0.00 0.00 3.01
5058 7353 5.069383 GGAGAGGAATCCCTAGTTGTTAGTC 59.931 48.000 0.00 0.00 44.53 2.59
5073 7368 8.771920 AGTTGTTAGTCGTATGATGATTTTGA 57.228 30.769 0.00 0.00 0.00 2.69
5146 7447 2.159462 GCAGCTTTTGATGACTAGCCAC 60.159 50.000 0.00 0.00 38.24 5.01
5205 7508 7.615757 AGCCAAGCTGGTATTAGTAAGAAAAAT 59.384 33.333 0.00 0.00 40.46 1.82
5237 7540 4.067896 AGCCTGATATTTGTTATCGCTGG 58.932 43.478 0.00 0.00 39.77 4.85
5242 7545 6.873605 CCTGATATTTGTTATCGCTGGTGATA 59.126 38.462 0.36 0.36 39.77 2.15
5261 7564 9.575868 TGGTGATATTTTTGTTGGTAGTTTCTA 57.424 29.630 0.00 0.00 0.00 2.10
5285 7588 4.142816 GCTAAGCAAACTCGTGTGATTCAT 60.143 41.667 0.00 0.00 0.00 2.57
5321 7624 8.429641 TCTTATATGATACTCAACCAAAGGACC 58.570 37.037 0.00 0.00 0.00 4.46
5322 7625 3.713826 TGATACTCAACCAAAGGACCC 57.286 47.619 0.00 0.00 0.00 4.46
5323 7626 2.983192 TGATACTCAACCAAAGGACCCA 59.017 45.455 0.00 0.00 0.00 4.51
5350 7653 4.820284 TGATACTCAGACTATGCACTCG 57.180 45.455 0.00 0.00 0.00 4.18
5351 7654 3.565902 TGATACTCAGACTATGCACTCGG 59.434 47.826 0.00 0.00 0.00 4.63
5352 7655 2.130272 ACTCAGACTATGCACTCGGA 57.870 50.000 0.00 0.00 0.00 4.55
5353 7656 1.746220 ACTCAGACTATGCACTCGGAC 59.254 52.381 0.00 0.00 0.00 4.79
5354 7657 1.745653 CTCAGACTATGCACTCGGACA 59.254 52.381 0.00 0.00 0.00 4.02
5355 7658 2.164422 CTCAGACTATGCACTCGGACAA 59.836 50.000 0.00 0.00 0.00 3.18
5356 7659 2.094700 TCAGACTATGCACTCGGACAAC 60.095 50.000 0.00 0.00 0.00 3.32
5357 7660 2.094494 CAGACTATGCACTCGGACAACT 60.094 50.000 0.00 0.00 0.00 3.16
5358 7661 3.128764 CAGACTATGCACTCGGACAACTA 59.871 47.826 0.00 0.00 0.00 2.24
5359 7662 3.762288 AGACTATGCACTCGGACAACTAA 59.238 43.478 0.00 0.00 0.00 2.24
5360 7663 4.219944 AGACTATGCACTCGGACAACTAAA 59.780 41.667 0.00 0.00 0.00 1.85
5361 7664 4.890088 ACTATGCACTCGGACAACTAAAA 58.110 39.130 0.00 0.00 0.00 1.52
5362 7665 4.689345 ACTATGCACTCGGACAACTAAAAC 59.311 41.667 0.00 0.00 0.00 2.43
5363 7666 3.188159 TGCACTCGGACAACTAAAACT 57.812 42.857 0.00 0.00 0.00 2.66
5364 7667 2.869801 TGCACTCGGACAACTAAAACTG 59.130 45.455 0.00 0.00 0.00 3.16
5365 7668 2.349532 GCACTCGGACAACTAAAACTGC 60.350 50.000 0.00 0.00 0.00 4.40
5366 7669 2.223377 CACTCGGACAACTAAAACTGCC 59.777 50.000 0.00 0.00 0.00 4.85
5367 7670 1.459592 CTCGGACAACTAAAACTGCCG 59.540 52.381 0.00 0.00 35.16 5.69
5368 7671 0.110373 CGGACAACTAAAACTGCCGC 60.110 55.000 0.00 0.00 0.00 6.53
5369 7672 1.235724 GGACAACTAAAACTGCCGCT 58.764 50.000 0.00 0.00 0.00 5.52
5370 7673 1.607148 GGACAACTAAAACTGCCGCTT 59.393 47.619 0.00 0.00 0.00 4.68
5371 7674 2.034179 GGACAACTAAAACTGCCGCTTT 59.966 45.455 0.00 0.00 0.00 3.51
5372 7675 3.042887 GACAACTAAAACTGCCGCTTTG 58.957 45.455 0.00 0.00 0.00 2.77
5373 7676 1.786579 CAACTAAAACTGCCGCTTTGC 59.213 47.619 0.00 0.00 0.00 3.68
5374 7677 1.318576 ACTAAAACTGCCGCTTTGCT 58.681 45.000 0.00 0.00 0.00 3.91
5375 7678 1.266989 ACTAAAACTGCCGCTTTGCTC 59.733 47.619 0.00 0.00 0.00 4.26
5376 7679 1.537202 CTAAAACTGCCGCTTTGCTCT 59.463 47.619 0.00 0.00 0.00 4.09
5377 7680 0.746659 AAAACTGCCGCTTTGCTCTT 59.253 45.000 0.00 0.00 0.00 2.85
5378 7681 0.746659 AAACTGCCGCTTTGCTCTTT 59.253 45.000 0.00 0.00 0.00 2.52
5379 7682 1.604604 AACTGCCGCTTTGCTCTTTA 58.395 45.000 0.00 0.00 0.00 1.85
5380 7683 1.160137 ACTGCCGCTTTGCTCTTTAG 58.840 50.000 0.00 0.00 0.00 1.85
5381 7684 1.160137 CTGCCGCTTTGCTCTTTAGT 58.840 50.000 0.00 0.00 0.00 2.24
5382 7685 0.874390 TGCCGCTTTGCTCTTTAGTG 59.126 50.000 0.00 0.00 0.00 2.74
5383 7686 0.455126 GCCGCTTTGCTCTTTAGTGC 60.455 55.000 0.00 0.00 35.32 4.40
5384 7687 1.160137 CCGCTTTGCTCTTTAGTGCT 58.840 50.000 5.52 0.00 35.73 4.40
5385 7688 1.135859 CCGCTTTGCTCTTTAGTGCTG 60.136 52.381 5.52 0.00 35.73 4.41
5386 7689 1.135859 CGCTTTGCTCTTTAGTGCTGG 60.136 52.381 5.52 0.00 35.73 4.85
5387 7690 1.200948 GCTTTGCTCTTTAGTGCTGGG 59.799 52.381 5.52 0.00 35.73 4.45
5388 7691 2.783135 CTTTGCTCTTTAGTGCTGGGA 58.217 47.619 5.52 0.00 35.73 4.37
5389 7692 3.350833 CTTTGCTCTTTAGTGCTGGGAT 58.649 45.455 5.52 0.00 35.73 3.85
5390 7693 2.698855 TGCTCTTTAGTGCTGGGATC 57.301 50.000 5.52 0.00 35.73 3.36
5391 7694 1.908619 TGCTCTTTAGTGCTGGGATCA 59.091 47.619 0.00 0.00 35.73 2.92
5392 7695 2.507058 TGCTCTTTAGTGCTGGGATCAT 59.493 45.455 0.00 0.00 35.73 2.45
5393 7696 3.711190 TGCTCTTTAGTGCTGGGATCATA 59.289 43.478 0.00 0.00 35.73 2.15
5394 7697 4.349048 TGCTCTTTAGTGCTGGGATCATAT 59.651 41.667 0.00 0.00 35.73 1.78
5395 7698 5.163163 TGCTCTTTAGTGCTGGGATCATATT 60.163 40.000 0.00 0.00 35.73 1.28
5396 7699 6.043127 TGCTCTTTAGTGCTGGGATCATATTA 59.957 38.462 0.00 0.00 35.73 0.98
5397 7700 7.108847 GCTCTTTAGTGCTGGGATCATATTAT 58.891 38.462 0.00 0.00 0.00 1.28
5398 7701 7.609532 GCTCTTTAGTGCTGGGATCATATTATT 59.390 37.037 0.00 0.00 0.00 1.40
5399 7702 9.160496 CTCTTTAGTGCTGGGATCATATTATTC 57.840 37.037 0.00 0.00 0.00 1.75
5400 7703 8.103305 TCTTTAGTGCTGGGATCATATTATTCC 58.897 37.037 0.00 0.00 0.00 3.01
5401 7704 5.848286 AGTGCTGGGATCATATTATTCCA 57.152 39.130 0.00 0.00 33.23 3.53
5420 7723 7.688918 ATTCCAGATAGAAACAGAGGAATCT 57.311 36.000 0.00 0.00 39.48 2.40
5421 7724 6.723298 TCCAGATAGAAACAGAGGAATCTC 57.277 41.667 0.00 0.00 40.25 2.75
5422 7725 6.197903 TCCAGATAGAAACAGAGGAATCTCA 58.802 40.000 0.00 0.00 42.34 3.27
5423 7726 6.323482 TCCAGATAGAAACAGAGGAATCTCAG 59.677 42.308 0.00 0.00 42.34 3.35
5424 7727 6.098124 CCAGATAGAAACAGAGGAATCTCAGT 59.902 42.308 0.00 0.00 40.76 3.41
5425 7728 6.979817 CAGATAGAAACAGAGGAATCTCAGTG 59.020 42.308 0.00 0.00 39.28 3.66
5426 7729 6.667414 AGATAGAAACAGAGGAATCTCAGTGT 59.333 38.462 0.00 0.00 39.28 3.55
5427 7730 5.559148 AGAAACAGAGGAATCTCAGTGTT 57.441 39.130 0.00 0.00 39.28 3.32
5428 7731 5.934781 AGAAACAGAGGAATCTCAGTGTTT 58.065 37.500 11.12 11.12 44.19 2.83
5429 7732 5.762218 AGAAACAGAGGAATCTCAGTGTTTG 59.238 40.000 14.27 0.00 42.89 2.93
