Multiple sequence alignment - TraesCS4B01G165400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G165400 | chr4B | 100.000 | 7466 | 0 | 0 | 1 | 7466 | 348943845 | 348951310 | 0.000000e+00 | 13788.0 |
1 | TraesCS4B01G165400 | chr4B | 81.729 | 1122 | 137 | 31 | 4914 | 5990 | 659620267 | 659621365 | 0.000000e+00 | 874.0 |
2 | TraesCS4B01G165400 | chr4B | 82.836 | 536 | 68 | 17 | 5532 | 6052 | 68089282 | 68088756 | 6.830000e-125 | 459.0 |
3 | TraesCS4B01G165400 | chr4B | 90.000 | 200 | 18 | 2 | 7121 | 7320 | 91119027 | 91119224 | 2.670000e-64 | 257.0 |
4 | TraesCS4B01G165400 | chr4B | 90.000 | 200 | 19 | 1 | 7121 | 7320 | 448532095 | 448532293 | 2.670000e-64 | 257.0 |
5 | TraesCS4B01G165400 | chr4B | 92.982 | 57 | 4 | 0 | 7347 | 7403 | 597763128 | 597763072 | 4.800000e-12 | 84.2 |
6 | TraesCS4B01G165400 | chr4A | 95.530 | 2953 | 107 | 18 | 831 | 3762 | 384398821 | 384395873 | 0.000000e+00 | 4698.0 |
7 | TraesCS4B01G165400 | chr4A | 94.494 | 1889 | 72 | 21 | 3735 | 5598 | 384395872 | 384393991 | 0.000000e+00 | 2883.0 |
8 | TraesCS4B01G165400 | chr4A | 86.783 | 1150 | 101 | 31 | 4915 | 6049 | 57107967 | 57106854 | 0.000000e+00 | 1234.0 |
9 | TraesCS4B01G165400 | chr4A | 92.908 | 846 | 45 | 6 | 6037 | 6880 | 384393477 | 384392645 | 0.000000e+00 | 1216.0 |
10 | TraesCS4B01G165400 | chr4A | 83.190 | 1166 | 126 | 25 | 4904 | 6034 | 7110679 | 7111809 | 0.000000e+00 | 1003.0 |
11 | TraesCS4B01G165400 | chr4A | 89.583 | 528 | 39 | 11 | 5628 | 6148 | 384393998 | 384393480 | 0.000000e+00 | 656.0 |
12 | TraesCS4B01G165400 | chr4A | 89.041 | 73 | 3 | 3 | 697 | 765 | 384398894 | 384398823 | 1.330000e-12 | 86.1 |
13 | TraesCS4B01G165400 | chr4D | 95.983 | 2290 | 57 | 10 | 2527 | 4808 | 214747726 | 214749988 | 0.000000e+00 | 3687.0 |
14 | TraesCS4B01G165400 | chr4D | 96.802 | 1626 | 43 | 5 | 907 | 2529 | 214745761 | 214747380 | 0.000000e+00 | 2706.0 |
15 | TraesCS4B01G165400 | chr4D | 92.604 | 987 | 39 | 10 | 6045 | 7024 | 214751987 | 214752946 | 0.000000e+00 | 1387.0 |
16 | TraesCS4B01G165400 | chr4D | 87.405 | 1183 | 75 | 26 | 4910 | 6051 | 64359511 | 64360660 | 0.000000e+00 | 1291.0 |
17 | TraesCS4B01G165400 | chr4D | 95.218 | 711 | 29 | 2 | 4807 | 5516 | 214750150 | 214750856 | 0.000000e+00 | 1120.0 |
18 | TraesCS4B01G165400 | chr4D | 86.037 | 931 | 76 | 27 | 5160 | 6050 | 40220142 | 40221058 | 0.000000e+00 | 950.0 |
19 | TraesCS4B01G165400 | chr4D | 89.130 | 368 | 31 | 6 | 3936 | 4295 | 194331988 | 194332354 | 4.110000e-122 | 449.0 |
20 | TraesCS4B01G165400 | chr4D | 85.455 | 275 | 16 | 13 | 701 | 962 | 214745512 | 214745775 | 1.600000e-66 | 265.0 |
21 | TraesCS4B01G165400 | chr4D | 90.099 | 202 | 15 | 3 | 7121 | 7320 | 429025642 | 429025840 | 2.670000e-64 | 257.0 |
22 | TraesCS4B01G165400 | chr4D | 83.333 | 264 | 34 | 7 | 4463 | 4720 | 194332460 | 194332719 | 1.250000e-57 | 235.0 |
23 | TraesCS4B01G165400 | chr4D | 90.000 | 70 | 1 | 3 | 7403 | 7466 | 214766787 | 214766856 | 1.330000e-12 | 86.1 |
24 | TraesCS4B01G165400 | chr6D | 87.919 | 1788 | 170 | 24 | 2563 | 4324 | 3274438 | 3276205 | 0.000000e+00 | 2063.0 |
25 | TraesCS4B01G165400 | chr6D | 87.216 | 970 | 91 | 19 | 1361 | 2311 | 3273268 | 3274223 | 0.000000e+00 | 1074.0 |
26 | TraesCS4B01G165400 | chr6D | 89.175 | 388 | 33 | 4 | 4463 | 4845 | 3276284 | 3276667 | 6.780000e-130 | 475.0 |
27 | TraesCS4B01G165400 | chr6D | 88.587 | 368 | 33 | 6 | 3936 | 4295 | 79801761 | 79802127 | 8.890000e-119 | 438.0 |
28 | TraesCS4B01G165400 | chr6D | 90.361 | 249 | 23 | 1 | 6203 | 6450 | 3276861 | 3277109 | 7.220000e-85 | 326.0 |
29 | TraesCS4B01G165400 | chr6D | 92.982 | 171 | 12 | 0 | 1011 | 1181 | 3272796 | 3272966 | 4.470000e-62 | 250.0 |
30 | TraesCS4B01G165400 | chr6D | 84.091 | 264 | 32 | 7 | 4463 | 4720 | 79802233 | 79802492 | 5.790000e-61 | 246.0 |
31 | TraesCS4B01G165400 | chr6B | 87.053 | 1846 | 180 | 32 | 2500 | 4324 | 6538730 | 6540537 | 0.000000e+00 | 2030.0 |
32 | TraesCS4B01G165400 | chr6B | 88.247 | 970 | 77 | 22 | 1370 | 2311 | 6537699 | 6538659 | 0.000000e+00 | 1125.0 |
33 | TraesCS4B01G165400 | chr6B | 80.996 | 1084 | 129 | 34 | 5010 | 6052 | 172314087 | 172313040 | 0.000000e+00 | 789.0 |
34 | TraesCS4B01G165400 | chr6B | 83.686 | 662 | 81 | 11 | 5034 | 5685 | 11799667 | 11799023 | 3.860000e-167 | 599.0 |
35 | TraesCS4B01G165400 | chr6B | 88.378 | 413 | 35 | 9 | 4462 | 4866 | 6540616 | 6541023 | 1.130000e-132 | 484.0 |
36 | TraesCS4B01G165400 | chr6B | 86.025 | 322 | 33 | 8 | 6185 | 6498 | 6541225 | 6541542 | 1.200000e-87 | 335.0 |
37 | TraesCS4B01G165400 | chr6B | 83.168 | 303 | 24 | 12 | 1011 | 1297 | 6537223 | 6537514 | 1.240000e-62 | 252.0 |
38 | TraesCS4B01G165400 | chr6B | 94.737 | 57 | 3 | 0 | 7347 | 7403 | 222319486 | 222319430 | 1.030000e-13 | 89.8 |
39 | TraesCS4B01G165400 | chr6B | 90.323 | 62 | 6 | 0 | 7342 | 7403 | 539612896 | 539612835 | 1.730000e-11 | 82.4 |
40 | TraesCS4B01G165400 | chr6A | 86.823 | 1829 | 162 | 43 | 2683 | 4465 | 2063810 | 2065605 | 0.000000e+00 | 1969.0 |
41 | TraesCS4B01G165400 | chr6A | 87.906 | 678 | 61 | 11 | 1642 | 2305 | 2062828 | 2063498 | 0.000000e+00 | 778.0 |
42 | TraesCS4B01G165400 | chr6A | 88.946 | 389 | 33 | 6 | 4463 | 4846 | 2065567 | 2065950 | 8.770000e-129 | 472.0 |
43 | TraesCS4B01G165400 | chr6A | 94.565 | 276 | 15 | 0 | 1370 | 1645 | 2062525 | 2062800 | 1.930000e-115 | 427.0 |
44 | TraesCS4B01G165400 | chr6A | 88.963 | 299 | 31 | 2 | 6202 | 6498 | 2066194 | 2066492 | 1.180000e-97 | 368.0 |
45 | TraesCS4B01G165400 | chr6A | 94.286 | 175 | 10 | 0 | 1011 | 1185 | 2062021 | 2062195 | 1.230000e-67 | 268.0 |
46 | TraesCS4B01G165400 | chr6A | 89.655 | 203 | 20 | 1 | 7118 | 7320 | 307719144 | 307719345 | 2.670000e-64 | 257.0 |
47 | TraesCS4B01G165400 | chr6A | 87.200 | 125 | 14 | 2 | 2310 | 2433 | 2063539 | 2063662 | 2.810000e-29 | 141.0 |
48 | TraesCS4B01G165400 | chr7B | 87.684 | 1153 | 104 | 20 | 4913 | 6047 | 41024616 | 41025748 | 0.000000e+00 | 1308.0 |
49 | TraesCS4B01G165400 | chr7B | 84.464 | 1165 | 124 | 26 | 4929 | 6049 | 651202739 | 651201588 | 0.000000e+00 | 1096.0 |
50 | TraesCS4B01G165400 | chr7B | 86.846 | 707 | 84 | 9 | 4913 | 5614 | 329020874 | 329021576 | 0.000000e+00 | 782.0 |
51 | TraesCS4B01G165400 | chr7B | 91.500 | 200 | 15 | 2 | 7121 | 7320 | 82933444 | 82933641 | 2.650000e-69 | 274.0 |
52 | TraesCS4B01G165400 | chr7B | 78.289 | 152 | 31 | 2 | 540 | 690 | 327383317 | 327383167 | 6.170000e-16 | 97.1 |
53 | TraesCS4B01G165400 | chr7B | 94.828 | 58 | 3 | 0 | 7347 | 7404 | 159521711 | 159521768 | 2.870000e-14 | 91.6 |
54 | TraesCS4B01G165400 | chr5A | 86.332 | 1156 | 131 | 21 | 4914 | 6051 | 338391276 | 338390130 | 0.000000e+00 | 1234.0 |
55 | TraesCS4B01G165400 | chr5A | 84.078 | 1187 | 120 | 30 | 4913 | 6052 | 400486767 | 400487931 | 0.000000e+00 | 1081.0 |
56 | TraesCS4B01G165400 | chr5A | 82.683 | 820 | 86 | 26 | 5269 | 6048 | 84299631 | 84300434 | 0.000000e+00 | 676.0 |
57 | TraesCS4B01G165400 | chr3D | 85.616 | 1161 | 130 | 27 | 4910 | 6050 | 454229191 | 454230334 | 0.000000e+00 | 1184.0 |
58 | TraesCS4B01G165400 | chr3D | 83.067 | 1187 | 143 | 30 | 4912 | 6052 | 397917944 | 397916770 | 0.000000e+00 | 1026.0 |
59 | TraesCS4B01G165400 | chr3D | 88.218 | 662 | 69 | 9 | 4944 | 5600 | 505572925 | 505572268 | 0.000000e+00 | 782.0 |
60 | TraesCS4B01G165400 | chr3D | 84.457 | 534 | 63 | 9 | 166 | 685 | 128554621 | 128554094 | 6.680000e-140 | 508.0 |
61 | TraesCS4B01G165400 | chr3D | 89.402 | 368 | 30 | 6 | 3936 | 4295 | 347752057 | 347752423 | 8.830000e-124 | 455.0 |
62 | TraesCS4B01G165400 | chr3D | 83.774 | 265 | 31 | 9 | 4463 | 4720 | 347752529 | 347752788 | 2.690000e-59 | 241.0 |
63 | TraesCS4B01G165400 | chr1B | 84.602 | 1182 | 132 | 18 | 4911 | 6052 | 305345239 | 305346410 | 0.000000e+00 | 1129.0 |
64 | TraesCS4B01G165400 | chr3A | 84.535 | 1151 | 143 | 25 | 4910 | 6050 | 596360491 | 596361616 | 0.000000e+00 | 1107.0 |
65 | TraesCS4B01G165400 | chr3A | 93.740 | 639 | 28 | 5 | 1 | 636 | 732359382 | 732360011 | 0.000000e+00 | 948.0 |
66 | TraesCS4B01G165400 | chr3A | 87.941 | 680 | 47 | 14 | 16 | 692 | 57855411 | 57854764 | 0.000000e+00 | 769.0 |
67 | TraesCS4B01G165400 | chr3A | 84.328 | 268 | 38 | 4 | 432 | 697 | 738548844 | 738548579 | 7.430000e-65 | 259.0 |
68 | TraesCS4B01G165400 | chr3A | 83.955 | 268 | 39 | 4 | 432 | 697 | 738463963 | 738463698 | 3.460000e-63 | 254.0 |
69 | TraesCS4B01G165400 | chr3A | 83.955 | 268 | 39 | 4 | 432 | 697 | 738649017 | 738648752 | 3.460000e-63 | 254.0 |
70 | TraesCS4B01G165400 | chr2B | 84.683 | 1136 | 117 | 36 | 4916 | 6034 | 621547009 | 621545914 | 0.000000e+00 | 1081.0 |
71 | TraesCS4B01G165400 | chr2B | 86.392 | 485 | 55 | 7 | 220 | 698 | 546870527 | 546870048 | 3.090000e-143 | 520.0 |
72 | TraesCS4B01G165400 | chr2B | 90.196 | 204 | 19 | 1 | 7117 | 7320 | 23918417 | 23918215 | 1.600000e-66 | 265.0 |
73 | TraesCS4B01G165400 | chr7D | 84.229 | 1154 | 132 | 35 | 4933 | 6058 | 595031297 | 595030166 | 0.000000e+00 | 1077.0 |
74 | TraesCS4B01G165400 | chr7D | 89.946 | 368 | 28 | 6 | 3936 | 4295 | 67056490 | 67056124 | 4.080000e-127 | 466.0 |
75 | TraesCS4B01G165400 | chr7D | 90.500 | 200 | 18 | 1 | 7121 | 7320 | 575081178 | 575081376 | 5.740000e-66 | 263.0 |
76 | TraesCS4B01G165400 | chr7D | 83.712 | 264 | 33 | 7 | 4463 | 4720 | 67056018 | 67055759 | 2.690000e-59 | 241.0 |
77 | TraesCS4B01G165400 | chr1D | 83.990 | 1143 | 129 | 27 | 4933 | 6051 | 493705079 | 493703967 | 0.000000e+00 | 1048.0 |
78 | TraesCS4B01G165400 | chr1D | 87.179 | 702 | 84 | 6 | 4901 | 5601 | 104461478 | 104460782 | 0.000000e+00 | 793.0 |
79 | TraesCS4B01G165400 | chr1A | 92.764 | 691 | 50 | 0 | 1 | 691 | 125992819 | 125992129 | 0.000000e+00 | 1000.0 |
80 | TraesCS4B01G165400 | chr1A | 93.996 | 483 | 29 | 0 | 209 | 691 | 108759371 | 108759853 | 0.000000e+00 | 732.0 |
81 | TraesCS4B01G165400 | chr1A | 87.531 | 401 | 33 | 11 | 5659 | 6052 | 479036602 | 479036992 | 1.480000e-121 | 448.0 |
82 | TraesCS4B01G165400 | chr1A | 91.176 | 68 | 1 | 3 | 766 | 829 | 238155342 | 238155408 | 3.710000e-13 | 87.9 |
83 | TraesCS4B01G165400 | chr7A | 82.353 | 544 | 65 | 19 | 5510 | 6034 | 548588196 | 548587665 | 1.910000e-120 | 444.0 |
84 | TraesCS4B01G165400 | chr7A | 78.676 | 136 | 23 | 3 | 560 | 692 | 94259612 | 94259744 | 1.330000e-12 | 86.1 |
85 | TraesCS4B01G165400 | chr3B | 88.859 | 368 | 32 | 6 | 3936 | 4295 | 106145827 | 106146193 | 1.910000e-120 | 444.0 |
86 | TraesCS4B01G165400 | chr3B | 86.905 | 84 | 9 | 2 | 284 | 367 | 771632742 | 771632661 | 7.980000e-15 | 93.5 |
87 | TraesCS4B01G165400 | chr3B | 94.737 | 57 | 3 | 0 | 7347 | 7403 | 279509608 | 279509552 | 1.030000e-13 | 89.8 |
88 | TraesCS4B01G165400 | chr5D | 90.000 | 200 | 19 | 1 | 7121 | 7320 | 103246330 | 103246132 | 2.670000e-64 | 257.0 |
89 | TraesCS4B01G165400 | chr5D | 90.000 | 200 | 19 | 1 | 7121 | 7320 | 268552581 | 268552779 | 2.670000e-64 | 257.0 |
90 | TraesCS4B01G165400 | chr5B | 85.981 | 214 | 28 | 2 | 483 | 694 | 101763739 | 101763526 | 2.100000e-55 | 228.0 |
91 | TraesCS4B01G165400 | chr5B | 94.828 | 58 | 3 | 0 | 7348 | 7405 | 114132706 | 114132763 | 2.870000e-14 | 91.6 |
92 | TraesCS4B01G165400 | chr5B | 92.982 | 57 | 4 | 0 | 7347 | 7403 | 121301464 | 121301520 | 4.800000e-12 | 84.2 |
93 | TraesCS4B01G165400 | chr2D | 92.982 | 57 | 4 | 0 | 7347 | 7403 | 8136425 | 8136481 | 4.800000e-12 | 84.2 |
94 | TraesCS4B01G165400 | chr2A | 92.982 | 57 | 4 | 0 | 7347 | 7403 | 711853588 | 711853644 | 4.800000e-12 | 84.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G165400 | chr4B | 348943845 | 348951310 | 7465 | False | 13788.000000 | 13788 | 100.000000 | 1 | 7466 | 1 | chr4B.!!$F2 | 7465 |
1 | TraesCS4B01G165400 | chr4B | 659620267 | 659621365 | 1098 | False | 874.000000 | 874 | 81.729000 | 4914 | 5990 | 1 | chr4B.!!$F4 | 1076 |
2 | TraesCS4B01G165400 | chr4B | 68088756 | 68089282 | 526 | True | 459.000000 | 459 | 82.836000 | 5532 | 6052 | 1 | chr4B.!!$R1 | 520 |
3 | TraesCS4B01G165400 | chr4A | 384392645 | 384398894 | 6249 | True | 1907.820000 | 4698 | 92.311200 | 697 | 6880 | 5 | chr4A.!!$R2 | 6183 |
