Multiple sequence alignment - TraesCS4B01G165800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G165800 chr4B 100.000 9016 0 0 1 9016 351869763 351878778 0.000000e+00 16650.0
1 TraesCS4B01G165800 chr4B 100.000 58 0 0 5099 5156 351874804 351874861 3.440000e-19 108.0
2 TraesCS4B01G165800 chr4B 100.000 58 0 0 5042 5099 351874861 351874918 3.440000e-19 108.0
3 TraesCS4B01G165800 chr4A 92.926 3916 170 35 1009 4856 344028886 344032762 0.000000e+00 5598.0
4 TraesCS4B01G165800 chr4A 96.195 2917 90 11 5338 8246 344032912 344035815 0.000000e+00 4752.0
5 TraesCS4B01G165800 chr4A 91.667 204 8 3 706 906 344028274 344028471 3.210000e-69 274.0
6 TraesCS4B01G165800 chr4A 85.448 268 26 10 8317 8574 344035895 344036159 5.370000e-67 267.0
7 TraesCS4B01G165800 chr4A 96.250 160 3 2 5099 5256 344032755 344032913 8.980000e-65 259.0
8 TraesCS4B01G165800 chr4A 86.822 129 13 4 3170 3296 26680317 26680443 3.390000e-29 141.0
9 TraesCS4B01G165800 chr4A 85.586 111 13 2 3187 3297 679630707 679630600 7.400000e-21 113.0
10 TraesCS4B01G165800 chr4A 100.000 55 0 0 5042 5096 344032755 344032809 1.600000e-17 102.0
11 TraesCS4B01G165800 chr4D 95.000 3540 118 20 1362 4851 256549971 256553501 0.000000e+00 5502.0
12 TraesCS4B01G165800 chr4D 94.160 3647 113 47 5338 8936 256553654 256557248 0.000000e+00 5463.0
13 TraesCS4B01G165800 chr4D 95.840 649 17 4 706 1351 256549184 256549825 0.000000e+00 1040.0
14 TraesCS4B01G165800 chr4D 96.711 152 5 0 5105 5256 256553504 256553655 4.180000e-63 254.0
15 TraesCS4B01G165800 chr4D 88.034 117 11 3 3187 3303 105222855 105222742 1.580000e-27 135.0
16 TraesCS4B01G165800 chr4D 97.959 49 1 0 5048 5096 256553504 256553552 1.610000e-12 86.1
17 TraesCS4B01G165800 chr5D 91.336 554 23 12 180 708 394160584 394161137 0.000000e+00 734.0
18 TraesCS4B01G165800 chr5D 88.448 554 29 13 180 708 387715474 387714931 3.550000e-178 636.0
19 TraesCS4B01G165800 chr5D 95.522 134 4 1 1 132 394160458 394160591 7.090000e-51 213.0
20 TraesCS4B01G165800 chr5D 94.776 134 5 1 1 132 387715600 387715467 3.300000e-49 207.0
21 TraesCS4B01G165800 chr2A 93.317 419 28 0 31 449 768206946 768206528 3.580000e-173 619.0
22 TraesCS4B01G165800 chr2A 92.473 279 8 3 442 710 768206495 768206220 3.950000e-103 387.0
23 TraesCS4B01G165800 chr2A 76.510 447 59 21 307 710 163690979 163691422 1.530000e-47 202.0
24 TraesCS4B01G165800 chr2A 75.778 450 63 18 307 713 626901341 626900895 1.550000e-42 185.0
25 TraesCS4B01G165800 chr2A 75.333 450 65 19 307 713 626961311 626960865 3.350000e-39 174.0
26 TraesCS4B01G165800 chr2A 83.838 99 14 2 8631 8728 83644809 83644906 9.640000e-15 93.5
27 TraesCS4B01G165800 chr2A 81.301 123 11 6 8657 8771 707262501 707262383 1.250000e-13 89.8
28 TraesCS4B01G165800 chr2A 83.505 97 9 5 8633 8728 520623432 520623522 5.800000e-12 84.2
29 TraesCS4B01G165800 chr2A 100.000 30 0 0 8934 8963 163663839 163663868 1.000000e-03 56.5
30 TraesCS4B01G165800 chr6B 98.030 203 2 2 4850 5051 259289857 259290058 1.440000e-92 351.0
31 TraesCS4B01G165800 chr2B 100.000 187 0 0 4855 5041 367730890 367730704 6.700000e-91 346.0
32 TraesCS4B01G165800 chr2B 94.737 95 4 1 5254 5347 435504956 435504862 7.290000e-31 147.0
33 TraesCS4B01G165800 chr2B 84.694 98 12 3 8633 8728 27731142 27731046 2.680000e-15 95.3
34 TraesCS4B01G165800 chr2B 82.609 92 8 7 8637 8728 109773215 109773132 3.490000e-09 75.0
35 TraesCS4B01G165800 chr1B 98.469 196 3 0 4854 5049 529506904 529506709 6.700000e-91 346.0
36 TraesCS4B01G165800 chr1B 100.000 185 0 0 4857 5041 80963832 80964016 8.670000e-90 342.0
37 TraesCS4B01G165800 chr1B 95.833 96 2 2 5252 5347 436383663 436383756 4.360000e-33 154.0
38 TraesCS4B01G165800 chr1B 80.000 215 36 6 3087 3296 320949406 320949618 1.570000e-32 152.0
39 TraesCS4B01G165800 chr3A 100.000 186 0 0 4857 5042 75962043 75962228 2.410000e-90 344.0
40 TraesCS4B01G165800 chr3A 100.000 186 0 0 4856 5041 329511724 329511539 2.410000e-90 344.0
41 TraesCS4B01G165800 chr3A 88.793 116 11 2 3187 3302 712231849 712231736 3.390000e-29 141.0
42 TraesCS4B01G165800 chr3A 97.368 38 1 0 8498 8535 523315446 523315409 2.100000e-06 65.8
43 TraesCS4B01G165800 chr7B 100.000 185 0 0 4857 5041 51073645 51073829 8.670000e-90 342.0
44 TraesCS4B01G165800 chr7B 92.683 41 2 1 558 598 458519077 458519038 3.520000e-04 58.4
45 TraesCS4B01G165800 chr1A 100.000 185 0 0 4857 5041 97954912 97955096 8.670000e-90 342.0
46 TraesCS4B01G165800 chr5B 96.585 205 6 1 4854 5057 144591458 144591254 1.120000e-88 339.0
47 TraesCS4B01G165800 chr5B 89.381 113 9 2 5235 5346 419761828 419761938 1.220000e-28 139.0
48 TraesCS4B01G165800 chr6D 96.078 102 3 1 5247 5347 95294997 95294896 2.010000e-36 165.0
49 TraesCS4B01G165800 chr6D 96.512 86 3 0 5254 5339 78083164 78083079 9.440000e-30 143.0
50 TraesCS4B01G165800 chr2D 80.645 217 34 8 3087 3298 166152371 166152584 2.610000e-35 161.0
51 TraesCS4B01G165800 chr2D 92.727 110 6 2 5238 5346 325753999 325754107 3.370000e-34 158.0
52 TraesCS4B01G165800 chr2D 94.000 100 6 0 5244 5343 201441664 201441565 1.570000e-32 152.0
53 TraesCS4B01G165800 chr3D 94.845 97 5 0 5243 5339 14297261 14297357 1.570000e-32 152.0
54 TraesCS4B01G165800 chr1D 97.647 85 2 0 5255 5339 321678011 321677927 7.290000e-31 147.0
55 TraesCS4B01G165800 chr1D 88.235 68 7 1 8661 8728 341371387 341371321 7.500000e-11 80.5
56 TraesCS4B01G165800 chr7A 79.426 209 36 6 3093 3296 577686232 577686026 3.390000e-29 141.0
57 TraesCS4B01G165800 chr7A 83.333 150 23 2 558 705 492651649 492651500 4.390000e-28 137.0
58 TraesCS4B01G165800 chr7A 97.500 40 1 0 8689 8728 444356217 444356256 1.620000e-07 69.4
59 TraesCS4B01G165800 chr7D 87.640 89 7 3 8688 8774 569453689 569453775 5.760000e-17 100.0
60 TraesCS4B01G165800 chrUn 100.000 29 0 0 8497 8525 38423862 38423834 5.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G165800 chr4B 351869763 351878778 9015 False 5622.000000 16650 100.000000 1 9016 3 chr4B.!!$F1 9015
1 TraesCS4B01G165800 chr4A 344028274 344036159 7885 False 1875.333333 5598 93.747667 706 8574 6 chr4A.!!$F2 7868
2 TraesCS4B01G165800 chr4D 256549184 256557248 8064 False 2469.020000 5502 95.934000 706 8936 5 chr4D.!!$F1 8230
3 TraesCS4B01G165800 chr5D 394160458 394161137 679 False 473.500000 734 93.429000 1 708 2 chr5D.!!$F1 707
4 TraesCS4B01G165800 chr5D 387714931 387715600 669 True 421.500000 636 91.612000 1 708 2 chr5D.!!$R1 707
5 TraesCS4B01G165800 chr2A 768206220 768206946 726 True 503.000000 619 92.895000 31 710 2 chr2A.!!$R4 679

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
661 768 0.107214 GAATGAGGCCCAATGACGGA 60.107 55.000 0.00 0.0 0.00 4.69 F
1034 1456 0.460284 ACTCAATCGCCGCCTTACTG 60.460 55.000 0.00 0.0 0.00 2.74 F
2298 2889 0.841961 AATGAGCCTGCCTATCAGCA 59.158 50.000 0.00 0.0 41.50 4.41 F
3478 4078 0.323957 AGGAAGTAAGGGCACGTTCC 59.676 55.000 0.00 0.0 37.67 3.62 F
4161 4786 0.398381 TGCTTTGGCCTCAAACCCTT 60.398 50.000 3.32 0.0 37.89 3.95 F
4882 5518 0.108041 TTAAAGGCGTCCCTAAGGCG 60.108 55.000 0.00 0.0 41.90 5.52 F
4947 5583 0.170339 GGAAAATCGACCGCTTTGGG 59.830 55.000 0.00 0.0 44.64 4.12 F
4948 5584 0.456142 GAAAATCGACCGCTTTGGGC 60.456 55.000 0.00 0.0 45.45 5.36 F
5108 5744 1.000506 TGTGCGAGGTACTTCCAGTTC 59.999 52.381 0.00 0.0 41.55 3.01 F
5110 5746 1.272490 TGCGAGGTACTTCCAGTTCAG 59.728 52.381 0.00 0.0 41.55 3.02 F
5111 5747 1.272769 GCGAGGTACTTCCAGTTCAGT 59.727 52.381 0.00 0.0 41.55 3.41 F
5269 5907 1.567649 ACATCTACTACCTCCGTCCCA 59.432 52.381 0.00 0.0 0.00 4.37 F
5270 5908 2.177233 ACATCTACTACCTCCGTCCCAT 59.823 50.000 0.00 0.0 0.00 4.00 F
7268 7913 3.111484 TGGTCTTGTCCCATGTGCTATA 58.889 45.455 0.00 0.0 0.00 1.31 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2392 2987 0.888619 CACTCCAGGTCGCTAGTTCA 59.111 55.000 0.00 0.00 0.00 3.18 R
2988 3585 1.195115 GTCTCAGTGGCACCCTATCA 58.805 55.000 15.27 0.00 0.00 2.15 R
3608 4228 0.598680 GCTATCTGTAGGCACGCCAG 60.599 60.000 11.35 0.00 38.92 4.85 R
4863 5499 0.108041 CGCCTTAGGGACGCCTTTAA 60.108 55.000 0.00 0.00 33.58 1.52 R
5007 5643 1.227176 GACGCCTTACCGCCTTAGG 60.227 63.158 0.00 0.00 37.30 2.69 R
6332 6976 3.130160 GAAAGGCCTCCTGCGCAG 61.130 66.667 30.52 30.52 42.61 5.18 R
6794 7438 7.706179 TCAAACCTTCTTTGCTGATGTAAAAAG 59.294 33.333 0.00 0.00 0.00 2.27 R
7239 7884 2.626785 TGGGACAAGACCAATGGAGTA 58.373 47.619 6.16 0.00 34.44 2.59 R
7558 8206 8.508875 GTTACTCCCTCGAATGATTTAAAACAA 58.491 33.333 2.00 0.00 0.00 2.83 R
7571 8219 5.426689 TCACTAGTAGTTACTCCCTCGAA 57.573 43.478 0.00 0.00 37.73 3.71 R
7573 8221 7.982761 AATATCACTAGTAGTTACTCCCTCG 57.017 40.000 0.00 0.00 37.73 4.63 R