5430 7733 4.963318 ACAGAGGAATCTCAGTGTTTGA 57.037 40.909 0.00 0.00 42.34 2.69
5431 7734 5.495926 ACAGAGGAATCTCAGTGTTTGAT 57.504 39.130 0.00 0.00 42.34 2.57
5432 7735 5.243981 ACAGAGGAATCTCAGTGTTTGATG 58.756 41.667 0.00 0.00 42.34 3.07
5433 7736 5.012458 ACAGAGGAATCTCAGTGTTTGATGA 59.988 40.000 0.00 0.00 42.34 2.92
5434 7737 5.350914 CAGAGGAATCTCAGTGTTTGATGAC 59.649 44.000 0.00 0.00 42.34 3.06
5435 7738 5.012458 AGAGGAATCTCAGTGTTTGATGACA 59.988 40.000 0.00 0.00 42.34 3.58
5436 7739 5.813383 AGGAATCTCAGTGTTTGATGACAT 58.187 37.500 0.00 0.00 34.68 3.06
5437 7740 6.243900 AGGAATCTCAGTGTTTGATGACATT 58.756 36.000 0.00 0.00 34.68 2.71
5438 7741 6.373774 AGGAATCTCAGTGTTTGATGACATTC 59.626 38.462 0.00 0.00 34.68 2.67
5439 7742 6.373774 GGAATCTCAGTGTTTGATGACATTCT 59.626 38.462 0.00 0.00 34.68 2.40
5440 7743 7.550551 GGAATCTCAGTGTTTGATGACATTCTA 59.449 37.037 0.00 0.00 34.68 2.10
5441 7744 7.840342 ATCTCAGTGTTTGATGACATTCTAC 57.160 36.000 0.00 0.00 34.68 2.59
5442 7745 6.997655 TCTCAGTGTTTGATGACATTCTACT 58.002 36.000 0.00 0.00 34.68 2.57
5443 7746 7.445121 TCTCAGTGTTTGATGACATTCTACTT 58.555 34.615 0.00 0.00 34.68 2.24
5444 7747 7.386025 TCTCAGTGTTTGATGACATTCTACTTG 59.614 37.037 0.00 0.00 34.68 3.16
5445 7748 6.073058 TCAGTGTTTGATGACATTCTACTTGC 60.073 38.462 0.00 0.00 0.00 4.01
5446 7749 6.000219 AGTGTTTGATGACATTCTACTTGCT 59.000 36.000 0.00 0.00 0.00 3.91
5447 7750 6.148480 AGTGTTTGATGACATTCTACTTGCTC 59.852 38.462 0.00 0.00 0.00 4.26
5448 7751 6.148480 GTGTTTGATGACATTCTACTTGCTCT 59.852 38.462 0.00 0.00 0.00 4.09
5449 7752 6.148315 TGTTTGATGACATTCTACTTGCTCTG 59.852 38.462 0.00 0.00 0.00 3.35
5450 7753 4.186926 TGATGACATTCTACTTGCTCTGC 58.813 43.478 0.00 0.00 0.00 4.26
5451 7754 3.969287 TGACATTCTACTTGCTCTGCT 57.031 42.857 0.00 0.00 0.00 4.24
5452 7755 4.277515 TGACATTCTACTTGCTCTGCTT 57.722 40.909 0.00 0.00 0.00 3.91
5453 7756 4.248859 TGACATTCTACTTGCTCTGCTTC 58.751 43.478 0.00 0.00 0.00 3.86
5454 7757 4.248859 GACATTCTACTTGCTCTGCTTCA 58.751 43.478 0.00 0.00 0.00 3.02
5455 7758 4.841422 ACATTCTACTTGCTCTGCTTCAT 58.159 39.130 0.00 0.00 0.00 2.57
5456 7759 4.874966 ACATTCTACTTGCTCTGCTTCATC 59.125 41.667 0.00 0.00 0.00 2.92
5457 7760 4.815533 TTCTACTTGCTCTGCTTCATCT 57.184 40.909 0.00 0.00 0.00 2.90
5458 7761 5.921962 TTCTACTTGCTCTGCTTCATCTA 57.078 39.130 0.00 0.00 0.00 1.98
5459 7762 5.255710 TCTACTTGCTCTGCTTCATCTAC 57.744 43.478 0.00 0.00 0.00 2.59
5460 7763 3.258971 ACTTGCTCTGCTTCATCTACC 57.741 47.619 0.00 0.00 0.00 3.18
5461 7764 2.568956 ACTTGCTCTGCTTCATCTACCA 59.431 45.455 0.00 0.00 0.00 3.25
5462 7765 2.680312 TGCTCTGCTTCATCTACCAC 57.320 50.000 0.00 0.00 0.00 4.16
5463 7766 1.134995 TGCTCTGCTTCATCTACCACG 60.135 52.381 0.00 0.00 0.00 4.94
5464 7767 1.804372 GCTCTGCTTCATCTACCACGG 60.804 57.143 0.00 0.00 0.00 4.94
5465 7768 0.824109 TCTGCTTCATCTACCACGGG 59.176 55.000 0.00 0.00 0.00 5.28
5466 7769 0.824109 CTGCTTCATCTACCACGGGA 59.176 55.000 0.00 0.00 0.00 5.14
5467 7770 1.207089 CTGCTTCATCTACCACGGGAA 59.793 52.381 0.00 0.00 0.00 3.97
5468 7771 1.207089 TGCTTCATCTACCACGGGAAG 59.793 52.381 0.00 0.00 38.34 3.46
5469 7772 1.207329 GCTTCATCTACCACGGGAAGT 59.793 52.381 0.00 0.00 37.77 3.01
5470 7773 2.354805 GCTTCATCTACCACGGGAAGTT 60.355 50.000 0.00 0.00 37.77 2.66
5471 7774 3.262420 CTTCATCTACCACGGGAAGTTG 58.738 50.000 0.00 0.00 32.39 3.16
5472 7775 1.066430 TCATCTACCACGGGAAGTTGC 60.066 52.381 0.00 0.00 0.00 4.17
5473 7776 0.252197 ATCTACCACGGGAAGTTGCC 59.748 55.000 2.72 2.72 0.00 4.52
5474 7777 0.834687 TCTACCACGGGAAGTTGCCT 60.835 55.000 12.04 0.00 0.00 4.75
5475 7778 0.036306 CTACCACGGGAAGTTGCCTT 59.964 55.000 12.04 0.00 0.00 4.35
5476 7779 0.250553 TACCACGGGAAGTTGCCTTG 60.251 55.000 12.36 12.36 0.00 3.61
5477 7780 2.268076 CCACGGGAAGTTGCCTTGG 61.268 63.158 22.00 22.00 0.00 3.61
5478 7781 1.228124 CACGGGAAGTTGCCTTGGA 60.228 57.895 12.04 0.00 0.00 3.53
5479 7782 1.228154 ACGGGAAGTTGCCTTGGAC 60.228 57.895 12.04 0.00 0.00 4.02
5480 7783 1.228124 CGGGAAGTTGCCTTGGACA 60.228 57.895 12.04 0.00 0.00 4.02
5481 7784 0.609131 CGGGAAGTTGCCTTGGACAT 60.609 55.000 12.04 0.00 0.00 3.06
5482 7785 1.632589 GGGAAGTTGCCTTGGACATT 58.367 50.000 6.10 0.00 0.00 2.71
5483 7786 1.273327 GGGAAGTTGCCTTGGACATTG 59.727 52.381 6.10 0.00 0.00 2.82
5484 7787 1.963515 GGAAGTTGCCTTGGACATTGT 59.036 47.619 0.00 0.00 0.00 2.71
5485 7788 2.288395 GGAAGTTGCCTTGGACATTGTG 60.288 50.000 0.00 0.00 0.00 3.33
5486 7789 2.363306 AGTTGCCTTGGACATTGTGA 57.637 45.000 0.00 0.00 0.00 3.58
5487 7790 2.880443 AGTTGCCTTGGACATTGTGAT 58.120 42.857 0.00 0.00 0.00 3.06
5488 7791 2.821969 AGTTGCCTTGGACATTGTGATC 59.178 45.455 0.00 0.00 0.00 2.92
5489 7792 2.557924 GTTGCCTTGGACATTGTGATCA 59.442 45.455 0.00 0.00 0.00 2.92
5490 7793 3.090210 TGCCTTGGACATTGTGATCAT 57.910 42.857 0.00 0.00 0.00 2.45
5491 7794 2.756207 TGCCTTGGACATTGTGATCATG 59.244 45.455 0.00 0.00 0.00 3.07
5492 7795 2.100252 GCCTTGGACATTGTGATCATGG 59.900 50.000 0.00 3.48 0.00 3.66
5493 7796 3.623703 CCTTGGACATTGTGATCATGGA 58.376 45.455 0.00 0.00 0.00 3.41
5494 7797 4.018490 CCTTGGACATTGTGATCATGGAA 58.982 43.478 0.00 0.00 0.00 3.53
5495 7798 4.647853 CCTTGGACATTGTGATCATGGAAT 59.352 41.667 0.00 0.00 0.00 3.01
5497 7800 3.382227 TGGACATTGTGATCATGGAATGC 59.618 43.478 18.11 13.17 46.21 3.56
5498 7801 3.635373 GGACATTGTGATCATGGAATGCT 59.365 43.478 18.11 10.12 46.21 3.79
5499 7802 4.499188 GGACATTGTGATCATGGAATGCTG 60.499 45.833 18.11 4.73 46.21 4.41
5500 7803 3.383505 ACATTGTGATCATGGAATGCTGG 59.616 43.478 18.11 3.42 46.21 4.85
5501 7804 2.061509 TGTGATCATGGAATGCTGGG 57.938 50.000 0.00 0.00 46.21 4.45
5502 7805 1.325355 GTGATCATGGAATGCTGGGG 58.675 55.000 0.00 0.00 46.21 4.96
5503 7806 0.928505 TGATCATGGAATGCTGGGGT 59.071 50.000 0.00 0.00 46.21 4.95