4 | TraesCS4B01G165400 | chr4A | 57106854 | 57107967 | 1113 | True | 1234.000000 | 1234 | 86.783000 | 4915 | 6049 | 1 | chr4A.!!$R1 | 1134 |
5 | TraesCS4B01G165400 | chr4A | 7110679 | 7111809 | 1130 | False | 1003.000000 | 1003 | 83.190000 | 4904 | 6034 | 1 | chr4A.!!$F1 | 1130 |
6 | TraesCS4B01G165400 | chr4D | 214745512 | 214752946 | 7434 | False | 1833.000000 | 3687 | 93.212400 | 701 | 7024 | 5 | chr4D.!!$F6 | 6323 |
7 | TraesCS4B01G165400 | chr4D | 64359511 | 64360660 | 1149 | False | 1291.000000 | 1291 | 87.405000 | 4910 | 6051 | 1 | chr4D.!!$F2 | 1141 |
8 | TraesCS4B01G165400 | chr4D | 40220142 | 40221058 | 916 | False | 950.000000 | 950 | 86.037000 | 5160 | 6050 | 1 | chr4D.!!$F1 | 890 |
9 | TraesCS4B01G165400 | chr4D | 194331988 | 194332719 | 731 | False | 342.000000 | 449 | 86.231500 | 3936 | 4720 | 2 | chr4D.!!$F5 | 784 |
10 | TraesCS4B01G165400 | chr6D | 3272796 | 3277109 | 4313 | False | 837.600000 | 2063 | 89.530600 | 1011 | 6450 | 5 | chr6D.!!$F1 | 5439 |
11 | TraesCS4B01G165400 | chr6D | 79801761 | 79802492 | 731 | False | 342.000000 | 438 | 86.339000 | 3936 | 4720 | 2 | chr6D.!!$F2 | 784 |
12 | TraesCS4B01G165400 | chr6B | 6537223 | 6541542 | 4319 | False | 845.200000 | 2030 | 86.574200 | 1011 | 6498 | 5 | chr6B.!!$F1 | 5487 |
13 | TraesCS4B01G165400 | chr6B | 172313040 | 172314087 | 1047 | True | 789.000000 | 789 | 80.996000 | 5010 | 6052 | 1 | chr6B.!!$R2 | 1042 |
14 | TraesCS4B01G165400 | chr6B | 11799023 | 11799667 | 644 | True | 599.000000 | 599 | 83.686000 | 5034 | 5685 | 1 | chr6B.!!$R1 | 651 |
15 | TraesCS4B01G165400 | chr6A | 2062021 | 2066492 | 4471 | False | 631.857143 | 1969 | 89.812714 | 1011 | 6498 | 7 | chr6A.!!$F2 | 5487 |
16 | TraesCS4B01G165400 | chr7B | 41024616 | 41025748 | 1132 | False | 1308.000000 | 1308 | 87.684000 | 4913 | 6047 | 1 | chr7B.!!$F1 | 1134 |
17 | TraesCS4B01G165400 | chr7B | 651201588 | 651202739 | 1151 | True | 1096.000000 | 1096 | 84.464000 | 4929 | 6049 | 1 | chr7B.!!$R2 | 1120 |
18 | TraesCS4B01G165400 | chr7B | 329020874 | 329021576 | 702 | False | 782.000000 | 782 | 86.846000 | 4913 | 5614 | 1 | chr7B.!!$F4 | 701 |
19 | TraesCS4B01G165400 | chr5A | 338390130 | 338391276 | 1146 | True | 1234.000000 | 1234 | 86.332000 | 4914 | 6051 | 1 | chr5A.!!$R1 | 1137 |
20 | TraesCS4B01G165400 | chr5A | 400486767 | 400487931 | 1164 | False | 1081.000000 | 1081 | 84.078000 | 4913 | 6052 | 1 | chr5A.!!$F2 | 1139 |
21 | TraesCS4B01G165400 | chr5A | 84299631 | 84300434 | 803 | False | 676.000000 | 676 | 82.683000 | 5269 | 6048 | 1 | chr5A.!!$F1 | 779 |
22 | TraesCS4B01G165400 | chr3D | 454229191 | 454230334 | 1143 | False | 1184.000000 | 1184 | 85.616000 | 4910 | 6050 | 1 | chr3D.!!$F1 | 1140 |
23 | TraesCS4B01G165400 | chr3D | 397916770 | 397917944 | 1174 | True | 1026.000000 | 1026 | 83.067000 | 4912 | 6052 | 1 | chr3D.!!$R2 | 1140 |
24 | TraesCS4B01G165400 | chr3D | 505572268 | 505572925 | 657 | True | 782.000000 | 782 | 88.218000 | 4944 | 5600 | 1 | chr3D.!!$R3 | 656 |
25 | TraesCS4B01G165400 | chr3D | 128554094 | 128554621 | 527 | True | 508.000000 | 508 | 84.457000 | 166 | 685 | 1 | chr3D.!!$R1 | 519 |
26 | TraesCS4B01G165400 | chr3D | 347752057 | 347752788 | 731 | False | 348.000000 | 455 | 86.588000 | 3936 | 4720 | 2 | chr3D.!!$F2 | 784 |
27 | TraesCS4B01G165400 | chr1B | 305345239 | 305346410 | 1171 | False | 1129.000000 | 1129 | 84.602000 | 4911 | 6052 | 1 | chr1B.!!$F1 | 1141 |
28 | TraesCS4B01G165400 | chr3A | 596360491 | 596361616 | 1125 | False | 1107.000000 | 1107 | 84.535000 | 4910 | 6050 | 1 | chr3A.!!$F1 | 1140 |
29 | TraesCS4B01G165400 | chr3A | 732359382 | 732360011 | 629 | False | 948.000000 | 948 | 93.740000 | 1 | 636 | 1 | chr3A.!!$F2 | 635 |
30 | TraesCS4B01G165400 | chr3A | 57854764 | 57855411 | 647 | True | 769.000000 | 769 | 87.941000 | 16 | 692 | 1 | chr3A.!!$R1 | 676 |
31 | TraesCS4B01G165400 | chr2B | 621545914 | 621547009 | 1095 | True | 1081.000000 | 1081 | 84.683000 | 4916 | 6034 | 1 | chr2B.!!$R3 | 1118 |
32 | TraesCS4B01G165400 | chr7D | 595030166 | 595031297 | 1131 | True | 1077.000000 | 1077 | 84.229000 | 4933 | 6058 | 1 | chr7D.!!$R1 | 1125 |
33 | TraesCS4B01G165400 | chr7D | 67055759 | 67056490 | 731 | True | 353.500000 | 466 | 86.829000 | 3936 | 4720 | 2 | chr7D.!!$R2 | 784 |
34 | TraesCS4B01G165400 | chr1D | 493703967 | 493705079 | 1112 | True | 1048.000000 | 1048 | 83.990000 | 4933 | 6051 | 1 | chr1D.!!$R2 | 1118 |
35 | TraesCS4B01G165400 | chr1D | 104460782 | 104461478 | 696 | True | 793.000000 | 793 | 87.179000 | 4901 | 5601 | 1 | chr1D.!!$R1 | 700 |
36 | TraesCS4B01G165400 | chr1A | 125992129 | 125992819 | 690 | True | 1000.000000 | 1000 | 92.764000 | 1 | 691 | 1 | chr1A.!!$R1 | 690 |
37 | TraesCS4B01G165400 | chr7A | 548587665 | 548588196 | 531 | True | 444.000000 | 444 | 82.353000 | 5510 | 6034 | 1 | chr7A.!!$R1 | 524 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
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Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
808 | 855 | 0.249398 | AACAGGTCCGGTATCAGCAC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 | F |
1699 | 2055 | 0.448990 | CTGTCATGTGATTGTGGGCG | 59.551 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 | F |
1904 | 2265 | 1.406341 | GCTAATCCGTGCCACCTTACA | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 | F |
2006 | 2372 | 2.375174 | TCAGGCCTGTATCCAAGTTTGT | 59.625 | 45.455 | 31.58 | 0.00 | 0.00 | 2.83 | F |
3769 | 4673 | 0.532640 | TGCTTGCTCAACGCTCTTGA | 60.533 | 50.000 | 0.00 | 0.00 | 40.11 | 3.02 | F |
4048 | 4960 | 2.040178 | GACAGTCGGATTATCCCTGGT | 58.960 | 52.381 | 17.58 | 7.17 | 32.30 | 4.00 | F |
4259 | 5174 | 3.056678 | TGCATTTCCAGTACAATGGCAAG | 60.057 | 43.478 | 0.00 | 0.00 | 40.41 | 4.01 | F |
4883 | 6020 | 4.686972 | TGCTTGTAGCTAGTAGCAATCTG | 58.313 | 43.478 | 23.77 | 11.53 | 45.56 | 2.90 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2006 | 2372 | 1.710816 | AGTTTGCCGGATTTTTGGGA | 58.289 | 45.000 | 5.05 | 0.0 | 0.00 | 4.37 | R |
3134 | 3996 | 0.953727 | TCAAGCTGCACAACATCACC | 59.046 | 50.000 | 1.02 | 0.0 | 0.00 | 4.02 | R |
3686 | 4554 | 1.247567 | CACCGCCAATTTCTTCCACT | 58.752 | 50.000 | 0.00 | 0.0 | 0.00 | 4.00 | R |
3955 | 4861 | 5.529581 | TCAGACGATAATGGAGCATTACA | 57.470 | 39.130 | 0.00 | 0.0 | 38.83 | 2.41 | R |
4635 | 5608 | 2.270352 | AGTCCGGCATTTTCAGACAA | 57.730 | 45.000 | 0.00 | 0.0 | 0.00 | 3.18 | R |
4939 | 6077 | 2.759795 | GCCCAACCTCCTTCAGCT | 59.240 | 61.111 | 0.00 | 0.0 | 0.00 | 4.24 | R |
5600 | 7439 | 5.823861 | AATTCCTGGTGGCAATTTTAGTT | 57.176 | 34.783 | 0.00 | 0.0 | 0.00 | 2.24 | R |
6833 | 8955 | 0.385473 | CGACGGGCAAACACATTGTC | 60.385 | 55.000 | 0.00 | 0.0 | 43.10 | 3.18 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
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Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
100 | 101 | 3.302347 | CTTCCTCCGCGCTGTCCTT | 62.302 | 63.158 | 5.56 | 0.00 | 0.00 | 3.36 |
139 | 140 | 0.449388 | CTCGTCAATTGGCTTCAGGC | 59.551 | 55.000 | 8.67 | 0.00 | 41.50 | 4.85 |
251 | 255 | 0.736053 | GTGCCAACAACGGTTCTTGA | 59.264 | 50.000 | 9.99 | 0.00 | 34.21 | 3.02 |
289 | 305 | 8.717821 | GTTCTGTCTATTTGTACATGCTTGTTA | 58.282 | 33.333 | 10.85 | 0.00 | 37.28 | 2.41 |
360 | 376 | 5.620417 | CCTTTTGCAATTGTAAATTTGTGCG | 59.380 | 36.000 | 20.26 | 5.69 | 34.73 | 5.34 |
430 | 446 | 8.027440 | TGTGAAGCAAATTACAAATTATTGGC | 57.973 | 30.769 | 0.00 | 0.00 | 41.01 | 4.52 |
500 | 516 | 9.545105 | TGCTTCTCAAAATACAATCAATTTTGT | 57.455 | 25.926 | 16.53 | 1.41 | 46.84 | 2.83 |
595 | 612 | 3.245122 | ACGTAACCATTCCATTCCACCTT | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
615 | 632 | 8.788806 | CCACCTTGTTATTCATACTAAACACAA | 58.211 | 33.333 | 0.00 | 0.00 | 31.92 | 3.33 |
654 | 672 | 4.035612 | TCCCATGGAACGAAACCATTAA | 57.964 | 40.909 | 15.22 | 0.00 | 44.51 | 1.40 |
692 | 710 | 1.286553 | TCCTGAACCAAACACACCCTT | 59.713 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
693 | 711 | 2.510382 | TCCTGAACCAAACACACCCTTA | 59.490 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
694 | 712 | 2.621526 | CCTGAACCAAACACACCCTTAC | 59.378 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
695 | 713 | 3.283751 | CTGAACCAAACACACCCTTACA | 58.716 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
696 | 714 | 3.697045 | CTGAACCAAACACACCCTTACAA | 59.303 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
697 | 715 | 3.444388 | TGAACCAAACACACCCTTACAAC | 59.556 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
698 | 716 | 3.088789 | ACCAAACACACCCTTACAACA | 57.911 | 42.857 | 0.00 | 0.00 | 0.00 | 3.33 |
699 | 717 | 2.756207 | ACCAAACACACCCTTACAACAC | 59.244 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
769 | 790 | 1.987807 | ATCGGCCCATTCAGACCTGG | 61.988 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
795 | 842 | 3.570912 | CCAATCGGGGTTATAACAGGT | 57.429 | 47.619 | 17.16 | 1.85 | 0.00 | 4.00 |
796 | 843 | 3.473625 | CCAATCGGGGTTATAACAGGTC | 58.526 | 50.000 | 17.16 | 0.00 | 0.00 | 3.85 |
797 | 844 | 3.473625 | CAATCGGGGTTATAACAGGTCC | 58.526 | 50.000 | 17.16 | 8.72 | 0.00 | 4.46 |
798 | 845 | 1.113788 | TCGGGGTTATAACAGGTCCG | 58.886 | 55.000 | 21.89 | 21.89 | 37.61 | 4.79 |
801 | 848 | 2.397597 | GGGGTTATAACAGGTCCGGTA | 58.602 | 52.381 | 17.16 | 0.00 | 0.00 | 4.02 |
802 | 849 | 2.974794 | GGGGTTATAACAGGTCCGGTAT | 59.025 | 50.000 | 17.16 | 0.00 | 0.00 | 2.73 |
804 | 851 | 3.642848 | GGGTTATAACAGGTCCGGTATCA | 59.357 | 47.826 | 17.16 | 0.00 | 0.00 | 2.15 |
805 | 852 | 4.262335 | GGGTTATAACAGGTCCGGTATCAG | 60.262 | 50.000 | 17.16 | 0.00 | 0.00 | 2.90 |
806 | 853 | 4.304939 | GTTATAACAGGTCCGGTATCAGC | 58.695 | 47.826 | 10.81 | 0.00 | 0.00 | 4.26 |
807 | 854 | 1.855295 | TAACAGGTCCGGTATCAGCA | 58.145 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
808 | 855 | 0.249398 | AACAGGTCCGGTATCAGCAC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
809 | 856 | 1.144057 | CAGGTCCGGTATCAGCACC | 59.856 | 63.158 | 0.00 | 0.00 | 35.04 | 5.01 |
815 | 862 | 4.559502 | GGTATCAGCACCGCCAAT | 57.440 | 55.556 | 0.00 | 0.00 | 0.00 | 3.16 |
816 | 863 | 2.321213 | GGTATCAGCACCGCCAATC | 58.679 | 57.895 | 0.00 | 0.00 | 0.00 | 2.67 |
817 | 864 | 1.498865 | GGTATCAGCACCGCCAATCG | 61.499 | 60.000 | 0.00 | 0.00 | 38.08 | 3.34 |
818 | 865 | 0.810031 | GTATCAGCACCGCCAATCGT | 60.810 | 55.000 | 0.00 | 0.00 | 36.19 | 3.73 |
819 | 866 | 0.809636 | TATCAGCACCGCCAATCGTG | 60.810 | 55.000 | 0.00 | 0.00 | 36.19 | 4.35 |
820 | 867 | 2.803155 | ATCAGCACCGCCAATCGTGT | 62.803 | 55.000 | 0.00 | 0.00 | 36.19 | 4.49 |
821 | 868 | 2.281484 | AGCACCGCCAATCGTGTT | 60.281 | 55.556 | 0.00 | 0.00 | 36.19 | 3.32 |
822 | 869 | 2.126888 | GCACCGCCAATCGTGTTG | 60.127 | 61.111 | 0.00 | 0.00 | 36.19 | 3.33 |
823 | 870 | 2.560861 | CACCGCCAATCGTGTTGG | 59.439 | 61.111 | 15.09 | 15.09 | 42.37 | 3.77 |
824 | 871 | 2.112297 | ACCGCCAATCGTGTTGGT | 59.888 | 55.556 | 18.73 | 3.28 | 41.53 | 3.67 |
825 | 872 | 0.951525 | CACCGCCAATCGTGTTGGTA | 60.952 | 55.000 | 18.73 | 0.00 | 41.53 | 3.25 |
826 | 873 | 0.952010 | ACCGCCAATCGTGTTGGTAC | 60.952 | 55.000 | 18.73 | 6.91 | 41.53 | 3.34 |
827 | 874 | 1.418367 | CGCCAATCGTGTTGGTACG | 59.582 | 57.895 | 18.73 | 12.94 | 44.98 | 3.67 |
828 | 875 | 1.791662 | GCCAATCGTGTTGGTACGG | 59.208 | 57.895 | 18.73 | 0.00 | 43.85 | 4.02 |
829 | 876 | 1.641123 | GCCAATCGTGTTGGTACGGG | 61.641 | 60.000 | 18.73 | 0.00 | 43.85 | 5.28 |
847 | 894 | 1.678970 | GGCATCCAGTGGACCAACC | 60.679 | 63.158 | 15.86 | 9.87 | 32.98 | 3.77 |
855 | 902 | 3.636231 | TGGACCAACCAGGCCGAG | 61.636 | 66.667 | 0.00 | 0.00 | 44.64 | 4.63 |
859 | 906 | 2.180159 | GACCAACCAGGCCGAGCTTA | 62.180 | 60.000 | 0.00 | 0.00 | 43.14 | 3.09 |
968 | 1058 | 4.489771 | CCGGCCACCACCAGATCC | 62.490 | 72.222 | 2.24 | 0.00 | 0.00 | 3.36 |
1185 | 1282 | 4.025401 | GCCGCGGTTTGGTCAGTG | 62.025 | 66.667 | 28.70 | 0.00 | 0.00 | 3.66 |
1550 | 1867 | 3.914426 | AACCTCACCATATCTTTCGCT | 57.086 | 42.857 | 0.00 | 0.00 | 0.00 | 4.93 |
