Multiple sequence alignment - TraesCS4B01G164400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G164400 chr4B 100.000 9782 0 0 1 9782 340990158 340999939 0.000000e+00 18065.0
1 TraesCS4B01G164400 chr4B 93.041 3348 204 7 4350 7672 358073594 358070251 0.000000e+00 4865.0
2 TraesCS4B01G164400 chr4B 93.553 760 48 1 21 779 402972405 402973164 0.000000e+00 1131.0
3 TraesCS4B01G164400 chr4B 96.842 475 8 3 7202 7671 340992182 340992654 0.000000e+00 787.0
4 TraesCS4B01G164400 chr4B 96.842 475 8 3 2025 2497 340997359 340997828 0.000000e+00 787.0
5 TraesCS4B01G164400 chr4B 96.421 475 15 2 2025 2497 358070726 358070252 0.000000e+00 782.0
6 TraesCS4B01G164400 chr4B 96.154 338 8 1 7339 7671 358085086 358084749 1.860000e-151 547.0
7 TraesCS4B01G164400 chr4B 90.769 195 16 2 8945 9137 58541459 58541265 9.750000e-65 259.0
8 TraesCS4B01G164400 chr4B 97.368 152 4 0 7204 7355 358090631 358090480 9.750000e-65 259.0
9 TraesCS4B01G164400 chr4B 97.368 152 4 0 2027 2178 358090631 358090480 9.750000e-65 259.0
10 TraesCS4B01G164400 chr4B 83.832 167 13 7 7337 7497 636885183 636885341 7.920000e-31 147.0
11 TraesCS4B01G164400 chr4B 81.395 129 22 1 9132 9260 73695980 73695854 4.830000e-18 104.0
12 TraesCS4B01G164400 chr4B 88.000 50 5 1 9299 9347 70067210 70067259 3.820000e-04 58.4
13 TraesCS4B01G164400 chr4B 94.595 37 2 0 9299 9335 70723213 70723249 3.820000e-04 58.4
14 TraesCS4B01G164400 chr2B 93.616 4762 264 18 2467 7204 407932912 407928167 0.000000e+00 7073.0
15 TraesCS4B01G164400 chr2B 93.379 2915 188 4 2480 5389 667235401 667238315 0.000000e+00 4309.0
16 TraesCS4B01G164400 chr2B 93.960 149 9 0 9634 9782 700738989 700739137 9.890000e-55 226.0
17 TraesCS4B01G164400 chr2B 84.496 129 20 0 9132 9260 776239591 776239463 2.870000e-25 128.0
18 TraesCS4B01G164400 chr3D 92.500 4760 317 17 2482 7204 611743602 611738846 0.000000e+00 6776.0
19 TraesCS4B01G164400 chr3D 88.873 719 68 6 31 743 556616228 556616940 0.000000e+00 874.0
20 TraesCS4B01G164400 chr3D 90.625 192 16 2 8945 9134 481212022 481211831 4.530000e-63 254.0
21 TraesCS4B01G164400 chr3D 86.250 240 19 5 8896 9134 474325054 474325280 2.110000e-61 248.0
22 TraesCS4B01G164400 chr3D 89.062 128 14 0 9133 9260 565680817 565680690 1.020000e-34 159.0
23 TraesCS4B01G164400 chr3D 86.047 129 17 1 2162 2289 383189575 383189703 4.760000e-28 137.0
24 TraesCS4B01G164400 chr3D 92.000 50 3 1 731 780 556621221 556621269 1.760000e-07 69.4
25 TraesCS4B01G164400 chr3D 96.970 33 1 0 9302 9334 26639848 26639816 1.000000e-03 56.5
26 TraesCS4B01G164400 chr6B 93.431 4491 263 16 2483 6945 159084442 159079956 0.000000e+00 6630.0
27 TraesCS4B01G164400 chr6B 94.656 2152 101 3 5528 7671 132114609 132112464 0.000000e+00 3325.0
28 TraesCS4B01G164400 chr6B 94.726 474 19 3 2025 2497 132112932 132112464 0.000000e+00 732.0
29 TraesCS4B01G164400 chr6B 94.759 477 14 2 7200 7671 132116475 132116005 0.000000e+00 732.0
30 TraesCS4B01G164400 chr4D 91.326 4796 371 19 2459 7214 36738823 36743613 0.000000e+00 6510.0
31 TraesCS4B01G164400 chr4D 87.463 2688 296 15 4547 7204 92115618 92118294 0.000000e+00 3059.0
32 TraesCS4B01G164400 chr4D 96.761 1235 35 3 779 2013 185798342 185797113 0.000000e+00 2054.0
33 TraesCS4B01G164400 chr4D 96.166 1226 38 3 7679 8896 185797112 185795888 0.000000e+00 1995.0
34 TraesCS4B01G164400 chr4D 94.792 192 10 0 9380 9571 185795597 185795406 5.740000e-77 300.0
35 TraesCS4B01G164400 chr4D 87.069 232 15 3 8904 9134 295141234 295141451 2.110000e-61 248.0
36 TraesCS4B01G164400 chr4D 88.095 126 15 0 9134 9259 499455123 499455248 6.120000e-32 150.0
37 TraesCS4B01G164400 chr4A 93.559 2950 181 7 2446 5389 735162545 735165491 0.000000e+00 4386.0
38 TraesCS4B01G164400 chr4A 95.768 1205 40 7 7670 8871 284630357 284631553 0.000000e+00 1932.0
39 TraesCS4B01G164400 chr4A 91.939 1253 55 11 777 2024 284629152 284630363 0.000000e+00 1712.0
40 TraesCS4B01G164400 chr4A 89.069 247 16 7 9380 9615 284631562 284631808 7.430000e-76 296.0
41 TraesCS4B01G164400 chr4A 84.298 242 25 7 8899 9138 372563964 372563734 3.560000e-54 224.0
42 TraesCS4B01G164400 chr4A 84.348 230 24 4 8906 9134 739312660 739312442 2.140000e-51 215.0
43 TraesCS4B01G164400 chr5A 93.411 2914 185 6 2481 5389 705524033 705526944 0.000000e+00 4311.0
44 TraesCS4B01G164400 chr5A 93.379 2915 184 7 2481 5389 534079541 534082452 0.000000e+00 4305.0
45 TraesCS4B01G164400 chr5A 92.325 1798 135 1 5418 7212 705527018 705528815 0.000000e+00 2553.0
46 TraesCS4B01G164400 chr5A 93.451 397 16 6 7282 7671 135137689 135137296 1.830000e-161 580.0
47 TraesCS4B01G164400 chr5A 88.950 362 16 8 2121 2481 135063542 135063204 9.080000e-115 425.0
48 TraesCS4B01G164400 chr5A 88.268 358 23 9 7298 7655 135063542 135063204 2.540000e-110 411.0
49 TraesCS4B01G164400 chr5A 86.441 118 14 2 9613 9729 602363542 602363658 2.870000e-25 128.0
50 TraesCS4B01G164400 chr3B 93.058 2953 195 6 2446 5389 807571560 807568609 0.000000e+00 4309.0
51 TraesCS4B01G164400 chr3B 92.500 40 2 1 9295 9334 45269392 45269354 1.000000e-03 56.5
52 TraesCS4B01G164400 chr3A 93.375 2913 189 3 2481 5389 21218165 21221077 0.000000e+00 4307.0
53 TraesCS4B01G164400 chr3A 92.090 177 12 2 7496 7671 698294023 698293848 2.110000e-61 248.0
54 TraesCS4B01G164400 chr1B 93.375 2913 189 3 2481 5389 670428605 670425693 0.000000e+00 4307.0
55 TraesCS4B01G164400 chr1B 82.718 515 58 15 3 491 45983137 45982628 7.020000e-116 429.0
56 TraesCS4B01G164400 chr1B 82.833 466 57 11 1 449 622914154 622914613 7.120000e-106 396.0
57 TraesCS4B01G164400 chr1B 91.333 150 11 2 624 773 622914937 622915084 4.630000e-48 204.0
58 TraesCS4B01G164400 chr1B 91.304 69 6 0 611 679 45982558 45982490 2.910000e-15 95.3
59 TraesCS4B01G164400 chr2D 92.853 1833 120 6 5384 7212 433204259 433202434 0.000000e+00 2649.0
60 TraesCS4B01G164400 chr2D 90.281 782 69 4 1 780 166137518 166138294 0.000000e+00 1016.0
61 TraesCS4B01G164400 chr2D 89.177 231 13 3 8904 9134 315063408 315063626 2.690000e-70 278.0
62 TraesCS4B01G164400 chr2D 87.037 108 13 1 9134 9241 2036337 2036443 4.800000e-23 121.0
63 TraesCS4B01G164400 chr2D 81.955 133 22 2 9129 9260 648101348 648101479 2.890000e-20 111.0
64 TraesCS4B01G164400 chr7B 92.492 1798 130 3 5418 7212 293076363 293078158 0.000000e+00 2567.0
65 TraesCS4B01G164400 chr7B 92.895 760 53 1 21 779 113068060 113068819 0.000000e+00 1103.0
66 TraesCS4B01G164400 chr7B 94.118 170 9 1 9614 9782 216665391 216665222 3.510000e-64 257.0
67 TraesCS4B01G164400 chr7B 87.179 234 18 5 8905 9137 579783206 579782984 1.260000e-63 255.0
68 TraesCS4B01G164400 chr7B 90.625 192 16 2 8945 9134 64575766 64575575 4.530000e-63 254.0
69 TraesCS4B01G164400 chr7B 84.242 165 13 7 7337 7495 692281372 692281215 2.200000e-31 148.0
70 TraesCS4B01G164400 chr7B 100.000 29 0 0 9306 9334 656957248 656957220 5.000000e-03 54.7
71 TraesCS4B01G164400 chr6A 92.483 1796 132 1 5420 7212 96042691 96044486 0.000000e+00 2566.0
72 TraesCS4B01G164400 chr6A 92.214 1798 135 3 5418 7212 41482252 41484047 0.000000e+00 2540.0
73 TraesCS4B01G164400 chr6A 90.625 192 16 2 8945 9134 547732295 547732104 4.530000e-63 254.0
74 TraesCS4B01G164400 chr6A 85.776 232 21 6 8904 9134 448364766 448364546 1.640000e-57 235.0
75 TraesCS4B01G164400 chr5B 92.947 950 55 10 6423 7367 540427527 540426585 0.000000e+00 1373.0
76 TraesCS4B01G164400 chr5B 87.826 230 16 3 8906 9134 455278596 455278378 9.750000e-65 259.0
77 TraesCS4B01G164400 chr5B 88.889 171 7 10 2025 2190 540426748 540426585 5.990000e-47 200.0