5504 7807 1.325355 GATCATGGAATGCTGGGGTG 58.675 55.000 0.00 0.00 46.21 4.61
5505 7808 0.632835 ATCATGGAATGCTGGGGTGT 59.367 50.000 0.00 0.00 46.21 4.16
5506 7809 0.034186 TCATGGAATGCTGGGGTGTC 60.034 55.000 0.00 0.00 46.21 3.67
5507 7810 0.033796 CATGGAATGCTGGGGTGTCT 60.034 55.000 0.00 0.00 37.62 3.41
5508 7811 0.033796 ATGGAATGCTGGGGTGTCTG 60.034 55.000 0.00 0.00 0.00 3.51
5509 7812 1.379044 GGAATGCTGGGGTGTCTGG 60.379 63.158 0.00 0.00 0.00 3.86
5510 7813 1.380302 GAATGCTGGGGTGTCTGGT 59.620 57.895 0.00 0.00 0.00 4.00
5511 7814 0.678048 GAATGCTGGGGTGTCTGGTC 60.678 60.000 0.00 0.00 0.00 4.02
5512 7815 1.136329 AATGCTGGGGTGTCTGGTCT 61.136 55.000 0.00 0.00 0.00 3.85
5513 7816 0.252696 ATGCTGGGGTGTCTGGTCTA 60.253 55.000 0.00 0.00 0.00 2.59
5514 7817 1.192146 TGCTGGGGTGTCTGGTCTAC 61.192 60.000 0.00 0.00 0.00 2.59
5515 7818 0.905337 GCTGGGGTGTCTGGTCTACT 60.905 60.000 0.00 0.00 0.00 2.57
5516 7819 1.618888 GCTGGGGTGTCTGGTCTACTA 60.619 57.143 0.00 0.00 0.00 1.82
5517 7820 2.379972 CTGGGGTGTCTGGTCTACTAG 58.620 57.143 0.00 0.00 0.00 2.57
5518 7821 1.997791 TGGGGTGTCTGGTCTACTAGA 59.002 52.381 0.00 0.00 0.00 2.43
5519 7822 2.380932 TGGGGTGTCTGGTCTACTAGAA 59.619 50.000 0.00 0.00 35.21 2.10
5520 7823 3.181415 TGGGGTGTCTGGTCTACTAGAAA 60.181 47.826 0.00 0.00 35.21 2.52
5521 7824 4.031611 GGGGTGTCTGGTCTACTAGAAAT 58.968 47.826 0.00 0.00 35.21 2.17
5522 7825 4.141914 GGGGTGTCTGGTCTACTAGAAATG 60.142 50.000 0.00 0.00 35.21 2.32
5523 7826 4.710375 GGGTGTCTGGTCTACTAGAAATGA 59.290 45.833 0.00 0.00 35.21 2.57
5524 7827 5.364157 GGGTGTCTGGTCTACTAGAAATGAT 59.636 44.000 0.00 0.00 35.21 2.45
5525 7828 6.550108 GGGTGTCTGGTCTACTAGAAATGATA 59.450 42.308 0.00 0.00 35.21 2.15
5526 7829 7.069578 GGGTGTCTGGTCTACTAGAAATGATAA 59.930 40.741 0.00 0.00 35.21 1.75
5527 7830 8.138712 GGTGTCTGGTCTACTAGAAATGATAAG 58.861 40.741 0.00 0.00 35.21 1.73
5528 7831 8.904834 GTGTCTGGTCTACTAGAAATGATAAGA 58.095 37.037 0.00 0.00 35.21 2.10
5529 7832 9.647918 TGTCTGGTCTACTAGAAATGATAAGAT 57.352 33.333 0.00 0.00 35.21 2.40
5541 7844 8.436046 AGAAATGATAAGATCTTCAAGTCTGC 57.564 34.615 12.24 0.00 0.00 4.26
5542 7845 8.266473 AGAAATGATAAGATCTTCAAGTCTGCT 58.734 33.333 12.24 0.00 0.00 4.24
5543 7846 9.539825 GAAATGATAAGATCTTCAAGTCTGCTA 57.460 33.333 12.24 0.00 0.00 3.49
5544 7847 8.885494 AATGATAAGATCTTCAAGTCTGCTAC 57.115 34.615 12.24 0.00 0.00 3.58
5545 7848 7.652524 TGATAAGATCTTCAAGTCTGCTACT 57.347 36.000 12.24 0.00 41.49 2.57
5546 7849 7.711846 TGATAAGATCTTCAAGTCTGCTACTC 58.288 38.462 12.24 0.00 37.50 2.59
5547 7850 5.337578 AAGATCTTCAAGTCTGCTACTCC 57.662 43.478 0.88 0.00 37.50 3.85
5548 7851 4.609301 AGATCTTCAAGTCTGCTACTCCT 58.391 43.478 0.00 0.00 37.50 3.69
5549 7852 4.644685 AGATCTTCAAGTCTGCTACTCCTC 59.355 45.833 0.00 0.00 37.50 3.71
5550 7853 3.767711 TCTTCAAGTCTGCTACTCCTCA 58.232 45.455 0.00 0.00 37.50 3.86
5551 7854 3.508012 TCTTCAAGTCTGCTACTCCTCAC 59.492 47.826 0.00 0.00 37.50 3.51
5552 7855 2.876581 TCAAGTCTGCTACTCCTCACA 58.123 47.619 0.00 0.00 37.50 3.58
5553 7856 3.435275 TCAAGTCTGCTACTCCTCACAT 58.565 45.455 0.00 0.00 37.50 3.21
5554 7857 3.834813 TCAAGTCTGCTACTCCTCACATT 59.165 43.478 0.00 0.00 37.50 2.71
5555 7858 4.081972 TCAAGTCTGCTACTCCTCACATTC 60.082 45.833 0.00 0.00 37.50 2.67
5556 7859 2.763448 AGTCTGCTACTCCTCACATTCC 59.237 50.000 0.00 0.00 30.33 3.01
5557 7860 2.763448 GTCTGCTACTCCTCACATTCCT 59.237 50.000 0.00 0.00 0.00 3.36
5558 7861 2.762887 TCTGCTACTCCTCACATTCCTG 59.237 50.000 0.00 0.00 0.00 3.86
5559 7862 1.833630 TGCTACTCCTCACATTCCTGG 59.166 52.381 0.00 0.00 0.00 4.45
5560 7863 2.111384 GCTACTCCTCACATTCCTGGA 58.889 52.381 0.00 0.00 0.00 3.86
5561 7864 2.703007 GCTACTCCTCACATTCCTGGAT 59.297 50.000 0.00 0.00 0.00 3.41
5562 7865 3.494048 GCTACTCCTCACATTCCTGGATG 60.494 52.174 0.00 0.88 0.00 3.51
5563 7866 1.842562 ACTCCTCACATTCCTGGATGG 59.157 52.381 0.00 0.00 37.10 3.51
5564 7867 2.121948 CTCCTCACATTCCTGGATGGA 58.878 52.381 0.00 0.00 44.51 3.41
5565 7868 2.709934 CTCCTCACATTCCTGGATGGAT 59.290 50.000 0.00 0.00 45.68 3.41
5566 7869 3.125656 TCCTCACATTCCTGGATGGATT 58.874 45.455 0.00 0.00 45.68 3.01
5567 7870 3.137176 TCCTCACATTCCTGGATGGATTC 59.863 47.826 0.00 0.00 45.68 2.52
5568 7871 3.117776 CCTCACATTCCTGGATGGATTCA 60.118 47.826 0.00 0.00 45.68 2.57
5569 7872 3.881688 CTCACATTCCTGGATGGATTCAC 59.118 47.826 0.00 0.00 45.68 3.18
5570 7873 3.524789 TCACATTCCTGGATGGATTCACT 59.475 43.478 0.00 0.00 45.68 3.41
5571 7874 4.721274 TCACATTCCTGGATGGATTCACTA 59.279 41.667 0.00 0.00 45.68 2.74
5572 7875 4.818546 CACATTCCTGGATGGATTCACTAC 59.181 45.833 0.00 0.00 45.68 2.73
5573 7876 4.723789 ACATTCCTGGATGGATTCACTACT 59.276 41.667 0.00 0.00 45.68 2.57
5574 7877 5.192522 ACATTCCTGGATGGATTCACTACTT 59.807 40.000 0.00 0.00 45.68 2.24
5575 7878 4.760530 TCCTGGATGGATTCACTACTTG 57.239 45.455 0.00 0.00 40.56 3.16
5576 7879 3.118261 TCCTGGATGGATTCACTACTTGC 60.118 47.826 0.00 0.00 40.56 4.01
5577 7880 3.370846 CCTGGATGGATTCACTACTTGCA 60.371 47.826 0.00 0.00 38.35 4.08
5578 7881 4.264253 CTGGATGGATTCACTACTTGCAA 58.736 43.478 0.00 0.00 0.00 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 153 7.093509 ACCCAACTATTTTCATATGGTTTCCAC 60.094 37.037 2.13 0.00 35.80 4.02
163 165 5.486735 TCCGTAAGACCCAACTATTTTCA 57.513 39.130 0.00 0.00 43.02 2.69
164 166 6.348786 GGTTTCCGTAAGACCCAACTATTTTC 60.349 42.308 0.00 0.00 43.02 2.29
183 185 7.992008 TGAAATAAATCTATGGTTCGGTTTCC 58.008 34.615 0.00 0.00 0.00 3.13
227 229 9.487790 ACTGTTTGGTAAAATATGGTTTTGATG 57.512 29.630 0.00 0.00 0.00 3.07
264 266 4.895224 TTACTACAGAGTAGTCATGGCG 57.105 45.455 12.64 0.00 39.36 5.69
305 308 9.705290 ATTAACTTCCAATTATGTTGTCCAAAC 57.295 29.630 0.00 0.00 0.00 2.93
341 344 6.117975 ACCAAAATTTAGACTTCTCCCGTA 57.882 37.500 0.00 0.00 0.00 4.02
403 406 9.661563 AGTATTGGAAACGTGAAGTATTTATCA 57.338 29.630 0.00 0.00 0.00 2.15