7645 8293 1.980772 AGCCCAAGCATTCACCTGC 60.981 57.895 0.00 0.00 43.56 4.85 R
7732 8380 7.512130 TCATCAACTTAGCATCCTCATAACAT 58.488 34.615 0.00 0.00 0.00 2.71 R
8619 9305 0.040067 GCTACTTGTTTTGCAGCGCT 60.040 50.000 2.64 2.64 0.00 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 55 5.878332 ACACATAACATCAAATTCAGCGA 57.122 34.783 0.00 0.00 0.00 4.93
53 56 5.872635 ACACATAACATCAAATTCAGCGAG 58.127 37.500 0.00 0.00 0.00 5.03
56 59 5.824624 ACATAACATCAAATTCAGCGAGGAT 59.175 36.000 0.00 0.00 0.00 3.24
65 68 1.123077 TCAGCGAGGATAATGCAGGT 58.877 50.000 0.00 0.00 0.00 4.00
134 191 3.975992 GCATTACTTGCGTCAGGTG 57.024 52.632 5.18 0.00 42.54 4.00
135 192 1.156736 GCATTACTTGCGTCAGGTGT 58.843 50.000 5.18 0.00 42.54 4.16
136 193 1.535462 GCATTACTTGCGTCAGGTGTT 59.465 47.619 5.18 0.00 42.54 3.32
137 194 2.412847 GCATTACTTGCGTCAGGTGTTC 60.413 50.000 5.18 0.00 42.54 3.18
138 195 2.605837 TTACTTGCGTCAGGTGTTCA 57.394 45.000 5.18 0.00 0.00 3.18
139 196 2.605837 TACTTGCGTCAGGTGTTCAA 57.394 45.000 5.18 0.00 0.00 2.69
140 197 1.299541 ACTTGCGTCAGGTGTTCAAG 58.700 50.000 0.00 0.00 39.79 3.02
141 198 1.134521 ACTTGCGTCAGGTGTTCAAGA 60.135 47.619 7.21 0.00 37.96 3.02
142 199 1.939934 CTTGCGTCAGGTGTTCAAGAA 59.060 47.619 0.00 0.00 37.03 2.52
143 200 1.295792 TGCGTCAGGTGTTCAAGAAC 58.704 50.000 6.01 6.01 41.50 3.01
144 201 0.232303 GCGTCAGGTGTTCAAGAACG 59.768 55.000 8.28 0.00 43.94 3.95
145 202 1.847818 CGTCAGGTGTTCAAGAACGA 58.152 50.000 8.28 0.00 43.94 3.85
146 203 1.787155 CGTCAGGTGTTCAAGAACGAG 59.213 52.381 8.28 0.00 43.94 4.18
147 204 1.527311 GTCAGGTGTTCAAGAACGAGC 59.473 52.381 8.28 7.26 43.94 5.03
148 205 1.412710 TCAGGTGTTCAAGAACGAGCT 59.587 47.619 8.28 9.06 43.94 4.09
149 206 2.158957 TCAGGTGTTCAAGAACGAGCTT 60.159 45.455 8.28 0.00 43.94 3.74
150 207 2.614057 CAGGTGTTCAAGAACGAGCTTT 59.386 45.455 8.28 0.00 43.94 3.51
151 208 3.065371 CAGGTGTTCAAGAACGAGCTTTT 59.935 43.478 8.28 0.00 43.94 2.27
152 209 3.065371 AGGTGTTCAAGAACGAGCTTTTG 59.935 43.478 8.28 0.00 43.94 2.44
153 210 2.783832 GTGTTCAAGAACGAGCTTTTGC 59.216 45.455 8.28 0.00 43.94 3.68
167 224 3.952535 GCTTTTGCTACATTCCGGTATG 58.047 45.455 18.55 18.55 43.35 2.39
168 225 3.243068 GCTTTTGCTACATTCCGGTATGG 60.243 47.826 23.12 9.09 43.35 2.74
169 226 2.631160 TTGCTACATTCCGGTATGGG 57.369 50.000 23.12 16.17 38.76 4.00
170 227 1.796017 TGCTACATTCCGGTATGGGA 58.204 50.000 23.12 11.01 38.76 4.37
171 228 1.691976 TGCTACATTCCGGTATGGGAG 59.308 52.381 23.12 19.31 37.40 4.30
172 229 1.692519 GCTACATTCCGGTATGGGAGT 59.307 52.381 23.12 6.58 37.40 3.85
173 230 2.104281 GCTACATTCCGGTATGGGAGTT 59.896 50.000 23.12 6.23 37.40 3.01
174 231 2.710096 ACATTCCGGTATGGGAGTTG 57.290 50.000 23.12 0.24 37.40 3.16
175 232 2.193127 ACATTCCGGTATGGGAGTTGA 58.807 47.619 23.12 0.00 37.40 3.18
176 233 2.093128 ACATTCCGGTATGGGAGTTGAC 60.093 50.000 23.12 0.00 37.40 3.18
177 234 0.533491 TTCCGGTATGGGAGTTGACG 59.467 55.000 0.00 0.00 37.40 4.35
178 235 0.323633 TCCGGTATGGGAGTTGACGA 60.324 55.000 0.00 0.00 38.76 4.20
179 236 0.750850 CCGGTATGGGAGTTGACGAT 59.249 55.000 0.00 0.00 0.00 3.73
180 237 1.538204 CCGGTATGGGAGTTGACGATG 60.538 57.143 0.00 0.00 0.00 3.84
181 238 1.583054 GGTATGGGAGTTGACGATGC 58.417 55.000 0.00 0.00 0.00 3.91
182 239 1.139058 GGTATGGGAGTTGACGATGCT 59.861 52.381 0.00 0.00 0.00 3.79
183 240 2.474816 GTATGGGAGTTGACGATGCTC 58.525 52.381 0.00 0.00 0.00 4.26
184 241 0.904649 ATGGGAGTTGACGATGCTCA 59.095 50.000 0.00 0.00 0.00 4.26
185 242 0.247460 TGGGAGTTGACGATGCTCAG 59.753 55.000 0.00 0.00 0.00 3.35
229 286 4.072131 AGCGTCCAAAGCAAAGATAAAGA 58.928 39.130 0.00 0.00 37.01 2.52
242 299 3.892284 AGATAAAGACGAGGAGAGCAGA 58.108 45.455 0.00 0.00 0.00 4.26
297 354 2.548295 GGAAAGGCAACCAACGCGA 61.548 57.895 15.93 0.00 37.17 5.87
316 373 2.364973 TACCAGAGATGGCCGCCA 60.365 61.111 16.17 16.17 38.19 5.69
426 483 4.008933 GTGAGGCTGGGAGCACGT 62.009 66.667 0.00 0.00 44.75 4.49
428 485 2.743928 GAGGCTGGGAGCACGTTG 60.744 66.667 0.00 0.00 44.75 4.10
599 706 3.976015 TCTGGGCCGAATATTCCTTTTT 58.024 40.909 9.87 0.00 0.00 1.94
655 762 2.610438 ACACAAGAATGAGGCCCAAT 57.390 45.000 0.00 0.00 0.00 3.16
661 768 0.107214 GAATGAGGCCCAATGACGGA 60.107 55.000 0.00 0.00 0.00 4.69
909 1019 4.536489 AGCTAGGTTTTTATCACTCCACCT 59.464 41.667 0.00 0.00 38.26 4.00
910 1020 5.724854 AGCTAGGTTTTTATCACTCCACCTA 59.275 40.000 0.00 0.00 36.10 3.08
911 1021 6.387220 AGCTAGGTTTTTATCACTCCACCTAT 59.613 38.462 0.00 0.00 36.52 2.57
972 1082 0.618968 AAGCCCCGATCTCCTTCACT 60.619 55.000 0.00 0.00 0.00 3.41
1034 1456 0.460284 ACTCAATCGCCGCCTTACTG 60.460 55.000 0.00 0.00 0.00 2.74
1041 1463 1.069935 GCCGCCTTACTGGATCTCC 59.930 63.158 0.00 0.00 38.35 3.71
1183 1605 2.744202 AGTTCATGATTTTCGCGCTCTT 59.256 40.909 5.56 0.00 0.00 2.85
1335 1757 2.215196 TCCGTGCAAGGTAAGTGTTTC 58.785 47.619 18.61 0.00 0.00 2.78
1570 2136 1.347707 TGGACACAGGTGATTGTCTCC 59.652 52.381 6.40 2.24 41.65 3.71
1650 2216 7.713764 AATTGAAGCAAGGTTGTTAACATTC 57.286 32.000 9.56 8.79 32.36 2.67
1747 2320 4.827692 ACAACTCCGAGTTTGTATATGCA 58.172 39.130 11.24 0.00 36.03 3.96
1840 2413 8.651589 TGTGGTTTAATTATAACAACATGGGA 57.348 30.769 12.74 0.00 35.16 4.37
1933 2506 9.698309 GTATGCTAAATCTGCTCATCTTAGTTA 57.302 33.333 0.00 0.00 0.00 2.24
2158 2749 5.122707 GGAGGATTCTTTCTTCCCTCAAT 57.877 43.478 0.00 0.00 43.27 2.57
2159 2750 5.129634 GGAGGATTCTTTCTTCCCTCAATC 58.870 45.833 0.00 0.00 43.27 2.67
2296 2887 2.697654 GCTAATGAGCCTGCCTATCAG 58.302 52.381 0.00 0.00 43.49 2.90
2298 2889 0.841961 AATGAGCCTGCCTATCAGCA 59.158 50.000 0.00 0.00 41.50 4.41
2307 2902 1.976132 GCCTATCAGCACTGCCTCCA 61.976 60.000 0.00 0.00 0.00 3.86
2392 2987 2.834638 AATAGGCAGCTGTGGGAATT 57.165 45.000 16.64 5.91 0.00 2.17
2412 3007 0.889306 GAACTAGCGACCTGGAGTGT 59.111 55.000 0.00 0.00 0.00 3.55
2457 3052 2.555325 TGAGCCAGCTGAATTTTGTGAG 59.445 45.455 17.39 0.00 0.00 3.51
2470 3065 4.765281 TTTTGTGAGAACTGTACGAACG 57.235 40.909 0.00 0.00 0.00 3.95
2503 3099 8.257306 ACTTTGTATTGATCAAGTGGTGTTTTT 58.743 29.630 14.54 0.00 0.00 1.94
2830 3427 5.006386 AGAAACCTCTTACAAAGCAGATGG 58.994 41.667 0.00 0.00 0.00 3.51
2841 3438 6.899393 ACAAAGCAGATGGAAGATAAAACA 57.101 33.333 0.00 0.00 0.00 2.83
2893 3490 2.281484 CACCCAGTTGTCACCGGG 60.281 66.667 6.32 0.00 44.88 5.73
2958 3555 1.612726 GCCTGCAGACAACAAGGATCT 60.613 52.381 17.39 0.00 0.00 2.75
2967 3564 2.832129 ACAACAAGGATCTAGAGCGGAA 59.168 45.455 1.16 0.00 0.00 4.30
2983 3580 1.399089 CGGAAACAACCTTGTCACGTT 59.601 47.619 0.00 0.00 41.31 3.99
2988 3585 6.037726 GGAAACAACCTTGTCACGTTTAAAT 58.962 36.000 0.00 0.00 41.31 1.40
3002 3599 3.945285 CGTTTAAATGATAGGGTGCCACT 59.055 43.478 0.79 0.00 0.00 4.00
3065 3662 6.040504 CCTGTTTTTAACAACTAGCCTCCTTT 59.959 38.462 6.10 0.00 41.61 3.11
3166 3766 8.713765 AAGATTAAATGCGAGTATTTTATGCG 57.286 30.769 4.61 0.00 32.79 4.73
3237 3837 3.153919 GGTGTCCTGATAAAGTTTGCCA 58.846 45.455 0.00 0.00 0.00 4.92
3250 3850 9.722056 GATAAAGTTTGCCAGTAGAATAATGTG 57.278 33.333 0.00 0.00 34.29 3.21
3416 4016 6.219473 CAGCCTCAGATATCTTTGTACGAAT 58.781 40.000 1.33 0.00 0.00 3.34
3444 4044 7.824779 GGTATGTTAGATCTAGGCATTTTAGGG 59.175 40.741 19.97 0.00 0.00 3.53
3446 4046 5.670361 TGTTAGATCTAGGCATTTTAGGGGT 59.330 40.000 2.02 0.00 0.00 4.95
3473 4073 2.233186 ACGAAGTAGGAAGTAAGGGCAC 59.767 50.000 0.00 0.00 41.94 5.01
3478 4078 0.323957 AGGAAGTAAGGGCACGTTCC 59.676 55.000 0.00 0.00 37.67 3.62
3565 4165 3.548818 GGCAAAACACTGACTCACACATC 60.549 47.826 0.00 0.00 0.00 3.06
3608 4228 5.451103 GGAAGGATCAATGCCTAAAAGCTTC 60.451 44.000 0.00 0.00 33.76 3.86
3651 4271 1.139163 GCAAGGCAAAATGTGGAACG 58.861 50.000 0.00 0.00 42.39 3.95
3667 4287 4.013728 TGGAACGAACCAAATATCCCTTG 58.986 43.478 0.00 0.00 36.96 3.61
3786 4407 7.857404 AATAGTGTATCTGTAGGCCACTATT 57.143 36.000 5.01 14.38 46.54 1.73
3932 4555 5.067283 GTGTTTACTCACACCCTTGTTTCAT 59.933 40.000 0.00 0.00 41.18 2.57
3933 4556 5.654650 TGTTTACTCACACCCTTGTTTCATT 59.345 36.000 0.00 0.00 31.66 2.57
3934 4557 6.183360 TGTTTACTCACACCCTTGTTTCATTC 60.183 38.462 0.00 0.00 31.66 2.67
4071 4694 8.054152 TGATACATTTTGTCTGCATGTTATGT 57.946 30.769 0.00 0.00 33.19 2.29
4161 4786 0.398381 TGCTTTGGCCTCAAACCCTT 60.398 50.000 3.32 0.00 37.89 3.95
4217 4843 4.782156 TCATGCGACACTTGTACAAATTG 58.218 39.130 10.03 11.84 0.00 2.32
4318 4944 9.136323 ACATAAGAAACTTTCTTCCTGTTGAAT 57.864 29.630 18.18 3.71 46.62 2.57
4385 5011 7.441157 TGATTTACTTCCTATCTGTTATTGCCG 59.559 37.037 0.00 0.00 0.00 5.69
4598 5231 6.701145 TTCACCTGTTGTAATGCTTGTAAA 57.299 33.333 0.00 0.00 0.00 2.01
4614 5247 5.621197 TTGTAAATTGTAAGCGTCTGCAT 57.379 34.783 0.00 0.00 46.23 3.96
4623 5256 1.549203 AGCGTCTGCATTTGGGAAAT 58.451 45.000 0.00 0.00 46.23 2.17