78 TraesCS4B01G164400 chr5B 88.889 171 8 9 2025 2190 540471824 540471660 5.990000e-47 200.0
79 TraesCS4B01G164400 chr5B 88.372 172 9 9 7201 7367 540471825 540471660 7.750000e-46 196.0
80 TraesCS4B01G164400 chr5B 88.304 171 9 9 2025 2190 540442959 540442795 2.790000e-45 195.0
81 TraesCS4B01G164400 chr5B 87.791 172 10 9 7201 7367 540442960 540442795 3.610000e-44 191.0
82 TraesCS4B01G164400 chr1A 91.410 780 63 4 1 778 341389586 341390363 0.000000e+00 1066.0
83 TraesCS4B01G164400 chr1A 83.983 231 25 2 8905 9134 532732504 532732285 2.770000e-50 211.0
84 TraesCS4B01G164400 chr1A 86.486 111 13 2 9620 9729 51256139 51256248 4.800000e-23 121.0
85 TraesCS4B01G164400 chr2A 89.159 618 63 4 163 777 683142009 683142625 0.000000e+00 767.0
86 TraesCS4B01G164400 chr2A 84.959 246 23 5 8895 9138 27936570 27936337 4.570000e-58 237.0
87 TraesCS4B01G164400 chr2A 83.333 168 22 4 9613 9780 57971693 57971532 6.120000e-32 150.0
88 TraesCS4B01G164400 chr2A 96.970 33 1 0 9302 9334 754213448 754213416 1.000000e-03 56.5
89 TraesCS4B01G164400 chr1D 90.966 321 26 3 463 781 34848562 34848243 7.020000e-116 429.0
90 TraesCS4B01G164400 chr1D 82.308 130 21 2 9132 9260 406228 406100 2.890000e-20 111.0
91 TraesCS4B01G164400 chr6D 91.282 195 15 2 8945 9137 174472925 174472731 2.090000e-66 265.0
92 TraesCS4B01G164400 chr7D 90.625 192 16 2 8945 9134 556317450 556317641 4.530000e-63 254.0
93 TraesCS4B01G164400 chr7D 88.462 130 13 2 9132 9260 588089061 588088933 1.320000e-33 156.0
94 TraesCS4B01G164400 chr7A 85.656 244 21 4 8901 9141 24381928 24381696 2.730000e-60 244.0
95 TraesCS4B01G164400 chr7A 85.656 244 21 4 8901 9141 24401687 24401455 2.730000e-60 244.0
96 TraesCS4B01G164400 chr7A 96.970 33 1 0 9302 9334 180731289 180731257 1.000000e-03 56.5
97 TraesCS4B01G164400 chrUn 85.926 135 13 6 9129 9260 101935489 101935620 1.320000e-28 139.0
98 TraesCS4B01G164400 chrUn 92.500 40 2 1 9295 9334 345547294 345547256 1.000000e-03 56.5
99 TraesCS4B01G164400 chrUn 92.500 40 2 1 9295 9334 362558939 362558901 1.000000e-03 56.5
100 TraesCS4B01G164400 chr5D 81.818 121 9 10 7383 7497 438368668 438368781 1.350000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G164400 chr4B 340990158 340999939 9781 False 18065.000000 18065 100.000000 1 9782 1 chr4B.!!$F3 9781
1 TraesCS4B01G164400 chr4B 358070251 358073594 3343 True 2823.500000 4865 94.731000 2025 7672 2 chr4B.!!$R4 5647
2 TraesCS4B01G164400 chr4B 402972405 402973164 759 False 1131.000000 1131 93.553000 21 779 1 chr4B.!!$F6 758
3 TraesCS4B01G164400 chr2B 407928167 407932912 4745 True 7073.000000 7073 93.616000 2467 7204 1 chr2B.!!$R1 4737
4 TraesCS4B01G164400 chr2B 667235401 667238315 2914 False 4309.000000 4309 93.379000 2480 5389 1 chr2B.!!$F1 2909
5 TraesCS4B01G164400 chr3D 611738846 611743602 4756 True 6776.000000 6776 92.500000 2482 7204 1 chr3D.!!$R4 4722
6 TraesCS4B01G164400 chr3D 556616228 556616940 712 False 874.000000 874 88.873000 31 743 1 chr3D.!!$F3 712
7 TraesCS4B01G164400 chr6B 159079956 159084442 4486 True 6630.000000 6630 93.431000 2483 6945 1 chr6B.!!$R1 4462
8 TraesCS4B01G164400 chr6B 132112464 132116475 4011 True 1596.333333 3325 94.713667 2025 7671 3 chr6B.!!$R2 5646
9 TraesCS4B01G164400 chr4D 36738823 36743613 4790 False 6510.000000 6510 91.326000 2459 7214 1 chr4D.!!$F1 4755
10 TraesCS4B01G164400 chr4D 92115618 92118294 2676 False 3059.000000 3059 87.463000 4547 7204 1 chr4D.!!$F2 2657
11 TraesCS4B01G164400 chr4D 185795406 185798342 2936 True 1449.666667 2054 95.906333 779 9571 3 chr4D.!!$R1 8792
12 TraesCS4B01G164400 chr4A 735162545 735165491 2946 False 4386.000000 4386 93.559000 2446 5389 1 chr4A.!!$F1 2943
13 TraesCS4B01G164400 chr4A 284629152 284631808 2656 False 1313.333333 1932 92.258667 777 9615 3 chr4A.!!$F2 8838
14 TraesCS4B01G164400 chr5A 534079541 534082452 2911 False 4305.000000 4305 93.379000 2481 5389 1 chr5A.!!$F1 2908
15 TraesCS4B01G164400 chr5A 705524033 705528815 4782 False 3432.000000 4311 92.868000 2481 7212 2 chr5A.!!$F3 4731
16 TraesCS4B01G164400 chr3B 807568609 807571560 2951 True 4309.000000 4309 93.058000 2446 5389 1 chr3B.!!$R2 2943
17 TraesCS4B01G164400 chr3A 21218165 21221077 2912 False 4307.000000 4307 93.375000 2481 5389 1 chr3A.!!$F1 2908
18 TraesCS4B01G164400 chr1B 670425693 670428605 2912 True 4307.000000 4307 93.375000 2481 5389 1 chr1B.!!$R1 2908
19 TraesCS4B01G164400 chr1B 622914154 622915084 930 False 300.000000 396 87.083000 1 773 2 chr1B.!!$F1 772
20 TraesCS4B01G164400 chr1B 45982490 45983137 647 True 262.150000 429 87.011000 3 679 2 chr1B.!!$R2 676
21 TraesCS4B01G164400 chr2D 433202434 433204259 1825 True 2649.000000 2649 92.853000 5384 7212 1 chr2D.!!$R1 1828
22 TraesCS4B01G164400 chr2D 166137518 166138294 776 False 1016.000000 1016 90.281000 1 780 1 chr2D.!!$F2 779
23 TraesCS4B01G164400 chr7B 293076363 293078158 1795 False 2567.000000 2567 92.492000 5418 7212 1 chr7B.!!$F2 1794
24 TraesCS4B01G164400 chr7B 113068060 113068819 759 False 1103.000000 1103 92.895000 21 779 1 chr7B.!!$F1 758
25 TraesCS4B01G164400 chr6A 96042691 96044486 1795 False 2566.000000 2566 92.483000 5420 7212 1 chr6A.!!$F2 1792
26 TraesCS4B01G164400 chr6A 41482252 41484047 1795 False 2540.000000 2540 92.214000 5418 7212 1 chr6A.!!$F1 1794
27 TraesCS4B01G164400 chr5B 540426585 540427527 942 True 786.500000 1373 90.918000 2025 7367 2 chr5B.!!$R2 5342
28 TraesCS4B01G164400 chr1A 341389586 341390363 777 False 1066.000000 1066 91.410000 1 778 1 chr1A.!!$F2 777
29 TraesCS4B01G164400 chr2A 683142009 683142625 616 False 767.000000 767 89.159000 163 777 1 chr2A.!!$F1 614

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 201 0.325933 TTCAGGCAGGTGATGGACTG 59.674 55.000 0.00 0.00 37.76 3.51 F
449 475 0.388649 CCATAGCCGGTCGATAGCAC 60.389 60.000 1.90 0.00 0.00 4.40 F
1301 1530 0.034767 TCCTGCTTCTTGCTCCATGG 60.035 55.000 4.97 4.97 43.37 3.66 F
2429 2659 0.101040 GCAGCTTGTGTGCAAACTGA 59.899 50.000 8.83 0.00 46.27 3.41 F
2518 2749 0.251354 TGGCATCAGAGCTTCAGGTC 59.749 55.000 0.00 0.00 42.47 3.85 F
4045 4286 0.605319 CGGCAAGCAAAGTGAGGGTA 60.605 55.000 0.00 0.00 0.00 3.69 F
4473 4715 0.321671 GCTAGGACACCAGCACTTCA 59.678 55.000 0.00 0.00 37.73 3.02 F
5756 6061 0.180406 ACTTGGACACTCACCACACC 59.820 55.000 0.00 0.00 37.13 4.16 F
6654 6990 1.078426 GCACCTGCTCCGGTACATT 60.078 57.895 0.00 0.00 34.94 2.71 F
7601 7946 0.101759 AGCAGCTTGTGTGCAAACTG 59.898 50.000 8.83 2.46 46.17 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1210 1439 1.198759 TCCAGACCGGGAGAAAAGGG 61.199 60.000 6.32 0.0 34.36 3.95 R
1323 1552 1.300971 GCGCCGGATGCATGATATGT 61.301 55.000 5.05 0.0 41.33 2.29 R
2968 3202 1.195115 CCTTGAACCGGATCTCCTCA 58.805 55.000 9.46 0.0 0.00 3.86 R
3573 3812 1.005748 CGTTGAGCTCTCCTGCACA 60.006 57.895 16.19 0.0 34.99 4.57 R
4473 4715 1.674322 CCATCTTCCGCAACCCGTT 60.674 57.895 0.00 0.0 34.38 4.44 R
5169 5414 0.241213 TCCTGTCGTCGAGCTTCTTG 59.759 55.000 0.00 0.0 0.00 3.02 R
5778 6083 0.254462 TGAACACACACTTGAGCCCA 59.746 50.000 0.00 0.0 0.00 5.36 R
6900 7236 1.839424 TCAGCATCTCACCGAGAAGA 58.161 50.000 0.00 0.0 42.27 2.87 R
8442 8800 0.392998 CCCATGAAGTGCGTAGGCTT 60.393 55.000 9.11 0.0 40.82 4.35 R
9088 9453 0.030369 CGTGCACGTATCCCTAGGTC 59.970 60.000 30.50 0.0 34.11 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 64 3.358111 TCTCCACATCTCTCTCGTTCT 57.642 47.619 0.00 0.00 0.00 3.01