432 435 4.136796 CAAACAATCTCAAGTCTCCCACA 58.863 43.478 0.00 0.00 0.00 4.17
485 797 7.860373 TGAACCAAAATTTAGATCTGTTTCACG 59.140 33.333 5.18 0.00 0.00 4.35
576 1185 4.511454 CGATTGAACGGTGGATGAACATAT 59.489 41.667 0.00 0.00 0.00 1.78
581 1190 2.465860 ACGATTGAACGGTGGATGAA 57.534 45.000 0.00 0.00 37.61 2.57
591 1200 3.181556 CGTGTGTCTTCGTACGATTGAAC 60.182 47.826 20.27 15.28 38.72 3.18
595 1204 1.536766 TCCGTGTGTCTTCGTACGATT 59.463 47.619 20.27 0.00 38.72 3.34
597 1206 0.235665 GTCCGTGTGTCTTCGTACGA 59.764 55.000 15.28 15.28 38.72 3.43
629 1238 3.426426 GCCCGCGTGTTGTTCATTAATTA 60.426 43.478 4.92 0.00 0.00 1.40
630 1239 2.669950 GCCCGCGTGTTGTTCATTAATT 60.670 45.455 4.92 0.00 0.00 1.40
631 1240 1.135517 GCCCGCGTGTTGTTCATTAAT 60.136 47.619 4.92 0.00 0.00 1.40
632 1241 0.238817 GCCCGCGTGTTGTTCATTAA 59.761 50.000 4.92 0.00 0.00 1.40
633 1242 0.604243 AGCCCGCGTGTTGTTCATTA 60.604 50.000 4.92 0.00 0.00 1.90
634 1243 1.896660 AGCCCGCGTGTTGTTCATT 60.897 52.632 4.92 0.00 0.00 2.57
635 1244 2.281484 AGCCCGCGTGTTGTTCAT 60.281 55.556 4.92 0.00 0.00 2.57
665 1274 3.190535 GTGCTATTTTTGTGTCGTCCCAT 59.809 43.478 0.00 0.00 0.00 4.00
698 1697 0.030297 ATCTCCAGATGGGCCACTCT 60.030 55.000 9.28 10.61 36.21 3.24
736 1735 3.551407 GGCAGGGGATCCTCGTCC 61.551 72.222 12.58 10.58 42.67 4.79
737 1736 3.917760 CGGCAGGGGATCCTCGTC 61.918 72.222 12.58 4.80 42.67 4.20
738 1737 4.779733 ACGGCAGGGGATCCTCGT 62.780 66.667 12.58 11.06 42.67 4.18
739 1738 4.227134 CACGGCAGGGGATCCTCG 62.227 72.222 12.58 5.37 42.67 4.63
740 1739 4.554036 GCACGGCAGGGGATCCTC 62.554 72.222 12.58 7.90 42.67 3.71
769 1768 1.078759 CCATGAGTCAGCGACGGAAC 61.079 60.000 0.00 0.00 37.67 3.62
770 1769 1.215382 CCATGAGTCAGCGACGGAA 59.785 57.895 0.00 0.00 37.67 4.30
771 1770 2.710902 CCCATGAGTCAGCGACGGA 61.711 63.158 0.00 0.00 37.67 4.69
772 1771 2.202797 CCCATGAGTCAGCGACGG 60.203 66.667 0.00 0.00 37.67 4.79
773 1772 2.887568 GCCCATGAGTCAGCGACG 60.888 66.667 0.00 0.00 37.67 5.12
774 1773 2.512515 GGCCCATGAGTCAGCGAC 60.513 66.667 0.00 1.15 0.00 5.19
775 1774 3.785859 GGGCCCATGAGTCAGCGA 61.786 66.667 19.95 0.00 0.00 4.93
777 1776 3.785859 TCGGGCCCATGAGTCAGC 61.786 66.667 24.92 0.00 0.00 4.26
778 1777 2.187946 GTCGGGCCCATGAGTCAG 59.812 66.667 24.92 1.98 0.00 3.51
779 1778 2.284625 AGTCGGGCCCATGAGTCA 60.285 61.111 24.92 0.00 0.00 3.41
780 1779 1.899437 TTCAGTCGGGCCCATGAGTC 61.899 60.000 24.92 2.74 0.00 3.36
781 1780 1.488705 TTTCAGTCGGGCCCATGAGT 61.489 55.000 24.92 12.20 0.00 3.41
782 1781 1.026718 GTTTCAGTCGGGCCCATGAG 61.027 60.000 24.92 8.91 0.00 2.90
783 1782 1.002624 GTTTCAGTCGGGCCCATGA 60.003 57.895 24.92 19.54 0.00 3.07
784 1783 0.609131 AAGTTTCAGTCGGGCCCATG 60.609 55.000 24.92 17.36 0.00 3.66
785 1784 0.609131 CAAGTTTCAGTCGGGCCCAT 60.609 55.000 24.92 3.43 0.00 4.00
786 1785 1.228124 CAAGTTTCAGTCGGGCCCA 60.228 57.895 24.92 6.15 0.00 5.36
787 1786 1.072505 TCAAGTTTCAGTCGGGCCC 59.927 57.895 13.57 13.57 0.00 5.80
788 1787 1.235281 GGTCAAGTTTCAGTCGGGCC 61.235 60.000 0.00 0.00 0.00 5.80
789 1788 1.235281 GGGTCAAGTTTCAGTCGGGC 61.235 60.000 0.00 0.00 0.00 6.13
790 1789 0.107831 TGGGTCAAGTTTCAGTCGGG 59.892 55.000 0.00 0.00 0.00 5.14
791 1790 1.226746 GTGGGTCAAGTTTCAGTCGG 58.773 55.000 0.00 0.00 0.00 4.79
792 1791 1.202651 AGGTGGGTCAAGTTTCAGTCG 60.203 52.381 0.00 0.00 0.00 4.18
793 1792 2.222027 CAGGTGGGTCAAGTTTCAGTC 58.778 52.381 0.00 0.00 0.00 3.51
794 1793 1.564348 ACAGGTGGGTCAAGTTTCAGT 59.436 47.619 0.00 0.00 0.00 3.41
795 1794 2.222027 GACAGGTGGGTCAAGTTTCAG 58.778 52.381 0.00 0.00 37.73 3.02
796 1795 1.562008 TGACAGGTGGGTCAAGTTTCA 59.438 47.619 0.00 0.00 44.34 2.69
797 1796 2.222027 CTGACAGGTGGGTCAAGTTTC 58.778 52.381 0.00 0.00 46.36 2.78
798 1797 1.564348 ACTGACAGGTGGGTCAAGTTT 59.436 47.619 7.51 0.00 46.36 2.66
799 1798 1.134098 CACTGACAGGTGGGTCAAGTT 60.134 52.381 7.51 0.00 46.36 2.66
800 1799 0.469917 CACTGACAGGTGGGTCAAGT 59.530 55.000 7.51 0.00 46.36 3.16
801 1800 3.312404 CACTGACAGGTGGGTCAAG 57.688 57.895 7.51 0.00 46.36 3.02
808 1807 0.670546 CGTTAGGCCACTGACAGGTG 60.671 60.000 5.01 2.99 33.11 4.00
809 1808 1.671742 CGTTAGGCCACTGACAGGT 59.328 57.895 5.01 0.00 33.11 4.00
810 1809 1.079127 CCGTTAGGCCACTGACAGG 60.079 63.158 5.01 0.00 33.11 4.00
811 1810 4.598257 CCGTTAGGCCACTGACAG 57.402 61.111 5.01 0.00 33.11 3.51
831 1830 4.849329 CCTCTGACGTACGGCGCC 62.849 72.222 19.07 19.07 46.11 6.53
832 1831 3.736482 CTCCTCTGACGTACGGCGC 62.736 68.421 21.06 0.00 46.11 6.53
834 1833 1.935327 AAGCTCCTCTGACGTACGGC 61.935 60.000 21.06 18.72 0.00 5.68
835 1834 0.099082 GAAGCTCCTCTGACGTACGG 59.901 60.000 21.06 1.50 0.00 4.02
836 1835 0.099082 GGAAGCTCCTCTGACGTACG 59.901 60.000 15.01 15.01 32.53 3.67
837 1836 1.465794 AGGAAGCTCCTCTGACGTAC 58.534 55.000 0.00 0.00 45.66 3.67
838 1837 3.981051 AGGAAGCTCCTCTGACGTA 57.019 52.632 0.00 0.00 45.66 3.57
839 1838 4.854587 AGGAAGCTCCTCTGACGT 57.145 55.556 0.00 0.00 45.66 4.34
847 1846 1.281925 TGGGATTGGGAGGAAGCTCC 61.282 60.000 0.00 0.00 42.62 4.70
848 1847 0.182299 CTGGGATTGGGAGGAAGCTC 59.818 60.000 0.00 0.00 0.00 4.09
849 1848 0.551131 ACTGGGATTGGGAGGAAGCT 60.551 55.000 0.00 0.00 0.00 3.74
850 1849 0.394899 CACTGGGATTGGGAGGAAGC 60.395 60.000 0.00 0.00 0.00 3.86
851 1850 0.257039 CCACTGGGATTGGGAGGAAG 59.743 60.000 0.00 0.00 35.59 3.46
852 1851 1.863155 GCCACTGGGATTGGGAGGAA 61.863 60.000 0.00 0.00 35.59 3.36
853 1852 2.308722 GCCACTGGGATTGGGAGGA 61.309 63.158 0.00 0.00 35.59 3.71
854 1853 2.276309 GAGCCACTGGGATTGGGAGG 62.276 65.000 0.00 0.00 35.59 4.30
855 1854 1.225704 GAGCCACTGGGATTGGGAG 59.774 63.158 0.00 0.00 35.59 4.30
856 1855 2.669133 CGAGCCACTGGGATTGGGA 61.669 63.158 0.00 0.00 35.59 4.37
857 1856 2.124570 CGAGCCACTGGGATTGGG 60.125 66.667 0.00 0.00 35.59 4.12