4756 5390 3.740115 TCTACCTTGTGAGTTTTGCCTC 58.260 45.455 0.00 0.00 0.00 4.70
4797 5433 8.693542 ACTTAGTGCTTATCAATTGAAAATGC 57.306 30.769 13.09 16.25 0.00 3.56
4856 5492 7.333528 TCATTAAATATGGTCAACTTCCAGC 57.666 36.000 0.00 0.00 38.42 4.85
4857 5493 7.118723 TCATTAAATATGGTCAACTTCCAGCT 58.881 34.615 0.00 0.00 38.42 4.24
4858 5494 8.271458 TCATTAAATATGGTCAACTTCCAGCTA 58.729 33.333 0.00 0.00 38.42 3.32
4859 5495 9.071276 CATTAAATATGGTCAACTTCCAGCTAT 57.929 33.333 0.00 0.00 38.42 2.97
4860 5496 6.949352 AAATATGGTCAACTTCCAGCTATG 57.051 37.500 0.00 0.00 38.42 2.23
4861 5497 5.636903 ATATGGTCAACTTCCAGCTATGT 57.363 39.130 0.00 0.00 38.42 2.29
4862 5498 3.788227 TGGTCAACTTCCAGCTATGTT 57.212 42.857 0.00 0.00 0.00 2.71
4863 5499 4.098914 TGGTCAACTTCCAGCTATGTTT 57.901 40.909 0.00 0.00 0.00 2.83
4864 5500 4.469657 TGGTCAACTTCCAGCTATGTTTT 58.530 39.130 0.00 0.00 0.00 2.43
4865 5501 5.626142 TGGTCAACTTCCAGCTATGTTTTA 58.374 37.500 0.00 0.00 0.00 1.52
4866 5502 6.065374 TGGTCAACTTCCAGCTATGTTTTAA 58.935 36.000 0.00 0.00 0.00 1.52
4867 5503 6.547880 TGGTCAACTTCCAGCTATGTTTTAAA 59.452 34.615 0.00 0.00 0.00 1.52
4868 5504 7.084486 GGTCAACTTCCAGCTATGTTTTAAAG 58.916 38.462 0.00 0.00 0.00 1.85
4869 5505 7.084486 GTCAACTTCCAGCTATGTTTTAAAGG 58.916 38.462 0.00 0.00 0.00 3.11
4870 5506 5.644977 ACTTCCAGCTATGTTTTAAAGGC 57.355 39.130 0.00 0.00 0.00 4.35
4871 5507 4.156008 ACTTCCAGCTATGTTTTAAAGGCG 59.844 41.667 0.00 0.00 0.00 5.52
4872 5508 3.681593 TCCAGCTATGTTTTAAAGGCGT 58.318 40.909 0.00 0.00 0.00 5.68
4873 5509 3.687698 TCCAGCTATGTTTTAAAGGCGTC 59.312 43.478 0.00 0.00 0.00 5.19
4874 5510 3.181500 CCAGCTATGTTTTAAAGGCGTCC 60.181 47.826 0.00 0.00 0.00 4.79
4875 5511 3.014623 AGCTATGTTTTAAAGGCGTCCC 58.985 45.455 0.00 0.00 0.00 4.46
4876 5512 3.014623 GCTATGTTTTAAAGGCGTCCCT 58.985 45.455 0.00 0.00 45.77 4.20
4877 5513 4.080751 AGCTATGTTTTAAAGGCGTCCCTA 60.081 41.667 0.00 0.00 41.90 3.53
4878 5514 4.637091 GCTATGTTTTAAAGGCGTCCCTAA 59.363 41.667 0.00 0.00 41.90 2.69
4879 5515 5.220796 GCTATGTTTTAAAGGCGTCCCTAAG 60.221 44.000 0.00 0.00 41.90 2.18
4880 5516 3.414269 TGTTTTAAAGGCGTCCCTAAGG 58.586 45.455 0.00 0.00 41.90 2.69
4881 5517 2.118313 TTTAAAGGCGTCCCTAAGGC 57.882 50.000 0.00 0.00 41.90 4.35
4882 5518 0.108041 TTAAAGGCGTCCCTAAGGCG 60.108 55.000 0.00 0.00 41.90 5.52
4883 5519 0.971959 TAAAGGCGTCCCTAAGGCGA 60.972 55.000 0.00 0.00 41.90 5.54
4884 5520 2.517484 AAAGGCGTCCCTAAGGCGAC 62.517 60.000 0.00 0.00 41.90 5.19
4921 5557 4.516195 GTCGAAGCGCTCCCCCTC 62.516 72.222 12.06 2.47 0.00 4.30
4929 5565 4.803908 GCTCCCCCTCCGCTTTGG 62.804 72.222 0.00 0.00 40.09 3.28
4939 5575 1.161843 TCCGCTTTGGAAAATCGACC 58.838 50.000 0.00 0.00 46.38 4.79
4940 5576 0.179200 CCGCTTTGGAAAATCGACCG 60.179 55.000 0.00 0.00 42.00 4.79
4941 5577 0.793104 CGCTTTGGAAAATCGACCGC 60.793 55.000 0.00 0.00 0.00 5.68
4942 5578 0.521735 GCTTTGGAAAATCGACCGCT 59.478 50.000 0.00 0.00 0.00 5.52
4943 5579 1.068541 GCTTTGGAAAATCGACCGCTT 60.069 47.619 0.00 0.00 0.00 4.68
4944 5580 2.607038 GCTTTGGAAAATCGACCGCTTT 60.607 45.455 0.00 0.00 0.00 3.51
4945 5581 2.697431 TTGGAAAATCGACCGCTTTG 57.303 45.000 0.00 0.00 0.00 2.77
4946 5582 0.878416 TGGAAAATCGACCGCTTTGG 59.122 50.000 0.00 0.00 46.41 3.28
4947 5583 0.170339 GGAAAATCGACCGCTTTGGG 59.830 55.000 0.00 0.00 44.64 4.12
4948 5584 0.456142 GAAAATCGACCGCTTTGGGC 60.456 55.000 0.00 0.00 45.45 5.36
4966 5602 3.195698 GCCTAGGCGTCCAAAGCG 61.196 66.667 20.16 0.00 35.00 4.68
4974 5610 4.770874 GTCCAAAGCGCCCGCCTA 62.771 66.667 2.29 0.00 43.17 3.93
4975 5611 4.467084 TCCAAAGCGCCCGCCTAG 62.467 66.667 2.29 0.00 43.17 3.02
5017 5653 4.817909 CCCCCTCCCTAAGGCGGT 62.818 72.222 0.00 0.00 44.71 5.68
5018 5654 2.284493 CCCCTCCCTAAGGCGGTA 59.716 66.667 0.00 0.00 44.71 4.02
5019 5655 1.383525 CCCCTCCCTAAGGCGGTAA 60.384 63.158 0.00 0.00 44.71 2.85
5020 5656 1.408453 CCCCTCCCTAAGGCGGTAAG 61.408 65.000 0.00 0.00 44.71 2.34
5021 5657 1.408453 CCCTCCCTAAGGCGGTAAGG 61.408 65.000 0.00 0.00 44.71 2.69
5040 5676 3.047613 GGCGTCGCCTTAAAAACATAG 57.952 47.619 28.98 0.00 46.69 2.23
5093 5729 9.715123 TTTGTTTACATATCATAGATTTGTGCG 57.285 29.630 11.61 0.00 0.00 5.34
5094 5730 8.655651 TGTTTACATATCATAGATTTGTGCGA 57.344 30.769 11.61 0.00 0.00 5.10
5095 5731 8.764287 TGTTTACATATCATAGATTTGTGCGAG 58.236 33.333 11.61 0.00 0.00 5.03
5096 5732 7.889589 TTACATATCATAGATTTGTGCGAGG 57.110 36.000 11.61 0.00 0.00 4.63
5097 5733 5.858381 ACATATCATAGATTTGTGCGAGGT 58.142 37.500 2.95 0.00 0.00 3.85
5098 5734 6.993079 ACATATCATAGATTTGTGCGAGGTA 58.007 36.000 2.95 0.00 0.00 3.08
5099 5735 6.868864 ACATATCATAGATTTGTGCGAGGTAC 59.131 38.462 2.95 0.00 0.00 3.34
5101 5737 5.339008 TCATAGATTTGTGCGAGGTACTT 57.661 39.130 0.00 0.00 41.55 2.24
5102 5738 5.348986 TCATAGATTTGTGCGAGGTACTTC 58.651 41.667 0.00 0.00 41.55 3.01
5103 5739 2.973945 AGATTTGTGCGAGGTACTTCC 58.026 47.619 0.00 0.00 41.55 3.46
5104 5740 2.301870 AGATTTGTGCGAGGTACTTCCA 59.698 45.455 0.00 0.00 41.55 3.53
5105 5741 2.163818 TTTGTGCGAGGTACTTCCAG 57.836 50.000 0.00 0.00 41.55 3.86
5106 5742 1.045407 TTGTGCGAGGTACTTCCAGT 58.955 50.000 0.00 0.00 41.55 4.00
5107 5743 1.045407 TGTGCGAGGTACTTCCAGTT 58.955 50.000 0.00 0.00 41.55 3.16
5108 5744 1.000506 TGTGCGAGGTACTTCCAGTTC 59.999 52.381 0.00 0.00 41.55 3.01
5109 5745 1.000506 GTGCGAGGTACTTCCAGTTCA 59.999 52.381 0.00 0.00 41.55 3.18
5110 5746 1.272490 TGCGAGGTACTTCCAGTTCAG 59.728 52.381 0.00 0.00 41.55 3.02
5111 5747 1.272769 GCGAGGTACTTCCAGTTCAGT 59.727 52.381 0.00 0.00 41.55 3.41
5112 5748 2.671632 GCGAGGTACTTCCAGTTCAGTC 60.672 54.545 0.00 0.00 41.55 3.51
5113 5749 2.557056 CGAGGTACTTCCAGTTCAGTCA 59.443 50.000 0.00 0.00 41.55 3.41
5114 5750 3.005472 CGAGGTACTTCCAGTTCAGTCAA 59.995 47.826 0.00 0.00 41.55 3.18
5115 5751 4.322049 CGAGGTACTTCCAGTTCAGTCAAT 60.322 45.833 0.00 0.00 41.55 2.57
5116 5752 4.899502 AGGTACTTCCAGTTCAGTCAATG 58.100 43.478 0.00 0.00 39.02 2.82
5117 5753 3.437049 GGTACTTCCAGTTCAGTCAATGC 59.563 47.826 0.00 0.00 35.97 3.56
5118 5754 3.213206 ACTTCCAGTTCAGTCAATGCA 57.787 42.857 0.00 0.00 0.00 3.96
5119 5755 3.554934 ACTTCCAGTTCAGTCAATGCAA 58.445 40.909 0.00 0.00 0.00 4.08
5120 5756 3.316308 ACTTCCAGTTCAGTCAATGCAAC 59.684 43.478 0.00 0.00 0.00 4.17
5121 5757 2.929641 TCCAGTTCAGTCAATGCAACA 58.070 42.857 0.00 0.00 0.00 3.33
5122 5758 2.880268 TCCAGTTCAGTCAATGCAACAG 59.120 45.455 0.00 0.00 0.00 3.16
5123 5759 2.620115 CCAGTTCAGTCAATGCAACAGT 59.380 45.455 0.00 0.00 0.00 3.55
5124 5760 3.067180 CCAGTTCAGTCAATGCAACAGTT 59.933 43.478 0.00 0.00 0.00 3.16
5125 5761 4.440525 CCAGTTCAGTCAATGCAACAGTTT 60.441 41.667 0.00 0.00 0.00 2.66
5126 5762 5.104374 CAGTTCAGTCAATGCAACAGTTTT 58.896 37.500 0.00 0.00 0.00 2.43
5127 5763 5.005012 CAGTTCAGTCAATGCAACAGTTTTG 59.995 40.000 0.00 0.00 0.00 2.44
5128 5764 4.717233 TCAGTCAATGCAACAGTTTTGT 57.283 36.364 0.00 0.00 39.87 2.83
5130 5766 5.477510 TCAGTCAATGCAACAGTTTTGTTT 58.522 33.333 0.00 0.00 45.01 2.83
5131 5767 6.625362 TCAGTCAATGCAACAGTTTTGTTTA 58.375 32.000 0.00 0.00 45.01 2.01
5132 5768 6.529829 TCAGTCAATGCAACAGTTTTGTTTAC 59.470 34.615 0.00 0.00 45.01 2.01
5133 5769 6.309980 CAGTCAATGCAACAGTTTTGTTTACA 59.690 34.615 0.00 0.00 45.01 2.41
5134 5770 7.010367 CAGTCAATGCAACAGTTTTGTTTACAT 59.990 33.333 0.00 0.00 45.01 2.29
5135 5771 8.194104 AGTCAATGCAACAGTTTTGTTTACATA 58.806 29.630 0.00 0.00 45.01 2.29
5136 5772 8.977505 GTCAATGCAACAGTTTTGTTTACATAT 58.022 29.630 0.00 0.00 45.01 1.78
5137 5773 9.190858 TCAATGCAACAGTTTTGTTTACATATC 57.809 29.630 0.00 0.00 45.01 1.63
5138 5774 8.976471 CAATGCAACAGTTTTGTTTACATATCA 58.024 29.630 0.00 0.00 45.01 2.15
5139 5775 9.709495 AATGCAACAGTTTTGTTTACATATCAT 57.291 25.926 0.00 0.00 45.01 2.45
5141 5777 9.838975 TGCAACAGTTTTGTTTACATATCATAG 57.161 29.630 0.00 0.00 45.01 2.23
5153 5789 7.889589 TTACATATCATAGATTTGTGCGAGG 57.110 36.000 11.61 0.00 0.00 4.63
5227 5865 2.042464 CTGATTAGCTGGACTAGGGCA 58.958 52.381 0.00 0.00 30.79 5.36
5264 5902 7.325660 TGTTAGTTAACATCTACTACCTCCG 57.674 40.000 8.61 0.00 40.93 4.63
5265 5903 6.886459 TGTTAGTTAACATCTACTACCTCCGT 59.114 38.462 8.61 0.00 40.93 4.69
5266 5904 7.066284 TGTTAGTTAACATCTACTACCTCCGTC 59.934 40.741 8.61 0.00 40.93 4.79
5267 5905 4.886489 AGTTAACATCTACTACCTCCGTCC 59.114 45.833 8.61 0.00 0.00 4.79
5268 5906 2.361643 ACATCTACTACCTCCGTCCC 57.638 55.000 0.00 0.00 0.00 4.46
5269 5907 1.567649 ACATCTACTACCTCCGTCCCA 59.432 52.381 0.00 0.00 0.00 4.37
5270 5908 2.177233 ACATCTACTACCTCCGTCCCAT 59.823 50.000 0.00 0.00 0.00 4.00
5271 5909 3.396946 ACATCTACTACCTCCGTCCCATA 59.603 47.826 0.00 0.00 0.00 2.74