108 111 5.250235 TGCTTCAGGAAGAGTATAAGTCG 57.750 43.478 13.01 0.00 40.79 4.18
111 114 6.100668 GCTTCAGGAAGAGTATAAGTCGTTT 58.899 40.000 13.01 0.00 40.79 3.60
142 168 2.502080 GTGACCACGAGACGAGCG 60.502 66.667 0.00 0.00 0.00 5.03
175 201 0.325933 TTCAGGCAGGTGATGGACTG 59.674 55.000 0.00 0.00 37.76 3.51
182 208 1.142748 GGTGATGGACTGAGCTCCG 59.857 63.158 12.15 7.55 32.22 4.63
186 212 2.914777 GATGGACTGAGCTCCGGCAC 62.915 65.000 13.49 3.13 41.70 5.01
259 285 1.469251 GGCGAGCATTCTCACGAGTTA 60.469 52.381 0.00 0.00 39.30 2.24
261 287 2.217393 GCGAGCATTCTCACGAGTTATG 59.783 50.000 0.00 1.66 39.30 1.90
264 290 1.258982 GCATTCTCACGAGTTATGCGG 59.741 52.381 15.69 0.00 37.59 5.69
289 315 3.414700 GTGTGGCTGCTCCGTTCG 61.415 66.667 0.00 0.00 37.80 3.95
295 321 3.084579 CTGCTCCGTTCGCATCAC 58.915 61.111 0.00 0.00 36.70 3.06
321 347 0.958876 CCTCGGCCACCAAGGTAAAC 60.959 60.000 2.24 0.00 40.61 2.01
325 351 1.583495 GGCCACCAAGGTAAACGCTC 61.583 60.000 0.00 0.00 40.61 5.03
388 414 2.046023 CGCAACCCAGATGGAGCA 60.046 61.111 0.00 0.00 38.17 4.26
392 418 1.100510 CAACCCAGATGGAGCATGTG 58.899 55.000 0.00 0.00 35.32 3.21
394 420 1.077285 CCCAGATGGAGCATGTGCA 60.077 57.895 7.83 0.00 45.16 4.57
395 421 0.681887 CCCAGATGGAGCATGTGCAA 60.682 55.000 7.83 0.00 45.16 4.08
396 422 0.738975 CCAGATGGAGCATGTGCAAG 59.261 55.000 7.83 0.00 45.16 4.01
397 423 0.738975 CAGATGGAGCATGTGCAAGG 59.261 55.000 7.83 0.00 45.16 3.61
403 429 1.093159 GAGCATGTGCAAGGAGGAAG 58.907 55.000 7.83 0.00 45.16 3.46
428 454 1.299648 CCTCGGTGCCATGGAAAGA 59.700 57.895 18.40 7.50 0.00 2.52
434 460 1.410083 GGTGCCATGGAAAGAGCCATA 60.410 52.381 18.40 0.00 46.70 2.74
437 463 1.613836 CCATGGAAAGAGCCATAGCC 58.386 55.000 5.56 0.00 46.70 3.93
449 475 0.388649 CCATAGCCGGTCGATAGCAC 60.389 60.000 1.90 0.00 0.00 4.40
452 478 4.865761 GCCGGTCGATAGCACGCA 62.866 66.667 1.90 0.00 34.43 5.24
453 479 2.954868 CCGGTCGATAGCACGCAC 60.955 66.667 0.00 0.00 34.43 5.34
455 481 2.224217 CGGTCGATAGCACGCACAG 61.224 63.158 0.00 0.00 0.00 3.66
456 482 2.517450 GGTCGATAGCACGCACAGC 61.517 63.158 0.00 0.00 0.00 4.40
457 483 2.202743 TCGATAGCACGCACAGCC 60.203 61.111 0.00 0.00 0.00 4.85
458 484 2.202797 CGATAGCACGCACAGCCT 60.203 61.111 0.00 0.00 0.00 4.58
459 485 1.811266 CGATAGCACGCACAGCCTT 60.811 57.895 0.00 0.00 0.00 4.35
460 486 1.717937 GATAGCACGCACAGCCTTG 59.282 57.895 0.00 0.00 0.00 3.61
461 487 2.315038 GATAGCACGCACAGCCTTGC 62.315 60.000 0.00 0.00 39.28 4.01
483 509 3.753434 CGACTGGAGGCGAGCAGT 61.753 66.667 0.00 0.00 0.00 4.40
502 528 3.717294 GCCTGGGCGGAGGAAGAA 61.717 66.667 5.41 0.00 34.69 2.52
503 529 2.269241 CCTGGGCGGAGGAAGAAC 59.731 66.667 0.00 0.00 34.69 3.01
504 530 2.269241 CTGGGCGGAGGAAGAACC 59.731 66.667 0.00 0.00 39.35 3.62
505 531 2.528127 TGGGCGGAGGAAGAACCA 60.528 61.111 0.00 0.00 42.04 3.67
506 532 1.915078 CTGGGCGGAGGAAGAACCAT 61.915 60.000 0.00 0.00 42.04 3.55
507 533 0.619255 TGGGCGGAGGAAGAACCATA 60.619 55.000 0.00 0.00 42.04 2.74
508 534 0.765510 GGGCGGAGGAAGAACCATAT 59.234 55.000 0.00 0.00 42.04 1.78
509 535 1.270893 GGGCGGAGGAAGAACCATATC 60.271 57.143 0.00 0.00 42.04 1.63
510 536 1.694696 GGCGGAGGAAGAACCATATCT 59.305 52.381 0.00 0.00 42.04 1.98
511 537 2.548920 GGCGGAGGAAGAACCATATCTG 60.549 54.545 0.00 0.00 42.04 2.90
513 539 2.965831 CGGAGGAAGAACCATATCTGGA 59.034 50.000 3.76 0.00 46.37 3.86
514 540 3.006323 CGGAGGAAGAACCATATCTGGAG 59.994 52.174 3.76 0.00 46.37 3.86
515 541 3.970640 GGAGGAAGAACCATATCTGGAGT 59.029 47.826 3.76 0.00 46.37 3.85
525 551 4.228210 ACCATATCTGGAGTTTGGTCATGT 59.772 41.667 3.76 0.00 46.37 3.21
566 592 1.279558 GGGGAAGAAGGAGAAGGTCAC 59.720 57.143 0.00 0.00 0.00 3.67
579 605 4.309950 GTCACGGGCTCACGGGTT 62.310 66.667 0.00 0.00 38.66 4.11
580 606 4.308458 TCACGGGCTCACGGGTTG 62.308 66.667 0.00 0.00 38.66 3.77
581 607 4.308458 CACGGGCTCACGGGTTGA 62.308 66.667 0.00 0.00 38.39 3.18
582 608 4.309950 ACGGGCTCACGGGTTGAC 62.310 66.667 0.00 0.00 38.39 3.18
583 609 4.308458 CGGGCTCACGGGTTGACA 62.308 66.667 0.00 0.00 0.00 3.58
588 614 1.444119 GCTCACGGGTTGACAGCAAA 61.444 55.000 0.00 0.00 35.42 3.68
589 615 1.021202 CTCACGGGTTGACAGCAAAA 58.979 50.000 0.00 0.00 35.42 2.44
590 616 1.002468 CTCACGGGTTGACAGCAAAAG 60.002 52.381 0.00 0.00 35.42 2.27
591 617 1.021202 CACGGGTTGACAGCAAAAGA 58.979 50.000 0.00 0.00 35.42 2.52
592 618 1.403679 CACGGGTTGACAGCAAAAGAA 59.596 47.619 0.00 0.00 35.42 2.52
593 619 2.096248 ACGGGTTGACAGCAAAAGAAA 58.904 42.857 0.00 0.00 35.42 2.52
594 620 2.494073 ACGGGTTGACAGCAAAAGAAAA 59.506 40.909 0.00 0.00 35.42 2.29
595 621 3.056465 ACGGGTTGACAGCAAAAGAAAAA 60.056 39.130 0.00 0.00 35.42 1.94
596 622 4.119136 CGGGTTGACAGCAAAAGAAAAAT 58.881 39.130 0.00 0.00 35.42 1.82
597 623 5.163499 ACGGGTTGACAGCAAAAGAAAAATA 60.163 36.000 0.00 0.00 35.42 1.40
631 855 3.568007 TCCAAACAATGAACTGTACCAGC 59.432 43.478 0.00 0.00 34.37 4.85
751 975 9.537852 AAAACTCGTACTATATATACCCATGGA 57.462 33.333 15.22 0.00 0.00 3.41
774 998 8.240682 TGGATAAAATTCACTATCCAAACAACG 58.759 33.333 16.13 0.00 46.82 4.10
775 999 7.220108 GGATAAAATTCACTATCCAAACAACGC 59.780 37.037 12.89 0.00 42.19 4.84
816 1040 5.389725 CCTGCTGTTTCACACAAAAACAAAG 60.390 40.000 3.38 4.32 43.78 2.77
817 1041 5.292765 TGCTGTTTCACACAAAAACAAAGA 58.707 33.333 3.38 0.00 43.78 2.52
821 1045 7.111455 GCTGTTTCACACAAAAACAAAGAAAAC 59.889 33.333 3.38 0.00 43.78 2.43
822 1046 7.410485 TGTTTCACACAAAAACAAAGAAAACC 58.590 30.769 0.00 0.00 42.09 3.27
823 1047 6.546972 TTCACACAAAAACAAAGAAAACCC 57.453 33.333 0.00 0.00 0.00 4.11
933 1162 2.906354 CTTTCCTCCACGAATCCGATT 58.094 47.619 0.00 0.00 39.50 3.34
946 1175 4.022416 CGAATCCGATTCAATCTCCTCTCT 60.022 45.833 18.95 0.00 39.22 3.10
1008 1237 4.058505 AGGGGAAGGATGGGGGCT 62.059 66.667 0.00 0.00 0.00 5.19
1023 1252 2.124695 GCTTGGATGTCCCGGGTC 60.125 66.667 22.86 16.83 37.93 4.46
1096 1325 2.814835 AACGCCGGAAAGACCACCT 61.815 57.895 5.05 0.00 38.90 4.00
1264 1493 1.980951 TTGCGCGGCTAGATTTGCTG 61.981 55.000 8.83 0.00 39.61 4.41
1269 1498 0.099436 CGGCTAGATTTGCTGTTGCC 59.901 55.000 0.00 0.00 38.71 4.52
1270 1499 1.176527 GGCTAGATTTGCTGTTGCCA 58.823 50.000 0.00 0.00 38.12 4.92
1301 1530 0.034767 TCCTGCTTCTTGCTCCATGG 60.035 55.000 4.97 4.97 43.37 3.66
1313 1542 0.320683 CTCCATGGTTCGTGTGCTCA 60.321 55.000 12.58 0.00 0.00 4.26
1381 1610 4.342378 TGAGATTAAAGATCTGGTCTCGGG 59.658 45.833 15.97 0.00 35.67 5.14
1653 1882 6.041069 CCATCCAGACTAGTAGTAAAAGGAGG 59.959 46.154 1.88 9.52 0.00 4.30
1734 1963 1.006998 TGAGCACCCATATTTTGCCCT 59.993 47.619 0.00 0.00 36.91 5.19
1756 1985 7.908601 GCCCTACTAATAAATTGTTCAAGTTCG 59.091 37.037 1.62 0.00 0.00 3.95
1826 2055 7.810658 AGAAAGTCAAGCTTGTTGTACATATG 58.189 34.615 25.19 0.00 37.52 1.78
2000 2229 7.118723 ACCAAAACAATGGCTATCAGATTCTA 58.881 34.615 0.00 0.00 44.75 2.10
2195 2424 6.937465 AGTCTTTCTCCAGTAAAAAGCCTAAG 59.063 38.462 0.00 0.00 31.55 2.18
2274 2504 4.895889 ACAGCTCATATAGTACAGCCTCAA 59.104 41.667 0.00 0.00 31.81 3.02
2282 2512 2.930950 AGTACAGCCTCAAGTTTGCAA 58.069 42.857 0.00 0.00 0.00 4.08
2289 2519 1.891150 CCTCAAGTTTGCAAGCATCCT 59.109 47.619 16.04 0.00 0.00 3.24
2340 2570 0.747255 TCACTCCTCCGAGCAATAGC 59.253 55.000 0.00 0.00 40.03 2.97
2376 2606 6.326375 CCAGTTTCTTCTACTAGTGCTAGTG 58.674 44.000 18.97 10.72 45.25 2.74
2427 2657 0.101759 CAGCAGCTTGTGTGCAAACT 59.898 50.000 8.83 0.00 43.82 2.66
2428 2658 0.101759 AGCAGCTTGTGTGCAAACTG 59.898 50.000 8.83 2.46 46.17 3.16
2429 2659 0.101040 GCAGCTTGTGTGCAAACTGA 59.899 50.000 8.83 0.00 46.27 3.41