858 1857 2.825836 GCGAGCCACTGGGATTGG 60.826 66.667 0.00 0.00 34.33 3.16
859 1858 2.825836 GGCGAGCCACTGGGATTG 60.826 66.667 9.58 0.00 37.01 2.67
860 1859 4.115199 GGGCGAGCCACTGGGATT 62.115 66.667 16.65 0.00 37.98 3.01
917 1932 1.847506 CGGATGGGATGGGATGGGA 60.848 63.158 0.00 0.00 0.00 4.37
921 1936 1.763770 GAAGCGGATGGGATGGGAT 59.236 57.895 0.00 0.00 0.00 3.85
922 1937 2.807107 CGAAGCGGATGGGATGGGA 61.807 63.158 0.00 0.00 0.00 4.37
1185 2201 2.628657 CCCCAATCAAAACAACCCGTAA 59.371 45.455 0.00 0.00 0.00 3.18
1188 2204 0.320050 CCCCCAATCAAAACAACCCG 59.680 55.000 0.00 0.00 0.00 5.28
1194 2210 3.386402 TCTGAAACACCCCCAATCAAAAC 59.614 43.478 0.00 0.00 0.00 2.43
1201 2217 1.152830 GCCTCTGAAACACCCCCAA 59.847 57.895 0.00 0.00 0.00 4.12
1259 2275 0.109153 TGATTGCACTCACCAGCAGT 59.891 50.000 2.07 0.00 42.39 4.40
1271 2287 1.428912 ACCTTCTTCCCCTTGATTGCA 59.571 47.619 0.00 0.00 0.00 4.08
1478 2495 2.675032 CGCTCTGTCCAGTTGCATCTTA 60.675 50.000 0.00 0.00 0.00 2.10
1507 2524 9.131791 ACTGAAACCATAACAACTTCAAGTAAT 57.868 29.630 0.00 0.00 0.00 1.89
1534 2551 9.028284 TCTATGAATTTCTCAGGCTCAATTTTT 57.972 29.630 0.00 0.00 37.52 1.94
1561 2578 6.149474 ACAACCATGTCTTATCTTGTTGTAGC 59.851 38.462 8.84 0.00 33.41 3.58
1565 2582 8.567948 AGTTTACAACCATGTCTTATCTTGTTG 58.432 33.333 0.00 0.00 41.05 3.33
1659 2676 6.820335 TCTACATTGTGCAGATAGTTATGCT 58.180 36.000 0.00 0.00 42.98 3.79
1762 2783 1.406539 CTGCTGTCCAACAACTTGCTT 59.593 47.619 0.00 0.00 0.00 3.91
1822 2867 0.100325 CAGCCTAGCTCACTGTCTCG 59.900 60.000 0.00 0.00 36.40 4.04
1867 2912 1.751437 ATAGCCCAACGAAAAGGAGC 58.249 50.000 0.00 0.00 0.00 4.70
1898 2943 1.815613 GAAGGGCTCTCTTTTCTTGGC 59.184 52.381 0.00 0.00 0.00 4.52
2382 3428 2.819608 TCCTCGCAGCAAATTTAAAGCT 59.180 40.909 0.00 0.00 39.63 3.74
2409 3455 5.127194 TGCCTGACCACTAAAGAGTATACTG 59.873 44.000 10.90 0.00 33.32 2.74
2421 3467 1.595311 ATTCCCATGCCTGACCACTA 58.405 50.000 0.00 0.00 0.00 2.74
2424 3470 1.076841 TCAAATTCCCATGCCTGACCA 59.923 47.619 0.00 0.00 0.00 4.02
2520 3566 4.096382 TCACACTTTGAAGAAGAAAGGTGC 59.904 41.667 0.00 0.00 34.72 5.01
2704 3750 4.340381 GGAGTAGCAATGAAGCCATGAAAT 59.660 41.667 0.00 0.00 32.36 2.17
2802 3848 3.526534 GAGAAGGTGACACTCTATTGGC 58.473 50.000 5.39 0.00 34.65 4.52
2803 3849 3.515502 TGGAGAAGGTGACACTCTATTGG 59.484 47.826 5.39 0.00 36.65 3.16
2804 3850 4.808414 TGGAGAAGGTGACACTCTATTG 57.192 45.455 5.39 0.00 36.65 1.90
2805 3851 4.163078 CCATGGAGAAGGTGACACTCTATT 59.837 45.833 5.56 0.00 36.02 1.73
2807 3853 3.099905 CCATGGAGAAGGTGACACTCTA 58.900 50.000 5.56 0.00 36.65 2.43
2808 3854 1.905215 CCATGGAGAAGGTGACACTCT 59.095 52.381 5.56 1.00 36.65 3.24
2809 3855 1.677217 GCCATGGAGAAGGTGACACTC 60.677 57.143 18.40 0.00 36.01 3.51
2810 3856 0.326264 GCCATGGAGAAGGTGACACT 59.674 55.000 18.40 0.00 0.00 3.55
2811 3857 0.036732 TGCCATGGAGAAGGTGACAC 59.963 55.000 18.40 0.00 0.00 3.67
2813 3859 2.134789 ATTGCCATGGAGAAGGTGAC 57.865 50.000 18.40 0.00 0.00 3.67
2814 3860 2.173356 CCTATTGCCATGGAGAAGGTGA 59.827 50.000 18.40 0.00 0.00 4.02
2815 3861 2.579873 CCTATTGCCATGGAGAAGGTG 58.420 52.381 18.40 0.00 0.00 4.00
2816 3862 1.133668 GCCTATTGCCATGGAGAAGGT 60.134 52.381 18.40 0.00 0.00 3.50
2817 3863 1.144503 AGCCTATTGCCATGGAGAAGG 59.855 52.381 18.40 16.28 42.71 3.46
2821 3867 2.508526 GGTAAGCCTATTGCCATGGAG 58.491 52.381 18.40 3.14 42.71 3.86
2822 3868 1.202758 CGGTAAGCCTATTGCCATGGA 60.203 52.381 18.40 0.00 42.71 3.41
2823 3869 1.202758 TCGGTAAGCCTATTGCCATGG 60.203 52.381 7.63 7.63 42.71 3.66
2824 3870 2.146342 CTCGGTAAGCCTATTGCCATG 58.854 52.381 0.00 0.00 42.71 3.66
2825 3871 2.037772 CTCTCGGTAAGCCTATTGCCAT 59.962 50.000 0.00 0.00 42.71 4.40
2826 3872 1.412710 CTCTCGGTAAGCCTATTGCCA 59.587 52.381 0.00 0.00 42.71 4.92
2827 3873 1.413077 ACTCTCGGTAAGCCTATTGCC 59.587 52.381 0.00 0.00 42.71 4.52
2828 3874 2.362717 AGACTCTCGGTAAGCCTATTGC 59.637 50.000 0.00 0.00 41.71 3.56
2829 3875 4.657436 AAGACTCTCGGTAAGCCTATTG 57.343 45.455 0.00 0.00 0.00 1.90
2830 3876 5.302313 CCTAAAGACTCTCGGTAAGCCTATT 59.698 44.000 0.00 0.00 0.00 1.73
2831 3877 4.828387 CCTAAAGACTCTCGGTAAGCCTAT 59.172 45.833 0.00 0.00 0.00 2.57
2833 3879 3.025262 CCTAAAGACTCTCGGTAAGCCT 58.975 50.000 0.00 0.00 0.00 4.58
2834 3880 2.481622 GCCTAAAGACTCTCGGTAAGCC 60.482 54.545 0.00 0.00 0.00 4.35
2835 3881 2.427812 AGCCTAAAGACTCTCGGTAAGC 59.572 50.000 0.00 0.00 0.00 3.09
2839 3885 5.163174 ACTCTATAGCCTAAAGACTCTCGGT 60.163 44.000 0.00 0.00 0.00 4.69
2841 3887 6.483974 TGAACTCTATAGCCTAAAGACTCTCG 59.516 42.308 0.00 0.00 0.00 4.04
2846 3892 8.856103 AGAAGATGAACTCTATAGCCTAAAGAC 58.144 37.037 0.00 0.00 32.41 3.01
2848 3894 8.303876 GGAGAAGATGAACTCTATAGCCTAAAG 58.696 40.741 0.00 0.00 32.41 1.85
2849 3895 7.785028 TGGAGAAGATGAACTCTATAGCCTAAA 59.215 37.037 0.00 0.00 32.41 1.85
2850 3896 7.298374 TGGAGAAGATGAACTCTATAGCCTAA 58.702 38.462 0.00 0.00 32.41 2.69
2851 3897 6.853490 TGGAGAAGATGAACTCTATAGCCTA 58.147 40.000 0.00 0.00 32.41 3.93
2852 3898 5.710646 TGGAGAAGATGAACTCTATAGCCT 58.289 41.667 0.00 0.00 32.41 4.58
2853 3899 6.397272 CATGGAGAAGATGAACTCTATAGCC 58.603 44.000 0.00 0.00 33.75 3.93
2854 3900 6.397272 CCATGGAGAAGATGAACTCTATAGC 58.603 44.000 5.56 0.00 33.75 2.97
2855 3901 6.014755 TGCCATGGAGAAGATGAACTCTATAG 60.015 42.308 18.40 0.00 33.75 1.31
2856 3902 5.840693 TGCCATGGAGAAGATGAACTCTATA 59.159 40.000 18.40 0.00 33.75 1.31
2857 3903 4.657504 TGCCATGGAGAAGATGAACTCTAT 59.342 41.667 18.40 0.00 35.36 1.98
2858 3904 4.033009 TGCCATGGAGAAGATGAACTCTA 58.967 43.478 18.40 0.00 32.41 2.43
2859 3905 2.842496 TGCCATGGAGAAGATGAACTCT 59.158 45.455 18.40 0.00 34.96 3.24
2860 3906 3.272574 TGCCATGGAGAAGATGAACTC 57.727 47.619 18.40 0.00 0.00 3.01
2861 3907 3.726557 TTGCCATGGAGAAGATGAACT 57.273 42.857 18.40 0.00 0.00 3.01