5272 5910 4.141088 ACATCTACTACCTCCGTCCCATAA 60.141 45.833 0.00 0.00 0.00 1.90
5273 5911 4.736611 TCTACTACCTCCGTCCCATAAT 57.263 45.455 0.00 0.00 0.00 1.28
5274 5912 5.848286 TCTACTACCTCCGTCCCATAATA 57.152 43.478 0.00 0.00 0.00 0.98
5275 5913 6.398655 TCTACTACCTCCGTCCCATAATAT 57.601 41.667 0.00 0.00 0.00 1.28
5276 5914 7.515004 TCTACTACCTCCGTCCCATAATATA 57.485 40.000 0.00 0.00 0.00 0.86
5277 5915 7.932134 TCTACTACCTCCGTCCCATAATATAA 58.068 38.462 0.00 0.00 0.00 0.98
5278 5916 8.051535 TCTACTACCTCCGTCCCATAATATAAG 58.948 40.741 0.00 0.00 0.00 1.73
5279 5917 6.797707 ACTACCTCCGTCCCATAATATAAGA 58.202 40.000 0.00 0.00 0.00 2.10
5280 5918 7.243824 ACTACCTCCGTCCCATAATATAAGAA 58.756 38.462 0.00 0.00 0.00 2.52
5281 5919 6.356186 ACCTCCGTCCCATAATATAAGAAC 57.644 41.667 0.00 0.00 0.00 3.01
5282 5920 5.047519 ACCTCCGTCCCATAATATAAGAACG 60.048 44.000 0.00 0.00 0.00 3.95
5283 5921 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
5284 5922 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
5285 5923 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
5286 5924 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
5287 5925 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
5288 5926 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
5289 5927 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
5290 5928 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
5291 5929 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
5292 5930 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
5298 5936 7.781548 ATAAGAACGTTTTTGACACTACACT 57.218 32.000 13.87 0.00 0.00 3.55
5299 5937 8.876275 ATAAGAACGTTTTTGACACTACACTA 57.124 30.769 13.87 0.00 0.00 2.74
5300 5938 6.823678 AGAACGTTTTTGACACTACACTAG 57.176 37.500 0.46 0.00 0.00 2.57
5301 5939 6.335777 AGAACGTTTTTGACACTACACTAGT 58.664 36.000 0.46 0.00 40.28 2.57
5330 5968 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
5331 5969 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
5332 5970 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
5333 5971 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
5334 5972 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
5335 5973 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
5336 5974 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
5415 6053 7.833285 TTTTATTTTTCTACCCTGAGCAGTT 57.167 32.000 0.00 0.00 0.00 3.16
5429 6067 7.721399 ACCCTGAGCAGTTAATATGAATAAAGG 59.279 37.037 0.00 0.00 0.00 3.11
5593 6231 3.135348 TCATGCCTTTCTCCCAGTATCAG 59.865 47.826 0.00 0.00 0.00 2.90
5638 6276 8.621532 TGAGCTACACTGATTATCTTTGTTTT 57.378 30.769 4.98 0.00 0.00 2.43
5739 6378 7.654022 TTGTGTAAGATTTGGAACTCCTTTT 57.346 32.000 0.00 0.00 36.82 2.27
5856 6496 7.744087 TTGTCTTTAGTGTGCAATTCACTAT 57.256 32.000 14.37 0.00 44.37 2.12
5941 6583 3.232771 GTTCGACACGAGTACTCTTTCC 58.767 50.000 20.34 6.71 37.14 3.13
5969 6611 5.306419 TCTGCATGCTAGAAGATTGGTAGAT 59.694 40.000 20.33 0.00 0.00 1.98
5987 6629 5.239525 GGTAGATGGTGGATCAAGTTATTGC 59.760 44.000 0.00 0.00 36.30 3.56
6117 6760 5.512753 TGTTTCAGCATTAACTCTTGCAA 57.487 34.783 0.00 0.00 41.35 4.08
6118 6761 5.280945 TGTTTCAGCATTAACTCTTGCAAC 58.719 37.500 0.00 0.00 41.35 4.17
6183 6827 8.137437 CAGAAAGGTTAATGTTTGAGTGAATGT 58.863 33.333 0.00 0.00 0.00 2.71
6424 7068 8.511604 AGTTCTTTGAAGAAAATGAGAGACAA 57.488 30.769 7.69 0.00 45.77 3.18
6794 7438 4.004982 TGTTACCGGCTGATCTTTTTACC 58.995 43.478 0.00 0.00 0.00 2.85
7239 7884 3.384146 TCACATCCAAACAATGCTGTTGT 59.616 39.130 2.76 2.76 45.25 3.32
7268 7913 3.111484 TGGTCTTGTCCCATGTGCTATA 58.889 45.455 0.00 0.00 0.00 1.31
7317 7965 3.878699 ACGAAACGGTAAATTTGGTCTGT 59.121 39.130 0.00 0.20 0.00 3.41
7324 7972 5.212194 CGGTAAATTTGGTCTGTCAAGTTG 58.788 41.667 0.00 0.00 29.18 3.16
7558 8206 7.970102 TGTAGTCCCTCTAAACAAATGTAAGT 58.030 34.615 0.00 0.00 0.00 2.24
7645 8293 4.331992 TGTTGTGTTGTCCATTTGCATTTG 59.668 37.500 0.00 0.00 0.00 2.32
7732 8380 5.483937 ACTCATATACAAGGTCCAGACACAA 59.516 40.000 0.00 0.00 0.00 3.33
7870 8518 6.707608 ACCAAAAAGGAAGGTAACTAGTTACG 59.292 38.462 30.15 18.26 45.36 3.18
8201 8849 5.476614 GAAGGATCGTTACCTACTTTGTGT 58.523 41.667 0.00 0.00 36.67 3.72
8256 8930 1.871039 GTGCACGTTTAAGAAGAGGCA 59.129 47.619 0.00 0.00 0.00 4.75
8260 8934 3.003378 GCACGTTTAAGAAGAGGCAAACT 59.997 43.478 0.00 0.00 0.00 2.66
8310 8987 2.040544 CGTTGGTGCTTAGCCCAGG 61.041 63.158 12.69 7.24 32.39 4.45
8325 9002 2.489619 GCCCAGGCTCCATGATTTGATA 60.490 50.000 0.08 0.00 38.26 2.15
8329 9006 4.445305 CCAGGCTCCATGATTTGATACTCA 60.445 45.833 0.00 0.00 0.00 3.41
8463 9147 9.090692 CTGGTCAAAATAAGCCTAAATTGAATG 57.909 33.333 0.00 0.00 0.00 2.67
8484 9168 9.527157 TGAATGGATAAAGTAACTCAAAATCCA 57.473 29.630 3.80 3.80 43.93 3.41
8588 9274 5.181245 ACTTTGATAAGGGTCACATTTGTCG 59.819 40.000 0.00 0.00 35.61 4.35
8589 9275 4.545208 TGATAAGGGTCACATTTGTCGA 57.455 40.909 0.00 0.00 0.00 4.20
8590 9276 4.900684 TGATAAGGGTCACATTTGTCGAA 58.099 39.130 0.00 0.00 0.00 3.71
8591 9277 4.935205 TGATAAGGGTCACATTTGTCGAAG 59.065 41.667 0.00 0.00 0.00 3.79
8595 9281 2.218603 GGTCACATTTGTCGAAGGTGT 58.781 47.619 15.42 0.00 46.98 4.16
8596 9282 2.032030 GGTCACATTTGTCGAAGGTGTG 60.032 50.000 15.42 8.42 46.98 3.82
8597 9283 2.032030 GTCACATTTGTCGAAGGTGTGG 60.032 50.000 15.42 0.00 46.98 4.17
8598 9284 0.951558 ACATTTGTCGAAGGTGTGGC 59.048 50.000 0.00 0.00 29.76 5.01
8631 9317 4.451379 AACAAAATAAGCGCTGCAAAAC 57.549 36.364 12.58 0.00 0.00 2.43
8632 9318 3.452474 ACAAAATAAGCGCTGCAAAACA 58.548 36.364 12.58 0.00 0.00 2.83
8633 9319 3.868077 ACAAAATAAGCGCTGCAAAACAA 59.132 34.783 12.58 0.00 0.00 2.83
8634 9320 4.025813 ACAAAATAAGCGCTGCAAAACAAG 60.026 37.500 12.58 0.00 0.00 3.16
8636 9322 4.497473 AATAAGCGCTGCAAAACAAGTA 57.503 36.364 12.58 0.00 0.00 2.24
8637 9323 2.405892 AAGCGCTGCAAAACAAGTAG 57.594 45.000 12.58 0.00 0.00 2.57
8638 9324 0.040067 AGCGCTGCAAAACAAGTAGC 60.040 50.000 10.39 0.00 40.67 3.58
8640 9326 1.666888 GCGCTGCAAAACAAGTAGCAT 60.667 47.619 0.00 0.00 43.66 3.79
8641 9327 2.664916 CGCTGCAAAACAAGTAGCATT 58.335 42.857 0.00 0.00 43.66 3.56
8642 9328 3.052036 CGCTGCAAAACAAGTAGCATTT 58.948 40.909 0.00 0.00 43.66 2.32
8644 9330 4.606673 CGCTGCAAAACAAGTAGCATTTTG 60.607 41.667 0.00 4.67 43.66 2.44
8646 9332 4.125703 TGCAAAACAAGTAGCATTTTGGG 58.874 39.130 9.88 0.00 41.51 4.12
8648 9334 4.448732 GCAAAACAAGTAGCATTTTGGGAG 59.551 41.667 9.88 0.00 41.51 4.30
8651 9337 3.434309 ACAAGTAGCATTTTGGGAGCAT 58.566 40.909 0.00 0.00 0.00 3.79
8652 9338 3.445096 ACAAGTAGCATTTTGGGAGCATC 59.555 43.478 0.00 0.00 0.00 3.91
8653 9339 3.370840 AGTAGCATTTTGGGAGCATCA 57.629 42.857 0.00 0.00 36.25 3.07
8654 9340 3.907221 AGTAGCATTTTGGGAGCATCAT 58.093 40.909 0.00 0.00 36.25 2.45
8655 9341 3.635373 AGTAGCATTTTGGGAGCATCATG 59.365 43.478 0.00 0.00 36.25 3.07
8676 9362 7.551585 TCATGTTTGTTTTATTGGTCACAACT 58.448 30.769 0.00 0.00 39.87 3.16
8728 9414 5.261209 TGCAAGCACTTAGAACATTTGTT 57.739 34.783 0.00 0.00 41.64 2.83
8739 9429 7.492344 ACTTAGAACATTTGTTGAAGCCAAAAG 59.508 33.333 0.00 0.00 38.56 2.27
8752 9442 6.829849 TGAAGCCAAAAGGAAAAATTCAGAT 58.170 32.000 0.00 0.00 0.00 2.90
8801 9491 6.024552 TGGTTTTATTGTTCATCAAGCTCC 57.975 37.500 0.00 0.00 39.55 4.70
8807 9521 0.095417 GTTCATCAAGCTCCGCGTTC 59.905 55.000 4.92 0.00 0.00 3.95
8810 9524 1.021390 CATCAAGCTCCGCGTTCCTT 61.021 55.000 4.92 0.53 0.00 3.36
8831 9545 5.927689 CCTTTAAATCTTGCATGCAGTGAAA 59.072 36.000 21.50 14.28 0.00 2.69
8847 9563 3.447742 GTGAAACTTTTTCTGGTGCCAG 58.552 45.455 11.82 11.82 44.86 4.85
8867 9589 5.919141 GCCAGATCATCAAAATTGTCTATGC 59.081 40.000 0.00 0.00 0.00 3.14
8869 9591 6.916387 CCAGATCATCAAAATTGTCTATGCAC 59.084 38.462 0.00 0.00 0.00 4.57
8874 9596 7.854534 TCATCAAAATTGTCTATGCACGATAG 58.145 34.615 0.00 0.00 46.19 2.08
8899 9621 8.308931 AGTTTCATTACGGACAACTTAGTATGA 58.691 33.333 0.00 0.00 0.00 2.15
8908 9630 6.475727 CGGACAACTTAGTATGATACACTTGG 59.524 42.308 5.28 0.00 0.00 3.61
8918 9640 4.202245 TGATACACTTGGTAGGAGTTGC 57.798 45.455 0.00 0.00 34.92 4.17
8924 9646 2.706190 ACTTGGTAGGAGTTGCTTGAGT 59.294 45.455 0.00 0.00 0.00 3.41
8928 9650 0.324943 TAGGAGTTGCTTGAGTGGCC 59.675 55.000 0.00 0.00 0.00 5.36
8936 9658 0.807496 GCTTGAGTGGCCACTTCATC 59.193 55.000 37.98 25.47 42.66 2.92
8937 9659 1.883638 GCTTGAGTGGCCACTTCATCA 60.884 52.381 37.98 27.71 42.66 3.07
8938 9660 2.507484 CTTGAGTGGCCACTTCATCAA 58.493 47.619 37.98 31.68 42.66 2.57
8939 9661 2.655090 TGAGTGGCCACTTCATCAAA 57.345 45.000 37.98 15.55 42.66 2.69
8940 9662 2.942804 TGAGTGGCCACTTCATCAAAA 58.057 42.857 37.98 14.22 42.66 2.44
8941 9663 3.499338 TGAGTGGCCACTTCATCAAAAT 58.501 40.909 37.98 13.49 42.66 1.82