2430 2660 1.469595 GCAGCTTGTGTGCAAACTGAA 60.470 47.619 8.83 0.00 46.27 3.02
2431 2661 2.878580 CAGCTTGTGTGCAAACTGAAA 58.121 42.857 8.83 0.00 46.27 2.69
2432 2662 2.599973 CAGCTTGTGTGCAAACTGAAAC 59.400 45.455 8.83 0.00 46.27 2.78
2436 2666 4.737054 CTTGTGTGCAAACTGAAACTCTT 58.263 39.130 8.83 0.00 33.73 2.85
2454 2684 5.326069 ACTCTTGCTAGTTCTCCTCTGTTA 58.674 41.667 0.00 0.00 0.00 2.41
2511 2742 2.686915 GCTAACAATTGGCATCAGAGCT 59.313 45.455 10.83 0.00 37.09 4.09
2518 2749 0.251354 TGGCATCAGAGCTTCAGGTC 59.749 55.000 0.00 0.00 42.47 3.85
2603 2834 3.062466 CTGAGGAGACCCGTGCGA 61.062 66.667 0.00 0.00 37.58 5.10
2813 3047 1.075482 TACGAGGAGGACCGGTTGT 59.925 57.895 9.42 0.00 41.83 3.32
2824 3058 2.264480 CGGTTGTCGATGGAGGCA 59.736 61.111 0.00 0.00 42.43 4.75
2825 3059 1.811266 CGGTTGTCGATGGAGGCAG 60.811 63.158 0.00 0.00 42.43 4.85
2940 3174 1.904865 TGGAGCGTGTACGGGAGTT 60.905 57.895 6.55 0.00 43.33 3.01
2968 3202 0.978146 AGACCTTGCGCCTCCAGTAT 60.978 55.000 4.18 0.00 0.00 2.12
3064 3298 1.645034 CAACGCTCGGAGATCACATT 58.355 50.000 9.69 0.00 33.89 2.71
3136 3370 1.607467 GCAACTGGCCTGGTCCATT 60.607 57.895 14.82 2.91 35.22 3.16
3143 3377 1.452833 GCCTGGTCCATTGAGAGCC 60.453 63.158 0.00 0.00 33.24 4.70
3267 3502 1.229625 TCACCTGGAGCAGTGGGAT 60.230 57.895 0.00 0.00 0.00 3.85
3436 3671 3.122850 GCAACAGTGGCAAGTGCT 58.877 55.556 2.85 0.00 41.70 4.40
4045 4286 0.605319 CGGCAAGCAAAGTGAGGGTA 60.605 55.000 0.00 0.00 0.00 3.69
4047 4288 1.545651 GGCAAGCAAAGTGAGGGTAGT 60.546 52.381 0.00 0.00 0.00 2.73
4147 4389 4.557605 GCGGTTCGCGGACGGATA 62.558 66.667 27.33 0.00 44.55 2.59
4194 4436 4.734134 TCGTCTTCGCCGACAAAA 57.266 50.000 0.00 0.00 36.96 2.44
4261 4503 1.215655 AAGAGCAACGTCGTGAGTGC 61.216 55.000 11.66 11.66 0.00 4.40
4473 4715 0.321671 GCTAGGACACCAGCACTTCA 59.678 55.000 0.00 0.00 37.73 3.02
4512 4754 2.357034 GAGGCAACCTCGTTCGCA 60.357 61.111 0.00 0.00 41.08 5.10
4555 4799 2.666190 AGCTGTGCGATGCGTGTT 60.666 55.556 0.00 0.00 0.00 3.32
4603 4847 1.714899 CCCCGAAAAGGCACGCTATG 61.715 60.000 0.00 0.00 39.21 2.23
4727 4971 0.827507 AACAGGTTCATGTGGGTGCC 60.828 55.000 0.00 0.00 32.52 5.01
4817 5061 4.332637 CCACAAGCTGTGCGTGCC 62.333 66.667 9.88 0.00 46.51 5.01
4878 5122 2.046892 AAGCACTGCGCCGAGAAT 60.047 55.556 4.18 0.00 44.04 2.40
4924 5168 2.428960 TTACTCGCCGCAGCAGAACA 62.429 55.000 0.00 0.00 39.83 3.18
4966 5210 4.552365 CGGTGCTCGGGATGGCAT 62.552 66.667 0.00 0.00 40.66 4.40
5074 5319 2.859273 AAGGAGCATCGACGGCAAGG 62.859 60.000 12.80 0.00 34.37 3.61
5380 5625 3.097342 ACCCGATGTACTCTACAACCT 57.903 47.619 0.00 0.00 42.76 3.50
5486 5791 1.456287 GGAGGCAGTTTGTGACCCT 59.544 57.895 0.00 0.00 32.48 4.34
5598 5903 2.124320 ACAACACCGCAACAGCCT 60.124 55.556 0.00 0.00 0.00 4.58
5600 5905 3.595758 AACACCGCAACAGCCTGC 61.596 61.111 0.00 0.00 39.04 4.85
5756 6061 0.180406 ACTTGGACACTCACCACACC 59.820 55.000 0.00 0.00 37.13 4.16
5921 6226 2.954684 CGGTGGCAAGGCTGGAGTA 61.955 63.158 0.00 0.00 0.00 2.59
5954 6259 2.786539 CTTGCCGTGGCTGCTCACTA 62.787 60.000 12.84 3.86 42.51 2.74
6039 6347 2.284995 GTCTCCCAGCCTCCAGGT 60.285 66.667 0.00 0.00 37.57 4.00
6190 6498 2.758770 TTCTGAGCACGGCGTGTACC 62.759 60.000 36.68 25.83 35.75 3.34
6521 6857 2.331805 CGCTACGCTCTACCGCAT 59.668 61.111 0.00 0.00 0.00 4.73
6654 6990 1.078426 GCACCTGCTCCGGTACATT 60.078 57.895 0.00 0.00 34.94 2.71
6695 7031 2.947621 CGTGTATCGTCGTGGCGG 60.948 66.667 0.00 0.00 34.52 6.13
6733 7069 2.338015 TACAGCGACTCCGACCACC 61.338 63.158 0.00 0.00 38.22 4.61
6764 7100 1.536662 ACTCCCGGAAGAGCACCTT 60.537 57.895 0.73 0.00 37.39 3.50
6778 7114 1.086696 CACCTTGGGCATACTGTTCG 58.913 55.000 0.00 0.00 0.00 3.95
6900 7236 2.964978 GGCATTTGGCTTGCTCGT 59.035 55.556 7.40 0.00 44.01 4.18
7138 7476 3.774702 GTCGCGTTCGGTTCCAGC 61.775 66.667 5.77 0.00 36.13 4.85
7241 7579 1.202855 ACAGGATTGAACACAGCTGCT 60.203 47.619 15.27 0.00 0.00 4.24
7500 7843 3.864921 GCACCTCCGTTGTAAATCACTCT 60.865 47.826 0.00 0.00 0.00 3.24
7534 7879 3.306973 GCAAAACAACAAGCCAGTTTCTC 59.693 43.478 0.00 0.00 34.64 2.87
7601 7946 0.101759 AGCAGCTTGTGTGCAAACTG 59.898 50.000 8.83 2.46 46.17 3.16
7857 8204 5.423886 AGACTTCACTTGCTTATTCCTAGC 58.576 41.667 0.00 0.00 39.10 3.42
7881 8228 4.389374 CAGGTCTAATGTGGTGAGTTGTT 58.611 43.478 0.00 0.00 0.00 2.83
7951 8298 1.207089 TCCTGGAAAGATGCGATCGTT 59.793 47.619 17.81 4.56 33.69 3.85
7981 8328 6.884295 TGCCACAGCTTAGTAAAACTTGATAT 59.116 34.615 0.00 0.00 40.80 1.63
8164 8511 6.042777 TGGATTCGCTATAGTTCAAACTCTG 58.957 40.000 0.84 0.00 40.37 3.35
8206 8553 3.896648 TTTGTCATTCTCCTGTTTCGC 57.103 42.857 0.00 0.00 0.00 4.70
8442 8800 3.245984 TGTGGGATCTAGGAGGACAAGAA 60.246 47.826 0.00 0.00 0.00 2.52
8475 8833 4.833380 ACTTCATGGGCGACATACTATAGT 59.167 41.667 10.87 10.87 37.84 2.12
8562 8920 4.214986 TGAGCTATTCCGGTTGATTCAA 57.785 40.909 0.00 0.00 0.00 2.69
8577 8935 6.384224 GTTGATTCAACATGCAGATCTTGAA 58.616 36.000 21.75 7.53 43.09 2.69
8643 9001 1.522355 CATGTCGGCGGCTGAGATT 60.522 57.895 17.88 2.41 0.00 2.40
8822 9180 6.036626 GTGTTTCGGTGAATTTGTTGGAAAAT 59.963 34.615 0.00 0.00 0.00 1.82
8882 9247 6.206829 GGTGTTTATTTATGCATACTCCCTCC 59.793 42.308 5.74 0.00 0.00 4.30
8890 9255 1.209747 GCATACTCCCTCCGTTCCTTT 59.790 52.381 0.00 0.00 0.00 3.11
8896 9261 4.296056 ACTCCCTCCGTTCCTTTATGTAT 58.704 43.478 0.00 0.00 0.00 2.29
8898 9263 4.035112 TCCCTCCGTTCCTTTATGTATGT 58.965 43.478 0.00 0.00 0.00 2.29
8899 9264 5.210430 TCCCTCCGTTCCTTTATGTATGTA 58.790 41.667 0.00 0.00 0.00 2.29
8900 9265 5.662208 TCCCTCCGTTCCTTTATGTATGTAA 59.338 40.000 0.00 0.00 0.00 2.41
8901 9266 5.989777 CCCTCCGTTCCTTTATGTATGTAAG 59.010 44.000 0.00 0.00 0.00 2.34
8902 9267 5.989777 CCTCCGTTCCTTTATGTATGTAAGG 59.010 44.000 0.00 0.00 39.82 2.69
8903 9268 6.407752 CCTCCGTTCCTTTATGTATGTAAGGT 60.408 42.308 0.00 0.00 39.53 3.50
8904 9269 6.342906 TCCGTTCCTTTATGTATGTAAGGTG 58.657 40.000 0.00 0.00 39.53 4.00
8905 9270 6.070653 TCCGTTCCTTTATGTATGTAAGGTGT 60.071 38.462 0.00 0.00 39.53 4.16
8906 9271 7.123997 TCCGTTCCTTTATGTATGTAAGGTGTA 59.876 37.037 0.00 0.00 39.53 2.90
8907 9272 7.223387 CCGTTCCTTTATGTATGTAAGGTGTAC 59.777 40.741 0.00 0.00 39.53 2.90
8908 9273 7.977853 CGTTCCTTTATGTATGTAAGGTGTACT 59.022 37.037 0.00 0.00 39.53 2.73
8922 9287 4.248691 GGTGTACTACCTTCGTTTCAGT 57.751 45.455 7.10 0.00 46.51 3.41
8923 9288 4.625028 GGTGTACTACCTTCGTTTCAGTT 58.375 43.478 7.10 0.00 46.51 3.16
8924 9289 5.052481 GGTGTACTACCTTCGTTTCAGTTT 58.948 41.667 7.10 0.00 46.51 2.66
8925 9290 6.215845 GGTGTACTACCTTCGTTTCAGTTTA 58.784 40.000 7.10 0.00 46.51 2.01
8926 9291 6.144563 GGTGTACTACCTTCGTTTCAGTTTAC 59.855 42.308 7.10 0.00 46.51 2.01
8927 9292 6.697019 GTGTACTACCTTCGTTTCAGTTTACA 59.303 38.462 0.00 0.00 0.00 2.41
8928 9293 7.222611 GTGTACTACCTTCGTTTCAGTTTACAA 59.777 37.037 0.00 0.00 0.00 2.41
8929 9294 6.839820 ACTACCTTCGTTTCAGTTTACAAG 57.160 37.500 0.00 0.00 0.00 3.16
8930 9295 6.343703 ACTACCTTCGTTTCAGTTTACAAGT 58.656 36.000 0.00 0.00 0.00 3.16
8931 9296 5.729974 ACCTTCGTTTCAGTTTACAAGTC 57.270 39.130 0.00 0.00 0.00 3.01
8932 9297 4.573607 ACCTTCGTTTCAGTTTACAAGTCC 59.426 41.667 0.00 0.00 0.00 3.85
8933 9298 4.814771 CCTTCGTTTCAGTTTACAAGTCCT 59.185 41.667 0.00 0.00 0.00 3.85
8934 9299 5.987347 CCTTCGTTTCAGTTTACAAGTCCTA 59.013 40.000 0.00 0.00 0.00 2.94
8935 9300 6.073927 CCTTCGTTTCAGTTTACAAGTCCTAC 60.074 42.308 0.00 0.00 0.00 3.18
8936 9301 4.977963 TCGTTTCAGTTTACAAGTCCTACG 59.022 41.667 0.00 0.00 0.00 3.51