2862 3908 4.518211 CCTATTGCCATGGAGAAGATGAAC 59.482 45.833 18.40 0.00 0.00 3.18
2863 3909 4.722220 CCTATTGCCATGGAGAAGATGAA 58.278 43.478 18.40 0.00 0.00 2.57
2864 3910 3.497405 GCCTATTGCCATGGAGAAGATGA 60.497 47.826 18.40 0.00 0.00 2.92
2865 3911 2.818432 GCCTATTGCCATGGAGAAGATG 59.182 50.000 18.40 2.85 0.00 2.90
2866 3912 2.715336 AGCCTATTGCCATGGAGAAGAT 59.285 45.455 18.40 3.53 42.71 2.40
2867 3913 2.130193 AGCCTATTGCCATGGAGAAGA 58.870 47.619 18.40 3.37 42.71 2.87
2868 3914 2.653234 AGCCTATTGCCATGGAGAAG 57.347 50.000 18.40 6.39 42.71 2.85
2869 3915 3.435026 GGTAAGCCTATTGCCATGGAGAA 60.435 47.826 18.40 7.59 42.71 2.87
2870 3916 2.106511 GGTAAGCCTATTGCCATGGAGA 59.893 50.000 18.40 2.33 42.71 3.71
2871 3917 2.508526 GGTAAGCCTATTGCCATGGAG 58.491 52.381 18.40 3.14 42.71 3.86
2872 3918 1.202758 CGGTAAGCCTATTGCCATGGA 60.203 52.381 18.40 0.00 42.71 3.41
2873 3919 1.202758 TCGGTAAGCCTATTGCCATGG 60.203 52.381 7.63 7.63 42.71 3.66
2874 3920 2.146342 CTCGGTAAGCCTATTGCCATG 58.854 52.381 0.00 0.00 42.71 3.66
2875 3921 2.037772 CTCTCGGTAAGCCTATTGCCAT 59.962 50.000 0.00 0.00 42.71 4.40
2876 3922 1.412710 CTCTCGGTAAGCCTATTGCCA 59.587 52.381 0.00 0.00 42.71 4.92
2877 3923 1.413077 ACTCTCGGTAAGCCTATTGCC 59.587 52.381 0.00 0.00 42.71 4.52
2878 3924 2.362717 AGACTCTCGGTAAGCCTATTGC 59.637 50.000 0.00 0.00 41.71 3.56
2879 3925 4.657436 AAGACTCTCGGTAAGCCTATTG 57.343 45.455 0.00 0.00 0.00 1.90
2880 3926 5.302313 CCTAAAGACTCTCGGTAAGCCTATT 59.698 44.000 0.00 0.00 0.00 1.73
2881 3927 4.828387 CCTAAAGACTCTCGGTAAGCCTAT 59.172 45.833 0.00 0.00 0.00 2.57
2882 3928 4.205587 CCTAAAGACTCTCGGTAAGCCTA 58.794 47.826 0.00 0.00 0.00 3.93
2883 3929 3.025262 CCTAAAGACTCTCGGTAAGCCT 58.975 50.000 0.00 0.00 0.00 4.58
2884 3930 2.481622 GCCTAAAGACTCTCGGTAAGCC 60.482 54.545 0.00 0.00 0.00 4.35
2934 3980 7.773690 GGGAGTATAAAAATACAGAAGAAGCCA 59.226 37.037 0.00 0.00 0.00 4.75
3051 4098 1.401761 TGTGCATCCAATGGCATACC 58.598 50.000 0.00 0.00 42.75 2.73
3057 4104 5.239351 TCTTTGAAAATGTGCATCCAATGG 58.761 37.500 0.00 0.00 0.00 3.16
3067 4114 8.970691 ATATCGGAAAGTTCTTTGAAAATGTG 57.029 30.769 2.38 0.00 0.00 3.21
3635 4691 1.448985 TTGCAATACCGCTGGTTCTC 58.551 50.000 0.00 0.00 37.09 2.87
3720 4776 4.530946 ACTGGGATAGTTTCGAAGGAAGAA 59.469 41.667 0.00 0.00 35.67 2.52
3721 4777 4.081642 CACTGGGATAGTTTCGAAGGAAGA 60.082 45.833 0.00 0.00 37.60 2.87
3722 4778 4.184629 CACTGGGATAGTTTCGAAGGAAG 58.815 47.826 0.00 0.00 37.60 3.46
3839 4898 7.592938 TGCAGTGCTTTGCCATATAATTATAC 58.407 34.615 17.60 0.00 43.43 1.47
4009 5068 6.139169 GTCAATATTATTTTCACAAGAGCGCG 59.861 38.462 0.00 0.00 0.00 6.86
4134 5193 0.471591 AAATTTGGACAGCCTGGGCA 60.472 50.000 14.39 0.00 44.88 5.36
4646 5705 2.336945 TGTGGCTTCCTGCATCTATG 57.663 50.000 0.00 0.00 45.15 2.23
4907 5971 6.879400 AGTTAGGCTTAAGAACAGTATCAGG 58.121 40.000 6.67 0.00 0.00 3.86
5014 7309 0.539051 TTGGCAAACAAACTGTGGGG 59.461 50.000 0.00 0.00 35.79 4.96
5121 7422 4.518211 GGCTAGTCATCAAAAGCTGCATAT 59.482 41.667 1.02 0.00 35.30 1.78
5146 7447 7.979444 TTCTTACTTGGAAACACTGAATAGG 57.021 36.000 0.00 0.00 42.67 2.57
5227 7530 6.472163 CCAACAAAAATATCACCAGCGATAAC 59.528 38.462 0.00 0.00 31.80 1.89
5237 7540 9.556030 GCTAGAAACTACCAACAAAAATATCAC 57.444 33.333 0.00 0.00 0.00 3.06
5242 7545 8.297426 GCTTAGCTAGAAACTACCAACAAAAAT 58.703 33.333 0.00 0.00 0.00 1.82
5261 7564 2.526304 TCACACGAGTTTGCTTAGCT 57.474 45.000 5.60 0.00 0.00 3.32
5339 7642 4.530710 TTTAGTTGTCCGAGTGCATAGT 57.469 40.909 0.00 0.00 0.00 2.12
5340 7643 4.929808 AGTTTTAGTTGTCCGAGTGCATAG 59.070 41.667 0.00 0.00 0.00 2.23
5341 7644 4.688879 CAGTTTTAGTTGTCCGAGTGCATA 59.311 41.667 0.00 0.00 0.00 3.14
5342 7645 3.498397 CAGTTTTAGTTGTCCGAGTGCAT 59.502 43.478 0.00 0.00 0.00 3.96
5343 7646 2.869801 CAGTTTTAGTTGTCCGAGTGCA 59.130 45.455 0.00 0.00 0.00 4.57
5344 7647 2.349532 GCAGTTTTAGTTGTCCGAGTGC 60.350 50.000 0.00 0.00 0.00 4.40
5345 7648 2.223377 GGCAGTTTTAGTTGTCCGAGTG 59.777 50.000 0.00 0.00 0.00 3.51
5346 7649 2.490991 GGCAGTTTTAGTTGTCCGAGT 58.509 47.619 0.00 0.00 0.00 4.18
5347 7650 1.459592 CGGCAGTTTTAGTTGTCCGAG 59.540 52.381 0.00 0.00 36.66 4.63
5348 7651 1.504359 CGGCAGTTTTAGTTGTCCGA 58.496 50.000 0.00 0.00 36.66 4.55
5349 7652 0.110373 GCGGCAGTTTTAGTTGTCCG 60.110 55.000 0.00 0.00 37.19 4.79
5350 7653 1.235724 AGCGGCAGTTTTAGTTGTCC 58.764 50.000 1.45 0.00 0.00 4.02
5351 7654 3.042887 CAAAGCGGCAGTTTTAGTTGTC 58.957 45.455 1.45 0.00 0.00 3.18
5352 7655 2.798145 GCAAAGCGGCAGTTTTAGTTGT 60.798 45.455 1.45 0.00 0.00 3.32
5353 7656 1.786579 GCAAAGCGGCAGTTTTAGTTG 59.213 47.619 1.45 0.00 0.00 3.16
5354 7657 1.681264 AGCAAAGCGGCAGTTTTAGTT 59.319 42.857 1.45 0.00 35.83 2.24
5355 7658 1.266989 GAGCAAAGCGGCAGTTTTAGT 59.733 47.619 1.45 0.00 35.83 2.24
5356 7659 1.537202 AGAGCAAAGCGGCAGTTTTAG 59.463 47.619 1.45 0.00 35.83 1.85
5357 7660 1.604604 AGAGCAAAGCGGCAGTTTTA 58.395 45.000 1.45 0.00 35.83 1.52
5358 7661 0.746659 AAGAGCAAAGCGGCAGTTTT 59.253 45.000 1.45 0.00 35.83 2.43
5359 7662 0.746659 AAAGAGCAAAGCGGCAGTTT 59.253 45.000 1.45 0.00 35.83 2.66
5360 7663 1.537202 CTAAAGAGCAAAGCGGCAGTT 59.463 47.619 1.45 0.00 35.83 3.16
5361 7664 1.160137 CTAAAGAGCAAAGCGGCAGT 58.840 50.000 1.45 0.00 35.83 4.40
5362 7665 1.135859 CACTAAAGAGCAAAGCGGCAG 60.136 52.381 1.45 0.00 35.83 4.85
5363 7666 0.874390 CACTAAAGAGCAAAGCGGCA 59.126 50.000 1.45 0.00 35.83 5.69
5364 7667 0.455126 GCACTAAAGAGCAAAGCGGC 60.455 55.000 0.00 0.00 0.00 6.53
5365 7668 1.135859 CAGCACTAAAGAGCAAAGCGG 60.136 52.381 2.29 0.00 34.00 5.52
5366 7669 1.135859 CCAGCACTAAAGAGCAAAGCG 60.136 52.381 2.29 0.00 34.00 4.68
5367 7670 1.200948 CCCAGCACTAAAGAGCAAAGC 59.799 52.381 2.29 0.00 34.00 3.51
5368 7671 2.783135 TCCCAGCACTAAAGAGCAAAG 58.217 47.619 2.29 0.00 34.00 2.77
5369 7672 2.949177 TCCCAGCACTAAAGAGCAAA 57.051 45.000 2.29 0.00 34.00 3.68