8942 9664 3.896888 TGAGTGGCCACTTCATCAAAATT 59.103 39.130 37.98 12.91 42.66 1.82
8943 9665 5.076182 TGAGTGGCCACTTCATCAAAATTA 58.924 37.500 37.98 7.34 42.66 1.40
8944 9666 5.716228 TGAGTGGCCACTTCATCAAAATTAT 59.284 36.000 37.98 12.20 42.66 1.28
8945 9667 6.127647 TGAGTGGCCACTTCATCAAAATTATC 60.128 38.462 37.98 20.42 42.66 1.75
8946 9668 5.954150 AGTGGCCACTTCATCAAAATTATCT 59.046 36.000 33.20 4.37 38.83 1.98
8947 9669 7.118723 AGTGGCCACTTCATCAAAATTATCTA 58.881 34.615 33.20 0.00 38.83 1.98
8948 9670 7.284034 AGTGGCCACTTCATCAAAATTATCTAG 59.716 37.037 33.20 0.00 38.83 2.43
8949 9671 7.067494 GTGGCCACTTCATCAAAATTATCTAGT 59.933 37.037 29.12 0.00 0.00 2.57
8950 9672 7.615365 TGGCCACTTCATCAAAATTATCTAGTT 59.385 33.333 0.00 0.00 0.00 2.24
8951 9673 7.917505 GGCCACTTCATCAAAATTATCTAGTTG 59.082 37.037 0.00 0.00 0.00 3.16
8952 9674 7.917505 GCCACTTCATCAAAATTATCTAGTTGG 59.082 37.037 0.00 0.00 0.00 3.77
8953 9675 7.917505 CCACTTCATCAAAATTATCTAGTTGGC 59.082 37.037 0.00 0.00 0.00 4.52
8954 9676 8.461222 CACTTCATCAAAATTATCTAGTTGGCA 58.539 33.333 0.00 0.00 0.00 4.92
8955 9677 9.193806 ACTTCATCAAAATTATCTAGTTGGCAT 57.806 29.630 0.00 0.00 0.00 4.40
8956 9678 9.459640 CTTCATCAAAATTATCTAGTTGGCATG 57.540 33.333 0.00 0.00 0.00 4.06
8957 9679 8.523915 TCATCAAAATTATCTAGTTGGCATGT 57.476 30.769 0.00 0.00 0.00 3.21
8958 9680 9.625747 TCATCAAAATTATCTAGTTGGCATGTA 57.374 29.630 0.00 0.00 0.00 2.29
8961 9683 9.625747 TCAAAATTATCTAGTTGGCATGTATGA 57.374 29.630 0.00 0.00 0.00 2.15
8964 9686 7.621428 ATTATCTAGTTGGCATGTATGATGC 57.379 36.000 0.00 0.00 43.85 3.91
8965 9687 4.694760 TCTAGTTGGCATGTATGATGCT 57.305 40.909 10.40 0.00 44.02 3.79
8966 9688 5.039920 TCTAGTTGGCATGTATGATGCTT 57.960 39.130 10.40 0.00 44.02 3.91
8967 9689 5.059161 TCTAGTTGGCATGTATGATGCTTC 58.941 41.667 10.40 0.00 44.02 3.86
8968 9690 2.954318 AGTTGGCATGTATGATGCTTCC 59.046 45.455 10.40 1.24 44.02 3.46
8969 9691 2.689471 GTTGGCATGTATGATGCTTCCA 59.311 45.455 10.40 0.09 44.02 3.53
8970 9692 3.232720 TGGCATGTATGATGCTTCCAT 57.767 42.857 10.40 0.00 44.02 3.41
8971 9693 3.568443 TGGCATGTATGATGCTTCCATT 58.432 40.909 10.40 0.00 44.02 3.16
8972 9694 4.727677 TGGCATGTATGATGCTTCCATTA 58.272 39.130 10.40 0.00 44.02 1.90
8973 9695 5.326900 TGGCATGTATGATGCTTCCATTAT 58.673 37.500 10.40 0.00 44.02 1.28
8974 9696 5.184287 TGGCATGTATGATGCTTCCATTATG 59.816 40.000 10.40 0.00 44.02 1.90
8975 9697 5.393787 GGCATGTATGATGCTTCCATTATGG 60.394 44.000 4.57 4.57 44.02 2.74
8976 9698 5.416639 GCATGTATGATGCTTCCATTATGGA 59.583 40.000 10.29 10.29 42.00 3.41
8977 9699 6.624423 GCATGTATGATGCTTCCATTATGGAC 60.624 42.308 14.25 4.14 40.65 4.02
8978 9700 8.919269 GCATGTATGATGCTTCCATTATGGACA 61.919 40.741 14.25 10.12 40.65 4.02
8988 9710 5.772393 TCCATTATGGACAACCTAAGTGT 57.228 39.130 10.29 0.00 42.67 3.55
8989 9711 6.134535 TCCATTATGGACAACCTAAGTGTT 57.865 37.500 10.29 0.00 42.67 3.32
8990 9712 7.260387 TCCATTATGGACAACCTAAGTGTTA 57.740 36.000 10.29 0.00 42.67 2.41
8991 9713 7.335627 TCCATTATGGACAACCTAAGTGTTAG 58.664 38.462 10.29 0.00 42.67 2.34
8992 9714 7.181305 TCCATTATGGACAACCTAAGTGTTAGA 59.819 37.037 10.29 0.00 42.67 2.10
8993 9715 7.495934 CCATTATGGACAACCTAAGTGTTAGAG 59.504 40.741 5.05 0.00 40.96 2.43
8994 9716 4.267349 TGGACAACCTAAGTGTTAGAGC 57.733 45.455 0.00 0.00 35.20 4.09
8995 9717 3.644265 TGGACAACCTAAGTGTTAGAGCA 59.356 43.478 0.00 0.00 35.20 4.26
8996 9718 4.101898 TGGACAACCTAAGTGTTAGAGCAA 59.898 41.667 0.00 0.00 35.20 3.91
8997 9719 5.061179 GGACAACCTAAGTGTTAGAGCAAA 58.939 41.667 0.00 0.00 35.20 3.68
8998 9720 5.529800 GGACAACCTAAGTGTTAGAGCAAAA 59.470 40.000 0.00 0.00 35.20 2.44
8999 9721 6.206829 GGACAACCTAAGTGTTAGAGCAAAAT 59.793 38.462 0.00 0.00 35.20 1.82
9000 9722 6.970484 ACAACCTAAGTGTTAGAGCAAAATG 58.030 36.000 0.00 0.00 35.20 2.32
9001 9723 6.770785 ACAACCTAAGTGTTAGAGCAAAATGA 59.229 34.615 0.00 0.00 35.20 2.57
9002 9724 7.041098 ACAACCTAAGTGTTAGAGCAAAATGAG 60.041 37.037 0.00 0.00 35.20 2.90
9003 9725 6.769512 ACCTAAGTGTTAGAGCAAAATGAGA 58.230 36.000 0.00 0.00 35.20 3.27
9004 9726 7.398024 ACCTAAGTGTTAGAGCAAAATGAGAT 58.602 34.615 0.00 0.00 35.20 2.75
9005 9727 7.885399 ACCTAAGTGTTAGAGCAAAATGAGATT 59.115 33.333 0.00 0.00 35.20 2.40
9006 9728 8.180267 CCTAAGTGTTAGAGCAAAATGAGATTG 58.820 37.037 0.00 0.00 35.20 2.67
9007 9729 7.750229 AAGTGTTAGAGCAAAATGAGATTGA 57.250 32.000 0.00 0.00 0.00 2.57
9008 9730 7.750229 AGTGTTAGAGCAAAATGAGATTGAA 57.250 32.000 0.00 0.00 0.00 2.69
9009 9731 8.345724 AGTGTTAGAGCAAAATGAGATTGAAT 57.654 30.769 0.00 0.00 0.00 2.57
9010 9732 9.453572 AGTGTTAGAGCAAAATGAGATTGAATA 57.546 29.630 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 55 0.032678 CTCGCGACCTGCATTATCCT 59.967 55.000 3.71 0.00 46.97 3.24
53 56 1.560860 GCTCGCGACCTGCATTATCC 61.561 60.000 3.71 0.00 46.97 2.59
56 59 1.519234 CTGCTCGCGACCTGCATTA 60.519 57.895 19.97 0.19 46.97 1.90
65 68 0.595053 GCTATTGCTACTGCTCGCGA 60.595 55.000 9.26 9.26 40.48 5.87
132 189 2.783832 GCAAAAGCTCGTTCTTGAACAC 59.216 45.455 13.05 3.02 0.00 3.32
133 190 2.682856 AGCAAAAGCTCGTTCTTGAACA 59.317 40.909 13.05 1.25 0.00 3.18
134 191 3.340337 AGCAAAAGCTCGTTCTTGAAC 57.660 42.857 3.60 3.60 0.00 3.18
135 192 3.874543 TGTAGCAAAAGCTCGTTCTTGAA 59.125 39.130 0.00 0.00 0.00 2.69
136 193 3.462982 TGTAGCAAAAGCTCGTTCTTGA 58.537 40.909 0.00 0.00 0.00 3.02
137 194 3.878086 TGTAGCAAAAGCTCGTTCTTG 57.122 42.857 0.00 0.00 0.00 3.02
138 195 4.083271 GGAATGTAGCAAAAGCTCGTTCTT 60.083 41.667 14.98 0.00 0.00 2.52
139 196 3.437049 GGAATGTAGCAAAAGCTCGTTCT 59.563 43.478 14.98 0.00 0.00 3.01
140 197 3.725010 CGGAATGTAGCAAAAGCTCGTTC 60.725 47.826 0.00 3.85 0.00 3.95
141 198 2.159627 CGGAATGTAGCAAAAGCTCGTT 59.840 45.455 0.00 0.00 0.00 3.85
142 199 1.732259 CGGAATGTAGCAAAAGCTCGT 59.268 47.619 0.00 0.00 0.00 4.18
143 200 1.062587 CCGGAATGTAGCAAAAGCTCG 59.937 52.381 0.00 0.00 0.00 5.03
144 201 2.084546 ACCGGAATGTAGCAAAAGCTC 58.915 47.619 9.46 0.00 0.00 4.09
145 202 2.200373 ACCGGAATGTAGCAAAAGCT 57.800 45.000 9.46 0.00 0.00 3.74
146 203 3.243068 CCATACCGGAATGTAGCAAAAGC 60.243 47.826 9.46 0.00 36.56 3.51
147 204 3.315191 CCCATACCGGAATGTAGCAAAAG 59.685 47.826 9.46 0.00 36.56 2.27
148 205 3.054287 TCCCATACCGGAATGTAGCAAAA 60.054 43.478 9.46 0.00 36.56 2.44
149 206 2.506231 TCCCATACCGGAATGTAGCAAA 59.494 45.455 9.46 0.00 36.56 3.68
150 207 2.104111 CTCCCATACCGGAATGTAGCAA 59.896 50.000 9.46 0.00 36.56 3.91
151 208 1.691976 CTCCCATACCGGAATGTAGCA 59.308 52.381 9.46 0.00 36.56 3.49
152 209 1.692519 ACTCCCATACCGGAATGTAGC 59.307 52.381 9.46 0.00 36.56 3.58
153 210 3.386726 TCAACTCCCATACCGGAATGTAG 59.613 47.826 9.46 0.18 36.56 2.74
154 211 3.133362 GTCAACTCCCATACCGGAATGTA 59.867 47.826 9.46 0.00 36.56 2.29
155 212 2.093128 GTCAACTCCCATACCGGAATGT 60.093 50.000 9.46 0.00 36.56 2.71
156 213 2.561569 GTCAACTCCCATACCGGAATG 58.438 52.381 9.46 0.00 36.56 2.67
157 214 1.138266 CGTCAACTCCCATACCGGAAT 59.862 52.381 9.46 0.00 36.56 3.01
158 215 0.533491 CGTCAACTCCCATACCGGAA 59.467 55.000 9.46 0.00 36.56 4.30
159 216 0.323633 TCGTCAACTCCCATACCGGA 60.324 55.000 9.46 0.00 36.56 5.14
160 217 0.750850 ATCGTCAACTCCCATACCGG 59.249 55.000 0.00 0.00 0.00 5.28
161 218 1.852942 CATCGTCAACTCCCATACCG 58.147 55.000 0.00 0.00 0.00 4.02
162 219 1.139058 AGCATCGTCAACTCCCATACC 59.861 52.381 0.00 0.00 0.00 2.73
163 220 2.159099 TGAGCATCGTCAACTCCCATAC 60.159 50.000 0.00 0.00 38.61 2.39
164 221 2.101415 CTGAGCATCGTCAACTCCCATA 59.899 50.000 0.00 0.00 38.61 2.74
165 222 0.904649 TGAGCATCGTCAACTCCCAT 59.095 50.000 0.00 0.00 38.61 4.00
166 223 0.247460 CTGAGCATCGTCAACTCCCA 59.753 55.000 0.00 0.00 38.61 4.37
167 224 0.247736 ACTGAGCATCGTCAACTCCC 59.752 55.000 0.00 0.00 38.61 4.30
168 225 1.203523 AGACTGAGCATCGTCAACTCC 59.796 52.381 0.00 0.00 39.77 3.85
169 226 2.645730 AGACTGAGCATCGTCAACTC 57.354 50.000 0.00 0.00 39.77 3.01
170 227 2.353208 GGAAGACTGAGCATCGTCAACT 60.353 50.000 0.00 0.00 39.77 3.16
171 228 1.996191 GGAAGACTGAGCATCGTCAAC 59.004 52.381 0.00 0.00 39.77 3.18
172 229 1.618343 TGGAAGACTGAGCATCGTCAA 59.382 47.619 0.00 0.00 39.77 3.18
173 230 1.256812 TGGAAGACTGAGCATCGTCA 58.743 50.000 0.00 0.00 39.77 4.35
174 231 1.996191 GTTGGAAGACTGAGCATCGTC 59.004 52.381 0.00 0.00 38.61 4.20
175 232 1.620819 AGTTGGAAGACTGAGCATCGT 59.379 47.619 0.00 0.00 38.61 3.73
176 233 2.094286 AGAGTTGGAAGACTGAGCATCG 60.094 50.000 0.00 0.00 38.61 3.84
177 234 3.260740 CAGAGTTGGAAGACTGAGCATC 58.739 50.000 0.00 0.00 32.90 3.91
178 235 2.614987 GCAGAGTTGGAAGACTGAGCAT 60.615 50.000 0.00 0.00 32.90 3.79
179 236 1.270518 GCAGAGTTGGAAGACTGAGCA 60.271 52.381 0.00 0.00 32.90 4.26
180 237 1.270518 TGCAGAGTTGGAAGACTGAGC 60.271 52.381 0.00 0.00 32.90 4.26