8937 9302 4.375706 CGTTTCAGTTTACAAGTCCTACGC 60.376 45.833 0.00 0.00 0.00 4.42
8938 9303 2.937591 TCAGTTTACAAGTCCTACGCG 58.062 47.619 3.53 3.53 0.00 6.01
8939 9304 2.294233 TCAGTTTACAAGTCCTACGCGT 59.706 45.455 19.17 19.17 0.00 6.01
8940 9305 3.501828 TCAGTTTACAAGTCCTACGCGTA 59.498 43.478 19.40 19.40 0.00 4.42
8941 9306 4.156556 TCAGTTTACAAGTCCTACGCGTAT 59.843 41.667 20.91 5.41 0.00 3.06
8942 9307 5.353956 TCAGTTTACAAGTCCTACGCGTATA 59.646 40.000 20.91 8.44 0.00 1.47
8943 9308 6.038603 TCAGTTTACAAGTCCTACGCGTATAT 59.961 38.462 20.91 3.11 0.00 0.86
8944 9309 6.359087 CAGTTTACAAGTCCTACGCGTATATC 59.641 42.308 20.91 12.33 0.00 1.63
8945 9310 6.261826 AGTTTACAAGTCCTACGCGTATATCT 59.738 38.462 20.91 14.33 0.00 1.98
8946 9311 7.442364 AGTTTACAAGTCCTACGCGTATATCTA 59.558 37.037 20.91 0.00 0.00 1.98
8947 9312 5.859521 ACAAGTCCTACGCGTATATCTAG 57.140 43.478 20.91 8.56 0.00 2.43
8948 9313 4.153835 ACAAGTCCTACGCGTATATCTAGC 59.846 45.833 20.91 6.26 0.00 3.42
8960 9325 7.887996 GCGTATATCTAGCGTATATCTAGGT 57.112 40.000 10.34 7.28 35.43 3.08
8961 9326 8.309163 GCGTATATCTAGCGTATATCTAGGTT 57.691 38.462 10.34 4.27 35.43 3.50
8962 9327 8.222433 GCGTATATCTAGCGTATATCTAGGTTG 58.778 40.741 10.34 0.00 35.43 3.77
8963 9328 8.222433 CGTATATCTAGCGTATATCTAGGTTGC 58.778 40.741 10.34 0.00 35.43 4.17
8964 9329 5.838531 ATCTAGCGTATATCTAGGTTGCC 57.161 43.478 10.34 0.00 35.43 4.52
8965 9330 4.659115 TCTAGCGTATATCTAGGTTGCCA 58.341 43.478 10.34 0.00 35.43 4.92
8966 9331 5.074804 TCTAGCGTATATCTAGGTTGCCAA 58.925 41.667 10.34 0.00 35.43 4.52
8967 9332 4.891992 AGCGTATATCTAGGTTGCCAAT 57.108 40.909 0.00 0.00 0.00 3.16
8968 9333 5.228945 AGCGTATATCTAGGTTGCCAATT 57.771 39.130 0.00 0.00 0.00 2.32
8969 9334 5.621193 AGCGTATATCTAGGTTGCCAATTT 58.379 37.500 0.00 0.00 0.00 1.82
8970 9335 5.470098 AGCGTATATCTAGGTTGCCAATTTG 59.530 40.000 0.00 0.00 0.00 2.32
8971 9336 5.468746 GCGTATATCTAGGTTGCCAATTTGA 59.531 40.000 0.00 0.00 0.00 2.69
8972 9337 6.149474 GCGTATATCTAGGTTGCCAATTTGAT 59.851 38.462 0.00 0.00 0.00 2.57
8973 9338 7.624344 GCGTATATCTAGGTTGCCAATTTGATC 60.624 40.741 0.00 0.00 0.00 2.92
8974 9339 7.387673 CGTATATCTAGGTTGCCAATTTGATCA 59.612 37.037 0.00 0.00 0.00 2.92
8975 9340 5.841957 ATCTAGGTTGCCAATTTGATCAC 57.158 39.130 0.00 0.00 0.00 3.06
8976 9341 4.016444 TCTAGGTTGCCAATTTGATCACC 58.984 43.478 0.00 0.85 0.00 4.02
8977 9342 2.893424 AGGTTGCCAATTTGATCACCT 58.107 42.857 0.00 3.13 0.00 4.00
8978 9343 3.242011 AGGTTGCCAATTTGATCACCTT 58.758 40.909 0.00 0.00 0.00 3.50
8979 9344 4.415596 AGGTTGCCAATTTGATCACCTTA 58.584 39.130 0.00 0.00 0.00 2.69
8980 9345 4.837860 AGGTTGCCAATTTGATCACCTTAA 59.162 37.500 0.00 0.00 0.00 1.85
8981 9346 5.484998 AGGTTGCCAATTTGATCACCTTAAT 59.515 36.000 0.00 0.00 0.00 1.40
8982 9347 6.667414 AGGTTGCCAATTTGATCACCTTAATA 59.333 34.615 0.00 0.00 0.00 0.98
8983 9348 7.345392 AGGTTGCCAATTTGATCACCTTAATAT 59.655 33.333 0.00 0.00 0.00 1.28
8984 9349 8.637986 GGTTGCCAATTTGATCACCTTAATATA 58.362 33.333 0.00 0.00 0.00 0.86
9032 9397 8.870160 ATCGTTTGAAAATTGAACATCTGAAA 57.130 26.923 0.00 0.00 0.00 2.69
9033 9398 8.870160 TCGTTTGAAAATTGAACATCTGAAAT 57.130 26.923 0.00 0.00 0.00 2.17
9034 9399 9.311916 TCGTTTGAAAATTGAACATCTGAAATT 57.688 25.926 0.00 0.00 0.00 1.82
9035 9400 9.919348 CGTTTGAAAATTGAACATCTGAAATTT 57.081 25.926 0.00 0.00 34.54 1.82
9078 9443 9.209048 TGTAATATCTGACTTGTATTAGGTGGT 57.791 33.333 0.00 0.00 0.00 4.16
9079 9444 9.694137 GTAATATCTGACTTGTATTAGGTGGTC 57.306 37.037 0.00 0.00 0.00 4.02
9080 9445 7.914427 ATATCTGACTTGTATTAGGTGGTCA 57.086 36.000 0.00 0.00 33.56 4.02
9081 9446 6.620877 ATCTGACTTGTATTAGGTGGTCAA 57.379 37.500 0.00 0.00 34.11 3.18
9082 9447 6.428083 TCTGACTTGTATTAGGTGGTCAAA 57.572 37.500 0.00 0.00 34.11 2.69
9083 9448 7.016153 TCTGACTTGTATTAGGTGGTCAAAT 57.984 36.000 0.00 0.00 34.11 2.32
9084 9449 7.458397 TCTGACTTGTATTAGGTGGTCAAATT 58.542 34.615 0.00 0.00 34.11 1.82
9085 9450 7.390440 TCTGACTTGTATTAGGTGGTCAAATTG 59.610 37.037 0.00 0.00 34.11 2.32
9086 9451 7.227873 TGACTTGTATTAGGTGGTCAAATTGA 58.772 34.615 0.00 0.00 31.99 2.57
9087 9452 7.888021 TGACTTGTATTAGGTGGTCAAATTGAT 59.112 33.333 0.00 0.00 31.99 2.57
9088 9453 8.055279 ACTTGTATTAGGTGGTCAAATTGATG 57.945 34.615 0.00 0.00 0.00 3.07
9089 9454 7.888021 ACTTGTATTAGGTGGTCAAATTGATGA 59.112 33.333 0.00 0.00 0.00 2.92
9101 9466 5.696724 GTCAAATTGATGACCTAGGGATACG 59.303 44.000 14.81 0.00 43.11 3.06
9102 9467 5.365605 TCAAATTGATGACCTAGGGATACGT 59.634 40.000 14.81 2.94 38.83 3.57
9103 9468 4.873746 ATTGATGACCTAGGGATACGTG 57.126 45.455 14.81 0.00 35.44 4.49
9104 9469 1.961394 TGATGACCTAGGGATACGTGC 59.039 52.381 14.81 0.00 35.44 5.34
9105 9470 1.961394 GATGACCTAGGGATACGTGCA 59.039 52.381 14.81 0.00 35.44 4.57
9106 9471 1.108776 TGACCTAGGGATACGTGCAC 58.891 55.000 14.81 6.82 35.44 4.57
9107 9472 0.030369 GACCTAGGGATACGTGCACG 59.970 60.000 35.99 35.99 46.33 5.34
9108 9473 1.299926 CCTAGGGATACGTGCACGC 60.300 63.158 37.35 21.80 44.43 5.34
9109 9474 1.299926 CTAGGGATACGTGCACGCC 60.300 63.158 37.35 28.84 44.43 5.68
9110 9475 3.128632 TAGGGATACGTGCACGCCG 62.129 63.158 37.35 16.64 44.43 6.46
9111 9476 4.807039 GGGATACGTGCACGCCGT 62.807 66.667 37.35 23.63 44.43 5.68
9112 9477 3.550992 GGATACGTGCACGCCGTG 61.551 66.667 37.35 13.95 44.43 4.94
9113 9478 2.807895 GATACGTGCACGCCGTGT 60.808 61.111 37.35 20.98 44.43 4.49
9114 9479 1.514657 GATACGTGCACGCCGTGTA 60.515 57.895 37.35 22.47 44.43 2.90
9115 9480 1.072116 GATACGTGCACGCCGTGTAA 61.072 55.000 37.35 15.21 44.43 2.41
9116 9481 0.666880 ATACGTGCACGCCGTGTAAA 60.667 50.000 37.35 13.84 44.43 2.01
9117 9482 1.547292 TACGTGCACGCCGTGTAAAC 61.547 55.000 37.35 13.42 44.43 2.01
9118 9483 2.591311 CGTGCACGCCGTGTAAACT 61.591 57.895 28.16 0.00 35.75 2.66
9119 9484 1.083015 GTGCACGCCGTGTAAACTG 60.083 57.895 19.57 0.00 35.75 3.16
9120 9485 1.227292 TGCACGCCGTGTAAACTGA 60.227 52.632 19.57 0.00 35.75 3.41
9121 9486 0.810426 TGCACGCCGTGTAAACTGAA 60.810 50.000 19.57 0.00 35.75 3.02
9122 9487 0.305313 GCACGCCGTGTAAACTGAAA 59.695 50.000 19.57 0.00 35.75 2.69
9123 9488 1.659211 GCACGCCGTGTAAACTGAAAG 60.659 52.381 19.57 0.00 36.37 2.62
9124 9489 1.862201 CACGCCGTGTAAACTGAAAGA 59.138 47.619 9.53 0.00 37.43 2.52
9125 9490 2.096909 CACGCCGTGTAAACTGAAAGAG 60.097 50.000 9.53 0.00 37.43 2.85
9126 9491 2.223876 ACGCCGTGTAAACTGAAAGAGA 60.224 45.455 0.00 0.00 37.43 3.10
9127 9492 2.408704 CGCCGTGTAAACTGAAAGAGAG 59.591 50.000 0.00 0.00 37.43 3.20
9128 9493 2.737252 GCCGTGTAAACTGAAAGAGAGG 59.263 50.000 0.00 0.00 37.43 3.69
9129 9494 3.326747 CCGTGTAAACTGAAAGAGAGGG 58.673 50.000 0.00 0.00 37.43 4.30
9130 9495 3.006537 CCGTGTAAACTGAAAGAGAGGGA 59.993 47.826 0.00 0.00 37.43 4.20
9162 9527 1.308069 GCACGGTGATCAAGGCACAT 61.308 55.000 13.29 0.00 37.99 3.21
9190 9555 9.692749 ATTATAGACATGTGACGACGAAATTAT 57.307 29.630 1.15 0.00 0.00 1.28
9192 9557 5.651530 AGACATGTGACGACGAAATTATCT 58.348 37.500 1.15 0.00 0.00 1.98
9214 9579 6.045955 TCTTTGGCAAATTTGTTGGTTAGTC 58.954 36.000 19.03 0.00 0.00 2.59
9215 9580 5.344743 TTGGCAAATTTGTTGGTTAGTCA 57.655 34.783 19.03 0.00 0.00 3.41
9227 9592 7.867305 TGTTGGTTAGTCACAAGTAAATCAA 57.133 32.000 0.00 0.00 0.00 2.57
9228 9593 8.458573 TGTTGGTTAGTCACAAGTAAATCAAT 57.541 30.769 0.00 0.00 0.00 2.57
9261 9626 8.424133 AGGAAAATAAAAGATACATGCAATCCC 58.576 33.333 0.00 0.00 0.00 3.85
9262 9627 8.203485 GGAAAATAAAAGATACATGCAATCCCA 58.797 33.333 0.00 0.00 0.00 4.37
9263 9628 9.768662 GAAAATAAAAGATACATGCAATCCCAT 57.231 29.630 0.00 0.00 0.00 4.00