5370 7673 2.305635 TGATCCCAGCACTAAAGAGCAA 59.694 45.455 2.29 0.00 34.00 3.91
5371 7674 1.908619 TGATCCCAGCACTAAAGAGCA 59.091 47.619 2.29 0.00 34.00 4.26
5372 7675 2.698855 TGATCCCAGCACTAAAGAGC 57.301 50.000 0.00 0.00 0.00 4.09
5373 7676 9.160496 GAATAATATGATCCCAGCACTAAAGAG 57.840 37.037 0.00 0.00 0.00 2.85
5374 7677 8.103305 GGAATAATATGATCCCAGCACTAAAGA 58.897 37.037 0.00 0.00 0.00 2.52
5375 7678 7.884877 TGGAATAATATGATCCCAGCACTAAAG 59.115 37.037 0.00 0.00 32.01 1.85
5376 7679 7.754624 TGGAATAATATGATCCCAGCACTAAA 58.245 34.615 0.00 0.00 32.01 1.85
5377 7680 7.237471 TCTGGAATAATATGATCCCAGCACTAA 59.763 37.037 0.13 0.00 40.56 2.24
5378 7681 6.730507 TCTGGAATAATATGATCCCAGCACTA 59.269 38.462 0.13 0.00 40.56 2.74
5379 7682 5.549228 TCTGGAATAATATGATCCCAGCACT 59.451 40.000 0.13 0.00 40.56 4.40
5380 7683 5.809001 TCTGGAATAATATGATCCCAGCAC 58.191 41.667 0.13 0.00 40.56 4.40
5381 7684 6.647461 ATCTGGAATAATATGATCCCAGCA 57.353 37.500 0.13 0.00 40.56 4.41
5382 7685 8.027524 TCTATCTGGAATAATATGATCCCAGC 57.972 38.462 0.13 0.00 40.56 4.85
5394 7697 9.218525 AGATTCCTCTGTTTCTATCTGGAATAA 57.781 33.333 0.00 0.00 41.24 1.40
5395 7698 8.789767 AGATTCCTCTGTTTCTATCTGGAATA 57.210 34.615 0.00 0.00 41.24 1.75
5396 7699 7.346698 TGAGATTCCTCTGTTTCTATCTGGAAT 59.653 37.037 0.00 0.00 43.06 3.01
5397 7700 6.669591 TGAGATTCCTCTGTTTCTATCTGGAA 59.330 38.462 0.00 0.00 40.10 3.53
5398 7701 6.197903 TGAGATTCCTCTGTTTCTATCTGGA 58.802 40.000 0.00 0.00 40.10 3.86
5399 7702 6.098124 ACTGAGATTCCTCTGTTTCTATCTGG 59.902 42.308 0.00 0.00 45.50 3.86
5400 7703 6.979817 CACTGAGATTCCTCTGTTTCTATCTG 59.020 42.308 0.00 0.00 45.50 2.90
5401 7704 6.667414 ACACTGAGATTCCTCTGTTTCTATCT 59.333 38.462 0.00 0.00 45.50 1.98
5402 7705 6.872920 ACACTGAGATTCCTCTGTTTCTATC 58.127 40.000 0.00 0.00 45.50 2.08
5403 7706 6.865834 ACACTGAGATTCCTCTGTTTCTAT 57.134 37.500 0.00 0.00 45.50 1.98
5404 7707 6.672266 AACACTGAGATTCCTCTGTTTCTA 57.328 37.500 0.00 0.00 45.50 2.10
5405 7708 5.559148 AACACTGAGATTCCTCTGTTTCT 57.441 39.130 0.00 0.00 45.50 2.52
5406 7709 5.760253 TCAAACACTGAGATTCCTCTGTTTC 59.240 40.000 8.76 0.00 45.50 2.78
5407 7710 5.684704 TCAAACACTGAGATTCCTCTGTTT 58.315 37.500 0.00 0.00 45.50 2.83
5408 7711 5.296151 TCAAACACTGAGATTCCTCTGTT 57.704 39.130 0.00 0.00 45.50 3.16
5410 7713 5.350914 GTCATCAAACACTGAGATTCCTCTG 59.649 44.000 0.00 0.00 42.12 3.35
5411 7714 5.012458 TGTCATCAAACACTGAGATTCCTCT 59.988 40.000 0.00 0.00 40.10 3.69
5412 7715 5.240891 TGTCATCAAACACTGAGATTCCTC 58.759 41.667 0.00 0.00 37.52 3.71
5413 7716 5.233083 TGTCATCAAACACTGAGATTCCT 57.767 39.130 0.00 0.00 37.52 3.36
5414 7717 6.373774 AGAATGTCATCAAACACTGAGATTCC 59.626 38.462 14.90 3.04 45.88 3.01
5415 7718 7.375106 AGAATGTCATCAAACACTGAGATTC 57.625 36.000 12.08 12.08 45.45 2.52
5416 7719 8.099537 AGTAGAATGTCATCAAACACTGAGATT 58.900 33.333 0.00 0.00 37.88 2.40
5417 7720 7.619050 AGTAGAATGTCATCAAACACTGAGAT 58.381 34.615 0.00 0.00 37.52 2.75
5418 7721 6.997655 AGTAGAATGTCATCAAACACTGAGA 58.002 36.000 0.00 0.00 37.52 3.27
5419 7722 7.516481 CAAGTAGAATGTCATCAAACACTGAG 58.484 38.462 0.00 0.00 37.52 3.35
5420 7723 6.073058 GCAAGTAGAATGTCATCAAACACTGA 60.073 38.462 0.00 0.00 38.81 3.41
5421 7724 6.072838 AGCAAGTAGAATGTCATCAAACACTG 60.073 38.462 0.00 0.00 30.55 3.66
5422 7725 6.000219 AGCAAGTAGAATGTCATCAAACACT 59.000 36.000 0.00 0.00 30.55 3.55
5423 7726 6.148480 AGAGCAAGTAGAATGTCATCAAACAC 59.852 38.462 0.00 0.00 30.55 3.32
5424 7727 6.148315 CAGAGCAAGTAGAATGTCATCAAACA 59.852 38.462 0.00 0.00 0.00 2.83
5425 7728 6.541086 CAGAGCAAGTAGAATGTCATCAAAC 58.459 40.000 0.00 0.00 0.00 2.93
5426 7729 5.122869 GCAGAGCAAGTAGAATGTCATCAAA 59.877 40.000 0.00 0.00 0.00 2.69
5427 7730 4.633126 GCAGAGCAAGTAGAATGTCATCAA 59.367 41.667 0.00 0.00 0.00 2.57
5428 7731 4.081254 AGCAGAGCAAGTAGAATGTCATCA 60.081 41.667 0.00 0.00 0.00 3.07
5429 7732 4.440880 AGCAGAGCAAGTAGAATGTCATC 58.559 43.478 0.00 0.00 0.00 2.92
5430 7733 4.484537 AGCAGAGCAAGTAGAATGTCAT 57.515 40.909 0.00 0.00 0.00 3.06
5431 7734 3.969287 AGCAGAGCAAGTAGAATGTCA 57.031 42.857 0.00 0.00 0.00 3.58
5432 7735 4.248859 TGAAGCAGAGCAAGTAGAATGTC 58.751 43.478 0.00 0.00 0.00 3.06
5433 7736 4.277515 TGAAGCAGAGCAAGTAGAATGT 57.722 40.909 0.00 0.00 0.00 2.71
5434 7737 5.117584 AGATGAAGCAGAGCAAGTAGAATG 58.882 41.667 0.00 0.00 0.00 2.67
5435 7738 5.356291 AGATGAAGCAGAGCAAGTAGAAT 57.644 39.130 0.00 0.00 0.00 2.40
5436 7739 4.815533 AGATGAAGCAGAGCAAGTAGAA 57.184 40.909 0.00 0.00 0.00 2.10
5437 7740 4.098654 GGTAGATGAAGCAGAGCAAGTAGA 59.901 45.833 0.00 0.00 0.00 2.59
5438 7741 4.142071 TGGTAGATGAAGCAGAGCAAGTAG 60.142 45.833 0.00 0.00 0.00 2.57
5439 7742 3.769300 TGGTAGATGAAGCAGAGCAAGTA 59.231 43.478 0.00 0.00 0.00 2.24
5440 7743 2.568956 TGGTAGATGAAGCAGAGCAAGT 59.431 45.455 0.00 0.00 0.00 3.16
5441 7744 2.935201 GTGGTAGATGAAGCAGAGCAAG 59.065 50.000 0.00 0.00 0.00 4.01
5442 7745 2.675032 CGTGGTAGATGAAGCAGAGCAA 60.675 50.000 0.00 0.00 0.00 3.91
5443 7746 1.134995 CGTGGTAGATGAAGCAGAGCA 60.135 52.381 0.00 0.00 0.00 4.26
5444 7747 1.565305 CGTGGTAGATGAAGCAGAGC 58.435 55.000 0.00 0.00 0.00 4.09
5445 7748 1.202463 CCCGTGGTAGATGAAGCAGAG 60.202 57.143 0.00 0.00 0.00 3.35
5446 7749 0.824109 CCCGTGGTAGATGAAGCAGA 59.176 55.000 0.00 0.00 0.00 4.26
5447 7750 0.824109 TCCCGTGGTAGATGAAGCAG 59.176 55.000 0.00 0.00 0.00 4.24
5448 7751 1.207089 CTTCCCGTGGTAGATGAAGCA 59.793 52.381 0.00 0.00 0.00 3.91
5449 7752 1.207329 ACTTCCCGTGGTAGATGAAGC 59.793 52.381 0.00 0.00 36.71 3.86
5450 7753 3.262420 CAACTTCCCGTGGTAGATGAAG 58.738 50.000 4.09 0.00 38.65 3.02
5451 7754 2.614481 GCAACTTCCCGTGGTAGATGAA 60.614 50.000 9.65 0.00 27.52 2.57
5452 7755 1.066430 GCAACTTCCCGTGGTAGATGA 60.066 52.381 9.65 0.00 27.52 2.92
5453 7756 1.369625 GCAACTTCCCGTGGTAGATG 58.630 55.000 4.09 3.87 0.00 2.90