181 238 2.827800 TGCAGAGTTGGAAGACTGAG 57.172 50.000 0.00 0.00 32.90 3.35
182 239 3.206150 GTTTGCAGAGTTGGAAGACTGA 58.794 45.455 0.00 0.00 35.96 3.41
183 240 2.032549 CGTTTGCAGAGTTGGAAGACTG 60.033 50.000 0.00 0.00 35.96 3.51
184 241 2.158957 TCGTTTGCAGAGTTGGAAGACT 60.159 45.455 0.00 0.00 35.96 3.24
185 242 2.210116 TCGTTTGCAGAGTTGGAAGAC 58.790 47.619 0.00 0.00 35.96 3.01
229 286 2.752238 CCGGTCTGCTCTCCTCGT 60.752 66.667 0.00 0.00 0.00 4.18
252 309 2.512515 GCTGCCAGTCATCGTCCC 60.513 66.667 0.00 0.00 0.00 4.46
267 324 2.387757 TGCCTTTCCTTTCAACTTGCT 58.612 42.857 0.00 0.00 0.00 3.91
297 354 2.435693 GGCGGCCATCTCTGGTAGT 61.436 63.158 15.62 0.00 45.10 2.73
316 373 3.222354 GACAAGGTCCAGCGACGGT 62.222 63.158 0.00 0.00 40.17 4.83
426 483 2.108157 CGGCGGATCGATTCCCAA 59.892 61.111 0.00 0.00 42.06 4.12
599 706 0.036765 CGGAATCCACTCGTTCCCAA 60.037 55.000 0.00 0.00 40.61 4.12
613 720 0.739813 GTACGCAGGCAGAACGGAAT 60.740 55.000 0.00 0.00 0.00 3.01
655 762 0.254747 GGAATGGGTCCAATCCGTCA 59.745 55.000 8.22 0.00 46.97 4.35
708 815 4.954933 GGCCTGCCGTGAAGAATA 57.045 55.556 0.00 0.00 0.00 1.75
939 1049 3.787001 GCTTCGAGGGGGAGGGTG 61.787 72.222 0.00 0.00 0.00 4.61
946 1056 3.930012 GATCGGGGCTTCGAGGGG 61.930 72.222 0.00 0.00 42.69 4.79
947 1057 2.840102 AGATCGGGGCTTCGAGGG 60.840 66.667 0.00 0.00 42.69 4.30
972 1082 1.076727 TCTGGCACGGAGAGGAGAA 59.923 57.895 0.00 0.00 39.80 2.87
1034 1456 0.253327 ACAAGGAAAGGCGGAGATCC 59.747 55.000 0.00 0.00 0.00 3.36
1041 1463 1.669795 GCCATCAAACAAGGAAAGGCG 60.670 52.381 0.00 0.00 32.39 5.52
1183 1605 0.179048 AGAATCGATTGGCGCATCCA 60.179 50.000 16.96 0.00 44.85 3.41
1190 1612 1.303309 CACTCCCAGAATCGATTGGC 58.697 55.000 16.96 1.60 32.98 4.52
1191 1613 1.303309 GCACTCCCAGAATCGATTGG 58.697 55.000 16.96 12.38 0.00 3.16
1322 1744 3.595190 AAGCAGGGAAACACTTACCTT 57.405 42.857 0.00 0.00 44.35 3.50
1335 1757 3.438781 TGCACGTTTCTTAATAAGCAGGG 59.561 43.478 0.00 0.00 0.00 4.45
1549 2115 3.126001 GAGACAATCACCTGTGTCCAA 57.874 47.619 0.36 0.00 44.30 3.53
1747 2320 4.142600 GCTCGCCAAAGAAATATTGACACT 60.143 41.667 0.00 0.00 0.00 3.55
1814 2387 9.090103 TCCCATGTTGTTATAATTAAACCACAA 57.910 29.630 14.97 8.60 36.46 3.33
1887 2460 9.035607 AGCATACTAGTCAATAAAAAGATCACG 57.964 33.333 0.00 0.00 0.00 4.35
1906 2479 7.961351 ACTAAGATGAGCAGATTTAGCATACT 58.039 34.615 0.00 0.00 0.00 2.12
1933 2506 7.651808 ACAAAATTCAGAAACTCATTCGTCAT 58.348 30.769 0.00 0.00 43.15 3.06
2077 2650 3.587506 ACCTTCAGTTGGCTTAGGTACAT 59.412 43.478 0.00 0.00 36.17 2.29
2127 2718 7.293828 GGAAGAAAGAATCCTCCCTTCAATAT 58.706 38.462 0.00 0.00 33.15 1.28
2128 2719 6.663734 GGAAGAAAGAATCCTCCCTTCAATA 58.336 40.000 0.00 0.00 33.15 1.90
2129 2720 5.514169 GGAAGAAAGAATCCTCCCTTCAAT 58.486 41.667 0.00 0.00 33.15 2.57
2158 2749 2.922950 CGGGGTGACGGACGAAAGA 61.923 63.158 0.00 0.00 0.00 2.52
2159 2750 2.431942 CGGGGTGACGGACGAAAG 60.432 66.667 0.00 0.00 0.00 2.62
2296 2887 1.246056 TGCTCAAATGGAGGCAGTGC 61.246 55.000 6.55 6.55 44.22 4.40
2298 2889 0.964358 GCTGCTCAAATGGAGGCAGT 60.964 55.000 13.89 0.00 43.59 4.40
2307 2902 1.553706 CTGGGGAAAGCTGCTCAAAT 58.446 50.000 1.00 0.00 0.00 2.32
2392 2987 0.888619 CACTCCAGGTCGCTAGTTCA 59.111 55.000 0.00 0.00 0.00 3.18
2412 3007 6.540914 CAGATGGTTAGCGGGTAAGAATTTAA 59.459 38.462 0.00 0.00 0.00 1.52
2457 3052 2.428888 AAGGGACGTTCGTACAGTTC 57.571 50.000 9.76 0.00 0.00 3.01
2470 3065 7.148239 CCACTTGATCAATACAAAGTAAGGGAC 60.148 40.741 8.96 0.00 0.00 4.46
2503 3099 3.866703 TGGTTGTAGGGTGACATTCAA 57.133 42.857 0.00 0.00 0.00 2.69
2510 3106 2.488347 GCCTCTTTTGGTTGTAGGGTGA 60.488 50.000 0.00 0.00 0.00 4.02
2691 3287 4.460731 TCTCTGACACATACTCTTCTGGTG 59.539 45.833 0.00 0.00 35.66 4.17
2893 3490 1.610554 TACACGGTAGGCAGCCTTCC 61.611 60.000 24.36 24.36 37.66 3.46
2958 3555 2.103432 TGACAAGGTTGTTTCCGCTCTA 59.897 45.455 0.00 0.00 42.43 2.43
2967 3564 6.197364 TCATTTAAACGTGACAAGGTTGTT 57.803 33.333 1.58 0.00 42.43 2.83
2983 3580 4.473196 TCTCAGTGGCACCCTATCATTTAA 59.527 41.667 15.27 0.00 0.00 1.52
2988 3585 1.195115 GTCTCAGTGGCACCCTATCA 58.805 55.000 15.27 0.00 0.00 2.15
3002 3599 2.075566 TTGGTGTGGGGCAGTCTCA 61.076 57.895 0.00 0.00 0.00 3.27
3114 3712 7.042321 CGATAAAACACAGAGGTAACAAACTCA 60.042 37.037 0.00 0.00 41.41 3.41
3160 3760 3.556365 TCAACGAAGTCAACAACGCATAA 59.444 39.130 0.00 0.00 45.00 1.90
3166 3766 8.521059 GTTAAAATCTTCAACGAAGTCAACAAC 58.479 33.333 3.81 2.11 45.00 3.32
3227 3827 7.524717 ACACATTATTCTACTGGCAAACTTT 57.475 32.000 0.00 0.00 0.00 2.66
3250 3850 8.280497 CGTTGCAACAGGGTAATAAAGATATAC 58.720 37.037 28.01 0.00 0.00 1.47
3416 4016 9.778741 CTAAAATGCCTAGATCTAACATACCAA 57.221 33.333 15.02 4.88 0.00 3.67
3444 4044 4.189639 ACTTCCTACTTCGTCAATCACC 57.810 45.455 0.00 0.00 0.00 4.02
3446 4046 5.105473 CCCTTACTTCCTACTTCGTCAATCA 60.105 44.000 0.00 0.00 0.00 2.57
3565 4165 1.016627 CCACAGTTGTGCATATCCCG 58.983 55.000 6.74 0.00 44.34 5.14
3608 4228 0.598680 GCTATCTGTAGGCACGCCAG 60.599 60.000 11.35 0.00 38.92 4.85
3642 4262 3.951680 GGGATATTTGGTTCGTTCCACAT 59.048 43.478 1.29 3.86 37.20 3.21
3651 4271 8.349568 ACTTTTACTCAAGGGATATTTGGTTC 57.650 34.615 0.00 0.00 0.00 3.62
3667 4287 5.608449 AGTACAACCACAGGACTTTTACTC 58.392 41.667 0.00 0.00 0.00 2.59
3786 4407 3.040147 ACTTCTTCTCGGCGAATGAAA 57.960 42.857 12.13 2.71 0.00 2.69
3932 4555 3.614176 CAGCATCGACGATGAAAGAAGAA 59.386 43.478 35.61 0.00 42.09 2.52
3933 4556 3.119495 TCAGCATCGACGATGAAAGAAGA 60.119 43.478 35.61 20.64 42.09 2.87
3934 4557 3.182182 TCAGCATCGACGATGAAAGAAG 58.818 45.455 35.61 19.06 42.09 2.85
4052 4675 9.577110 CAGAAATACATAACATGCAGACAAAAT 57.423 29.630 0.00 0.00 0.00 1.82
4161 4786 5.762279 AGGACAAACCCAGTTAGAAAAAGA 58.238 37.500 0.00 0.00 40.05 2.52
4217 4843 6.374333 ACAACCACTATGATATTGTGAACACC 59.626 38.462 2.46 0.00 38.08 4.16
4598 5231 2.164219 CCCAAATGCAGACGCTTACAAT 59.836 45.455 0.00 0.00 39.64 2.71
4614 5247 6.825944 TGATGTTCGACAATATTTCCCAAA 57.174 33.333 0.00 0.00 0.00 3.28
4623 5256 9.820229 GAAGTAACATTTTGATGTTCGACAATA 57.180 29.630 7.94 0.00 43.07 1.90
4756 5390 6.979238 AGCACTAAGTCCTTAGCTAATTTACG 59.021 38.462 6.64 0.00 44.74 3.18
4797 5433 4.044336 AGAGAGAAGCACTGATCGATTG 57.956 45.455 0.00 0.00 0.00 2.67
4848 5484 4.156008 CGCCTTTAAAACATAGCTGGAAGT 59.844 41.667 0.00 0.00 35.30 3.01
4849 5485 4.156008 ACGCCTTTAAAACATAGCTGGAAG 59.844 41.667 0.00 0.00 0.00 3.46
4850 5486 4.076394 ACGCCTTTAAAACATAGCTGGAA 58.924 39.130 0.00 0.00 0.00 3.53
4851 5487 3.681593 ACGCCTTTAAAACATAGCTGGA 58.318 40.909 0.00 0.00 0.00 3.86
4852 5488 3.181500 GGACGCCTTTAAAACATAGCTGG 60.181 47.826 0.00 0.00 0.00 4.85
4853 5489 3.181500 GGGACGCCTTTAAAACATAGCTG 60.181 47.826 0.00 0.00 0.00 4.24
4854 5490 3.014623 GGGACGCCTTTAAAACATAGCT 58.985 45.455 0.00 0.00 0.00 3.32
4855 5491 3.014623 AGGGACGCCTTTAAAACATAGC 58.985 45.455 0.00 0.00 0.00 2.97
4856 5492 5.296035 CCTTAGGGACGCCTTTAAAACATAG 59.704 44.000 0.00 0.00 33.58 2.23
4857 5493 5.187687 CCTTAGGGACGCCTTTAAAACATA 58.812 41.667 0.00 0.00 33.58 2.29
4858 5494 4.014406 CCTTAGGGACGCCTTTAAAACAT 58.986 43.478 0.00 0.00 33.58 2.71
4859 5495 3.414269 CCTTAGGGACGCCTTTAAAACA 58.586 45.455 0.00 0.00 33.58 2.83
4860 5496 2.163010 GCCTTAGGGACGCCTTTAAAAC 59.837 50.000 0.00 0.00 33.58 2.43
4861 5497 2.439409 GCCTTAGGGACGCCTTTAAAA 58.561 47.619 0.00 0.00 33.58 1.52
4862 5498 1.676615 CGCCTTAGGGACGCCTTTAAA 60.677 52.381 0.00 0.00 33.58 1.52
4863 5499 0.108041 CGCCTTAGGGACGCCTTTAA 60.108 55.000 0.00 0.00 33.58 1.52
4864 5500 0.971959 TCGCCTTAGGGACGCCTTTA 60.972 55.000 0.00 0.00 34.09 1.85
4865 5501 2.267961 CGCCTTAGGGACGCCTTT 59.732 61.111 0.00 0.00 33.58 3.11
4866 5502 2.682494 TCGCCTTAGGGACGCCTT 60.682 61.111 0.00 0.00 34.09 4.35
4867 5503 3.459063 GTCGCCTTAGGGACGCCT 61.459 66.667 0.00 0.00 44.82 5.52
4904 5540 4.516195 GAGGGGGAGCGCTTCGAC 62.516 72.222 13.26 5.82 0.00 4.20
4912 5548 4.803908 CCAAAGCGGAGGGGGAGC 62.804 72.222 0.00 0.00 36.56 4.70
4913 5549 3.009115 TCCAAAGCGGAGGGGGAG 61.009 66.667 0.00 0.00 39.64 4.30
4920 5556 1.161843 GGTCGATTTTCCAAAGCGGA 58.838 50.000 7.00 0.00 44.40 5.54
4921 5557 0.179200 CGGTCGATTTTCCAAAGCGG 60.179 55.000 7.00 0.00 0.00 5.52
4922 5558 0.793104 GCGGTCGATTTTCCAAAGCG 60.793 55.000 0.54 0.54 0.00 4.68
4923 5559 0.521735 AGCGGTCGATTTTCCAAAGC 59.478 50.000 0.00 0.00 0.00 3.51
4924 5560 2.979813 CAAAGCGGTCGATTTTCCAAAG 59.020 45.455 3.79 0.00 30.80 2.77
4925 5561 2.287909 CCAAAGCGGTCGATTTTCCAAA 60.288 45.455 3.79 0.00 30.80 3.28
4926 5562 1.268352 CCAAAGCGGTCGATTTTCCAA 59.732 47.619 3.79 0.00 30.80 3.53
4927 5563 0.878416 CCAAAGCGGTCGATTTTCCA 59.122 50.000 3.79 0.00 30.80 3.53