9328 9762 9.807921 ACCAATACACCTTATATAAAGGAATGG 57.192 33.333 10.67 11.63 39.81 3.16
9335 9769 9.586732 CACCTTATATAAAGGAATGGATGGAAA 57.413 33.333 10.67 0.00 39.81 3.13
9475 9909 9.502145 GATCGACTATATGCTTCTAAGATTCAG 57.498 37.037 0.00 0.00 0.00 3.02
9546 9981 0.659957 GCCTCATGAAGTTGGCGATC 59.340 55.000 7.85 0.00 35.79 3.69
9552 9987 0.037326 TGAAGTTGGCGATCGCTTCT 60.037 50.000 36.25 26.90 41.60 2.85
9584 10029 0.620556 GGAGATGCCTGTTTGGAGGA 59.379 55.000 0.00 0.00 38.35 3.71
9600 10045 3.119245 TGGAGGAGAATCGTAGGTTTTCG 60.119 47.826 0.00 0.00 34.37 3.46
9601 10046 3.119209 GGAGGAGAATCGTAGGTTTTCGT 60.119 47.826 0.00 0.00 34.37 3.85
9615 10060 7.116805 CGTAGGTTTTCGTCTTTGGTATTTACT 59.883 37.037 0.00 0.00 0.00 2.24
9616 10061 9.423061 GTAGGTTTTCGTCTTTGGTATTTACTA 57.577 33.333 0.00 0.00 0.00 1.82
9617 10062 8.543862 AGGTTTTCGTCTTTGGTATTTACTAG 57.456 34.615 0.00 0.00 0.00 2.57
9618 10063 7.605309 AGGTTTTCGTCTTTGGTATTTACTAGG 59.395 37.037 0.00 0.00 0.00 3.02
9619 10064 7.603784 GGTTTTCGTCTTTGGTATTTACTAGGA 59.396 37.037 0.00 0.00 0.00 2.94
9620 10065 8.438513 GTTTTCGTCTTTGGTATTTACTAGGAC 58.561 37.037 0.00 0.00 0.00 3.85
9621 10066 6.839124 TCGTCTTTGGTATTTACTAGGACA 57.161 37.500 0.00 0.00 0.00 4.02
9622 10067 7.230849 TCGTCTTTGGTATTTACTAGGACAA 57.769 36.000 0.00 0.00 0.00 3.18
9623 10068 7.669427 TCGTCTTTGGTATTTACTAGGACAAA 58.331 34.615 0.00 0.00 0.00 2.83
9624 10069 8.316214 TCGTCTTTGGTATTTACTAGGACAAAT 58.684 33.333 0.00 0.00 0.00 2.32
9625 10070 8.388103 CGTCTTTGGTATTTACTAGGACAAATG 58.612 37.037 0.00 0.00 0.00 2.32
9626 10071 8.182227 GTCTTTGGTATTTACTAGGACAAATGC 58.818 37.037 0.00 1.03 0.00 3.56
9627 10072 7.338449 TCTTTGGTATTTACTAGGACAAATGCC 59.662 37.037 18.53 18.53 43.33 4.40
9629 10074 6.119536 TGGTATTTACTAGGACAAATGCCAG 58.880 40.000 21.58 0.00 45.83 4.85
9630 10075 6.120220 GGTATTTACTAGGACAAATGCCAGT 58.880 40.000 19.57 0.00 42.86 4.00
9631 10076 6.038271 GGTATTTACTAGGACAAATGCCAGTG 59.962 42.308 19.57 0.00 42.86 3.66
9632 10077 1.826385 ACTAGGACAAATGCCAGTGC 58.174 50.000 0.00 0.00 38.26 4.40
9633 10078 0.729116 CTAGGACAAATGCCAGTGCG 59.271 55.000 0.00 0.00 41.78 5.34
9634 10079 0.036164 TAGGACAAATGCCAGTGCGT 59.964 50.000 0.00 0.00 41.78 5.24
9636 10081 0.664166 GGACAAATGCCAGTGCGTTG 60.664 55.000 0.00 0.00 45.88 4.10
9637 10082 1.277495 GACAAATGCCAGTGCGTTGC 61.277 55.000 0.00 0.00 45.88 4.17
9638 10083 1.300003 CAAATGCCAGTGCGTTGCA 60.300 52.632 0.00 0.00 45.88 4.08
9639 10084 0.668096 CAAATGCCAGTGCGTTGCAT 60.668 50.000 0.00 0.00 45.88 3.96
9640 10085 0.388907 AAATGCCAGTGCGTTGCATC 60.389 50.000 5.24 0.00 45.88 3.91
9641 10086 2.531927 AATGCCAGTGCGTTGCATCG 62.532 55.000 12.78 12.78 44.90 3.84
9642 10087 4.465512 GCCAGTGCGTTGCATCGG 62.466 66.667 18.16 3.01 41.91 4.18
9643 10088 2.741985 CCAGTGCGTTGCATCGGA 60.742 61.111 18.16 13.17 41.91 4.55
9646 10091 3.109547 GTGCGTTGCATCGGACGA 61.110 61.111 22.95 0.00 41.91 4.20
9647 10092 2.356433 TGCGTTGCATCGGACGAA 60.356 55.556 18.16 2.00 41.53 3.85
9648 10093 1.956678 TGCGTTGCATCGGACGAAA 60.957 52.632 18.16 0.38 41.53 3.46
9649 10094 1.205568 GCGTTGCATCGGACGAAAA 59.794 52.632 18.16 0.00 41.53 2.29
9650 10095 0.384974 GCGTTGCATCGGACGAAAAA 60.385 50.000 18.16 0.00 41.53 1.94
9672 10117 2.344535 GGCACAACCTGCTTCATGT 58.655 52.632 0.00 0.00 46.25 3.21
9673 10118 0.038892 GGCACAACCTGCTTCATGTG 60.039 55.000 8.32 8.32 46.25 3.21
9674 10119 0.953727 GCACAACCTGCTTCATGTGA 59.046 50.000 14.51 0.00 44.52 3.58
9675 10120 1.335324 GCACAACCTGCTTCATGTGAC 60.335 52.381 14.51 5.30 44.52 3.67
9676 10121 1.948834 CACAACCTGCTTCATGTGACA 59.051 47.619 7.26 0.00 44.52 3.58
9677 10122 2.555325 CACAACCTGCTTCATGTGACAT 59.445 45.455 0.00 0.00 44.52 3.06
9678 10123 3.005050 CACAACCTGCTTCATGTGACATT 59.995 43.478 0.00 0.00 44.52 2.71
9679 10124 4.216042 CACAACCTGCTTCATGTGACATTA 59.784 41.667 0.00 0.00 44.52 1.90
9680 10125 5.012239 ACAACCTGCTTCATGTGACATTAT 58.988 37.500 0.00 0.00 0.00 1.28
9681 10126 5.106038 ACAACCTGCTTCATGTGACATTATG 60.106 40.000 0.00 0.00 0.00 1.90
9682 10127 3.379372 ACCTGCTTCATGTGACATTATGC 59.621 43.478 9.80 9.80 0.00 3.14
9683 10128 3.379057 CCTGCTTCATGTGACATTATGCA 59.621 43.478 16.22 16.22 0.00 3.96
9684 10129 4.348656 CTGCTTCATGTGACATTATGCAC 58.651 43.478 14.01 11.04 35.63 4.57
9685 10130 3.129113 TGCTTCATGTGACATTATGCACC 59.871 43.478 14.01 2.76 34.19 5.01
9686 10131 3.129113 GCTTCATGTGACATTATGCACCA 59.871 43.478 11.34 0.52 34.19 4.17
9687 10132 4.202080 GCTTCATGTGACATTATGCACCAT 60.202 41.667 11.34 2.52 34.19 3.55
9688 10133 5.503662 TTCATGTGACATTATGCACCATC 57.496 39.130 13.92 0.00 34.19 3.51
9689 10134 4.784177 TCATGTGACATTATGCACCATCT 58.216 39.130 13.92 0.00 34.19 2.90
9690 10135 5.195185 TCATGTGACATTATGCACCATCTT 58.805 37.500 13.92 0.00 34.19 2.40
9691 10136 5.653330 TCATGTGACATTATGCACCATCTTT 59.347 36.000 13.92 0.00 34.19 2.52
9692 10137 5.981088 TGTGACATTATGCACCATCTTTT 57.019 34.783 13.92 0.00 34.19 2.27
9693 10138 7.338957 TCATGTGACATTATGCACCATCTTTTA 59.661 33.333 13.92 0.00 34.19 1.52
9694 10139 7.643569 TGTGACATTATGCACCATCTTTTAT 57.356 32.000 13.92 0.00 34.19 1.40
9695 10140 8.744568 TGTGACATTATGCACCATCTTTTATA 57.255 30.769 13.92 0.00 34.19 0.98
9696 10141 9.353431 TGTGACATTATGCACCATCTTTTATAT 57.647 29.630 13.92 0.00 34.19 0.86
9731 10176 6.753107 AAACGTCAATGATAAGGTTAAGGG 57.247 37.500 0.00 0.00 0.00 3.95
9732 10177 5.431179 ACGTCAATGATAAGGTTAAGGGT 57.569 39.130 0.00 0.00 0.00 4.34
9733 10178 5.812286 ACGTCAATGATAAGGTTAAGGGTT 58.188 37.500 0.00 0.00 0.00 4.11
9734 10179 6.949715 ACGTCAATGATAAGGTTAAGGGTTA 58.050 36.000 0.00 0.00 0.00 2.85
9735 10180 7.396418 ACGTCAATGATAAGGTTAAGGGTTAA 58.604 34.615 0.00 0.00 0.00 2.01
9736 10181 7.884354 ACGTCAATGATAAGGTTAAGGGTTAAA 59.116 33.333 0.00 0.00 0.00 1.52
9737 10182 8.732531 CGTCAATGATAAGGTTAAGGGTTAAAA 58.267 33.333 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.924462 TGTATCAGTATTTGTGAAACGCGA 59.076 37.500 15.93 0.00 42.39 5.87
61 64 6.899393 AACTAGAGCCAATGAAATGTTGAA 57.101 33.333 0.00 0.00 0.00 2.69
108 111 3.378427 GGTCACCAATGGAGCTATCAAAC 59.622 47.826 6.16 0.00 0.00 2.93
111 114 2.092968 GTGGTCACCAATGGAGCTATCA 60.093 50.000 6.16 0.00 34.18 2.15
142 168 2.224018 TGCCTGAAGGTCAAATTGTTGC 60.224 45.455 0.00 0.00 37.57 4.17
170 196 4.459089 GGTGCCGGAGCTCAGTCC 62.459 72.222 17.19 9.77 40.80 3.85
215 241 2.436646 CACCCTGACGTCCATGGC 60.437 66.667 14.12 0.96 34.32 4.40
238 264 2.202610 TCGTGAGAATGCTCGCCG 60.203 61.111 8.75 7.41 46.47 6.46
247 273 1.990799 CACCGCATAACTCGTGAGAA 58.009 50.000 3.44 0.00 41.32 2.87
285 311 2.740714 GGCCGTCTGTGATGCGAAC 61.741 63.158 0.00 0.00 0.00 3.95
289 315 2.887568 CGAGGCCGTCTGTGATGC 60.888 66.667 0.00 0.00 0.00 3.91
347 373 4.463879 CTGCCCTCGCACCTCCAG 62.464 72.222 0.00 0.00 41.12 3.86
371 397 1.452651 ATGCTCCATCTGGGTTGCG 60.453 57.895 0.00 0.00 39.06 4.85
375 401 1.077212 GCACATGCTCCATCTGGGT 60.077 57.895 0.00 0.00 38.11 4.51
381 407 0.395311 CCTCCTTGCACATGCTCCAT 60.395 55.000 5.31 0.00 42.66 3.41
382 408 1.001764 CCTCCTTGCACATGCTCCA 60.002 57.895 5.31 0.00 42.66 3.86
388 414 1.251251 GTTGCTTCCTCCTTGCACAT 58.749 50.000 0.00 0.00 36.37 3.21
392 418 1.578206 GGTCGTTGCTTCCTCCTTGC 61.578 60.000 0.00 0.00 0.00 4.01
394 420 0.321996 GAGGTCGTTGCTTCCTCCTT 59.678 55.000 0.00 0.00 41.09 3.36
395 421 1.878656 CGAGGTCGTTGCTTCCTCCT 61.879 60.000 0.00 0.00 43.20 3.69
396 422 1.446272 CGAGGTCGTTGCTTCCTCC 60.446 63.158 0.00 0.00 43.20 4.30