5454 7757 0.252197 GGCAACTTCCCGTGGTAGAT 59.748 55.000 4.09 0.00 0.00 1.98
5455 7758 1.675219 GGCAACTTCCCGTGGTAGA 59.325 57.895 4.09 0.00 0.00 2.59
5456 7759 4.296265 GGCAACTTCCCGTGGTAG 57.704 61.111 0.00 0.00 0.00 3.18
5468 7771 2.557924 TGATCACAATGTCCAAGGCAAC 59.442 45.455 0.00 0.00 0.00 4.17
5469 7772 2.874014 TGATCACAATGTCCAAGGCAA 58.126 42.857 0.00 0.00 0.00 4.52
5470 7773 2.583024 TGATCACAATGTCCAAGGCA 57.417 45.000 0.00 0.00 0.00 4.75
5471 7774 2.100252 CCATGATCACAATGTCCAAGGC 59.900 50.000 0.00 0.00 0.00 4.35
5472 7775 3.623703 TCCATGATCACAATGTCCAAGG 58.376 45.455 0.00 0.00 0.00 3.61
5473 7776 5.588240 CATTCCATGATCACAATGTCCAAG 58.412 41.667 0.00 0.00 0.00 3.61
5474 7777 4.142116 GCATTCCATGATCACAATGTCCAA 60.142 41.667 18.40 1.71 0.00 3.53
5475 7778 3.382227 GCATTCCATGATCACAATGTCCA 59.618 43.478 18.40 0.00 0.00 4.02
5476 7779 3.635373 AGCATTCCATGATCACAATGTCC 59.365 43.478 18.40 8.46 0.00 4.02
5477 7780 4.499188 CCAGCATTCCATGATCACAATGTC 60.499 45.833 18.40 13.24 0.00 3.06
5478 7781 3.383505 CCAGCATTCCATGATCACAATGT 59.616 43.478 18.40 8.34 0.00 2.71
5479 7782 3.243737 CCCAGCATTCCATGATCACAATG 60.244 47.826 15.14 15.14 0.00 2.82
5480 7783 2.963101 CCCAGCATTCCATGATCACAAT 59.037 45.455 0.00 0.00 0.00 2.71
5481 7784 2.380941 CCCAGCATTCCATGATCACAA 58.619 47.619 0.00 0.00 0.00 3.33
5482 7785 1.410507 CCCCAGCATTCCATGATCACA 60.411 52.381 0.00 0.00 0.00 3.58
5483 7786 1.325355 CCCCAGCATTCCATGATCAC 58.675 55.000 0.00 0.00 0.00 3.06
5484 7787 0.928505 ACCCCAGCATTCCATGATCA 59.071 50.000 0.00 0.00 0.00 2.92
5485 7788 1.325355 CACCCCAGCATTCCATGATC 58.675 55.000 0.00 0.00 0.00 2.92
5486 7789 0.632835 ACACCCCAGCATTCCATGAT 59.367 50.000 0.00 0.00 0.00 2.45
5487 7790 0.034186 GACACCCCAGCATTCCATGA 60.034 55.000 0.00 0.00 0.00 3.07
5488 7791 0.033796 AGACACCCCAGCATTCCATG 60.034 55.000 0.00 0.00 0.00 3.66
5489 7792 0.033796 CAGACACCCCAGCATTCCAT 60.034 55.000 0.00 0.00 0.00 3.41
5490 7793 1.379916 CAGACACCCCAGCATTCCA 59.620 57.895 0.00 0.00 0.00 3.53
5491 7794 1.379044 CCAGACACCCCAGCATTCC 60.379 63.158 0.00 0.00 0.00 3.01
5492 7795 0.678048 GACCAGACACCCCAGCATTC 60.678 60.000 0.00 0.00 0.00 2.67
5493 7796 1.136329 AGACCAGACACCCCAGCATT 61.136 55.000 0.00 0.00 0.00 3.56
5494 7797 0.252696 TAGACCAGACACCCCAGCAT 60.253 55.000 0.00 0.00 0.00 3.79
5495 7798 1.157513 TAGACCAGACACCCCAGCA 59.842 57.895 0.00 0.00 0.00 4.41
5496 7799 0.905337 AGTAGACCAGACACCCCAGC 60.905 60.000 0.00 0.00 0.00 4.85
5497 7800 2.025226 TCTAGTAGACCAGACACCCCAG 60.025 54.545 0.00 0.00 0.00 4.45
5498 7801 1.997791 TCTAGTAGACCAGACACCCCA 59.002 52.381 0.00 0.00 0.00 4.96
5499 7802 2.822707 TCTAGTAGACCAGACACCCC 57.177 55.000 0.00 0.00 0.00 4.95
5500 7803 4.710375 TCATTTCTAGTAGACCAGACACCC 59.290 45.833 0.00 0.00 0.00 4.61
5501 7804 5.916661 TCATTTCTAGTAGACCAGACACC 57.083 43.478 0.00 0.00 0.00 4.16
5502 7805 8.904834 TCTTATCATTTCTAGTAGACCAGACAC 58.095 37.037 0.00 0.00 0.00 3.67
5503 7806 9.647918 ATCTTATCATTTCTAGTAGACCAGACA 57.352 33.333 0.00 0.00 0.00 3.41
5515 7818 9.539825 GCAGACTTGAAGATCTTATCATTTCTA 57.460 33.333 8.25 0.00 0.00 2.10
5516 7819 8.266473 AGCAGACTTGAAGATCTTATCATTTCT 58.734 33.333 8.25 5.40 0.00 2.52
5517 7820 8.436046 AGCAGACTTGAAGATCTTATCATTTC 57.564 34.615 8.25 3.27 0.00 2.17
5518 7821 9.323985 GTAGCAGACTTGAAGATCTTATCATTT 57.676 33.333 8.25 0.00 0.00 2.32
5519 7822 8.703743 AGTAGCAGACTTGAAGATCTTATCATT 58.296 33.333 8.25 0.00 33.13 2.57
5520 7823 8.248904 AGTAGCAGACTTGAAGATCTTATCAT 57.751 34.615 8.25 0.00 33.13 2.45
5521 7824 7.201866 GGAGTAGCAGACTTGAAGATCTTATCA 60.202 40.741 8.25 0.00 39.06 2.15
5522 7825 7.014230 AGGAGTAGCAGACTTGAAGATCTTATC 59.986 40.741 8.25 4.34 39.06 1.75
5523 7826 6.838612 AGGAGTAGCAGACTTGAAGATCTTAT 59.161 38.462 8.25 0.00 39.06 1.73
5524 7827 6.191315 AGGAGTAGCAGACTTGAAGATCTTA 58.809 40.000 8.25 0.00 39.06 2.10
5525 7828 5.022787 AGGAGTAGCAGACTTGAAGATCTT 58.977 41.667 7.95 7.95 39.06 2.40
5526 7829 4.609301 AGGAGTAGCAGACTTGAAGATCT 58.391 43.478 0.00 0.00 39.06 2.75
5527 7830 4.400884 TGAGGAGTAGCAGACTTGAAGATC 59.599 45.833 0.00 0.00 39.06 2.75
5528 7831 4.159506 GTGAGGAGTAGCAGACTTGAAGAT 59.840 45.833 0.00 0.00 39.06 2.40
5529 7832 3.508012 GTGAGGAGTAGCAGACTTGAAGA 59.492 47.826 0.00 0.00 39.06 2.87
5530 7833 3.256879 TGTGAGGAGTAGCAGACTTGAAG 59.743 47.826 0.00 0.00 39.06 3.02
5531 7834 3.230976 TGTGAGGAGTAGCAGACTTGAA 58.769 45.455 0.00 0.00 39.06 2.69
5532 7835 2.876581 TGTGAGGAGTAGCAGACTTGA 58.123 47.619 0.00 0.00 39.06 3.02
5533 7836 3.883830 ATGTGAGGAGTAGCAGACTTG 57.116 47.619 0.00 0.00 39.06 3.16
5534 7837 3.196685 GGAATGTGAGGAGTAGCAGACTT 59.803 47.826 0.00 0.00 39.06 3.01
5535 7838 2.763448 GGAATGTGAGGAGTAGCAGACT 59.237 50.000 0.00 0.00 42.90 3.24
5536 7839 2.763448 AGGAATGTGAGGAGTAGCAGAC 59.237 50.000 0.00 0.00 0.00 3.51
5537 7840 2.762887 CAGGAATGTGAGGAGTAGCAGA 59.237 50.000 0.00 0.00 0.00 4.26
5538 7841 2.158986 CCAGGAATGTGAGGAGTAGCAG 60.159 54.545 0.00 0.00 0.00 4.24
5539 7842 1.833630 CCAGGAATGTGAGGAGTAGCA 59.166 52.381 0.00 0.00 0.00 3.49
5540 7843 2.111384 TCCAGGAATGTGAGGAGTAGC 58.889 52.381 0.00 0.00 0.00 3.58
5541 7844 3.070734 CCATCCAGGAATGTGAGGAGTAG 59.929 52.174 0.00 0.00 41.22 2.57
5542 7845 3.041211 CCATCCAGGAATGTGAGGAGTA 58.959 50.000 0.00 0.00 41.22 2.59
5543 7846 1.842562 CCATCCAGGAATGTGAGGAGT 59.157 52.381 0.00 0.00 41.22 3.85
5544 7847 2.121948 TCCATCCAGGAATGTGAGGAG 58.878 52.381 0.00 0.00 45.65 3.69
5545 7848 2.268796 TCCATCCAGGAATGTGAGGA 57.731 50.000 0.00 0.00 45.65 3.71
5555 7858 3.209410 GCAAGTAGTGAATCCATCCAGG 58.791 50.000 0.00 0.00 39.47 4.45
5556 7859 3.877559 TGCAAGTAGTGAATCCATCCAG 58.122 45.455 0.00 0.00 0.00 3.86
5557 7860 3.998913 TGCAAGTAGTGAATCCATCCA 57.001 42.857 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.