1699 | 2055 | 0.448990 | CTGTCATGTGATTGTGGGCG | 59.551 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1771 | 2132 | 5.070313 | GGATGATCTAGTTGAGAAAGGCTCT | 59.930 | 44.000 | 0.00 | 0.00 | 44.27 | 4.09 |
1904 | 2265 | 1.406341 | GCTAATCCGTGCCACCTTACA | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
2006 | 2372 | 2.375174 | TCAGGCCTGTATCCAAGTTTGT | 59.625 | 45.455 | 31.58 | 0.00 | 0.00 | 2.83 |
2010 | 2376 | 2.554344 | GCCTGTATCCAAGTTTGTCCCA | 60.554 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2090 | 2456 | 4.762251 | GGCCTTCACAATTCTTCTGTAGTT | 59.238 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2393 | 2801 | 9.921637 | AAGTTTTCAGTAACTCAAAATTGAACA | 57.078 | 25.926 | 0.00 | 0.00 | 37.37 | 3.18 |
2561 | 3403 | 5.520649 | GCTTAGTTGGTGTTCTGTAGCTATC | 59.479 | 44.000 | 0.00 | 0.00 | 0.00 | 2.08 |
2615 | 3459 | 6.888632 | CCTGGATGGCTTATATGAGCTTTTAT | 59.111 | 38.462 | 17.97 | 8.57 | 42.32 | 1.40 |
2678 | 3524 | 5.355071 | TGATCATGGACTGCTGTTTATTGTC | 59.645 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2682 | 3528 | 7.112122 | TCATGGACTGCTGTTTATTGTCTAAT | 58.888 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
2684 | 3530 | 8.892723 | CATGGACTGCTGTTTATTGTCTAATTA | 58.107 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2685 | 3531 | 8.263940 | TGGACTGCTGTTTATTGTCTAATTAC | 57.736 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
2781 | 3637 | 8.122330 | ACTGTTACATTATTGTACAATGATGCG | 58.878 | 33.333 | 35.35 | 25.09 | 44.07 | 4.73 |
2791 | 3647 | 2.632377 | ACAATGATGCGGTCCTGTTAG | 58.368 | 47.619 | 0.00 | 0.00 | 0.00 | 2.34 |
2858 | 3714 | 3.699038 | TGTAACCCCTCTTTTATGCATGC | 59.301 | 43.478 | 11.82 | 11.82 | 0.00 | 4.06 |
2861 | 3717 | 3.444029 | ACCCCTCTTTTATGCATGCTTT | 58.556 | 40.909 | 20.33 | 9.09 | 0.00 | 3.51 |
2909 | 3765 | 6.280855 | GGTACCTGCCATTGTTCTAATTTT | 57.719 | 37.500 | 4.06 | 0.00 | 0.00 | 1.82 |
3296 | 4158 | 4.300803 | ACGTTACAAGTCAGTATTTCGCA | 58.699 | 39.130 | 0.00 | 0.00 | 0.00 | 5.10 |
3302 | 4164 | 6.648725 | ACAAGTCAGTATTTCGCATCTTAC | 57.351 | 37.500 | 0.00 | 0.00 | 0.00 | 2.34 |
3309 | 4171 | 7.636359 | GTCAGTATTTCGCATCTTACATGAAAC | 59.364 | 37.037 | 0.00 | 0.00 | 32.02 | 2.78 |
3686 | 4554 | 6.544928 | TTAGGATATGCAGACTCTGTTTCA | 57.455 | 37.500 | 7.89 | 0.00 | 33.43 | 2.69 |
3764 | 4668 | 2.129607 | CATTTTTGCTTGCTCAACGCT | 58.870 | 42.857 | 0.00 | 0.00 | 40.11 | 5.07 |
3769 | 4673 | 0.532640 | TGCTTGCTCAACGCTCTTGA | 60.533 | 50.000 | 0.00 | 0.00 | 40.11 | 3.02 |
3951 | 4855 | 4.344679 | ACCAATCTCCTTGCATTGTTTTGA | 59.655 | 37.500 | 0.00 | 0.00 | 33.20 | 2.69 |
3955 | 4861 | 7.040961 | CCAATCTCCTTGCATTGTTTTGATTTT | 60.041 | 33.333 | 0.00 | 0.00 | 33.20 | 1.82 |
4008 | 4920 | 8.564574 | TGAAATGTTATCTAACTGTTGGTGTTC | 58.435 | 33.333 | 2.69 | 0.32 | 37.12 | 3.18 |
4048 | 4960 | 2.040178 | GACAGTCGGATTATCCCTGGT | 58.960 | 52.381 | 17.58 | 7.17 | 32.30 | 4.00 |
4259 | 5174 | 3.056678 | TGCATTTCCAGTACAATGGCAAG | 60.057 | 43.478 | 0.00 | 0.00 | 40.41 | 4.01 |
4369 | 5308 | 7.309805 | GGGCCTTTTTGTTATCTAGAATGTGTT | 60.310 | 37.037 | 0.84 | 0.00 | 0.00 | 3.32 |
4459 | 5424 | 8.717821 | TGTGAACTGTGTTCTTGCTATAATTAC | 58.282 | 33.333 | 11.06 | 0.00 | 0.00 | 1.89 |
4635 | 5608 | 6.888105 | AGTTTTGAAATGGTTCCAAGAACAT | 58.112 | 32.000 | 9.50 | 0.00 | 32.28 | 2.71 |
4799 | 5772 | 8.456904 | TCTATGTTACAAAGTAAGCGTTACTG | 57.543 | 34.615 | 10.00 | 4.38 | 45.33 | 2.74 |
4883 | 6020 | 4.686972 | TGCTTGTAGCTAGTAGCAATCTG | 58.313 | 43.478 | 23.77 | 11.53 | 45.56 | 2.90 |
5261 | 6433 | 6.089820 | GTGTTTACATTGAAGTTGCCATGATG | 59.910 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
5386 | 6566 | 6.993308 | TGCCATGATCCATGAAATAATTTTGG | 59.007 | 34.615 | 8.38 | 0.00 | 43.81 | 3.28 |
5476 | 6657 | 6.418057 | TTTGCCATGAACCAGAAACTAAAT | 57.582 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
5600 | 7439 | 9.868277 | CCATGGTCAAAATACTAAAATTGCTAA | 57.132 | 29.630 | 2.57 | 0.00 | 0.00 | 3.09 |
5613 | 7452 | 9.771534 | ACTAAAATTGCTAAACTAAAATTGCCA | 57.228 | 25.926 | 0.00 | 0.00 | 0.00 | 4.92 |
5615 | 7454 | 7.433708 | AAATTGCTAAACTAAAATTGCCACC | 57.566 | 32.000 | 0.00 | 0.00 | 0.00 | 4.61 |
5616 | 7455 | 5.537300 | TTGCTAAACTAAAATTGCCACCA | 57.463 | 34.783 | 0.00 | 0.00 | 0.00 | 4.17 |
5617 | 7456 | 5.132897 | TGCTAAACTAAAATTGCCACCAG | 57.867 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
5618 | 7457 | 4.021544 | TGCTAAACTAAAATTGCCACCAGG | 60.022 | 41.667 | 0.00 | 0.00 | 38.23 | 4.45 |
5619 | 7458 | 4.219725 | GCTAAACTAAAATTGCCACCAGGA | 59.780 | 41.667 | 0.00 | 0.00 | 36.89 | 3.86 |
5620 | 7459 | 5.279256 | GCTAAACTAAAATTGCCACCAGGAA | 60.279 | 40.000 | 0.00 | 0.00 | 36.89 | 3.36 |
5621 | 7460 | 5.823861 | AAACTAAAATTGCCACCAGGAAT | 57.176 | 34.783 | 0.00 | 0.00 | 36.89 | 3.01 |
5622 | 7461 | 5.823861 | AACTAAAATTGCCACCAGGAATT | 57.176 | 34.783 | 0.00 | 0.00 | 36.89 | 2.17 |
5623 | 7462 | 6.926630 | AACTAAAATTGCCACCAGGAATTA | 57.073 | 33.333 | 0.00 | 0.00 | 36.89 | 1.40 |
5624 | 7463 | 7.494922 | AACTAAAATTGCCACCAGGAATTAT | 57.505 | 32.000 | 0.00 | 0.00 | 36.89 | 1.28 |
5625 | 7464 | 7.494922 | ACTAAAATTGCCACCAGGAATTATT | 57.505 | 32.000 | 0.00 | 0.00 | 36.89 | 1.40 |
5626 | 7465 | 8.602472 | ACTAAAATTGCCACCAGGAATTATTA | 57.398 | 30.769 | 0.00 | 0.00 | 36.89 | 0.98 |
5627 | 7466 | 9.041354 | ACTAAAATTGCCACCAGGAATTATTAA | 57.959 | 29.630 | 0.00 | 0.00 | 36.89 | 1.40 |
5628 | 7467 | 9.883142 | CTAAAATTGCCACCAGGAATTATTAAA | 57.117 | 29.630 | 0.00 | 0.00 | 36.89 | 1.52 |
5630 | 7469 | 9.579932 | AAAATTGCCACCAGGAATTATTAAAAA | 57.420 | 25.926 | 0.00 | 0.00 | 36.89 | 1.94 |
5809 | 7749 | 1.133199 | TCATGGCAACTTTTGACCCCT | 60.133 | 47.619 | 0.00 | 0.00 | 38.13 | 4.79 |
5907 | 7866 | 9.396938 | GAAACGGATTTTTAGTCGGAATTTTTA | 57.603 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
5908 | 7867 | 9.917129 | AAACGGATTTTTAGTCGGAATTTTTAT | 57.083 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
5958 | 7919 | 8.138074 | AGTCTGAAAAACTAAAAAGATTCTGCC | 58.862 | 33.333 | 0.00 | 0.00 | 0.00 | 4.85 |
6097 | 8174 | 5.478233 | TGATATTGCGAAAATGCTACGTT | 57.522 | 34.783 | 0.00 | 0.00 | 35.36 | 3.99 |
6102 | 8179 | 3.327626 | TGCGAAAATGCTACGTTAAGGA | 58.672 | 40.909 | 1.43 | 0.00 | 35.36 | 3.36 |
6115 | 8192 | 6.690528 | GCTACGTTAAGGAGTCTTGTACATAC | 59.309 | 42.308 | 0.00 | 0.00 | 34.59 | 2.39 |
6120 | 8197 | 4.993029 | AGGAGTCTTGTACATACTCTGC | 57.007 | 45.455 | 25.96 | 16.56 | 39.65 | 4.26 |
6136 | 8216 | 8.545472 | ACATACTCTGCTTTTTATACCCAGTTA | 58.455 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
6453 | 8573 | 1.536174 | CCCCCAACAAGGTGGCATT | 60.536 | 57.895 | 0.00 | 0.00 | 37.34 | 3.56 |
6512 | 8633 | 4.398988 | GTGTATCATGCTGTGGGATTTTCA | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
6570 | 8691 | 9.449719 | AGGTTCAATTCGAGTAATAGATTTTGT | 57.550 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
6585 | 8706 | 4.590222 | AGATTTTGTCTGCTTGGGTTTCAT | 59.410 | 37.500 | 0.00 | 0.00 | 35.31 | 2.57 |
6592 | 8713 | 0.320683 | GCTTGGGTTTCATGGTTGGC | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
6632 | 8753 | 2.161410 | TGATGTCTTGCGGTGTATTTGC | 59.839 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
6685 | 8807 | 9.019656 | GGTGTATCACATGATAACTAGAGAGAT | 57.980 | 37.037 | 0.00 | 0.00 | 38.60 | 2.75 |
6726 | 8848 | 2.639065 | ACGAACCAAAGCTTGTCTTGA | 58.361 | 42.857 | 0.00 | 0.00 | 34.67 | 3.02 |
6759 | 8881 | 9.915629 | TTGTTTGTAAAATTCTGTTGTGTTAGT | 57.084 | 25.926 | 0.00 | 0.00 | 0.00 | 2.24 |
6833 | 8955 | 2.223876 | ACATTTTGCAGAGTGTTGCTGG | 60.224 | 45.455 | 0.00 | 0.00 | 44.38 | 4.85 |
6854 | 8976 | 1.896660 | AATGTGTTTGCCCGTCGCT | 60.897 | 52.632 | 0.00 | 0.00 | 38.78 | 4.93 |
6857 | 8979 | 1.957186 | GTGTTTGCCCGTCGCTGTA | 60.957 | 57.895 | 0.00 | 0.00 | 38.78 | 2.74 |
6859 | 8981 | 0.246910 | TGTTTGCCCGTCGCTGTATA | 59.753 | 50.000 | 0.00 | 0.00 | 38.78 | 1.47 |
6870 | 8992 | 4.537015 | CGTCGCTGTATATTCATGTGAGA | 58.463 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
6918 | 9042 | 5.927115 | ACTAACTTAGTGCTGTTGCTTCTAC | 59.073 | 40.000 | 0.33 | 0.00 | 37.69 | 2.59 |
6936 | 9065 | 2.468532 | ACGTATAAAATTGCTGCGGC | 57.531 | 45.000 | 11.65 | 11.65 | 39.26 | 6.53 |
6957 | 9086 | 3.441572 | GCAAACTGACATGAACTAGCCAT | 59.558 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
6958 | 9087 | 4.082571 | GCAAACTGACATGAACTAGCCATT | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
6970 | 9099 | 5.363292 | TGAACTAGCCATTACGGTTGGTATA | 59.637 | 40.000 | 1.13 | 0.00 | 38.83 | 1.47 |
7024 | 9153 | 4.523173 | TGACAGGTCGAGTTACTCAGATTT | 59.477 | 41.667 | 13.14 | 1.66 | 0.00 | 2.17 |
7025 | 9154 | 4.810790 | ACAGGTCGAGTTACTCAGATTTG | 58.189 | 43.478 | 13.14 | 13.25 | 0.00 | 2.32 |
7026 | 9155 | 4.177026 | CAGGTCGAGTTACTCAGATTTGG | 58.823 | 47.826 | 13.14 | 0.00 | 0.00 | 3.28 |
7027 | 9156 | 4.082190 | CAGGTCGAGTTACTCAGATTTGGA | 60.082 | 45.833 | 13.14 | 0.00 | 0.00 | 3.53 |
7028 | 9157 | 4.527038 | AGGTCGAGTTACTCAGATTTGGAA | 59.473 | 41.667 | 13.14 | 0.00 | 0.00 | 3.53 |
7029 | 9158 | 4.865365 | GGTCGAGTTACTCAGATTTGGAAG | 59.135 | 45.833 | 13.14 | 0.00 | 0.00 | 3.46 |
7030 | 9159 | 5.471257 | GTCGAGTTACTCAGATTTGGAAGT | 58.529 | 41.667 | 13.14 | 0.00 | 0.00 | 3.01 |
7031 | 9160 | 6.349944 | GGTCGAGTTACTCAGATTTGGAAGTA | 60.350 | 42.308 | 13.14 | 0.00 | 0.00 | 2.24 |
7032 | 9161 | 6.527372 | GTCGAGTTACTCAGATTTGGAAGTAC | 59.473 | 42.308 | 13.14 | 0.00 | 0.00 | 2.73 |
7033 | 9162 | 6.433404 | TCGAGTTACTCAGATTTGGAAGTACT | 59.567 | 38.462 | 13.14 | 0.00 | 0.00 | 2.73 |
7034 | 9163 | 6.528423 | CGAGTTACTCAGATTTGGAAGTACTG | 59.472 | 42.308 | 13.14 | 0.00 | 0.00 | 2.74 |
7035 | 9164 | 7.304497 | AGTTACTCAGATTTGGAAGTACTGT | 57.696 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
7036 | 9165 | 8.418597 | AGTTACTCAGATTTGGAAGTACTGTA | 57.581 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
7037 | 9166 | 8.524487 | AGTTACTCAGATTTGGAAGTACTGTAG | 58.476 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
7038 | 9167 | 8.521176 | GTTACTCAGATTTGGAAGTACTGTAGA | 58.479 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
7039 | 9168 | 6.926313 | ACTCAGATTTGGAAGTACTGTAGAC | 58.074 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
7040 | 9169 | 6.071278 | ACTCAGATTTGGAAGTACTGTAGACC | 60.071 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
7041 | 9170 | 6.017192 | TCAGATTTGGAAGTACTGTAGACCT | 58.983 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7042 | 9171 | 7.179966 | TCAGATTTGGAAGTACTGTAGACCTA | 58.820 | 38.462 | 0.00 | 0.00 | 0.00 | 3.08 |
7043 | 9172 | 7.339721 | TCAGATTTGGAAGTACTGTAGACCTAG | 59.660 | 40.741 | 0.00 | 0.00 | 0.00 | 3.02 |
7044 | 9173 | 6.608002 | AGATTTGGAAGTACTGTAGACCTAGG | 59.392 | 42.308 | 7.41 | 7.41 | 0.00 | 3.02 |
7045 | 9174 | 4.246712 | TGGAAGTACTGTAGACCTAGGG | 57.753 | 50.000 | 14.81 | 0.00 | 0.00 | 3.53 |
7046 | 9175 | 3.595138 | TGGAAGTACTGTAGACCTAGGGT | 59.405 | 47.826 | 14.81 | 2.03 | 39.44 | 4.34 |
7047 | 9176 | 4.045079 | TGGAAGTACTGTAGACCTAGGGTT | 59.955 | 45.833 | 14.81 | 2.91 | 35.25 | 4.11 |
7048 | 9177 | 5.022122 | GGAAGTACTGTAGACCTAGGGTTT | 58.978 | 45.833 | 14.81 | 0.13 | 35.25 | 3.27 |
7049 | 9178 | 6.190587 | GGAAGTACTGTAGACCTAGGGTTTA | 58.809 | 44.000 | 14.81 | 0.00 | 35.25 | 2.01 |
7050 | 9179 | 6.320926 | GGAAGTACTGTAGACCTAGGGTTTAG | 59.679 | 46.154 | 14.81 | 7.20 | 35.25 | 1.85 |
7051 | 9180 | 5.199723 | AGTACTGTAGACCTAGGGTTTAGC | 58.800 | 45.833 | 14.81 | 0.00 | 35.25 | 3.09 |
7052 | 9181 | 3.372897 | ACTGTAGACCTAGGGTTTAGCC | 58.627 | 50.000 | 14.81 | 0.00 | 35.25 | 3.93 |
7053 | 9182 | 2.361438 | CTGTAGACCTAGGGTTTAGCCG | 59.639 | 54.545 | 14.81 | 0.00 | 35.25 | 5.52 |
7054 | 9183 | 2.291800 | TGTAGACCTAGGGTTTAGCCGT | 60.292 | 50.000 | 14.81 | 0.00 | 35.25 | 5.68 |
7055 | 9184 | 1.948391 | AGACCTAGGGTTTAGCCGTT | 58.052 | 50.000 | 14.81 | 0.00 | 35.25 | 4.44 |
7056 | 9185 | 1.553704 | AGACCTAGGGTTTAGCCGTTG | 59.446 | 52.381 | 14.81 | 0.00 | 35.25 | 4.10 |
7057 | 9186 | 0.035725 | ACCTAGGGTTTAGCCGTTGC | 60.036 | 55.000 | 14.81 | 0.00 | 38.44 | 4.17 |