397 423 1.446272 CCGAGGTCGTTGCTTCCTC 60.446 63.158 0.00 0.00 42.83 3.71
421 447 1.271840 ACCGGCTATGGCTCTTTCCA 61.272 55.000 0.00 0.00 40.97 3.53
428 454 1.878656 GCTATCGACCGGCTATGGCT 61.879 60.000 0.00 0.00 38.73 4.75
433 459 3.028130 CGTGCTATCGACCGGCTA 58.972 61.111 0.00 0.00 0.00 3.93
434 460 4.570663 GCGTGCTATCGACCGGCT 62.571 66.667 0.00 0.00 0.00 5.52
437 463 2.202557 TGTGCGTGCTATCGACCG 60.203 61.111 0.00 0.00 0.00 4.79
483 509 2.764128 CTTCCTCCGCCCAGGCTA 60.764 66.667 7.17 0.00 40.77 3.93
487 513 1.915078 ATGGTTCTTCCTCCGCCCAG 61.915 60.000 0.00 0.00 37.07 4.45
488 514 0.619255 TATGGTTCTTCCTCCGCCCA 60.619 55.000 0.00 0.00 37.07 5.36
489 515 0.765510 ATATGGTTCTTCCTCCGCCC 59.234 55.000 0.00 0.00 37.07 6.13
490 516 1.694696 AGATATGGTTCTTCCTCCGCC 59.305 52.381 0.00 0.00 37.07 6.13
491 517 2.548920 CCAGATATGGTTCTTCCTCCGC 60.549 54.545 0.00 0.00 37.07 5.54
492 518 2.965831 TCCAGATATGGTTCTTCCTCCG 59.034 50.000 6.21 0.00 37.07 4.63
493 519 3.970640 ACTCCAGATATGGTTCTTCCTCC 59.029 47.826 6.21 0.00 37.07 4.30
494 520 5.622346 AACTCCAGATATGGTTCTTCCTC 57.378 43.478 6.21 0.00 37.07 3.71
495 521 5.339530 CCAAACTCCAGATATGGTTCTTCCT 60.340 44.000 6.21 0.00 37.07 3.36
496 522 4.884164 CCAAACTCCAGATATGGTTCTTCC 59.116 45.833 6.21 0.00 0.00 3.46
497 523 5.501156 ACCAAACTCCAGATATGGTTCTTC 58.499 41.667 6.21 0.00 41.47 2.87
498 524 5.014123 TGACCAAACTCCAGATATGGTTCTT 59.986 40.000 6.21 0.00 44.12 2.52
499 525 4.536090 TGACCAAACTCCAGATATGGTTCT 59.464 41.667 6.21 0.00 44.12 3.01
500 526 4.843728 TGACCAAACTCCAGATATGGTTC 58.156 43.478 6.21 0.00 44.12 3.62
501 527 4.927267 TGACCAAACTCCAGATATGGTT 57.073 40.909 6.21 0.00 44.12 3.67
502 528 4.228210 ACATGACCAAACTCCAGATATGGT 59.772 41.667 6.21 0.00 46.63 3.55
503 529 4.785301 ACATGACCAAACTCCAGATATGG 58.215 43.478 0.00 0.00 37.19 2.74
504 530 6.586344 AGTACATGACCAAACTCCAGATATG 58.414 40.000 0.00 0.00 0.00 1.78
505 531 6.613271 AGAGTACATGACCAAACTCCAGATAT 59.387 38.462 0.00 0.00 39.33 1.63
506 532 5.958380 AGAGTACATGACCAAACTCCAGATA 59.042 40.000 0.00 0.00 39.33 1.98
507 533 4.780021 AGAGTACATGACCAAACTCCAGAT 59.220 41.667 0.00 0.00 39.33 2.90
508 534 4.160329 AGAGTACATGACCAAACTCCAGA 58.840 43.478 0.00 0.00 39.33 3.86
509 535 4.499183 GAGAGTACATGACCAAACTCCAG 58.501 47.826 0.00 0.00 39.33 3.86
510 536 3.056821 CGAGAGTACATGACCAAACTCCA 60.057 47.826 0.00 0.00 39.33 3.86
511 537 3.056749 ACGAGAGTACATGACCAAACTCC 60.057 47.826 0.00 0.00 46.88 3.85
512 538 4.175787 ACGAGAGTACATGACCAAACTC 57.824 45.455 0.00 4.44 46.88 3.01
547 573 1.066787 CGTGACCTTCTCCTTCTTCCC 60.067 57.143 0.00 0.00 0.00 3.97
549 575 1.066787 CCCGTGACCTTCTCCTTCTTC 60.067 57.143 0.00 0.00 0.00 2.87
550 576 0.977395 CCCGTGACCTTCTCCTTCTT 59.023 55.000 0.00 0.00 0.00 2.52
551 577 1.545706 GCCCGTGACCTTCTCCTTCT 61.546 60.000 0.00 0.00 0.00 2.85
566 592 4.308458 TGTCAACCCGTGAGCCCG 62.308 66.667 0.00 0.00 36.74 6.13
577 603 8.634475 ACTCTTATTTTTCTTTTGCTGTCAAC 57.366 30.769 0.00 0.00 30.75 3.18
579 605 7.706179 CCAACTCTTATTTTTCTTTTGCTGTCA 59.294 33.333 0.00 0.00 0.00 3.58
580 606 7.306807 GCCAACTCTTATTTTTCTTTTGCTGTC 60.307 37.037 0.00 0.00 0.00 3.51
581 607 6.479990 GCCAACTCTTATTTTTCTTTTGCTGT 59.520 34.615 0.00 0.00 0.00 4.40
582 608 6.703165 AGCCAACTCTTATTTTTCTTTTGCTG 59.297 34.615 0.00 0.00 0.00 4.41
583 609 6.820335 AGCCAACTCTTATTTTTCTTTTGCT 58.180 32.000 0.00 0.00 0.00 3.91
643 867 6.937465 AGAAAACTTTGTTTGGGTTAGCAAAA 59.063 30.769 0.00 0.00 31.61 2.44
694 918 9.273016 TGAATTTTCACAAAACCAGTTTTACAA 57.727 25.926 8.12 0.14 35.28 2.41
695 919 8.833231 TGAATTTTCACAAAACCAGTTTTACA 57.167 26.923 8.12 0.00 35.28 2.41
696 920 7.902917 GCTGAATTTTCACAAAACCAGTTTTAC 59.097 33.333 8.12 0.00 37.04 2.01
704 928 8.664798 AGTTTTTAGCTGAATTTTCACAAAACC 58.335 29.630 0.00 6.04 32.37 3.27
710 934 8.068380 AGTACGAGTTTTTAGCTGAATTTTCAC 58.932 33.333 0.00 0.00 32.90 3.18
711 935 8.149973 AGTACGAGTTTTTAGCTGAATTTTCA 57.850 30.769 0.00 0.00 35.57 2.69
751 975 7.033185 GGCGTTGTTTGGATAGTGAATTTTAT 58.967 34.615 0.00 0.00 0.00 1.40
775 999 0.546598 AGGATTTGCCGTCCCTTAGG 59.453 55.000 0.00 0.00 43.43 2.69
816 1040 1.878088 GACAGAAACTCGGGGGTTTTC 59.122 52.381 0.00 0.00 39.20 2.29
817 1041 1.493446 AGACAGAAACTCGGGGGTTTT 59.507 47.619 0.00 0.00 39.20 2.43
821 1045 0.321653 CCAAGACAGAAACTCGGGGG 60.322 60.000 0.00 0.00 0.00 5.40
822 1046 0.396811 ACCAAGACAGAAACTCGGGG 59.603 55.000 0.00 0.00 0.00 5.73
823 1047 2.143925 GAACCAAGACAGAAACTCGGG 58.856 52.381 0.00 0.00 0.00 5.14
881 1110 2.170273 GAAAAGGTGTCGTCGCGC 59.830 61.111 0.00 0.00 0.00 6.86
933 1162 1.648568 AGGGGACAGAGAGGAGATTGA 59.351 52.381 0.00 0.00 0.00 2.57
946 1175 1.917495 TCGGATCTACGAGGGGACA 59.083 57.895 0.00 0.00 38.06 4.02
1008 1237 2.297895 CCAGACCCGGGACATCCAA 61.298 63.158 32.02 0.00 37.91 3.53
1023 1252 1.453155 CCGGGAACATGAGAAACCAG 58.547 55.000 0.00 0.00 0.00 4.00
1210 1439 1.198759 TCCAGACCGGGAGAAAAGGG 61.199 60.000 6.32 0.00 34.36 3.95
1264 1493 4.626042 CAGGATCTGAGTATACTGGCAAC 58.374 47.826 10.90 0.00 34.62 4.17
1269 1498 6.215121 CAAGAAGCAGGATCTGAGTATACTG 58.785 44.000 10.90 0.00 40.31 2.74
1270 1499 5.221422 GCAAGAAGCAGGATCTGAGTATACT 60.221 44.000 4.68 4.68 44.79 2.12
1323 1552 1.300971 GCGCCGGATGCATGATATGT 61.301 55.000 5.05 0.00 41.33 2.29
1381 1610 7.093245 ACTCTTTTGTATCTCCTAACCCTCTTC 60.093 40.741 0.00 0.00 0.00 2.87
1552 1781 9.883142 GATAGGCAAATCTAAGCTACTCAATAT 57.117 33.333 0.00 0.00 0.00 1.28
1756 1985 3.620488 TCCTTATTGGCATGTCTGTTCC 58.380 45.455 0.00 0.00 35.26 3.62
1764 1993 5.794726 TGGATCATTTCCTTATTGGCATG 57.205 39.130 0.00 0.00 45.68 4.06
1826 2055 8.487176 CAGTTCCACTATTGTGTTAAATTTTGC 58.513 33.333 6.55 0.00 42.34 3.68
2018 2247 1.822371 GGGTTTGACACAACAGTTGGT 59.178 47.619 17.76 11.93 34.12 3.67
2019 2248 1.821753 TGGGTTTGACACAACAGTTGG 59.178 47.619 17.76 8.92 34.12 3.77
2020 2249 2.491693 ACTGGGTTTGACACAACAGTTG 59.508 45.455 12.03 12.03 40.39 3.16
2021 2250 2.752903 GACTGGGTTTGACACAACAGTT 59.247 45.455 0.00 0.00 42.21 3.16
2022 2251 2.026262 AGACTGGGTTTGACACAACAGT 60.026 45.455 0.00 0.00 43.82 3.55
2023 2252 2.643551 AGACTGGGTTTGACACAACAG 58.356 47.619 0.00 0.00 37.72 3.16
2024 2253 2.799126 AGACTGGGTTTGACACAACA 57.201 45.000 0.00 0.00 26.79 3.33
2025 2254 3.537580 TGTAGACTGGGTTTGACACAAC 58.462 45.455 0.00 0.00 26.79 3.32
2026 2255 3.433031 CCTGTAGACTGGGTTTGACACAA 60.433 47.826 0.00 0.00 26.79 3.33
2027 2256 2.104111 CCTGTAGACTGGGTTTGACACA 59.896 50.000 0.00 0.00 0.00 3.72
2028 2257 2.367567 TCCTGTAGACTGGGTTTGACAC 59.632 50.000 5.82 0.00 35.87 3.67
2029 2258 2.684943 TCCTGTAGACTGGGTTTGACA 58.315 47.619 5.82 0.00 35.87 3.58
2260 2490 4.286297 TGCAAACTTGAGGCTGTACTAT 57.714 40.909 0.00 0.00 0.00 2.12
2263 2493 2.605580 GCTTGCAAACTTGAGGCTGTAC 60.606 50.000 0.00 0.00 0.00 2.90
2289 2519 5.769662 CAGAGGTGCATATGCCCTTTTATAA 59.230 40.000 27.96 6.79 40.28 0.98
2312 2542 3.616560 GCTCGGAGGAGTGATTTACAACA 60.617 47.826 7.20 0.00 42.53 3.33
2340 2570 5.170748 AGAAGAAACTGGCTTGTTGTTTTG 58.829 37.500 0.00 0.00 34.55 2.44
2427 2657 4.835615 AGAGGAGAACTAGCAAGAGTTTCA 59.164 41.667 0.00 0.00 39.79 2.69
2428 2658 5.167845 CAGAGGAGAACTAGCAAGAGTTTC 58.832 45.833 0.00 1.91 39.79 2.78
2429 2659 4.591072 ACAGAGGAGAACTAGCAAGAGTTT 59.409 41.667 0.00 0.00 39.79 2.66
2430 2660 4.156477 ACAGAGGAGAACTAGCAAGAGTT 58.844 43.478 0.00 0.00 42.42 3.01
2431 2661 3.773560 ACAGAGGAGAACTAGCAAGAGT 58.226 45.455 0.00 0.00 0.00 3.24
2432 2662 4.799564 AACAGAGGAGAACTAGCAAGAG 57.200 45.455 0.00 0.00 0.00 2.85