4928 5564 0.170339 CCCAAAGCGGTCGATTTTCC 59.830 55.000 3.79 0.00 30.80 3.13
4929 5565 0.456142 GCCCAAAGCGGTCGATTTTC 60.456 55.000 3.79 0.00 30.80 2.29
4930 5566 1.584495 GCCCAAAGCGGTCGATTTT 59.416 52.632 3.79 0.00 30.80 1.82
4931 5567 3.274067 GCCCAAAGCGGTCGATTT 58.726 55.556 0.55 0.55 33.72 2.17
4949 5585 3.195698 CGCTTTGGACGCCTAGGC 61.196 66.667 24.75 24.75 37.85 3.93
4957 5593 4.770874 TAGGCGGGCGCTTTGGAC 62.771 66.667 7.64 0.00 41.60 4.02
4958 5594 4.467084 CTAGGCGGGCGCTTTGGA 62.467 66.667 7.64 0.00 41.60 3.53
5004 5640 1.446366 GCCTTACCGCCTTAGGGAG 59.554 63.158 0.00 0.00 35.02 4.30
5005 5641 2.428925 CGCCTTACCGCCTTAGGGA 61.429 63.158 0.00 0.00 35.02 4.20
5006 5642 2.108362 CGCCTTACCGCCTTAGGG 59.892 66.667 0.00 0.00 35.02 3.53
5007 5643 1.227176 GACGCCTTACCGCCTTAGG 60.227 63.158 0.00 0.00 37.30 2.69
5008 5644 1.588139 CGACGCCTTACCGCCTTAG 60.588 63.158 0.00 0.00 0.00 2.18
5009 5645 2.491152 CGACGCCTTACCGCCTTA 59.509 61.111 0.00 0.00 0.00 2.69
5021 5657 3.370061 AGTCTATGTTTTTAAGGCGACGC 59.630 43.478 12.43 12.43 0.00 5.19
5022 5658 5.445540 GGAAGTCTATGTTTTTAAGGCGACG 60.446 44.000 0.00 0.00 0.00 5.12
5023 5659 5.410439 TGGAAGTCTATGTTTTTAAGGCGAC 59.590 40.000 0.00 0.00 0.00 5.19
5024 5660 5.553123 TGGAAGTCTATGTTTTTAAGGCGA 58.447 37.500 0.00 0.00 0.00 5.54
5025 5661 5.869350 CTGGAAGTCTATGTTTTTAAGGCG 58.131 41.667 0.00 0.00 0.00 5.52
5087 5723 3.906660 CTGGAAGTACCTCGCACAA 57.093 52.632 0.00 0.00 39.86 3.33
5099 5735 3.316029 TGTTGCATTGACTGAACTGGAAG 59.684 43.478 0.00 0.00 42.29 3.46
5100 5736 3.286353 TGTTGCATTGACTGAACTGGAA 58.714 40.909 0.00 0.00 0.00 3.53
5101 5737 2.880268 CTGTTGCATTGACTGAACTGGA 59.120 45.455 0.00 0.00 0.00 3.86
5102 5738 2.620115 ACTGTTGCATTGACTGAACTGG 59.380 45.455 0.00 0.00 0.00 4.00
5103 5739 3.976793 ACTGTTGCATTGACTGAACTG 57.023 42.857 0.00 0.00 0.00 3.16
5104 5740 4.989279 AAACTGTTGCATTGACTGAACT 57.011 36.364 0.00 0.00 0.00 3.01
5105 5741 4.864247 ACAAAACTGTTGCATTGACTGAAC 59.136 37.500 9.69 0.00 0.00 3.18
5106 5742 5.070770 ACAAAACTGTTGCATTGACTGAA 57.929 34.783 9.69 0.00 0.00 3.02
5107 5743 4.717233 ACAAAACTGTTGCATTGACTGA 57.283 36.364 9.69 0.00 0.00 3.41
5108 5744 5.783100 AAACAAAACTGTTGCATTGACTG 57.217 34.783 9.69 0.00 31.64 3.51
5109 5745 6.393990 TGTAAACAAAACTGTTGCATTGACT 58.606 32.000 9.69 0.98 31.64 3.41
5110 5746 6.639671 TGTAAACAAAACTGTTGCATTGAC 57.360 33.333 9.69 2.26 31.64 3.18
5111 5747 9.190858 GATATGTAAACAAAACTGTTGCATTGA 57.809 29.630 9.69 0.44 33.53 2.57
5112 5748 8.976471 TGATATGTAAACAAAACTGTTGCATTG 58.024 29.630 11.13 0.00 33.53 2.82
5113 5749 9.709495 ATGATATGTAAACAAAACTGTTGCATT 57.291 25.926 11.13 0.00 33.53 3.56
5115 5751 9.838975 CTATGATATGTAAACAAAACTGTTGCA 57.161 29.630 0.00 0.00 31.64 4.08
5124 5760 9.715123 CGCACAAATCTATGATATGTAAACAAA 57.285 29.630 0.00 0.00 0.00 2.83
5125 5761 9.103861 TCGCACAAATCTATGATATGTAAACAA 57.896 29.630 0.00 0.00 0.00 2.83
5126 5762 8.655651 TCGCACAAATCTATGATATGTAAACA 57.344 30.769 0.00 0.00 0.00 2.83
5127 5763 8.223769 CCTCGCACAAATCTATGATATGTAAAC 58.776 37.037 0.00 0.00 0.00 2.01
5128 5764 7.931407 ACCTCGCACAAATCTATGATATGTAAA 59.069 33.333 0.00 0.00 0.00 2.01
5129 5765 7.441836 ACCTCGCACAAATCTATGATATGTAA 58.558 34.615 0.00 0.00 0.00 2.41
5130 5766 6.993079 ACCTCGCACAAATCTATGATATGTA 58.007 36.000 0.00 0.00 0.00 2.29
5131 5767 5.858381 ACCTCGCACAAATCTATGATATGT 58.142 37.500 0.00 0.00 0.00 2.29
5132 5768 7.889589 TTACCTCGCACAAATCTATGATATG 57.110 36.000 0.00 0.00 0.00 1.78
5133 5769 7.604164 CCTTTACCTCGCACAAATCTATGATAT 59.396 37.037 0.00 0.00 0.00 1.63
5134 5770 6.929049 CCTTTACCTCGCACAAATCTATGATA 59.071 38.462 0.00 0.00 0.00 2.15
5135 5771 5.760253 CCTTTACCTCGCACAAATCTATGAT 59.240 40.000 0.00 0.00 0.00 2.45
5136 5772 5.105106 TCCTTTACCTCGCACAAATCTATGA 60.105 40.000 0.00 0.00 0.00 2.15
5137 5773 5.116180 TCCTTTACCTCGCACAAATCTATG 58.884 41.667 0.00 0.00 0.00 2.23
5138 5774 5.353394 TCCTTTACCTCGCACAAATCTAT 57.647 39.130 0.00 0.00 0.00 1.98
5139 5775 4.811969 TCCTTTACCTCGCACAAATCTA 57.188 40.909 0.00 0.00 0.00 1.98
5140 5776 3.695830 TCCTTTACCTCGCACAAATCT 57.304 42.857 0.00 0.00 0.00 2.40
5141 5777 4.000988 TCTTCCTTTACCTCGCACAAATC 58.999 43.478 0.00 0.00 0.00 2.17
5142 5778 4.003648 CTCTTCCTTTACCTCGCACAAAT 58.996 43.478 0.00 0.00 0.00 2.32
5143 5779 3.181458 ACTCTTCCTTTACCTCGCACAAA 60.181 43.478 0.00 0.00 0.00 2.83
5153 5789 7.617041 ATTCACTATGCAACTCTTCCTTTAC 57.383 36.000 0.00 0.00 0.00 2.01
5241 5879 7.326968 ACGGAGGTAGTAGATGTTAACTAAC 57.673 40.000 7.22 0.21 36.36 2.34
5254 5892 7.932134 TCTTATATTATGGGACGGAGGTAGTA 58.068 38.462 0.00 0.00 0.00 1.82
5255 5893 6.797707 TCTTATATTATGGGACGGAGGTAGT 58.202 40.000 0.00 0.00 0.00 2.73
5256 5894 7.545489 GTTCTTATATTATGGGACGGAGGTAG 58.455 42.308 0.00 0.00 0.00 3.18
5257 5895 6.151648 CGTTCTTATATTATGGGACGGAGGTA 59.848 42.308 0.00 0.00 0.00 3.08
5258 5896 5.047519 CGTTCTTATATTATGGGACGGAGGT 60.048 44.000 0.00 0.00 0.00 3.85
5259 5897 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
5260 5898 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
5261 5899 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
5262 5900 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
5263 5901 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
5264 5902 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
5265 5903 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
5266 5904 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
5272 5910 9.485206 AGTGTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 0.00 0.00 0.00 0.86
5273 5911 8.876275 AGTGTAGTGTCAAAAACGTTCTTATA 57.124 30.769 0.00 0.00 0.00 0.98
5274 5912 7.781548 AGTGTAGTGTCAAAAACGTTCTTAT 57.218 32.000 0.00 0.00 0.00 1.73
5275 5913 7.975616 ACTAGTGTAGTGTCAAAAACGTTCTTA 59.024 33.333 0.00 0.00 37.69 2.10
5276 5914 6.815142 ACTAGTGTAGTGTCAAAAACGTTCTT 59.185 34.615 0.00 0.00 37.69 2.52
5277 5915 6.335777 ACTAGTGTAGTGTCAAAAACGTTCT 58.664 36.000 0.00 0.00 37.69 3.01
5278 5916 6.579491 ACTAGTGTAGTGTCAAAAACGTTC 57.421 37.500 0.00 0.00 37.69 3.95
5305 5943 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
5306 5944 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
5307 5945 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
5308 5946 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
5309 5947 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
5310 5948 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
5311 5949 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
5312 5950 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
5313 5951 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
5314 5952 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
5315 5953 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
5316 5954 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
5317 5955 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
5318 5956 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
5319 5957 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
5320 5958 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
5321 5959 4.202749 ACATATTACTCCCTCCGTCCCATA 60.203 45.833 0.00 0.00 0.00 2.74
5322 5960 3.173965 CATATTACTCCCTCCGTCCCAT 58.826 50.000 0.00 0.00 0.00 4.00
5323 5961 2.090943 ACATATTACTCCCTCCGTCCCA 60.091 50.000 0.00 0.00 0.00 4.37
5324 5962 2.606378 ACATATTACTCCCTCCGTCCC 58.394 52.381 0.00 0.00 0.00 4.46
5325 5963 5.262804 AGATACATATTACTCCCTCCGTCC 58.737 45.833 0.00 0.00 0.00 4.79
5326 5964 7.774157 TCATAGATACATATTACTCCCTCCGTC 59.226 40.741 0.00 0.00 0.00 4.79
5327 5965 7.556996 GTCATAGATACATATTACTCCCTCCGT 59.443 40.741 0.00 0.00 0.00 4.69
5328 5966 7.776030 AGTCATAGATACATATTACTCCCTCCG 59.224 40.741 0.00 0.00 0.00 4.63
5362 6000 3.052036 CAAAGGCGTGTTTCCAGATTTG 58.948 45.455 0.00 0.00 0.00 2.32
5363 6001 2.545742 GCAAAGGCGTGTTTCCAGATTT 60.546 45.455 0.00 0.00 0.00 2.17
5415 6053 9.625747 TGCAAGACATCACCTTTATTCATATTA 57.374 29.630 0.00 0.00 0.00 0.98
5429 6067 2.880890 ACAAGTTCCTGCAAGACATCAC 59.119 45.455 0.00 0.00 34.07 3.06
5593 6231 5.570589 GCTCAATTAAGCGATCCATAAATGC 59.429 40.000 0.00 0.00 31.56 3.56
5679 6317 7.214467 ACGAGCATAAAATTCAGAAAAGGAA 57.786 32.000 0.00 0.00 0.00 3.36
5739 6378 8.468399 TGTTAGCATGAAGATTGCAATTTCATA 58.532 29.630 29.05 20.08 42.62 2.15
5941 6583 5.996513 ACCAATCTTCTAGCATGCAGATAAG 59.003 40.000 21.98 16.47 0.00 1.73
5987 6629 4.037858 AGAGAACAGCAAAAACAGCAAG 57.962 40.909 0.00 0.00 0.00 4.01
6062 6705 9.030452 AGTTTGAGCATATAAAAATGGGTAACA 57.970 29.630 0.00 0.00 39.74 2.41
6089 6732 7.365741 CAAGAGTTAATGCTGAAACATGAGTT 58.634 34.615 0.00 0.00 40.40 3.01