7058 | 9187 | 2.453087 | ACCTAGGGTTTAGCCGTTGCT | 61.453 | 52.381 | 14.81 | 0.00 | 42.13 | 3.91 |
7059 | 9188 | 4.999524 | GACCTAGGGTTTAGCCGTTGCTA | 62.000 | 52.174 | 14.81 | 0.00 | 40.86 | 3.49 |
7060 | 9189 | 6.252532 | GACCTAGGGTTTAGCCGTTGCTAT | 62.253 | 50.000 | 14.81 | 0.00 | 42.40 | 2.97 |
7061 | 9190 | 7.653482 | GACCTAGGGTTTAGCCGTTGCTATT | 62.653 | 48.000 | 14.81 | 0.00 | 42.40 | 1.73 |
7068 | 9197 | 1.800681 | GCCGTTGCTATTGTCACCC | 59.199 | 57.895 | 0.00 | 0.00 | 33.53 | 4.61 |
7069 | 9198 | 0.958382 | GCCGTTGCTATTGTCACCCA | 60.958 | 55.000 | 0.00 | 0.00 | 33.53 | 4.51 |
7070 | 9199 | 0.802494 | CCGTTGCTATTGTCACCCAC | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
7071 | 9200 | 0.802494 | CGTTGCTATTGTCACCCACC | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
7072 | 9201 | 1.880221 | CGTTGCTATTGTCACCCACCA | 60.880 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
7073 | 9202 | 1.812571 | GTTGCTATTGTCACCCACCAG | 59.187 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
7074 | 9203 | 0.322456 | TGCTATTGTCACCCACCAGC | 60.322 | 55.000 | 0.00 | 0.00 | 32.93 | 4.85 |
7075 | 9204 | 1.032114 | GCTATTGTCACCCACCAGCC | 61.032 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
7076 | 9205 | 0.394352 | CTATTGTCACCCACCAGCCC | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
7077 | 9206 | 1.858739 | TATTGTCACCCACCAGCCCC | 61.859 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
7078 | 9207 | 4.918360 | TGTCACCCACCAGCCCCT | 62.918 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
7079 | 9208 | 4.351054 | GTCACCCACCAGCCCCTG | 62.351 | 72.222 | 0.00 | 0.00 | 0.00 | 4.45 |
7080 | 9209 | 4.918360 | TCACCCACCAGCCCCTGT | 62.918 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
7081 | 9210 | 3.902112 | CACCCACCAGCCCCTGTT | 61.902 | 66.667 | 0.00 | 0.00 | 0.00 | 3.16 |
7082 | 9211 | 3.902112 | ACCCACCAGCCCCTGTTG | 61.902 | 66.667 | 0.00 | 0.00 | 0.00 | 3.33 |
7083 | 9212 | 3.579302 | CCCACCAGCCCCTGTTGA | 61.579 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
7084 | 9213 | 2.034687 | CCACCAGCCCCTGTTGAG | 59.965 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
7085 | 9214 | 2.833913 | CCACCAGCCCCTGTTGAGT | 61.834 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
7086 | 9215 | 1.302832 | CACCAGCCCCTGTTGAGTC | 60.303 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
7087 | 9216 | 1.462238 | ACCAGCCCCTGTTGAGTCT | 60.462 | 57.895 | 0.00 | 0.00 | 0.00 | 3.24 |
7088 | 9217 | 1.298014 | CCAGCCCCTGTTGAGTCTC | 59.702 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
7089 | 9218 | 1.298014 | CAGCCCCTGTTGAGTCTCC | 59.702 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
7090 | 9219 | 1.920835 | AGCCCCTGTTGAGTCTCCC | 60.921 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
7091 | 9220 | 2.224159 | GCCCCTGTTGAGTCTCCCA | 61.224 | 63.158 | 0.00 | 0.00 | 0.00 | 4.37 |
7092 | 9221 | 1.986413 | CCCCTGTTGAGTCTCCCAG | 59.014 | 63.158 | 8.86 | 8.86 | 0.00 | 4.45 |
7093 | 9222 | 1.557269 | CCCCTGTTGAGTCTCCCAGG | 61.557 | 65.000 | 21.07 | 21.07 | 43.34 | 4.45 |
7094 | 9223 | 0.545309 | CCCTGTTGAGTCTCCCAGGA | 60.545 | 60.000 | 26.25 | 0.00 | 45.97 | 3.86 |
7095 | 9224 | 0.901124 | CCTGTTGAGTCTCCCAGGAG | 59.099 | 60.000 | 22.59 | 7.43 | 45.97 | 3.69 |
7096 | 9225 | 1.551099 | CCTGTTGAGTCTCCCAGGAGA | 60.551 | 57.143 | 22.59 | 12.50 | 45.97 | 3.71 |
7102 | 9231 | 2.955246 | TCTCCCAGGAGAGCCCCT | 60.955 | 66.667 | 12.50 | 0.00 | 45.26 | 4.79 |
7117 | 9246 | 4.247380 | CCTGCCCGGCCTGATCTC | 62.247 | 72.222 | 7.03 | 0.00 | 0.00 | 2.75 |
7118 | 9247 | 4.598894 | CTGCCCGGCCTGATCTCG | 62.599 | 72.222 | 7.03 | 0.00 | 0.00 | 4.04 |
7120 | 9249 | 3.849951 | GCCCGGCCTGATCTCGAA | 61.850 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
7121 | 9250 | 2.900273 | CCCGGCCTGATCTCGAAA | 59.100 | 61.111 | 0.00 | 0.00 | 0.00 | 3.46 |
7122 | 9251 | 1.227380 | CCCGGCCTGATCTCGAAAG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 2.62 |
7123 | 9252 | 1.517832 | CCGGCCTGATCTCGAAAGT | 59.482 | 57.895 | 0.00 | 0.00 | 0.00 | 2.66 |
7124 | 9253 | 0.807667 | CCGGCCTGATCTCGAAAGTG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7125 | 9254 | 0.807667 | CGGCCTGATCTCGAAAGTGG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
7126 | 9255 | 0.537188 | GGCCTGATCTCGAAAGTGGA | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7127 | 9256 | 1.139853 | GGCCTGATCTCGAAAGTGGAT | 59.860 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
7128 | 9257 | 2.478831 | GCCTGATCTCGAAAGTGGATC | 58.521 | 52.381 | 4.99 | 4.99 | 39.68 | 3.36 |
7129 | 9258 | 2.804933 | GCCTGATCTCGAAAGTGGATCC | 60.805 | 54.545 | 4.20 | 4.20 | 39.07 | 3.36 |
7130 | 9259 | 2.697751 | CCTGATCTCGAAAGTGGATCCT | 59.302 | 50.000 | 14.23 | 0.00 | 39.07 | 3.24 |
7131 | 9260 | 3.243704 | CCTGATCTCGAAAGTGGATCCTC | 60.244 | 52.174 | 14.23 | 9.81 | 39.07 | 3.71 |
7132 | 9261 | 3.636300 | CTGATCTCGAAAGTGGATCCTCT | 59.364 | 47.826 | 14.23 | 12.34 | 39.07 | 3.69 |
7133 | 9262 | 4.793201 | TGATCTCGAAAGTGGATCCTCTA | 58.207 | 43.478 | 16.52 | 0.60 | 39.07 | 2.43 |
7134 | 9263 | 5.201243 | TGATCTCGAAAGTGGATCCTCTAA | 58.799 | 41.667 | 16.52 | 3.00 | 39.07 | 2.10 |
7135 | 9264 | 4.985538 | TCTCGAAAGTGGATCCTCTAAC | 57.014 | 45.455 | 16.52 | 12.06 | 0.00 | 2.34 |
7136 | 9265 | 4.341487 | TCTCGAAAGTGGATCCTCTAACA | 58.659 | 43.478 | 16.52 | 1.43 | 0.00 | 2.41 |
7137 | 9266 | 4.956700 | TCTCGAAAGTGGATCCTCTAACAT | 59.043 | 41.667 | 16.52 | 4.22 | 0.00 | 2.71 |
7138 | 9267 | 5.011090 | TCGAAAGTGGATCCTCTAACATG | 57.989 | 43.478 | 16.52 | 6.06 | 0.00 | 3.21 |
7139 | 9268 | 4.709886 | TCGAAAGTGGATCCTCTAACATGA | 59.290 | 41.667 | 16.52 | 8.07 | 0.00 | 3.07 |
7140 | 9269 | 5.186992 | TCGAAAGTGGATCCTCTAACATGAA | 59.813 | 40.000 | 16.52 | 0.00 | 0.00 | 2.57 |
7141 | 9270 | 5.521735 | CGAAAGTGGATCCTCTAACATGAAG | 59.478 | 44.000 | 16.52 | 0.00 | 0.00 | 3.02 |
7142 | 9271 | 6.627087 | AAAGTGGATCCTCTAACATGAAGA | 57.373 | 37.500 | 16.52 | 0.68 | 0.00 | 2.87 |
7143 | 9272 | 6.627087 | AAGTGGATCCTCTAACATGAAGAA | 57.373 | 37.500 | 16.52 | 0.00 | 0.00 | 2.52 |
7144 | 9273 | 6.232581 | AGTGGATCCTCTAACATGAAGAAG | 57.767 | 41.667 | 14.73 | 0.00 | 0.00 | 2.85 |
7145 | 9274 | 5.130145 | AGTGGATCCTCTAACATGAAGAAGG | 59.870 | 44.000 | 14.73 | 1.01 | 0.00 | 3.46 |
7146 | 9275 | 4.410228 | TGGATCCTCTAACATGAAGAAGGG | 59.590 | 45.833 | 14.23 | 1.09 | 0.00 | 3.95 |
7147 | 9276 | 4.656112 | GGATCCTCTAACATGAAGAAGGGA | 59.344 | 45.833 | 3.84 | 6.51 | 0.00 | 4.20 |
7148 | 9277 | 5.131142 | GGATCCTCTAACATGAAGAAGGGAA | 59.869 | 44.000 | 3.84 | 0.00 | 0.00 | 3.97 |
7149 | 9278 | 5.683876 | TCCTCTAACATGAAGAAGGGAAG | 57.316 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
7150 | 9279 | 5.094387 | TCCTCTAACATGAAGAAGGGAAGT | 58.906 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
7151 | 9280 | 5.187967 | TCCTCTAACATGAAGAAGGGAAGTC | 59.812 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7152 | 9281 | 5.046304 | CCTCTAACATGAAGAAGGGAAGTCA | 60.046 | 44.000 | 0.00 | 0.00 | 0.00 | 3.41 |
7153 | 9282 | 5.794894 | TCTAACATGAAGAAGGGAAGTCAC | 58.205 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
7154 | 9283 | 3.425162 | ACATGAAGAAGGGAAGTCACC | 57.575 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
7155 | 9284 | 2.982488 | ACATGAAGAAGGGAAGTCACCT | 59.018 | 45.455 | 0.00 | 0.00 | 40.96 | 4.00 |
7156 | 9285 | 4.168101 | ACATGAAGAAGGGAAGTCACCTA | 58.832 | 43.478 | 0.00 | 0.00 | 37.35 | 3.08 |
7157 | 9286 | 4.597507 | ACATGAAGAAGGGAAGTCACCTAA | 59.402 | 41.667 | 0.00 | 0.00 | 37.35 | 2.69 |
7158 | 9287 | 4.891992 | TGAAGAAGGGAAGTCACCTAAG | 57.108 | 45.455 | 0.00 | 0.00 | 37.35 | 2.18 |
7159 | 9288 | 3.008049 | TGAAGAAGGGAAGTCACCTAAGC | 59.992 | 47.826 | 0.00 | 0.00 | 37.35 | 3.09 |
7160 | 9289 | 2.909217 | AGAAGGGAAGTCACCTAAGCT | 58.091 | 47.619 | 0.00 | 0.00 | 37.35 | 3.74 |
7161 | 9290 | 4.062490 | AGAAGGGAAGTCACCTAAGCTA | 57.938 | 45.455 | 0.00 | 0.00 | 37.35 | 3.32 |
7162 | 9291 | 3.770388 | AGAAGGGAAGTCACCTAAGCTAC | 59.230 | 47.826 | 0.00 | 0.00 | 37.35 | 3.58 |
7163 | 9292 | 3.185880 | AGGGAAGTCACCTAAGCTACA | 57.814 | 47.619 | 0.00 | 0.00 | 36.32 | 2.74 |
7164 | 9293 | 3.517612 | AGGGAAGTCACCTAAGCTACAA | 58.482 | 45.455 | 0.00 | 0.00 | 36.32 | 2.41 |
7165 | 9294 | 4.104831 | AGGGAAGTCACCTAAGCTACAAT | 58.895 | 43.478 | 0.00 | 0.00 | 36.32 | 2.71 |
7166 | 9295 | 4.536489 | AGGGAAGTCACCTAAGCTACAATT | 59.464 | 41.667 | 0.00 | 0.00 | 36.32 | 2.32 |
7167 | 9296 | 4.876679 | GGGAAGTCACCTAAGCTACAATTC | 59.123 | 45.833 | 0.00 | 0.00 | 0.00 | 2.17 |
7168 | 9297 | 4.876679 | GGAAGTCACCTAAGCTACAATTCC | 59.123 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
7169 | 9298 | 4.489306 | AGTCACCTAAGCTACAATTCCC | 57.511 | 45.455 | 0.00 | 0.00 | 0.00 | 3.97 |
7170 | 9299 | 4.104831 | AGTCACCTAAGCTACAATTCCCT | 58.895 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
7171 | 9300 | 5.278061 | AGTCACCTAAGCTACAATTCCCTA | 58.722 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
7172 | 9301 | 5.724854 | AGTCACCTAAGCTACAATTCCCTAA | 59.275 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7173 | 9302 | 5.816258 | GTCACCTAAGCTACAATTCCCTAAC | 59.184 | 44.000 | 0.00 | 0.00 | 0.00 | 2.34 |
7174 | 9303 | 5.724854 | TCACCTAAGCTACAATTCCCTAACT | 59.275 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
7175 | 9304 | 6.214819 | TCACCTAAGCTACAATTCCCTAACTT | 59.785 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
7176 | 9305 | 6.539103 | CACCTAAGCTACAATTCCCTAACTTC | 59.461 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
7177 | 9306 | 6.056236 | CCTAAGCTACAATTCCCTAACTTCC | 58.944 | 44.000 | 0.00 | 0.00 | 0.00 | 3.46 |
7178 | 9307 | 4.505324 | AGCTACAATTCCCTAACTTCCC | 57.495 | 45.455 | 0.00 | 0.00 | 0.00 | 3.97 |
7179 | 9308 | 4.112331 | AGCTACAATTCCCTAACTTCCCT | 58.888 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
7180 | 9309 | 4.164413 | AGCTACAATTCCCTAACTTCCCTC | 59.836 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
7181 | 9310 | 4.686396 | GCTACAATTCCCTAACTTCCCTCC | 60.686 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7182 | 9311 | 3.542604 | ACAATTCCCTAACTTCCCTCCT | 58.457 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
7183 | 9312 | 3.923425 | ACAATTCCCTAACTTCCCTCCTT | 59.077 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
7184 | 9313 | 4.018324 | ACAATTCCCTAACTTCCCTCCTTC | 60.018 | 45.833 | 0.00 | 0.00 | 0.00 | 3.46 |
7185 | 9314 | 3.285290 | TTCCCTAACTTCCCTCCTTCA | 57.715 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
7186 | 9315 | 2.547990 | TCCCTAACTTCCCTCCTTCAC | 58.452 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
7187 | 9316 | 2.113777 | TCCCTAACTTCCCTCCTTCACT | 59.886 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
7188 | 9317 | 2.913617 | CCCTAACTTCCCTCCTTCACTT | 59.086 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7189 | 9318 | 3.330998 | CCCTAACTTCCCTCCTTCACTTT | 59.669 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
7190 | 9319 | 4.565861 | CCCTAACTTCCCTCCTTCACTTTC | 60.566 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
7191 | 9320 | 4.041691 | CCTAACTTCCCTCCTTCACTTTCA | 59.958 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
7192 | 9321 | 4.731313 | AACTTCCCTCCTTCACTTTCAT | 57.269 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
7193 | 9322 | 5.843019 | AACTTCCCTCCTTCACTTTCATA | 57.157 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
7194 | 9323 | 6.394345 | AACTTCCCTCCTTCACTTTCATAT | 57.606 | 37.500 | 0.00 | 0.00 | 0.00 | 1.78 |
7195 | 9324 | 5.749462 | ACTTCCCTCCTTCACTTTCATATG | 58.251 | 41.667 | 0.00 | 0.00 | 0.00 | 1.78 |
7196 | 9325 | 5.488919 | ACTTCCCTCCTTCACTTTCATATGA | 59.511 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
7197 | 9326 | 6.159398 | ACTTCCCTCCTTCACTTTCATATGAT | 59.841 | 38.462 | 6.17 | 0.00 | 0.00 | 2.45 |
7198 | 9327 | 6.581388 | TCCCTCCTTCACTTTCATATGATT | 57.419 | 37.500 | 6.17 | 0.00 | 0.00 | 2.57 |
7199 | 9328 | 6.973642 | TCCCTCCTTCACTTTCATATGATTT | 58.026 | 36.000 | 6.17 | 0.00 | 0.00 | 2.17 |
7200 | 9329 | 8.101309 | TCCCTCCTTCACTTTCATATGATTTA | 57.899 | 34.615 | 6.17 | 0.00 | 0.00 | 1.40 |
7201 | 9330 | 8.556589 | TCCCTCCTTCACTTTCATATGATTTAA | 58.443 | 33.333 | 6.17 | 0.00 | 0.00 | 1.52 |
7202 | 9331 | 9.359653 | CCCTCCTTCACTTTCATATGATTTAAT | 57.640 | 33.333 | 6.17 | 0.00 | 0.00 | 1.40 |
7272 | 9401 | 7.692908 | ACATGTACAAAAGTTGCATACAAAC | 57.307 | 32.000 | 0.00 | 0.00 | 37.58 | 2.93 |
7273 | 9402 | 7.261325 | ACATGTACAAAAGTTGCATACAAACA | 58.739 | 30.769 | 0.00 | 0.00 | 37.58 | 2.83 |
7274 | 9403 | 7.761704 | ACATGTACAAAAGTTGCATACAAACAA | 59.238 | 29.630 | 0.00 | 0.00 | 37.58 | 2.83 |
7275 | 9404 | 8.598924 | CATGTACAAAAGTTGCATACAAACAAA | 58.401 | 29.630 | 0.00 | 0.00 | 37.58 | 2.83 |
7276 | 9405 | 8.534333 | TGTACAAAAGTTGCATACAAACAAAA | 57.466 | 26.923 | 0.00 | 0.00 | 37.58 | 2.44 |
7277 | 9406 | 9.155975 | TGTACAAAAGTTGCATACAAACAAAAT | 57.844 | 25.926 | 0.00 | 0.00 | 37.58 | 1.82 |
7278 | 9407 | 9.980780 | GTACAAAAGTTGCATACAAACAAAATT | 57.019 | 25.926 | 0.00 | 0.00 | 37.58 | 1.82 |
7283 | 9412 | 8.900983 | AAGTTGCATACAAACAAAATTATGGT | 57.099 | 26.923 | 0.00 | 0.00 | 37.58 | 3.55 |
7284 | 9413 | 8.309163 | AGTTGCATACAAACAAAATTATGGTG | 57.691 | 30.769 | 0.00 | 0.00 | 37.58 | 4.17 |
7285 | 9414 | 7.930865 | AGTTGCATACAAACAAAATTATGGTGT | 59.069 | 29.630 | 0.00 | 0.00 | 37.58 | 4.16 |
7286 | 9415 | 9.197694 | GTTGCATACAAACAAAATTATGGTGTA | 57.802 | 29.630 | 0.00 | 0.00 | 37.58 | 2.90 |
7287 | 9416 | 9.764363 | TTGCATACAAACAAAATTATGGTGTAA | 57.236 | 25.926 | 0.00 | 0.00 | 32.32 | 2.41 |
7288 | 9417 | 9.935241 | TGCATACAAACAAAATTATGGTGTAAT | 57.065 | 25.926 | 0.00 | 0.00 | 32.32 | 1.89 |
7351 | 9480 | 9.603189 | AGTAGATAATACAATGTTACCCTAGCT | 57.397 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
7354 | 9483 | 7.661847 | AGATAATACAATGTTACCCTAGCTTGC | 59.338 | 37.037 | 0.00 | 0.00 | 0.00 | 4.01 |
7355 | 9484 | 3.433306 | ACAATGTTACCCTAGCTTGCA | 57.567 | 42.857 | 0.00 | 0.00 | 0.00 | 4.08 |
7356 | 9485 | 3.968265 | ACAATGTTACCCTAGCTTGCAT | 58.032 | 40.909 | 0.00 | 0.00 | 0.00 | 3.96 |
7357 | 9486 | 4.344104 | ACAATGTTACCCTAGCTTGCATT | 58.656 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
7358 | 9487 | 4.158394 | ACAATGTTACCCTAGCTTGCATTG | 59.842 | 41.667 | 17.23 | 17.23 | 43.96 | 2.82 |
7359 | 9488 | 3.433306 | TGTTACCCTAGCTTGCATTGT | 57.567 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
7360 | 9489 | 4.561500 | TGTTACCCTAGCTTGCATTGTA | 57.438 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
7361 | 9490 | 4.513442 | TGTTACCCTAGCTTGCATTGTAG | 58.487 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
7362 | 9491 | 2.044123 | ACCCTAGCTTGCATTGTAGC | 57.956 | 50.000 | 0.00 | 0.00 | 37.66 | 3.58 |
7364 | 9493 | 2.216898 | CCCTAGCTTGCATTGTAGCTC | 58.783 | 52.381 | 13.74 | 0.00 | 44.05 | 4.09 |
7365 | 9494 | 2.420547 | CCCTAGCTTGCATTGTAGCTCA | 60.421 | 50.000 | 13.74 | 1.54 | 44.05 | 4.26 |
7366 | 9495 | 2.871022 | CCTAGCTTGCATTGTAGCTCAG | 59.129 | 50.000 | 13.74 | 9.75 | 44.05 | 3.35 |
7367 | 9496 | 1.747709 | AGCTTGCATTGTAGCTCAGG | 58.252 | 50.000 | 4.77 | 0.00 | 44.05 | 3.86 |
7368 | 9497 | 1.004044 | AGCTTGCATTGTAGCTCAGGT | 59.996 | 47.619 | 4.77 | 0.00 | 44.05 | 4.00 |
7369 | 9498 | 1.131883 | GCTTGCATTGTAGCTCAGGTG | 59.868 | 52.381 | 0.75 | 0.00 | 34.57 | 4.00 |
7370 | 9499 | 2.703416 | CTTGCATTGTAGCTCAGGTGA | 58.297 | 47.619 | 0.00 | 0.00 | 34.99 | 4.02 |
7371 | 9500 | 2.099141 | TGCATTGTAGCTCAGGTGAC | 57.901 | 50.000 | 0.00 | 0.00 | 34.99 | 3.67 |
7372 | 9501 | 1.625315 | TGCATTGTAGCTCAGGTGACT | 59.375 | 47.619 | 0.00 | 0.00 | 36.78 | 3.41 |
7373 | 9502 | 2.038952 | TGCATTGTAGCTCAGGTGACTT | 59.961 | 45.455 | 0.00 | 0.00 | 34.72 | 3.01 |
7374 | 9503 | 3.077359 | GCATTGTAGCTCAGGTGACTTT | 58.923 | 45.455 | 0.00 | 0.00 | 40.21 | 2.66 |
7375 | 9504 | 3.126000 | GCATTGTAGCTCAGGTGACTTTC | 59.874 | 47.826 | 0.00 | 0.00 | 40.21 | 2.62 |
7376 | 9505 | 3.402628 | TTGTAGCTCAGGTGACTTTCC | 57.597 | 47.619 | 0.00 | 0.00 | 40.21 | 3.13 |
7377 | 9506 | 2.609747 | TGTAGCTCAGGTGACTTTCCT | 58.390 | 47.619 | 0.00 | 0.00 | 40.21 | 3.36 |
7378 | 9507 | 2.563179 | TGTAGCTCAGGTGACTTTCCTC | 59.437 | 50.000 | 0.00 | 0.00 | 40.21 | 3.71 |
7379 | 9508 | 0.980423 | AGCTCAGGTGACTTTCCTCC | 59.020 | 55.000 | 0.00 | 0.00 | 40.21 | 4.30 |
7380 | 9509 | 0.980423 | GCTCAGGTGACTTTCCTCCT | 59.020 | 55.000 | 0.00 | 0.00 | 40.21 | 3.69 |
7381 | 9510 | 1.349357 | GCTCAGGTGACTTTCCTCCTT | 59.651 | 52.381 | 0.00 | 0.00 | 40.21 | 3.36 |
7382 | 9511 | 2.567615 | GCTCAGGTGACTTTCCTCCTTA | 59.432 | 50.000 | 0.00 | 0.00 | 40.21 | 2.69 |
7383 | 9512 | 3.008049 | GCTCAGGTGACTTTCCTCCTTAA | 59.992 | 47.826 | 0.00 | 0.00 | 40.21 | 1.85 |
7384 | 9513 | 4.323868 | GCTCAGGTGACTTTCCTCCTTAAT | 60.324 | 45.833 | 0.00 | 0.00 | 40.21 | 1.40 |
7385 | 9514 | 5.165961 | TCAGGTGACTTTCCTCCTTAATG | 57.834 | 43.478 | 0.00 | 0.00 | 40.21 | 1.90 |
7386 | 9515 | 4.597507 | TCAGGTGACTTTCCTCCTTAATGT | 59.402 | 41.667 | 0.00 | 0.00 | 40.21 | 2.71 |
7387 | 9516 | 5.073144 | TCAGGTGACTTTCCTCCTTAATGTT | 59.927 | 40.000 | 0.00 | 0.00 | 40.21 | 2.71 |
7388 | 9517 | 6.271391 | TCAGGTGACTTTCCTCCTTAATGTTA | 59.729 | 38.462 | 0.00 | 0.00 | 40.21 | 2.41 |
7389 | 9518 | 6.595716 | CAGGTGACTTTCCTCCTTAATGTTAG | 59.404 | 42.308 | 0.00 | 0.00 | 40.21 | 2.34 |
7390 | 9519 | 6.500751 | AGGTGACTTTCCTCCTTAATGTTAGA | 59.499 | 38.462 | 0.00 | 0.00 | 37.44 | 2.10 |
7391 | 9520 | 6.819146 | GGTGACTTTCCTCCTTAATGTTAGAG | 59.181 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
7392 | 9521 | 6.819146 | GTGACTTTCCTCCTTAATGTTAGAGG | 59.181 | 42.308 | 0.00 | 0.00 | 46.11 | 3.69 |
7399 | 9528 | 6.739331 | CTCCTTAATGTTAGAGGATCCACT | 57.261 | 41.667 | 16.41 | 16.41 | 38.80 | 4.00 |
7400 | 9529 | 7.130681 | CTCCTTAATGTTAGAGGATCCACTT | 57.869 | 40.000 | 17.39 | 1.28 | 38.80 | 3.16 |
7401 | 9530 | 7.125792 | TCCTTAATGTTAGAGGATCCACTTC | 57.874 | 40.000 | 17.39 | 11.20 | 34.74 | 3.01 |
7402 | 9531 | 6.099845 | TCCTTAATGTTAGAGGATCCACTTCC | 59.900 | 42.308 | 17.39 | 8.65 | 34.74 | 3.46 |
7403 | 9532 | 4.779993 | AATGTTAGAGGATCCACTTCCC | 57.220 | 45.455 | 17.39 | 6.30 | 36.35 | 3.97 |
7404 | 9533 | 2.478292 | TGTTAGAGGATCCACTTCCCC | 58.522 | 52.381 | 17.39 | 3.98 | 36.35 | 4.81 |
7405 | 9534 | 1.413077 | GTTAGAGGATCCACTTCCCCG | 59.587 | 57.143 | 17.39 | 0.00 | 36.35 | 5.73 |
7406 | 9535 | 0.931468 | TAGAGGATCCACTTCCCCGA | 59.069 | 55.000 | 17.39 | 0.00 | 36.35 | 5.14 |
7407 | 9536 | 0.266152 | AGAGGATCCACTTCCCCGAT | 59.734 | 55.000 | 15.82 | 0.00 | 36.35 | 4.18 |
7408 | 9537 | 0.682292 | GAGGATCCACTTCCCCGATC | 59.318 | 60.000 | 15.82 | 0.00 | 36.35 | 3.69 |
7409 | 9538 | 0.266152 | AGGATCCACTTCCCCGATCT | 59.734 | 55.000 | 15.82 | 0.00 | 36.35 | 2.75 |
7410 | 9539 | 0.682292 | GGATCCACTTCCCCGATCTC | 59.318 | 60.000 | 6.95 | 0.00 | 34.19 | 2.75 |
7411 | 9540 | 0.315568 | GATCCACTTCCCCGATCTCG | 59.684 | 60.000 | 0.00 | 0.00 | 39.44 | 4.04 |
7412 | 9541 | 1.749334 | ATCCACTTCCCCGATCTCGC | 61.749 | 60.000 | 0.00 | 0.00 | 38.18 | 5.03 |
7413 | 9542 | 2.721167 | CCACTTCCCCGATCTCGCA | 61.721 | 63.158 | 0.00 | 0.00 | 38.18 | 5.10 |
7414 | 9543 | 1.443407 | CACTTCCCCGATCTCGCAT | 59.557 | 57.895 | 0.00 | 0.00 | 38.18 | 4.73 |
7415 | 9544 | 0.598680 | CACTTCCCCGATCTCGCATC | 60.599 | 60.000 | 0.00 | 0.00 | 38.18 | 3.91 |
7416 | 9545 | 0.757188 | ACTTCCCCGATCTCGCATCT | 60.757 | 55.000 | 0.00 | 0.00 | 38.18 | 2.90 |
7417 | 9546 | 0.390860 | CTTCCCCGATCTCGCATCTT | 59.609 | 55.000 | 0.00 | 0.00 | 38.18 | 2.40 |
7418 | 9547 | 0.389391 | TTCCCCGATCTCGCATCTTC | 59.611 | 55.000 | 0.00 | 0.00 | 38.18 | 2.87 |
7419 | 9548 | 1.005630 | CCCCGATCTCGCATCTTCC | 60.006 | 63.158 | 0.00 | 0.00 | 38.18 | 3.46 |
7420 | 9549 | 1.005630 | CCCGATCTCGCATCTTCCC | 60.006 | 63.158 | 0.00 | 0.00 | 38.18 | 3.97 |
7421 | 9550 | 1.005630 | CCGATCTCGCATCTTCCCC | 60.006 | 63.158 | 0.00 | 0.00 | 38.18 | 4.81 |
7422 | 9551 | 1.742146 | CGATCTCGCATCTTCCCCA | 59.258 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
7423 | 9552 | 0.319383 | CGATCTCGCATCTTCCCCAG | 60.319 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
7424 | 9553 | 1.043816 | GATCTCGCATCTTCCCCAGA | 58.956 | 55.000 | 0.00 | 0.00 | 35.33 | 3.86 |
7425 | 9554 | 1.000731 | GATCTCGCATCTTCCCCAGAG | 59.999 | 57.143 | 0.00 | 0.00 | 33.87 | 3.35 |
7426 | 9555 | 1.045350 | TCTCGCATCTTCCCCAGAGG | 61.045 | 60.000 | 0.00 | 0.00 | 36.30 | 3.69 |
7430 | 9559 | 1.153005 | CATCTTCCCCAGAGGCTGC | 60.153 | 63.158 | 0.00 | 0.00 | 33.87 | 5.25 |
7431 | 9560 | 2.739996 | ATCTTCCCCAGAGGCTGCG | 61.740 | 63.158 | 0.00 | 0.00 | 33.87 | 5.18 |
7432 | 9561 | 3.710722 | CTTCCCCAGAGGCTGCGT | 61.711 | 66.667 | 0.00 | 0.00 | 34.51 | 5.24 |
7433 | 9562 | 3.965539 | CTTCCCCAGAGGCTGCGTG | 62.966 | 68.421 | 0.00 | 0.00 | 34.51 | 5.34 |
7436 | 9565 | 4.020617 | CCCAGAGGCTGCGTGGAA | 62.021 | 66.667 | 13.99 | 0.00 | 32.60 | 3.53 |
7437 | 9566 | 2.032528 | CCAGAGGCTGCGTGGAAA | 59.967 | 61.111 | 0.00 | 0.00 | 32.60 | 3.13 |
7438 | 9567 | 2.037136 | CCAGAGGCTGCGTGGAAAG | 61.037 | 63.158 | 0.00 | 0.00 | 32.60 | 2.62 |
7439 | 9568 | 2.037136 | CAGAGGCTGCGTGGAAAGG | 61.037 | 63.158 | 0.00 | 0.00 | 0.00 | 3.11 |
7440 | 9569 | 2.747855 | GAGGCTGCGTGGAAAGGG | 60.748 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
7441 | 9570 | 3.249189 | AGGCTGCGTGGAAAGGGA | 61.249 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
7442 | 9571 | 2.044946 | GGCTGCGTGGAAAGGGAT | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
7443 | 9572 | 2.409870 | GGCTGCGTGGAAAGGGATG | 61.410 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
7444 | 9573 | 2.409870 | GCTGCGTGGAAAGGGATGG | 61.410 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
7445 | 9574 | 1.750399 | CTGCGTGGAAAGGGATGGG | 60.750 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
7446 | 9575 | 2.440247 | GCGTGGAAAGGGATGGGG | 60.440 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
7447 | 9576 | 2.275418 | CGTGGAAAGGGATGGGGG | 59.725 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
7448 | 9577 | 2.305607 | CGTGGAAAGGGATGGGGGA | 61.306 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
7449 | 9578 | 1.615262 | GTGGAAAGGGATGGGGGAG | 59.385 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
7450 | 9579 | 1.622442 | TGGAAAGGGATGGGGGAGG | 60.622 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
7451 | 9580 | 1.308746 | GGAAAGGGATGGGGGAGGA | 60.309 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
7452 | 9581 | 1.356494 | GGAAAGGGATGGGGGAGGAG | 61.356 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
7453 | 9582 | 1.309102 | AAAGGGATGGGGGAGGAGG | 60.309 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
7454 | 9583 | 1.848835 | AAAGGGATGGGGGAGGAGGA | 61.849 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
7455 | 9584 | 1.627017 | AAGGGATGGGGGAGGAGGAT | 61.627 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
7456 | 9585 | 1.540118 | GGGATGGGGGAGGAGGATC | 60.540 | 68.421 | 0.00 | 0.00 | 0.00 | 3.36 |
7457 | 9586 | 1.556561 | GGATGGGGGAGGAGGATCT | 59.443 | 63.158 | 0.00 | 0.00 | 33.73 | 2.75 |
7458 | 9587 | 0.839853 | GGATGGGGGAGGAGGATCTG | 60.840 | 65.000 | 0.00 | 0.00 | 33.73 | 2.90 |
7459 | 9588 | 0.192064 | GATGGGGGAGGAGGATCTGA | 59.808 | 60.000 | 0.00 | 0.00 | 33.73 | 3.27 |
7460 | 9589 | 0.880357 | ATGGGGGAGGAGGATCTGAT | 59.120 | 55.000 | 0.00 | 0.00 | 33.73 | 2.90 |
7461 | 9590 | 0.649992 | TGGGGGAGGAGGATCTGATT | 59.350 | 55.000 | 0.00 | 0.00 | 33.73 | 2.57 |
7462 | 9591 | 1.873049 | TGGGGGAGGAGGATCTGATTA | 59.127 | 52.381 | 0.00 | 0.00 | 33.73 | 1.75 |
7463 | 9592 | 2.460293 | TGGGGGAGGAGGATCTGATTAT | 59.540 | 50.000 | 0.00 | 0.00 | 33.73 | 1.28 |
7464 | 9593 | 3.115803 | TGGGGGAGGAGGATCTGATTATT | 60.116 | 47.826 | 0.00 | 0.00 | 33.73 | 1.40 |
7465 | 9594 | 4.111257 | TGGGGGAGGAGGATCTGATTATTA | 59.889 | 45.833 | 0.00 | 0.00 | 33.73 | 0.98 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
100 | 101 | 1.303398 | AGACGACGGAGAGGAGCAA | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 3.91 |