6117 6760 6.156429 GGGCTACTTATTATAGGTATGCCAGT 59.844 42.308 22.63 0.00 36.84 4.00
6118 6761 6.408206 GGGGCTACTTATTATAGGTATGCCAG 60.408 46.154 22.63 6.92 36.84 4.85
6183 6827 6.164876 CCAATGAAAACAACCTGCATTCATA 58.835 36.000 9.26 0.00 35.96 2.15
6332 6976 3.130160 GAAAGGCCTCCTGCGCAG 61.130 66.667 30.52 30.52 42.61 5.18
6794 7438 7.706179 TCAAACCTTCTTTGCTGATGTAAAAAG 59.294 33.333 0.00 0.00 0.00 2.27
7239 7884 2.626785 TGGGACAAGACCAATGGAGTA 58.373 47.619 6.16 0.00 34.44 2.59
7558 8206 8.508875 GTTACTCCCTCGAATGATTTAAAACAA 58.491 33.333 2.00 0.00 0.00 2.83
7571 8219 5.426689 TCACTAGTAGTTACTCCCTCGAA 57.573 43.478 0.00 0.00 37.73 3.71
7573 8221 7.982761 AATATCACTAGTAGTTACTCCCTCG 57.017 40.000 0.00 0.00 37.73 4.63
7645 8293 1.980772 AGCCCAAGCATTCACCTGC 60.981 57.895 0.00 0.00 43.56 4.85
7732 8380 7.512130 TCATCAACTTAGCATCCTCATAACAT 58.488 34.615 0.00 0.00 0.00 2.71
7870 8518 7.716998 TCAATATTTCTAACAGATGGCTTCTCC 59.283 37.037 0.00 0.00 29.93 3.71
8184 8832 4.757594 ACACAACACAAAGTAGGTAACGA 58.242 39.130 0.00 0.00 46.39 3.85
8242 8891 6.378710 ACTTGAGTTTGCCTCTTCTTAAAC 57.621 37.500 0.00 0.00 41.11 2.01
8256 8930 7.444487 GTCCCTGACAGTTATAAACTTGAGTTT 59.556 37.037 13.12 13.12 40.46 2.66
8260 8934 5.568023 CGGTCCCTGACAGTTATAAACTTGA 60.568 44.000 0.93 0.00 40.46 3.02
8294 8971 2.035626 GCCTGGGCTAAGCACCAA 59.964 61.111 4.12 0.00 36.09 3.67
8325 9002 3.069729 AGCTTGGAACGAAACTACTGAGT 59.930 43.478 0.00 0.00 37.59 3.41
8329 9006 3.391049 GACAGCTTGGAACGAAACTACT 58.609 45.455 0.00 0.00 0.00 2.57
8470 9154 7.520451 AGGGTACTTTTGGATTTTGAGTTAC 57.480 36.000 0.00 0.00 0.00 2.50
8471 9155 8.417884 CAAAGGGTACTTTTGGATTTTGAGTTA 58.582 33.333 12.61 0.00 44.26 2.24
8483 9167 5.514274 TTTGAGCTCAAAGGGTACTTTTG 57.486 39.130 32.86 13.68 44.26 2.44
8574 9260 1.535462 CACCTTCGACAAATGTGACCC 59.465 52.381 0.00 0.00 36.04 4.46
8576 9262 2.032030 CCACACCTTCGACAAATGTGAC 60.032 50.000 16.02 0.00 42.63 3.67
8605 9291 3.868077 TGCAGCGCTTATTTTGTTTTTGT 59.132 34.783 7.50 0.00 0.00 2.83
8606 9292 4.449870 TGCAGCGCTTATTTTGTTTTTG 57.550 36.364 7.50 0.00 0.00 2.44
8610 9296 3.868077 TGTTTTGCAGCGCTTATTTTGTT 59.132 34.783 7.50 0.00 0.00 2.83
8619 9305 0.040067 GCTACTTGTTTTGCAGCGCT 60.040 50.000 2.64 2.64 0.00 5.92
8621 9307 2.336554 ATGCTACTTGTTTTGCAGCG 57.663 45.000 0.00 0.00 38.87 5.18
8623 9309 4.211794 CCCAAAATGCTACTTGTTTTGCAG 59.788 41.667 4.71 0.00 39.99 4.41
8631 9317 3.444742 TGATGCTCCCAAAATGCTACTTG 59.555 43.478 0.00 0.00 0.00 3.16
8632 9318 3.700538 TGATGCTCCCAAAATGCTACTT 58.299 40.909 0.00 0.00 0.00 2.24
8633 9319 3.370840 TGATGCTCCCAAAATGCTACT 57.629 42.857 0.00 0.00 0.00 2.57
8634 9320 3.382546 ACATGATGCTCCCAAAATGCTAC 59.617 43.478 0.00 0.00 0.00 3.58
8636 9322 2.463752 ACATGATGCTCCCAAAATGCT 58.536 42.857 0.00 0.00 0.00 3.79
8637 9323 2.973694 ACATGATGCTCCCAAAATGC 57.026 45.000 0.00 0.00 0.00 3.56
8638 9324 4.571919 ACAAACATGATGCTCCCAAAATG 58.428 39.130 0.00 0.00 0.00 2.32
8640 9326 4.686191 AACAAACATGATGCTCCCAAAA 57.314 36.364 0.00 0.00 0.00 2.44
8641 9327 4.686191 AAACAAACATGATGCTCCCAAA 57.314 36.364 0.00 0.00 0.00 3.28
8642 9328 4.686191 AAAACAAACATGATGCTCCCAA 57.314 36.364 0.00 0.00 0.00 4.12
8644 9330 5.581874 CCAATAAAACAAACATGATGCTCCC 59.418 40.000 0.00 0.00 0.00 4.30
8646 9332 6.867816 TGACCAATAAAACAAACATGATGCTC 59.132 34.615 0.00 0.00 0.00 4.26
8648 9334 6.423302 TGTGACCAATAAAACAAACATGATGC 59.577 34.615 0.00 0.00 0.00 3.91
8651 9337 7.551585 AGTTGTGACCAATAAAACAAACATGA 58.448 30.769 0.00 0.00 34.54 3.07
8652 9338 7.769272 AGTTGTGACCAATAAAACAAACATG 57.231 32.000 0.00 0.00 34.54 3.21
8653 9339 7.494298 GGAAGTTGTGACCAATAAAACAAACAT 59.506 33.333 0.00 0.00 34.54 2.71
8654 9340 6.814146 GGAAGTTGTGACCAATAAAACAAACA 59.186 34.615 0.00 0.00 34.54 2.83
8655 9341 6.814146 TGGAAGTTGTGACCAATAAAACAAAC 59.186 34.615 0.00 0.00 34.54 2.93
8703 9389 6.282930 ACAAATGTTCTAAGTGCTTGCAAAT 58.717 32.000 0.00 0.00 0.00 2.32
8704 9390 5.659463 ACAAATGTTCTAAGTGCTTGCAAA 58.341 33.333 0.00 0.00 0.00 3.68
8728 9414 6.232581 TCTGAATTTTTCCTTTTGGCTTCA 57.767 33.333 0.00 0.00 40.12 3.02
8772 9462 8.825745 GCTTGATGAACAATAAAACCAAAAGAA 58.174 29.630 0.00 0.00 37.88 2.52
8801 9491 3.196007 TGCAAGATTTAAAGGAACGCG 57.804 42.857 3.53 3.53 0.00 6.01
8807 9521 5.063180 TCACTGCATGCAAGATTTAAAGG 57.937 39.130 22.88 8.25 0.00 3.11
8810 9524 6.088016 AGTTTCACTGCATGCAAGATTTAA 57.912 33.333 22.88 10.85 0.00 1.52
8838 9552 4.081862 ACAATTTTGATGATCTGGCACCAG 60.082 41.667 10.60 10.60 44.86 4.00
8847 9563 6.718388 TCGTGCATAGACAATTTTGATGATC 58.282 36.000 0.00 0.00 0.00 2.92
8850 9566 7.633621 ACTATCGTGCATAGACAATTTTGATG 58.366 34.615 0.00 0.00 37.27 3.07
8855 9571 7.609760 TGAAACTATCGTGCATAGACAATTT 57.390 32.000 0.00 0.92 37.27 1.82
8867 9589 5.575606 AGTTGTCCGTAATGAAACTATCGTG 59.424 40.000 0.00 0.00 29.56 4.35
8869 9591 6.642683 AAGTTGTCCGTAATGAAACTATCG 57.357 37.500 0.00 0.00 31.09 2.92
8874 9596 8.470040 TCATACTAAGTTGTCCGTAATGAAAC 57.530 34.615 0.00 0.00 0.00 2.78
8883 9605 6.475727 CCAAGTGTATCATACTAAGTTGTCCG 59.524 42.308 0.00 0.00 0.00 4.79
8884 9606 7.328737 ACCAAGTGTATCATACTAAGTTGTCC 58.671 38.462 0.00 0.00 0.00 4.02
8887 9609 8.692710 TCCTACCAAGTGTATCATACTAAGTTG 58.307 37.037 0.00 0.00 0.00 3.16
8899 9621 4.286032 TCAAGCAACTCCTACCAAGTGTAT 59.714 41.667 0.00 0.00 0.00 2.29
8908 9630 1.443802 GCCACTCAAGCAACTCCTAC 58.556 55.000 0.00 0.00 0.00 3.18
8918 9640 2.189594 TGATGAAGTGGCCACTCAAG 57.810 50.000 37.75 0.00 41.58 3.02
8924 9646 7.118723 ACTAGATAATTTTGATGAAGTGGCCA 58.881 34.615 0.00 0.00 0.00 5.36
8928 9650 8.461222 TGCCAACTAGATAATTTTGATGAAGTG 58.539 33.333 0.00 0.00 0.00 3.16
8938 9660 8.517878 GCATCATACATGCCAACTAGATAATTT 58.482 33.333 0.00 0.00 39.01 1.82
8939 9661 7.886970 AGCATCATACATGCCAACTAGATAATT 59.113 33.333 0.00 0.00 45.59 1.40
8940 9662 7.400439 AGCATCATACATGCCAACTAGATAAT 58.600 34.615 0.00 0.00 45.59 1.28
8941 9663 6.772605 AGCATCATACATGCCAACTAGATAA 58.227 36.000 0.00 0.00 45.59 1.75
8942 9664 6.364568 AGCATCATACATGCCAACTAGATA 57.635 37.500 0.00 0.00 45.59 1.98
8943 9665 5.238624 AGCATCATACATGCCAACTAGAT 57.761 39.130 0.00 0.00 45.59 1.98
8944 9666 4.694760 AGCATCATACATGCCAACTAGA 57.305 40.909 0.00 0.00 45.59 2.43
8945 9667 4.214971 GGAAGCATCATACATGCCAACTAG 59.785 45.833 2.93 0.00 45.59 2.57
8946 9668 4.136796 GGAAGCATCATACATGCCAACTA 58.863 43.478 2.93 0.00 45.59 2.24
8947 9669 2.954318 GGAAGCATCATACATGCCAACT 59.046 45.455 2.93 0.00 45.59 3.16
8948 9670 2.689471 TGGAAGCATCATACATGCCAAC 59.311 45.455 2.93 0.00 45.59 3.77
8949 9671 3.015675 TGGAAGCATCATACATGCCAA 57.984 42.857 2.93 0.00 45.59 4.52
8950 9672 2.732844 TGGAAGCATCATACATGCCA 57.267 45.000 2.93 0.00 45.59 4.92
8951 9673 5.393787 CCATAATGGAAGCATCATACATGCC 60.394 44.000 2.93 0.00 42.21 4.40
8952 9674 5.416639 TCCATAATGGAAGCATCATACATGC 59.583 40.000 0.00 0.00 45.00 4.06
8964 9686 7.827236 TAACACTTAGGTTGTCCATAATGGAAG 59.173 37.037 0.00 0.00 39.05 3.46
8965 9687 7.691213 TAACACTTAGGTTGTCCATAATGGAA 58.309 34.615 0.00 0.00 39.05 3.53
8966 9688 5.772393 ACACTTAGGTTGTCCATAATGGA 57.228 39.130 0.00 0.00 45.98 3.41
8967 9689 7.335627 TCTAACACTTAGGTTGTCCATAATGG 58.664 38.462 0.00 0.00 34.80 3.16
8968 9690 7.011482 GCTCTAACACTTAGGTTGTCCATAATG 59.989 40.741 0.00 0.00 35.89 1.90
8969 9691 7.048512 GCTCTAACACTTAGGTTGTCCATAAT 58.951 38.462 0.00 0.00 35.89 1.28
8970 9692 6.014070 TGCTCTAACACTTAGGTTGTCCATAA 60.014 38.462 0.00 0.00 35.89 1.90
8971 9693 5.482526 TGCTCTAACACTTAGGTTGTCCATA 59.517 40.000 0.00 0.00 35.89 2.74
8972 9694 4.286032 TGCTCTAACACTTAGGTTGTCCAT 59.714 41.667 0.00 0.00 35.89 3.41
8973 9695 3.644265 TGCTCTAACACTTAGGTTGTCCA 59.356 43.478 0.00 0.00 35.89 4.02
8974 9696 4.267349 TGCTCTAACACTTAGGTTGTCC 57.733 45.455 0.00 0.00 34.00 4.02
8975 9697 6.613755 TTTTGCTCTAACACTTAGGTTGTC 57.386 37.500 0.00 0.00 34.00 3.18
8976 9698 6.770785 TCATTTTGCTCTAACACTTAGGTTGT 59.229 34.615 0.00 0.00 34.00 3.32
8977 9699 7.173218 TCTCATTTTGCTCTAACACTTAGGTTG 59.827 37.037 0.00 0.00 34.00 3.77
8978 9700 7.224297 TCTCATTTTGCTCTAACACTTAGGTT 58.776 34.615 0.00 0.00 34.00 3.50
8979 9701 6.769512 TCTCATTTTGCTCTAACACTTAGGT 58.230 36.000 0.00 0.00 34.00 3.08
8980 9702 7.856145 ATCTCATTTTGCTCTAACACTTAGG 57.144 36.000 0.00 0.00 34.00 2.69
8981 9703 8.939929 TCAATCTCATTTTGCTCTAACACTTAG 58.060 33.333 0.00 0.00 34.52 2.18
8982 9704 8.846943 TCAATCTCATTTTGCTCTAACACTTA 57.153 30.769 0.00 0.00 0.00 2.24
8983 9705 7.750229 TCAATCTCATTTTGCTCTAACACTT 57.250 32.000 0.00 0.00 0.00 3.16
8984 9706 7.750229 TTCAATCTCATTTTGCTCTAACACT 57.250 32.000 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.