238 | 242 | 2.490115 | TGCAAAAGTCAAGAACCGTTGT | 59.510 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
241 | 245 | 4.111916 | CAATTGCAAAAGTCAAGAACCGT | 58.888 | 39.130 | 1.71 | 0.00 | 0.00 | 4.83 |
251 | 255 | 7.981225 | ACAAATAGACAGAACAATTGCAAAAGT | 59.019 | 29.630 | 1.71 | 1.69 | 0.00 | 2.66 |
426 | 442 | 7.279758 | ACATTTTCTTTTTCTTTTCATCGCCAA | 59.720 | 29.630 | 0.00 | 0.00 | 0.00 | 4.52 |
430 | 446 | 9.971744 | AACAACATTTTCTTTTTCTTTTCATCG | 57.028 | 25.926 | 0.00 | 0.00 | 0.00 | 3.84 |
637 | 654 | 6.597832 | TGGAATTTAATGGTTTCGTTCCAT | 57.402 | 33.333 | 0.00 | 3.73 | 46.20 | 3.41 |
654 | 672 | 7.433680 | GTTCAGGAACAAAGTGTAATGGAATT | 58.566 | 34.615 | 7.27 | 0.00 | 40.84 | 2.17 |
692 | 710 | 1.134640 | AGGCTGAACGTGTGTGTTGTA | 60.135 | 47.619 | 0.00 | 0.00 | 30.75 | 2.41 |
693 | 711 | 0.392461 | AGGCTGAACGTGTGTGTTGT | 60.392 | 50.000 | 0.00 | 0.00 | 30.75 | 3.32 |
694 | 712 | 0.027979 | CAGGCTGAACGTGTGTGTTG | 59.972 | 55.000 | 9.42 | 0.00 | 30.75 | 3.33 |
695 | 713 | 0.392461 | ACAGGCTGAACGTGTGTGTT | 60.392 | 50.000 | 23.66 | 0.00 | 45.37 | 3.32 |
696 | 714 | 0.810031 | GACAGGCTGAACGTGTGTGT | 60.810 | 55.000 | 23.66 | 0.00 | 46.99 | 3.72 |
697 | 715 | 1.821241 | CGACAGGCTGAACGTGTGTG | 61.821 | 60.000 | 23.66 | 0.00 | 46.99 | 3.82 |
698 | 716 | 1.591594 | CGACAGGCTGAACGTGTGT | 60.592 | 57.895 | 23.66 | 0.00 | 46.99 | 3.72 |
699 | 717 | 1.591594 | ACGACAGGCTGAACGTGTG | 60.592 | 57.895 | 30.06 | 12.98 | 46.99 | 3.82 |
790 | 837 | 1.614241 | GGTGCTGATACCGGACCTGT | 61.614 | 60.000 | 9.46 | 0.00 | 0.00 | 4.00 |
791 | 838 | 1.144057 | GGTGCTGATACCGGACCTG | 59.856 | 63.158 | 9.46 | 1.59 | 0.00 | 4.00 |
798 | 845 | 1.498865 | CGATTGGCGGTGCTGATACC | 61.499 | 60.000 | 0.00 | 0.00 | 37.37 | 2.73 |
801 | 848 | 2.108514 | CACGATTGGCGGTGCTGAT | 61.109 | 57.895 | 0.00 | 0.00 | 46.49 | 2.90 |
802 | 849 | 2.741985 | CACGATTGGCGGTGCTGA | 60.742 | 61.111 | 0.00 | 0.00 | 46.49 | 4.26 |
804 | 851 | 2.281484 | AACACGATTGGCGGTGCT | 60.281 | 55.556 | 0.00 | 0.00 | 46.49 | 4.40 |
805 | 852 | 2.126888 | CAACACGATTGGCGGTGC | 60.127 | 61.111 | 0.00 | 0.00 | 46.49 | 5.01 |
806 | 853 | 0.951525 | TACCAACACGATTGGCGGTG | 60.952 | 55.000 | 19.01 | 0.00 | 46.49 | 4.94 |
807 | 854 | 0.952010 | GTACCAACACGATTGGCGGT | 60.952 | 55.000 | 19.01 | 8.07 | 46.49 | 5.68 |
808 | 855 | 1.791662 | GTACCAACACGATTGGCGG | 59.208 | 57.895 | 19.01 | 3.03 | 46.49 | 6.13 |
809 | 856 | 1.418367 | CGTACCAACACGATTGGCG | 59.582 | 57.895 | 19.01 | 13.21 | 44.69 | 5.69 |
810 | 857 | 1.641123 | CCCGTACCAACACGATTGGC | 61.641 | 60.000 | 19.01 | 6.85 | 44.69 | 4.52 |
811 | 858 | 1.022451 | CCCCGTACCAACACGATTGG | 61.022 | 60.000 | 17.93 | 17.93 | 44.69 | 3.16 |
812 | 859 | 1.641123 | GCCCCGTACCAACACGATTG | 61.641 | 60.000 | 0.00 | 0.00 | 44.69 | 2.67 |
813 | 860 | 1.376295 | GCCCCGTACCAACACGATT | 60.376 | 57.895 | 0.00 | 0.00 | 44.69 | 3.34 |
814 | 861 | 1.906105 | ATGCCCCGTACCAACACGAT | 61.906 | 55.000 | 0.00 | 0.00 | 44.69 | 3.73 |
815 | 862 | 2.510064 | GATGCCCCGTACCAACACGA | 62.510 | 60.000 | 0.00 | 0.00 | 44.69 | 4.35 |
816 | 863 | 2.046700 | ATGCCCCGTACCAACACG | 60.047 | 61.111 | 0.00 | 0.00 | 41.59 | 4.49 |
817 | 864 | 1.747745 | GGATGCCCCGTACCAACAC | 60.748 | 63.158 | 0.00 | 0.00 | 0.00 | 3.32 |
818 | 865 | 2.191786 | CTGGATGCCCCGTACCAACA | 62.192 | 60.000 | 0.00 | 0.00 | 37.93 | 3.33 |
819 | 866 | 1.451387 | CTGGATGCCCCGTACCAAC | 60.451 | 63.158 | 0.00 | 0.00 | 37.93 | 3.77 |
820 | 867 | 1.921346 | ACTGGATGCCCCGTACCAA | 60.921 | 57.895 | 0.00 | 0.00 | 37.93 | 3.67 |
821 | 868 | 2.285069 | ACTGGATGCCCCGTACCA | 60.285 | 61.111 | 0.00 | 0.00 | 37.93 | 3.25 |
822 | 869 | 2.189521 | CACTGGATGCCCCGTACC | 59.810 | 66.667 | 0.00 | 0.00 | 37.93 | 3.34 |
823 | 870 | 2.189521 | CCACTGGATGCCCCGTAC | 59.810 | 66.667 | 0.00 | 0.00 | 37.93 | 3.67 |
824 | 871 | 2.039787 | TCCACTGGATGCCCCGTA | 59.960 | 61.111 | 0.00 | 0.00 | 37.93 | 4.02 |
825 | 872 | 3.717294 | GTCCACTGGATGCCCCGT | 61.717 | 66.667 | 0.00 | 0.00 | 37.93 | 5.28 |
826 | 873 | 4.489771 | GGTCCACTGGATGCCCCG | 62.490 | 72.222 | 0.00 | 0.00 | 37.93 | 5.73 |
827 | 874 | 2.917897 | TTGGTCCACTGGATGCCCC | 61.918 | 63.158 | 0.00 | 0.00 | 32.73 | 5.80 |
828 | 875 | 1.678970 | GTTGGTCCACTGGATGCCC | 60.679 | 63.158 | 0.00 | 0.00 | 32.73 | 5.36 |
829 | 876 | 1.678970 | GGTTGGTCCACTGGATGCC | 60.679 | 63.158 | 0.00 | 0.00 | 32.73 | 4.40 |
847 | 894 | 2.512515 | GCTGGTAAGCTCGGCCTG | 60.513 | 66.667 | 0.00 | 0.00 | 46.60 | 4.85 |
859 | 906 | 0.340208 | AGGTAGCCCTAGAAGCTGGT | 59.660 | 55.000 | 15.25 | 0.24 | 40.19 | 4.00 |
1145 | 1242 | 0.744771 | GATGCAGGGAACGGGAGAAC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1185 | 1282 | 1.066587 | CCGAGATCCGACAAGCTCC | 59.933 | 63.158 | 5.32 | 0.00 | 41.76 | 4.70 |
1282 | 1436 | 4.334203 | ACTGTACAAAACTGCGAATCACAA | 59.666 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
1550 | 1867 | 0.318441 | CCTTCTCGAGCAGTTCACCA | 59.682 | 55.000 | 7.81 | 0.00 | 0.00 | 4.17 |
1699 | 2055 | 7.592903 | CAGAAAGATTAAACAAAAGCAGGAGTC | 59.407 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
1771 | 2132 | 5.887598 | CCTGTTCCTGACATCCATATTTTCA | 59.112 | 40.000 | 0.00 | 0.00 | 37.69 | 2.69 |
2006 | 2372 | 1.710816 | AGTTTGCCGGATTTTTGGGA | 58.289 | 45.000 | 5.05 | 0.00 | 0.00 | 4.37 |
2010 | 2376 | 6.763610 | TCAACATTAAAGTTTGCCGGATTTTT | 59.236 | 30.769 | 5.05 | 0.07 | 0.00 | 1.94 |
2090 | 2456 | 2.940994 | TTTTCAGAACCATCCCACGA | 57.059 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2229 | 2596 | 7.229506 | GGGAGCTGCTTATACATAAGAAAATGT | 59.770 | 37.037 | 2.53 | 0.00 | 41.72 | 2.71 |
2393 | 2801 | 9.959749 | TCATAACTCGAGCAAAACTTTAAAAAT | 57.040 | 25.926 | 13.61 | 0.00 | 0.00 | 1.82 |
2410 | 2819 | 7.144661 | AGAGAAAGCAGTATCATCATAACTCG | 58.855 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
2561 | 3403 | 5.245531 | TCACAGGGTTGCTATGAGTAAAAG | 58.754 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
2615 | 3459 | 9.783081 | AACAAGTAATGATCATCTATGTATGCA | 57.217 | 29.630 | 9.06 | 0.00 | 0.00 | 3.96 |
2628 | 3474 | 8.887717 | AGAGCAGAACATAAACAAGTAATGATC | 58.112 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2636 | 3482 | 6.732531 | TGATCAGAGCAGAACATAAACAAG | 57.267 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2646 | 3492 | 2.419713 | GCAGTCCATGATCAGAGCAGAA | 60.420 | 50.000 | 0.09 | 0.00 | 0.00 | 3.02 |
2684 | 3530 | 9.132923 | AGATTTCAAGAATGATGCAATCTATGT | 57.867 | 29.630 | 0.00 | 0.00 | 45.81 | 2.29 |
2685 | 3531 | 9.613957 | GAGATTTCAAGAATGATGCAATCTATG | 57.386 | 33.333 | 0.00 | 0.00 | 45.81 | 2.23 |
2781 | 3637 | 3.141767 | ACAGAAAAGCCTAACAGGACC | 57.858 | 47.619 | 0.00 | 0.00 | 37.67 | 4.46 |
2791 | 3647 | 5.656480 | TGAAGTTTGGTTAACAGAAAAGCC | 58.344 | 37.500 | 8.10 | 0.27 | 39.30 | 4.35 |
2909 | 3765 | 3.886505 | ACCGCAACCTAAAGAATGAAACA | 59.113 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
3007 | 3867 | 9.784531 | AAATGGATGGTTATCTCATACAACTAG | 57.215 | 33.333 | 0.00 | 0.00 | 38.75 | 2.57 |
3134 | 3996 | 0.953727 | TCAAGCTGCACAACATCACC | 59.046 | 50.000 | 1.02 | 0.00 | 0.00 | 4.02 |
3296 | 4158 | 6.173339 | ACCAAGATGACGTTTCATGTAAGAT | 58.827 | 36.000 | 0.00 | 0.00 | 42.95 | 2.40 |
3302 | 4164 | 5.411361 | TCCTAAACCAAGATGACGTTTCATG | 59.589 | 40.000 | 0.00 | 0.00 | 42.95 | 3.07 |
3309 | 4171 | 3.873910 | ACCATCCTAAACCAAGATGACG | 58.126 | 45.455 | 0.91 | 0.00 | 39.84 | 4.35 |
3372 | 4234 | 6.934645 | TCTTTCACTATTACAACCTCCAACTG | 59.065 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
3374 | 4236 | 6.708949 | TGTCTTTCACTATTACAACCTCCAAC | 59.291 | 38.462 | 0.00 | 0.00 | 0.00 | 3.77 |
3686 | 4554 | 1.247567 | CACCGCCAATTTCTTCCACT | 58.752 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3764 | 4668 | 7.168219 | ACAGTCACCTATAAAGCAAATCAAGA | 58.832 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
3769 | 4673 | 6.714810 | TGACAACAGTCACCTATAAAGCAAAT | 59.285 | 34.615 | 0.00 | 0.00 | 37.36 | 2.32 |
3951 | 4855 | 7.498900 | TCAGACGATAATGGAGCATTACAAAAT | 59.501 | 33.333 | 0.00 | 0.00 | 38.83 | 1.82 |
3955 | 4861 | 5.529581 | TCAGACGATAATGGAGCATTACA | 57.470 | 39.130 | 0.00 | 0.00 | 38.83 | 2.41 |
4008 | 4920 | 1.475280 | CCCTGCACATTGACTGGAATG | 59.525 | 52.381 | 8.26 | 0.00 | 38.97 | 2.67 |
4259 | 5174 | 9.717942 | AGATGCACAATAGGACTTCTATATTTC | 57.282 | 33.333 | 0.00 | 0.00 | 37.69 | 2.17 |
4407 | 5363 | 6.769134 | TCAAATATGTCTCGAGTCCTACAA | 57.231 | 37.500 | 13.13 | 1.55 | 0.00 | 2.41 |
4459 | 5424 | 8.849490 | CATGAACACGGTTCACATATTAAAAAG | 58.151 | 33.333 | 17.86 | 0.00 | 0.00 | 2.27 |
4465 | 5430 | 4.009675 | AGCATGAACACGGTTCACATATT | 58.990 | 39.130 | 17.86 | 3.70 | 0.00 | 1.28 |
4635 | 5608 | 2.270352 | AGTCCGGCATTTTCAGACAA | 57.730 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4799 | 5772 | 4.630069 | ACACGTATTGGCAACTAGATGTTC | 59.370 | 41.667 | 0.00 | 0.00 | 36.63 | 3.18 |
4883 | 6020 | 8.954950 | AGTATATGCTATCATCATAACAAGGC | 57.045 | 34.615 | 0.00 | 0.00 | 34.22 | 4.35 |
4939 | 6077 | 2.759795 | GCCCAACCTCCTTCAGCT | 59.240 | 61.111 | 0.00 | 0.00 | 0.00 | 4.24 |
5386 | 6566 | 9.045223 | GGATTTCCTTTTAATTATGAACCATGC | 57.955 | 33.333 | 0.00 | 0.00 | 0.00 | 4.06 |
5476 | 6657 | 8.997323 | CAAATTTAAGTAATTCACCATGGCAAA | 58.003 | 29.630 | 13.04 | 6.77 | 35.39 | 3.68 |
5600 | 7439 | 5.823861 | AATTCCTGGTGGCAATTTTAGTT | 57.176 | 34.783 | 0.00 | 0.00 | 0.00 | 2.24 |
5601 | 7440 | 7.494922 | AATAATTCCTGGTGGCAATTTTAGT | 57.505 | 32.000 | 0.00 | 0.00 | 30.99 | 2.24 |
5602 | 7441 | 9.883142 | TTTAATAATTCCTGGTGGCAATTTTAG | 57.117 | 29.630 | 0.00 | 0.00 | 30.99 | 1.85 |
5604 | 7443 | 9.579932 | TTTTTAATAATTCCTGGTGGCAATTTT | 57.420 | 25.926 | 0.00 | 0.00 | 30.99 | 1.82 |
5630 | 7469 | 9.976511 | CAAACTTAATTGATGGATCATAGCATT | 57.023 | 29.630 | 0.00 | 0.00 | 36.56 | 3.56 |
5631 | 7470 | 8.086522 | GCAAACTTAATTGATGGATCATAGCAT | 58.913 | 33.333 | 0.00 | 0.00 | 36.56 | 3.79 |
5632 | 7471 | 7.428020 | GCAAACTTAATTGATGGATCATAGCA | 58.572 | 34.615 | 0.00 | 0.00 | 36.56 | 3.49 |
5633 | 7472 | 6.865205 | GGCAAACTTAATTGATGGATCATAGC | 59.135 | 38.462 | 0.00 | 0.00 | 36.56 | 2.97 |
5634 | 7473 | 7.944061 | TGGCAAACTTAATTGATGGATCATAG | 58.056 | 34.615 | 0.00 | 0.00 | 36.56 | 2.23 |
5635 | 7474 | 7.894753 | TGGCAAACTTAATTGATGGATCATA | 57.105 | 32.000 | 0.00 | 0.00 | 36.56 | 2.15 |
5636 | 7475 | 6.795144 | TGGCAAACTTAATTGATGGATCAT | 57.205 | 33.333 | 0.00 | 0.00 | 36.56 | 2.45 |
5645 | 7484 | 8.545229 | TTAATTGACCATGGCAAACTTAATTG | 57.455 | 30.769 | 20.56 | 0.00 | 0.00 | 2.32 |
6097 | 8174 | 6.188407 | AGCAGAGTATGTACAAGACTCCTTA | 58.812 | 40.000 | 26.13 | 1.94 | 40.44 | 2.69 |
6453 | 8573 | 5.466728 | GTGCACAGAAAACTAGTCTTCATCA | 59.533 | 40.000 | 13.17 | 1.07 | 0.00 | 3.07 |
6512 | 8633 | 1.261480 | ACAGAGACCGTCTTCTGCAT | 58.739 | 50.000 | 19.56 | 6.60 | 30.64 | 3.96 |
6570 | 8691 | 1.962807 | CAACCATGAAACCCAAGCAGA | 59.037 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
6592 | 8713 | 3.113745 | CTAAAGCATGCTGCCCCG | 58.886 | 61.111 | 23.48 | 4.66 | 46.52 | 5.73 |
6685 | 8807 | 8.969121 | TTCGTATGATAAACTAGACGAACAAA | 57.031 | 30.769 | 7.45 | 0.00 | 42.45 | 2.83 |
6750 | 8872 | 3.306472 | AAGGGCAAAGGACTAACACAA | 57.694 | 42.857 | 0.00 | 0.00 | 0.00 | 3.33 |
6758 | 8880 | 7.285629 | AGCTATCTTAATTAAAGGGCAAAGGAC | 59.714 | 37.037 | 0.00 | 0.00 | 35.75 | 3.85 |
6759 | 8881 | 7.285401 | CAGCTATCTTAATTAAAGGGCAAAGGA | 59.715 | 37.037 | 0.00 | 0.00 | 35.75 | 3.36 |
6833 | 8955 | 0.385473 | CGACGGGCAAACACATTGTC | 60.385 | 55.000 | 0.00 | 0.00 | 43.10 | 3.18 |
6870 | 8992 | 6.038271 | GTCATCGGCACCTAAGAAAATACATT | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
6880 | 9002 | 3.802948 | AGTTAGTCATCGGCACCTAAG | 57.197 | 47.619 | 0.00 | 0.00 | 0.00 | 2.18 |
6936 | 9065 | 5.633830 | AATGGCTAGTTCATGTCAGTTTG | 57.366 | 39.130 | 0.00 | 0.00 | 0.00 | 2.93 |
6957 | 9086 | 5.999205 | TTTCTGAGGTATACCAACCGTAA | 57.001 | 39.130 | 23.87 | 10.48 | 44.77 | 3.18 |
6958 | 9087 | 5.657745 | TCATTTCTGAGGTATACCAACCGTA | 59.342 | 40.000 | 23.87 | 5.54 | 44.77 | 4.02 |
6970 | 9099 | 3.476552 | TCTTGCGTTTCATTTCTGAGGT | 58.523 | 40.909 | 0.00 | 0.00 | 31.68 | 3.85 |
7024 | 9153 | 3.595138 | ACCCTAGGTCTACAGTACTTCCA | 59.405 | 47.826 | 8.29 | 0.00 | 0.00 | 3.53 |
7025 | 9154 | 4.248174 | ACCCTAGGTCTACAGTACTTCC | 57.752 | 50.000 | 8.29 | 0.00 | 0.00 | 3.46 |
7026 | 9155 | 6.183360 | GCTAAACCCTAGGTCTACAGTACTTC | 60.183 | 46.154 | 8.29 | 0.00 | 33.12 | 3.01 |
7027 | 9156 | 5.655974 | GCTAAACCCTAGGTCTACAGTACTT | 59.344 | 44.000 | 8.29 | 0.00 | 33.12 | 2.24 |
7028 | 9157 | 5.199723 | GCTAAACCCTAGGTCTACAGTACT | 58.800 | 45.833 | 8.29 | 0.00 | 33.12 | 2.73 |
7029 | 9158 | 4.340666 | GGCTAAACCCTAGGTCTACAGTAC | 59.659 | 50.000 | 8.29 | 0.00 | 33.12 | 2.73 |
7030 | 9159 | 4.540715 | GGCTAAACCCTAGGTCTACAGTA | 58.459 | 47.826 | 8.29 | 0.00 | 33.12 | 2.74 |
7031 | 9160 | 3.372897 | GGCTAAACCCTAGGTCTACAGT | 58.627 | 50.000 | 8.29 | 0.00 | 33.12 | 3.55 |
7032 | 9161 | 2.361438 | CGGCTAAACCCTAGGTCTACAG | 59.639 | 54.545 | 8.29 | 0.00 | 33.12 | 2.74 |
7033 | 9162 | 2.291800 | ACGGCTAAACCCTAGGTCTACA | 60.292 | 50.000 | 8.29 | 0.00 | 33.12 | 2.74 |
7034 | 9163 | 2.382882 | ACGGCTAAACCCTAGGTCTAC | 58.617 | 52.381 | 8.29 | 0.00 | 33.12 | 2.59 |
7035 | 9164 | 2.762327 | CAACGGCTAAACCCTAGGTCTA | 59.238 | 50.000 | 8.29 | 0.00 | 33.12 | 2.59 |
7036 | 9165 | 1.553704 | CAACGGCTAAACCCTAGGTCT | 59.446 | 52.381 | 8.29 | 0.00 | 33.12 | 3.85 |
7037 | 9166 | 2.010544 | GCAACGGCTAAACCCTAGGTC | 61.011 | 57.143 | 8.29 | 0.00 | 33.40 | 3.85 |
7038 | 9167 | 0.035725 | GCAACGGCTAAACCCTAGGT | 60.036 | 55.000 | 8.29 | 0.00 | 35.32 | 3.08 |
7039 | 9168 | 2.776659 | GCAACGGCTAAACCCTAGG | 58.223 | 57.895 | 0.06 | 0.06 | 36.96 | 3.02 |
7050 | 9179 | 0.958382 | TGGGTGACAATAGCAACGGC | 60.958 | 55.000 | 0.00 | 0.00 | 41.61 | 5.68 |
7051 | 9180 | 0.802494 | GTGGGTGACAATAGCAACGG | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
7052 | 9181 | 0.802494 | GGTGGGTGACAATAGCAACG | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
7053 | 9182 | 1.812571 | CTGGTGGGTGACAATAGCAAC | 59.187 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
7054 | 9183 | 1.886222 | GCTGGTGGGTGACAATAGCAA | 60.886 | 52.381 | 0.00 | 0.00 | 39.07 | 3.91 |
7055 | 9184 | 0.322456 | GCTGGTGGGTGACAATAGCA | 60.322 | 55.000 | 0.00 | 0.00 | 39.07 | 3.49 |
7056 | 9185 | 1.032114 | GGCTGGTGGGTGACAATAGC | 61.032 | 60.000 | 0.00 | 0.00 | 38.73 | 2.97 |
7057 | 9186 | 0.394352 | GGGCTGGTGGGTGACAATAG | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 1.73 |
7058 | 9187 | 1.688811 | GGGCTGGTGGGTGACAATA | 59.311 | 57.895 | 0.00 | 0.00 | 0.00 | 1.90 |
7059 | 9188 | 2.440599 | GGGCTGGTGGGTGACAAT | 59.559 | 61.111 | 0.00 | 0.00 | 0.00 | 2.71 |
7060 | 9189 | 3.897122 | GGGGCTGGTGGGTGACAA | 61.897 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
7061 | 9190 | 4.918360 | AGGGGCTGGTGGGTGACA | 62.918 | 66.667 | 0.00 | 0.00 | 0.00 | 3.58 |
7062 | 9191 | 4.351054 | CAGGGGCTGGTGGGTGAC | 62.351 | 72.222 | 0.00 | 0.00 | 0.00 | 3.67 |
7063 | 9192 | 4.918360 | ACAGGGGCTGGTGGGTGA | 62.918 | 66.667 | 0.00 | 0.00 | 35.51 | 4.02 |
7064 | 9193 | 3.902112 | AACAGGGGCTGGTGGGTG | 61.902 | 66.667 | 0.00 | 0.00 | 35.51 | 4.61 |
7065 | 9194 | 3.902112 | CAACAGGGGCTGGTGGGT | 61.902 | 66.667 | 0.00 | 0.00 | 44.58 | 4.51 |
7069 | 9198 | 1.462238 | AGACTCAACAGGGGCTGGT | 60.462 | 57.895 | 0.00 | 0.00 | 35.51 | 4.00 |
7070 | 9199 | 1.298014 | GAGACTCAACAGGGGCTGG | 59.702 | 63.158 | 0.00 | 0.00 | 35.51 | 4.85 |
7071 | 9200 | 1.298014 | GGAGACTCAACAGGGGCTG | 59.702 | 63.158 | 4.53 | 0.00 | 37.52 | 4.85 |
7072 | 9201 | 1.920835 | GGGAGACTCAACAGGGGCT | 60.921 | 63.158 | 4.53 | 0.00 | 0.00 | 5.19 |
7073 | 9202 | 2.190488 | CTGGGAGACTCAACAGGGGC | 62.190 | 65.000 | 15.13 | 0.00 | 0.00 | 5.80 |
7074 | 9203 | 1.557269 | CCTGGGAGACTCAACAGGGG | 61.557 | 65.000 | 26.31 | 11.67 | 45.21 | 4.79 |
7075 | 9204 | 1.986413 | CCTGGGAGACTCAACAGGG | 59.014 | 63.158 | 26.31 | 14.47 | 45.21 | 4.45 |
7077 | 9206 | 1.824230 | CTCTCCTGGGAGACTCAACAG | 59.176 | 57.143 | 14.64 | 15.71 | 45.26 | 3.16 |
7078 | 9207 | 1.930251 | CTCTCCTGGGAGACTCAACA | 58.070 | 55.000 | 14.64 | 1.95 | 45.26 | 3.33 |
7079 | 9208 | 0.534873 | GCTCTCCTGGGAGACTCAAC | 59.465 | 60.000 | 14.64 | 0.00 | 45.26 | 3.18 |
7080 | 9209 | 0.616111 | GGCTCTCCTGGGAGACTCAA | 60.616 | 60.000 | 14.64 | 0.00 | 45.26 | 3.02 |
7081 | 9210 | 1.000993 | GGCTCTCCTGGGAGACTCA | 59.999 | 63.158 | 14.64 | 0.00 | 45.26 | 3.41 |
7082 | 9211 | 1.760480 | GGGCTCTCCTGGGAGACTC | 60.760 | 68.421 | 14.64 | 8.76 | 45.26 | 3.36 |
7083 | 9212 | 2.366570 | GGGCTCTCCTGGGAGACT | 59.633 | 66.667 | 14.64 | 0.00 | 45.26 | 3.24 |
7084 | 9213 | 2.766229 | GGGGCTCTCCTGGGAGAC | 60.766 | 72.222 | 14.64 | 11.61 | 45.26 | 3.36 |
7100 | 9229 | 4.247380 | GAGATCAGGCCGGGCAGG | 62.247 | 72.222 | 31.59 | 21.50 | 44.97 | 4.85 |
7101 | 9230 | 4.598894 | CGAGATCAGGCCGGGCAG | 62.599 | 72.222 | 31.59 | 23.44 | 0.00 | 4.85 |
7103 | 9232 | 3.385749 | TTTCGAGATCAGGCCGGGC | 62.386 | 63.158 | 22.67 | 22.67 | 0.00 | 6.13 |
7104 | 9233 | 1.227380 | CTTTCGAGATCAGGCCGGG | 60.227 | 63.158 | 2.18 | 0.00 | 0.00 | 5.73 |
7105 | 9234 | 0.807667 | CACTTTCGAGATCAGGCCGG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
7106 | 9235 | 0.807667 | CCACTTTCGAGATCAGGCCG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
7107 | 9236 | 0.537188 | TCCACTTTCGAGATCAGGCC | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
7108 | 9237 | 2.478831 | GATCCACTTTCGAGATCAGGC | 58.521 | 52.381 | 6.71 | 0.00 | 37.07 | 4.85 |
7109 | 9238 | 2.697751 | AGGATCCACTTTCGAGATCAGG | 59.302 | 50.000 | 15.82 | 1.33 | 38.52 | 3.86 |
7110 | 9239 | 3.636300 | AGAGGATCCACTTTCGAGATCAG | 59.364 | 47.826 | 15.82 | 0.00 | 38.52 | 2.90 |
7111 | 9240 | 3.636679 | AGAGGATCCACTTTCGAGATCA | 58.363 | 45.455 | 15.82 | 0.00 | 38.52 | 2.92 |
7112 | 9241 | 5.067936 | TGTTAGAGGATCCACTTTCGAGATC | 59.932 | 44.000 | 17.39 | 0.00 | 36.49 | 2.75 |
7113 | 9242 | 4.956700 | TGTTAGAGGATCCACTTTCGAGAT | 59.043 | 41.667 | 17.39 | 0.00 | 33.66 | 2.75 |
7114 | 9243 | 4.341487 | TGTTAGAGGATCCACTTTCGAGA | 58.659 | 43.478 | 17.39 | 0.00 | 33.66 | 4.04 |
7115 | 9244 | 4.720649 | TGTTAGAGGATCCACTTTCGAG | 57.279 | 45.455 | 17.39 | 0.00 | 33.66 | 4.04 |
7116 | 9245 | 4.709886 | TCATGTTAGAGGATCCACTTTCGA | 59.290 | 41.667 | 17.39 | 4.96 | 33.66 | 3.71 |
7117 | 9246 | 5.011090 | TCATGTTAGAGGATCCACTTTCG | 57.989 | 43.478 | 17.39 | 2.77 | 33.66 | 3.46 |
7118 | 9247 | 6.644347 | TCTTCATGTTAGAGGATCCACTTTC | 58.356 | 40.000 | 17.39 | 10.87 | 33.66 | 2.62 |
7119 | 9248 | 6.627087 | TCTTCATGTTAGAGGATCCACTTT | 57.373 | 37.500 | 17.39 | 0.00 | 33.66 | 2.66 |
7120 | 9249 | 6.352565 | CCTTCTTCATGTTAGAGGATCCACTT | 60.353 | 42.308 | 17.39 | 2.46 | 33.66 | 3.16 |
7121 | 9250 | 5.130145 | CCTTCTTCATGTTAGAGGATCCACT | 59.870 | 44.000 | 16.41 | 16.41 | 33.66 | 4.00 |
7122 | 9251 | 5.363939 | CCTTCTTCATGTTAGAGGATCCAC | 58.636 | 45.833 | 15.82 | 8.01 | 33.66 | 4.02 |
7123 | 9252 | 4.410228 | CCCTTCTTCATGTTAGAGGATCCA | 59.590 | 45.833 | 15.82 | 0.00 | 33.66 | 3.41 |
7124 | 9253 | 4.656112 | TCCCTTCTTCATGTTAGAGGATCC | 59.344 | 45.833 | 2.48 | 2.48 | 33.66 | 3.36 |
7125 | 9254 | 5.878406 | TCCCTTCTTCATGTTAGAGGATC | 57.122 | 43.478 | 9.94 | 0.00 | 0.00 | 3.36 |
7126 | 9255 | 5.728741 | ACTTCCCTTCTTCATGTTAGAGGAT | 59.271 | 40.000 | 9.94 | 0.00 | 0.00 | 3.24 |
7127 | 9256 | 5.094387 | ACTTCCCTTCTTCATGTTAGAGGA | 58.906 | 41.667 | 9.94 | 7.48 | 0.00 | 3.71 |
7128 | 9257 | 5.046304 | TGACTTCCCTTCTTCATGTTAGAGG | 60.046 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
7129 | 9258 | 5.872070 | GTGACTTCCCTTCTTCATGTTAGAG | 59.128 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
7130 | 9259 | 5.280011 | GGTGACTTCCCTTCTTCATGTTAGA | 60.280 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
7131 | 9260 | 4.938226 | GGTGACTTCCCTTCTTCATGTTAG | 59.062 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
7132 | 9261 | 4.597507 | AGGTGACTTCCCTTCTTCATGTTA | 59.402 | 41.667 | 0.00 | 0.00 | 37.44 | 2.41 |
7133 | 9262 | 3.395941 | AGGTGACTTCCCTTCTTCATGTT | 59.604 | 43.478 | 0.00 | 0.00 | 37.44 | 2.71 |
7134 | 9263 | 2.982488 | AGGTGACTTCCCTTCTTCATGT | 59.018 | 45.455 | 0.00 | 0.00 | 37.44 | 3.21 |
7135 | 9264 | 3.710209 | AGGTGACTTCCCTTCTTCATG | 57.290 | 47.619 | 0.00 | 0.00 | 37.44 | 3.07 |
7136 | 9265 | 4.323868 | GCTTAGGTGACTTCCCTTCTTCAT | 60.324 | 45.833 | 0.00 | 0.00 | 43.67 | 2.57 |
7137 | 9266 | 3.008049 | GCTTAGGTGACTTCCCTTCTTCA | 59.992 | 47.826 | 0.00 | 0.00 | 43.67 | 3.02 |
7138 | 9267 | 3.262151 | AGCTTAGGTGACTTCCCTTCTTC | 59.738 | 47.826 | 0.00 | 0.00 | 43.67 | 2.87 |
7139 | 9268 | 3.252351 | AGCTTAGGTGACTTCCCTTCTT | 58.748 | 45.455 | 0.00 | 0.00 | 43.67 | 2.52 |
7140 | 9269 | 2.909217 | AGCTTAGGTGACTTCCCTTCT | 58.091 | 47.619 | 0.00 | 0.00 | 43.67 | 2.85 |
7141 | 9270 | 3.514309 | TGTAGCTTAGGTGACTTCCCTTC | 59.486 | 47.826 | 0.00 | 0.00 | 43.67 | 3.46 |
7142 | 9271 | 3.517612 | TGTAGCTTAGGTGACTTCCCTT | 58.482 | 45.455 | 0.00 | 0.00 | 43.67 | 3.95 |
7143 | 9272 | 3.185880 | TGTAGCTTAGGTGACTTCCCT | 57.814 | 47.619 | 0.00 | 0.00 | 43.67 | 4.20 |
7144 | 9273 | 3.975168 | TTGTAGCTTAGGTGACTTCCC | 57.025 | 47.619 | 0.00 | 0.00 | 43.67 | 3.97 |
7145 | 9274 | 4.876679 | GGAATTGTAGCTTAGGTGACTTCC | 59.123 | 45.833 | 0.00 | 0.00 | 43.67 | 3.46 |
7146 | 9275 | 4.876679 | GGGAATTGTAGCTTAGGTGACTTC | 59.123 | 45.833 | 0.00 | 0.00 | 43.67 | 3.01 |
7147 | 9276 | 4.536489 | AGGGAATTGTAGCTTAGGTGACTT | 59.464 | 41.667 | 0.00 | 0.00 | 43.67 | 3.01 |
7149 | 9278 | 4.489306 | AGGGAATTGTAGCTTAGGTGAC | 57.511 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
7150 | 9279 | 5.724854 | AGTTAGGGAATTGTAGCTTAGGTGA | 59.275 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7151 | 9280 | 5.990668 | AGTTAGGGAATTGTAGCTTAGGTG | 58.009 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
7152 | 9281 | 6.352823 | GGAAGTTAGGGAATTGTAGCTTAGGT | 60.353 | 42.308 | 0.00 | 0.00 | 0.00 | 3.08 |
7153 | 9282 | 6.056236 | GGAAGTTAGGGAATTGTAGCTTAGG | 58.944 | 44.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7154 | 9283 | 6.056236 | GGGAAGTTAGGGAATTGTAGCTTAG | 58.944 | 44.000 | 0.00 | 0.00 | 0.00 | 2.18 |
7155 | 9284 | 5.729718 | AGGGAAGTTAGGGAATTGTAGCTTA | 59.270 | 40.000 | 0.00 | 0.00 | 0.00 | 3.09 |
7156 | 9285 | 4.540502 | AGGGAAGTTAGGGAATTGTAGCTT | 59.459 | 41.667 | 0.00 | 0.00 | 0.00 | 3.74 |
7157 | 9286 | 4.112331 | AGGGAAGTTAGGGAATTGTAGCT | 58.888 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
7158 | 9287 | 4.452825 | GAGGGAAGTTAGGGAATTGTAGC | 58.547 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
7159 | 9288 | 4.722279 | AGGAGGGAAGTTAGGGAATTGTAG | 59.278 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
7160 | 9289 | 4.706616 | AGGAGGGAAGTTAGGGAATTGTA | 58.293 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
7161 | 9290 | 3.542604 | AGGAGGGAAGTTAGGGAATTGT | 58.457 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
7162 | 9291 | 4.018415 | TGAAGGAGGGAAGTTAGGGAATTG | 60.018 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
7163 | 9292 | 4.018324 | GTGAAGGAGGGAAGTTAGGGAATT | 60.018 | 45.833 | 0.00 | 0.00 | 0.00 | 2.17 |
7164 | 9293 | 3.523972 | GTGAAGGAGGGAAGTTAGGGAAT | 59.476 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
7165 | 9294 | 2.910977 | GTGAAGGAGGGAAGTTAGGGAA | 59.089 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
7166 | 9295 | 2.113777 | AGTGAAGGAGGGAAGTTAGGGA | 59.886 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
7167 | 9296 | 2.552367 | AGTGAAGGAGGGAAGTTAGGG | 58.448 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
7168 | 9297 | 4.041691 | TGAAAGTGAAGGAGGGAAGTTAGG | 59.958 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
7169 | 9298 | 5.228945 | TGAAAGTGAAGGAGGGAAGTTAG | 57.771 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
7170 | 9299 | 5.843019 | ATGAAAGTGAAGGAGGGAAGTTA | 57.157 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
7171 | 9300 | 4.731313 | ATGAAAGTGAAGGAGGGAAGTT | 57.269 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
7172 | 9301 | 5.488919 | TCATATGAAAGTGAAGGAGGGAAGT | 59.511 | 40.000 | 1.98 | 0.00 | 0.00 | 3.01 |
7173 | 9302 | 5.994250 | TCATATGAAAGTGAAGGAGGGAAG | 58.006 | 41.667 | 1.98 | 0.00 | 0.00 | 3.46 |
7174 | 9303 | 6.581388 | ATCATATGAAAGTGAAGGAGGGAA | 57.419 | 37.500 | 9.99 | 0.00 | 0.00 | 3.97 |
7175 | 9304 | 6.581388 | AATCATATGAAAGTGAAGGAGGGA | 57.419 | 37.500 | 9.99 | 0.00 | 0.00 | 4.20 |
7176 | 9305 | 8.752005 | TTAAATCATATGAAAGTGAAGGAGGG | 57.248 | 34.615 | 9.99 | 0.00 | 0.00 | 4.30 |
7246 | 9375 | 9.405587 | GTTTGTATGCAACTTTTGTACATGTAT | 57.594 | 29.630 | 9.18 | 0.00 | 33.82 | 2.29 |
7247 | 9376 | 8.406297 | TGTTTGTATGCAACTTTTGTACATGTA | 58.594 | 29.630 | 0.08 | 0.08 | 33.82 | 2.29 |
7248 | 9377 | 7.261325 | TGTTTGTATGCAACTTTTGTACATGT | 58.739 | 30.769 | 2.69 | 2.69 | 33.82 | 3.21 |
7249 | 9378 | 7.691430 | TGTTTGTATGCAACTTTTGTACATG | 57.309 | 32.000 | 0.00 | 0.00 | 33.82 | 3.21 |
7250 | 9379 | 8.709386 | TTTGTTTGTATGCAACTTTTGTACAT | 57.291 | 26.923 | 0.00 | 0.00 | 33.82 | 2.29 |
7251 | 9380 | 8.534333 | TTTTGTTTGTATGCAACTTTTGTACA | 57.466 | 26.923 | 0.00 | 0.00 | 33.82 | 2.90 |
7252 | 9381 | 9.980780 | AATTTTGTTTGTATGCAACTTTTGTAC | 57.019 | 25.926 | 0.00 | 0.00 | 33.82 | 2.90 |
7257 | 9386 | 9.336171 | ACCATAATTTTGTTTGTATGCAACTTT | 57.664 | 25.926 | 0.00 | 0.00 | 33.82 | 2.66 |
7258 | 9387 | 8.772705 | CACCATAATTTTGTTTGTATGCAACTT | 58.227 | 29.630 | 0.00 | 0.00 | 33.82 | 2.66 |
7259 | 9388 | 7.930865 | ACACCATAATTTTGTTTGTATGCAACT | 59.069 | 29.630 | 0.00 | 0.00 | 33.82 | 3.16 |
7260 | 9389 | 8.082334 | ACACCATAATTTTGTTTGTATGCAAC | 57.918 | 30.769 | 0.00 | 0.00 | 33.82 | 4.17 |
7261 | 9390 | 9.764363 | TTACACCATAATTTTGTTTGTATGCAA | 57.236 | 25.926 | 0.00 | 0.00 | 0.00 | 4.08 |
7262 | 9391 | 9.935241 | ATTACACCATAATTTTGTTTGTATGCA | 57.065 | 25.926 | 0.00 | 0.00 | 0.00 | 3.96 |
7325 | 9454 | 9.603189 | AGCTAGGGTAACATTGTATTATCTACT | 57.397 | 33.333 | 0.00 | 0.00 | 39.74 | 2.57 |
7328 | 9457 | 7.661847 | GCAAGCTAGGGTAACATTGTATTATCT | 59.338 | 37.037 | 0.00 | 0.00 | 39.74 | 1.98 |
7329 | 9458 | 7.444183 | TGCAAGCTAGGGTAACATTGTATTATC | 59.556 | 37.037 | 0.00 | 0.00 | 39.74 | 1.75 |
7330 | 9459 | 7.287061 | TGCAAGCTAGGGTAACATTGTATTAT | 58.713 | 34.615 | 0.00 | 0.00 | 39.74 | 1.28 |
7331 | 9460 | 6.654959 | TGCAAGCTAGGGTAACATTGTATTA | 58.345 | 36.000 | 0.00 | 0.00 | 39.74 | 0.98 |
7332 | 9461 | 5.505780 | TGCAAGCTAGGGTAACATTGTATT | 58.494 | 37.500 | 0.00 | 0.00 | 39.74 | 1.89 |
7333 | 9462 | 5.110814 | TGCAAGCTAGGGTAACATTGTAT | 57.889 | 39.130 | 0.00 | 0.00 | 39.74 | 2.29 |
7334 | 9463 | 4.561500 | TGCAAGCTAGGGTAACATTGTA | 57.438 | 40.909 | 0.00 | 0.00 | 39.74 | 2.41 |
7335 | 9464 | 3.433306 | TGCAAGCTAGGGTAACATTGT | 57.567 | 42.857 | 0.00 | 0.00 | 39.74 | 2.71 |
7336 | 9465 | 4.158394 | ACAATGCAAGCTAGGGTAACATTG | 59.842 | 41.667 | 10.37 | 10.37 | 45.14 | 2.82 |
7337 | 9466 | 4.344104 | ACAATGCAAGCTAGGGTAACATT | 58.656 | 39.130 | 0.00 | 0.00 | 39.74 | 2.71 |
7338 | 9467 | 3.968265 | ACAATGCAAGCTAGGGTAACAT | 58.032 | 40.909 | 0.00 | 0.00 | 39.74 | 2.71 |
7339 | 9468 | 3.433306 | ACAATGCAAGCTAGGGTAACA | 57.567 | 42.857 | 0.00 | 0.00 | 39.74 | 2.41 |
7340 | 9469 | 3.312697 | GCTACAATGCAAGCTAGGGTAAC | 59.687 | 47.826 | 0.75 | 0.00 | 35.80 | 2.50 |
7341 | 9470 | 3.541632 | GCTACAATGCAAGCTAGGGTAA | 58.458 | 45.455 | 0.75 | 0.00 | 35.80 | 2.85 |
7342 | 9471 | 3.194005 | GCTACAATGCAAGCTAGGGTA | 57.806 | 47.619 | 0.75 | 0.00 | 35.80 | 3.69 |
7343 | 9472 | 2.044123 | GCTACAATGCAAGCTAGGGT | 57.956 | 50.000 | 0.75 | 0.00 | 35.80 | 4.34 |
7349 | 9478 | 1.131883 | CACCTGAGCTACAATGCAAGC | 59.868 | 52.381 | 0.00 | 0.00 | 39.08 | 4.01 |
7350 | 9479 | 2.417933 | GTCACCTGAGCTACAATGCAAG | 59.582 | 50.000 | 0.00 | 0.00 | 34.99 | 4.01 |
7351 | 9480 | 2.038952 | AGTCACCTGAGCTACAATGCAA | 59.961 | 45.455 | 0.00 | 0.00 | 34.99 | 4.08 |
7352 | 9481 | 1.625315 | AGTCACCTGAGCTACAATGCA | 59.375 | 47.619 | 0.00 | 0.00 | 34.99 | 3.96 |
7353 | 9482 | 2.393271 | AGTCACCTGAGCTACAATGC | 57.607 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
7354 | 9483 | 3.686726 | GGAAAGTCACCTGAGCTACAATG | 59.313 | 47.826 | 0.00 | 0.00 | 0.00 | 2.82 |
7355 | 9484 | 3.584848 | AGGAAAGTCACCTGAGCTACAAT | 59.415 | 43.478 | 0.00 | 0.00 | 36.30 | 2.71 |
7356 | 9485 | 2.972713 | AGGAAAGTCACCTGAGCTACAA | 59.027 | 45.455 | 0.00 | 0.00 | 36.30 | 2.41 |
7357 | 9486 | 2.563179 | GAGGAAAGTCACCTGAGCTACA | 59.437 | 50.000 | 0.00 | 0.00 | 37.93 | 2.74 |
7358 | 9487 | 2.093921 | GGAGGAAAGTCACCTGAGCTAC | 60.094 | 54.545 | 0.00 | 0.00 | 37.93 | 3.58 |
7359 | 9488 | 2.180276 | GGAGGAAAGTCACCTGAGCTA | 58.820 | 52.381 | 0.00 | 0.00 | 37.93 | 3.32 |
7360 | 9489 | 0.980423 | GGAGGAAAGTCACCTGAGCT | 59.020 | 55.000 | 0.00 | 0.00 | 37.93 | 4.09 |
7361 | 9490 | 0.980423 | AGGAGGAAAGTCACCTGAGC | 59.020 | 55.000 | 0.00 | 0.00 | 37.93 | 4.26 |
7362 | 9491 | 4.891992 | TTAAGGAGGAAAGTCACCTGAG | 57.108 | 45.455 | 0.00 | 0.00 | 37.93 | 3.35 |
7363 | 9492 | 4.597507 | ACATTAAGGAGGAAAGTCACCTGA | 59.402 | 41.667 | 0.00 | 0.00 | 37.93 | 3.86 |
7364 | 9493 | 4.911390 | ACATTAAGGAGGAAAGTCACCTG | 58.089 | 43.478 | 0.00 | 0.00 | 37.93 | 4.00 |
7365 | 9494 | 5.584551 | AACATTAAGGAGGAAAGTCACCT | 57.415 | 39.130 | 0.00 | 0.00 | 40.80 | 4.00 |
7366 | 9495 | 6.708285 | TCTAACATTAAGGAGGAAAGTCACC | 58.292 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7367 | 9496 | 6.819146 | CCTCTAACATTAAGGAGGAAAGTCAC | 59.181 | 42.308 | 0.00 | 0.00 | 45.79 | 3.67 |
7368 | 9497 | 6.947464 | CCTCTAACATTAAGGAGGAAAGTCA | 58.053 | 40.000 | 0.00 | 0.00 | 45.79 | 3.41 |
7375 | 9504 | 5.604650 | AGTGGATCCTCTAACATTAAGGAGG | 59.395 | 44.000 | 14.73 | 0.00 | 42.28 | 4.30 |
7376 | 9505 | 6.739331 | AGTGGATCCTCTAACATTAAGGAG | 57.261 | 41.667 | 14.73 | 0.00 | 42.28 | 3.69 |
7377 | 9506 | 6.099845 | GGAAGTGGATCCTCTAACATTAAGGA | 59.900 | 42.308 | 16.52 | 0.00 | 43.13 | 3.36 |
7378 | 9507 | 6.292150 | GGAAGTGGATCCTCTAACATTAAGG | 58.708 | 44.000 | 16.52 | 0.00 | 36.50 | 2.69 |
7379 | 9508 | 6.292150 | GGGAAGTGGATCCTCTAACATTAAG | 58.708 | 44.000 | 16.52 | 0.00 | 39.57 | 1.85 |
7380 | 9509 | 5.132144 | GGGGAAGTGGATCCTCTAACATTAA | 59.868 | 44.000 | 16.52 | 0.00 | 36.98 | 1.40 |
7381 | 9510 | 4.658901 | GGGGAAGTGGATCCTCTAACATTA | 59.341 | 45.833 | 16.52 | 0.00 | 36.98 | 1.90 |
7382 | 9511 | 3.459969 | GGGGAAGTGGATCCTCTAACATT | 59.540 | 47.826 | 16.52 | 0.67 | 36.98 | 2.71 |
7383 | 9512 | 3.049344 | GGGGAAGTGGATCCTCTAACAT | 58.951 | 50.000 | 16.52 | 1.06 | 36.98 | 2.71 |
7384 | 9513 | 2.478292 | GGGGAAGTGGATCCTCTAACA | 58.522 | 52.381 | 16.52 | 0.00 | 36.98 | 2.41 |
7385 | 9514 | 1.413077 | CGGGGAAGTGGATCCTCTAAC | 59.587 | 57.143 | 16.52 | 13.01 | 37.86 | 2.34 |
7386 | 9515 | 1.289830 | TCGGGGAAGTGGATCCTCTAA | 59.710 | 52.381 | 16.52 | 0.00 | 37.86 | 2.10 |
7387 | 9516 | 0.931468 | TCGGGGAAGTGGATCCTCTA | 59.069 | 55.000 | 16.52 | 0.00 | 37.86 | 2.43 |
7388 | 9517 | 0.266152 | ATCGGGGAAGTGGATCCTCT | 59.734 | 55.000 | 14.23 | 12.34 | 37.86 | 3.69 |
7389 | 9518 | 0.682292 | GATCGGGGAAGTGGATCCTC | 59.318 | 60.000 | 14.23 | 9.81 | 39.57 | 3.71 |
7390 | 9519 | 0.266152 | AGATCGGGGAAGTGGATCCT | 59.734 | 55.000 | 14.23 | 0.00 | 39.57 | 3.24 |
7391 | 9520 | 0.682292 | GAGATCGGGGAAGTGGATCC | 59.318 | 60.000 | 4.20 | 4.20 | 37.81 | 3.36 |
7392 | 9521 | 0.315568 | CGAGATCGGGGAAGTGGATC | 59.684 | 60.000 | 0.00 | 0.00 | 37.44 | 3.36 |
7393 | 9522 | 1.749334 | GCGAGATCGGGGAAGTGGAT | 61.749 | 60.000 | 4.18 | 0.00 | 40.23 | 3.41 |
7394 | 9523 | 2.423898 | GCGAGATCGGGGAAGTGGA | 61.424 | 63.158 | 4.18 | 0.00 | 40.23 | 4.02 |
7395 | 9524 | 2.032860 | ATGCGAGATCGGGGAAGTGG | 62.033 | 60.000 | 4.18 | 0.00 | 40.23 | 4.00 |
7396 | 9525 | 0.598680 | GATGCGAGATCGGGGAAGTG | 60.599 | 60.000 | 4.18 | 0.00 | 40.23 | 3.16 |
7397 | 9526 | 0.757188 | AGATGCGAGATCGGGGAAGT | 60.757 | 55.000 | 4.18 | 0.00 | 40.23 | 3.01 |
7398 | 9527 | 0.390860 | AAGATGCGAGATCGGGGAAG | 59.609 | 55.000 | 4.18 | 0.00 | 40.23 | 3.46 |
7399 | 9528 | 0.389391 | GAAGATGCGAGATCGGGGAA | 59.611 | 55.000 | 4.18 | 0.00 | 40.23 | 3.97 |
7400 | 9529 | 1.464376 | GGAAGATGCGAGATCGGGGA | 61.464 | 60.000 | 4.18 | 0.00 | 40.23 | 4.81 |
7401 | 9530 | 1.005630 | GGAAGATGCGAGATCGGGG | 60.006 | 63.158 | 4.18 | 0.00 | 40.23 | 5.73 |
7402 | 9531 | 1.005630 | GGGAAGATGCGAGATCGGG | 60.006 | 63.158 | 4.18 | 0.00 | 40.23 | 5.14 |
7403 | 9532 | 1.005630 | GGGGAAGATGCGAGATCGG | 60.006 | 63.158 | 4.18 | 0.00 | 40.23 | 4.18 |
7404 | 9533 | 0.319383 | CTGGGGAAGATGCGAGATCG | 60.319 | 60.000 | 0.00 | 0.00 | 43.27 | 3.69 |
7405 | 9534 | 1.000731 | CTCTGGGGAAGATGCGAGATC | 59.999 | 57.143 | 0.00 | 0.00 | 33.29 | 2.75 |
7406 | 9535 | 1.047002 | CTCTGGGGAAGATGCGAGAT | 58.953 | 55.000 | 0.00 | 0.00 | 33.29 | 2.75 |
7407 | 9536 | 1.045350 | CCTCTGGGGAAGATGCGAGA | 61.045 | 60.000 | 0.00 | 0.00 | 37.23 | 4.04 |
7408 | 9537 | 1.445095 | CCTCTGGGGAAGATGCGAG | 59.555 | 63.158 | 0.00 | 0.00 | 37.23 | 5.03 |
7409 | 9538 | 2.735772 | GCCTCTGGGGAAGATGCGA | 61.736 | 63.158 | 0.00 | 0.00 | 36.90 | 5.10 |
7410 | 9539 | 2.203126 | GCCTCTGGGGAAGATGCG | 60.203 | 66.667 | 0.00 | 0.00 | 36.90 | 4.73 |
7411 | 9540 | 1.153005 | CAGCCTCTGGGGAAGATGC | 60.153 | 63.158 | 0.00 | 0.00 | 44.45 | 3.91 |
7412 | 9541 | 1.153005 | GCAGCCTCTGGGGAAGATG | 60.153 | 63.158 | 0.00 | 0.00 | 37.23 | 2.90 |
7413 | 9542 | 2.739996 | CGCAGCCTCTGGGGAAGAT | 61.740 | 63.158 | 0.00 | 0.00 | 40.11 | 2.40 |
7414 | 9543 | 3.393970 | CGCAGCCTCTGGGGAAGA | 61.394 | 66.667 | 0.00 | 0.00 | 40.11 | 2.87 |
7415 | 9544 | 3.710722 | ACGCAGCCTCTGGGGAAG | 61.711 | 66.667 | 14.02 | 0.00 | 46.52 | 3.46 |
7416 | 9545 | 4.020617 | CACGCAGCCTCTGGGGAA | 62.021 | 66.667 | 14.02 | 0.00 | 46.52 | 3.97 |
7420 | 9549 | 2.032528 | TTTCCACGCAGCCTCTGG | 59.967 | 61.111 | 0.00 | 0.00 | 31.21 | 3.86 |
7421 | 9550 | 2.037136 | CCTTTCCACGCAGCCTCTG | 61.037 | 63.158 | 0.00 | 0.00 | 34.12 | 3.35 |
7422 | 9551 | 2.348998 | CCTTTCCACGCAGCCTCT | 59.651 | 61.111 | 0.00 | 0.00 | 0.00 | 3.69 |
7423 | 9552 | 2.543067 | ATCCCTTTCCACGCAGCCTC | 62.543 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
7424 | 9553 | 2.606587 | ATCCCTTTCCACGCAGCCT | 61.607 | 57.895 | 0.00 | 0.00 | 0.00 | 4.58 |
7425 | 9554 | 2.044946 | ATCCCTTTCCACGCAGCC | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
7426 | 9555 | 2.409870 | CCATCCCTTTCCACGCAGC | 61.410 | 63.158 | 0.00 | 0.00 | 0.00 | 5.25 |
7427 | 9556 | 1.750399 | CCCATCCCTTTCCACGCAG | 60.750 | 63.158 | 0.00 | 0.00 | 0.00 | 5.18 |
7428 | 9557 | 2.354729 | CCCATCCCTTTCCACGCA | 59.645 | 61.111 | 0.00 | 0.00 | 0.00 | 5.24 |
7429 | 9558 | 2.440247 | CCCCATCCCTTTCCACGC | 60.440 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
7430 | 9559 | 2.270874 | CTCCCCCATCCCTTTCCACG | 62.271 | 65.000 | 0.00 | 0.00 | 0.00 | 4.94 |
7431 | 9560 | 1.615262 | CTCCCCCATCCCTTTCCAC | 59.385 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
7432 | 9561 | 1.622442 | CCTCCCCCATCCCTTTCCA | 60.622 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
7433 | 9562 | 1.308746 | TCCTCCCCCATCCCTTTCC | 60.309 | 63.158 | 0.00 | 0.00 | 0.00 | 3.13 |
7434 | 9563 | 1.356494 | CCTCCTCCCCCATCCCTTTC | 61.356 | 65.000 | 0.00 | 0.00 | 0.00 | 2.62 |
7435 | 9564 | 1.309102 | CCTCCTCCCCCATCCCTTT | 60.309 | 63.158 | 0.00 | 0.00 | 0.00 | 3.11 |
7436 | 9565 | 1.627017 | ATCCTCCTCCCCCATCCCTT | 61.627 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
7437 | 9566 | 2.035610 | ATCCTCCTCCCCCATCCCT | 61.036 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
7438 | 9567 | 1.540118 | GATCCTCCTCCCCCATCCC | 60.540 | 68.421 | 0.00 | 0.00 | 0.00 | 3.85 |
7439 | 9568 | 0.839853 | CAGATCCTCCTCCCCCATCC | 60.840 | 65.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7440 | 9569 | 0.192064 | TCAGATCCTCCTCCCCCATC | 59.808 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7441 | 9570 | 0.880357 | ATCAGATCCTCCTCCCCCAT | 59.120 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
7442 | 9571 | 0.649992 | AATCAGATCCTCCTCCCCCA | 59.350 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
7443 | 9572 | 2.723530 | TAATCAGATCCTCCTCCCCC | 57.276 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.