2436 2666 4.833380 ACACTTAACAGAGGAGAACTAGCA 59.167 41.667 0.00 0.00 0.00 3.49
2454 2684 5.793030 AACTAGCTCTCACTTGTACACTT 57.207 39.130 0.00 0.00 0.00 3.16
2511 2742 4.301505 GCTTCGGCATGACCTGAA 57.698 55.556 0.00 5.32 41.33 3.02
2813 3047 1.219124 GCAAGACTGCCTCCATCGA 59.781 57.895 0.00 0.00 43.26 3.59
2824 3058 2.293318 TGGGATGGAGCGCAAGACT 61.293 57.895 11.47 0.00 43.02 3.24
2825 3059 2.109126 GTGGGATGGAGCGCAAGAC 61.109 63.158 11.47 0.00 43.02 3.01
2940 3174 2.436109 GCAAGGTCTGGGCCTTCA 59.564 61.111 4.53 0.00 46.33 3.02
2968 3202 1.195115 CCTTGAACCGGATCTCCTCA 58.805 55.000 9.46 0.00 0.00 3.86
3017 3251 2.038814 TTGACGAGACCTTGCAGCCA 62.039 55.000 0.00 0.00 0.00 4.75
3064 3298 4.971939 TGAGAATCACCATCTTGTTGTCA 58.028 39.130 0.00 0.00 42.56 3.58
3414 3649 2.441717 TTGCCACTGTTGCCAGCA 60.442 55.556 1.07 0.00 42.81 4.41
3436 3671 2.509111 CGGCATGTCGCAGTAGCA 60.509 61.111 6.84 0.00 45.17 3.49
3510 3749 2.032681 GCCTGGACGAGGTTTGCT 59.967 61.111 5.32 0.00 44.97 3.91
3573 3812 1.005748 CGTTGAGCTCTCCTGCACA 60.006 57.895 16.19 0.00 34.99 4.57
3893 4132 4.263572 TTGTCGGGGTGTGGCTGG 62.264 66.667 0.00 0.00 0.00 4.85
4045 4286 2.030562 CGCCGGTGTCAGGAAACT 59.969 61.111 6.91 0.00 46.44 2.66
4194 4436 3.402681 CGCCCTGTGATCACCCCT 61.403 66.667 22.85 0.00 0.00 4.79
4249 4491 4.338539 GTCCGGCACTCACGACGT 62.339 66.667 0.00 0.00 0.00 4.34
4261 4503 2.178521 CCTCGTCGAGTTGTCCGG 59.821 66.667 20.37 0.00 0.00 5.14
4473 4715 1.674322 CCATCTTCCGCAACCCGTT 60.674 57.895 0.00 0.00 34.38 4.44
4512 4754 1.729470 CGTGCTCGATGAGGTAGCCT 61.729 60.000 1.00 0.00 39.71 4.58
4576 4820 2.740121 CCTTTTCGGGGAAAGGCAA 58.260 52.632 5.57 0.00 46.48 4.52
4581 4825 2.557372 GCGTGCCTTTTCGGGGAAA 61.557 57.895 0.00 0.00 0.00 3.13
4603 4847 2.030412 CAAGGGTTTTTGCGCCCC 59.970 61.111 10.42 10.42 45.95 5.80
4611 4855 1.063266 TGAACCAGCTCCAAGGGTTTT 60.063 47.619 6.84 0.00 44.56 2.43
4679 4923 0.898320 AACGAGCAGCAGGATGTAGT 59.102 50.000 0.00 0.00 39.31 2.73
5169 5414 0.241213 TCCTGTCGTCGAGCTTCTTG 59.759 55.000 0.00 0.00 0.00 3.02
5335 5580 0.471617 ACAGTGAAGGAGCTGCTTGT 59.528 50.000 26.42 14.80 36.26 3.16
5501 5806 4.717629 CGGCGTCGAACAGCTCCA 62.718 66.667 1.44 0.00 39.00 3.86
5551 5856 1.840650 CGAGGAGATCCCCCATGCT 60.841 63.158 4.76 0.00 36.42 3.79
5598 5903 0.389817 CATCAACGTCCTCTTCCGCA 60.390 55.000 0.00 0.00 0.00 5.69
5600 5905 1.630148 GTCATCAACGTCCTCTTCCG 58.370 55.000 0.00 0.00 0.00 4.30
5710 6015 1.170442 TCGTTGATCGACACCAGCTA 58.830 50.000 13.58 0.00 44.01 3.32
5778 6083 0.254462 TGAACACACACTTGAGCCCA 59.746 50.000 0.00 0.00 0.00 5.36
5790 6095 3.541632 GTCCTTCTTGACCTTGAACACA 58.458 45.455 0.00 0.00 0.00 3.72
5921 6226 2.434884 CAAGGATGAGCCGCACGT 60.435 61.111 0.00 0.00 43.43 4.49
5954 6259 2.605601 GGTGTACCTCCCACCCGT 60.606 66.667 0.00 0.00 45.43 5.28
6039 6347 4.569279 TGGCTCTTGGCAACGAAA 57.431 50.000 0.00 0.00 46.03 3.46
6258 6566 2.202623 CGAACCTCTTCGGGCTCG 60.203 66.667 0.00 0.00 44.73 5.03
6521 6857 1.117749 CCTGAGGCTCCCGATGATGA 61.118 60.000 12.86 0.00 0.00 2.92
6733 7069 2.657237 GGAGTCCACGTCACCAGG 59.343 66.667 3.60 0.00 0.00 4.45
6764 7100 2.422597 CAAGAACGAACAGTATGCCCA 58.577 47.619 0.00 0.00 42.53 5.36
6847 7183 3.411418 CTGCCGCGATGTACTCCGT 62.411 63.158 8.23 0.00 0.00 4.69
6900 7236 1.839424 TCAGCATCTCACCGAGAAGA 58.161 50.000 0.00 0.00 42.27 2.87
7138 7476 2.162921 CTGACCTTGTCGCGCAGTTG 62.163 60.000 8.75 0.00 34.95 3.16
7500 7843 3.316588 TGTTGTTTTGCTATTGCTCGGAA 59.683 39.130 0.00 0.00 40.48 4.30
7601 7946 6.096282 ACAGAGGAGAACTAGCTAGATGTTTC 59.904 42.308 27.45 18.59 0.00 2.78
7725 8070 3.064207 CGGCAAGTACTAAGTTTGAGCA 58.936 45.455 0.00 0.00 0.00 4.26
7813 8160 8.329203 AGTCTTATAACTTGAAGAAAGGCAAG 57.671 34.615 0.00 0.00 45.27 4.01
7857 8204 1.909302 ACTCACCACATTAGACCTGGG 59.091 52.381 0.00 0.00 0.00 4.45
7881 8228 9.349713 GGGATTTGTGGTAAATGATAAGTATGA 57.650 33.333 0.00 0.00 0.00 2.15
7951 8298 3.762407 TTACTAAGCTGTGGCAGTCAA 57.238 42.857 0.00 0.00 41.70 3.18
7981 8328 6.775629 AGTCCAACTAAGAAAATGTTAGGCAA 59.224 34.615 0.00 0.00 32.61 4.52
8206 8553 4.210724 AGCATCAAAAATTGGTCATGGG 57.789 40.909 0.00 0.00 0.00 4.00
8442 8800 0.392998 CCCATGAAGTGCGTAGGCTT 60.393 55.000 9.11 0.00 40.82 4.35
8475 8833 1.276138 ACGATGACAGCATGAGTTCCA 59.724 47.619 0.00 0.00 39.69 3.53
8547 8905 2.824936 TGCATGTTGAATCAACCGGAAT 59.175 40.909 21.75 7.19 42.96 3.01
8562 8920 3.058016 CCGTGTTTTCAAGATCTGCATGT 60.058 43.478 0.00 0.00 0.00 3.21
8803 9161 4.626042 TCCATTTTCCAACAAATTCACCG 58.374 39.130 0.00 0.00 0.00 4.94
8822 9180 1.383799 CAAACCCATCCTGCCTCCA 59.616 57.895 0.00 0.00 0.00 3.86
8882 9247 7.977853 AGTACACCTTACATACATAAAGGAACG 59.022 37.037 7.31 0.00 42.01 3.95
8902 9267 6.697019 TGTAAACTGAAACGAAGGTAGTACAC 59.303 38.462 2.06 0.00 0.00 2.90
8903 9268 6.804677 TGTAAACTGAAACGAAGGTAGTACA 58.195 36.000 2.06 0.00 0.00 2.90
8904 9269 7.436376 ACTTGTAAACTGAAACGAAGGTAGTAC 59.564 37.037 0.00 0.00 0.00 2.73
8905 9270 7.491682 ACTTGTAAACTGAAACGAAGGTAGTA 58.508 34.615 0.00 0.00 0.00 1.82
8906 9271 6.343703 ACTTGTAAACTGAAACGAAGGTAGT 58.656 36.000 0.00 0.00 0.00 2.73
8907 9272 6.073927 GGACTTGTAAACTGAAACGAAGGTAG 60.074 42.308 0.00 0.00 0.00 3.18
8908 9273 5.754890 GGACTTGTAAACTGAAACGAAGGTA 59.245 40.000 0.00 0.00 0.00 3.08
8909 9274 4.573607 GGACTTGTAAACTGAAACGAAGGT 59.426 41.667 0.00 0.00 0.00 3.50
8910 9275 4.814771 AGGACTTGTAAACTGAAACGAAGG 59.185 41.667 0.00 0.00 0.00 3.46
8911 9276 5.986004 AGGACTTGTAAACTGAAACGAAG 57.014 39.130 0.00 0.00 0.00 3.79
8912 9277 5.459762 CGTAGGACTTGTAAACTGAAACGAA 59.540 40.000 0.00 0.00 0.00 3.85
8913 9278 4.977963 CGTAGGACTTGTAAACTGAAACGA 59.022 41.667 0.00 0.00 0.00 3.85
8914 9279 4.375706 GCGTAGGACTTGTAAACTGAAACG 60.376 45.833 0.00 0.00 0.00 3.60
8915 9280 4.375706 CGCGTAGGACTTGTAAACTGAAAC 60.376 45.833 0.00 0.00 0.00 2.78
8916 9281 3.737266 CGCGTAGGACTTGTAAACTGAAA 59.263 43.478 0.00 0.00 0.00 2.69
8917 9282 3.243501 ACGCGTAGGACTTGTAAACTGAA 60.244 43.478 11.67 0.00 0.00 3.02
8918 9283 2.294233 ACGCGTAGGACTTGTAAACTGA 59.706 45.455 11.67 0.00 0.00 3.41
8919 9284 2.669364 ACGCGTAGGACTTGTAAACTG 58.331 47.619 11.67 0.00 0.00 3.16
8920 9285 4.708726 ATACGCGTAGGACTTGTAAACT 57.291 40.909 24.78 0.00 0.00 2.66
8921 9286 6.433766 AGATATACGCGTAGGACTTGTAAAC 58.566 40.000 24.78 8.64 0.00 2.01
8922 9287 6.624352 AGATATACGCGTAGGACTTGTAAA 57.376 37.500 24.78 0.00 0.00 2.01
8923 9288 6.128445 GCTAGATATACGCGTAGGACTTGTAA 60.128 42.308 24.78 0.00 0.00 2.41
8924 9289 5.349817 GCTAGATATACGCGTAGGACTTGTA 59.650 44.000 24.78 10.35 0.00 2.41
8925 9290 4.153835 GCTAGATATACGCGTAGGACTTGT 59.846 45.833 24.78 8.30 0.00 3.16
8926 9291 4.649977 GCTAGATATACGCGTAGGACTTG 58.350 47.826 24.78 20.61 0.00 3.16
8927 9292 3.370366 CGCTAGATATACGCGTAGGACTT 59.630 47.826 24.78 9.82 41.78 3.01
8928 9293 2.928757 CGCTAGATATACGCGTAGGACT 59.071 50.000 24.78 21.73 41.78 3.85
8929 9294 3.301432 CGCTAGATATACGCGTAGGAC 57.699 52.381 24.78 16.38 41.78 3.85
8936 9301 7.887996 ACCTAGATATACGCTAGATATACGC 57.112 40.000 11.30 0.00 38.03 4.42
8937 9302 8.222433 GCAACCTAGATATACGCTAGATATACG 58.778 40.741 11.30 0.00 38.03 3.06
8938 9303 8.505625 GGCAACCTAGATATACGCTAGATATAC 58.494 40.741 11.30 0.00 38.03 1.47
8939 9304 8.215736 TGGCAACCTAGATATACGCTAGATATA 58.784 37.037 11.30 0.00 38.03 0.86
8940 9305 7.061054 TGGCAACCTAGATATACGCTAGATAT 58.939 38.462 11.30 0.00 38.03 1.63
8941 9306 6.420638 TGGCAACCTAGATATACGCTAGATA 58.579 40.000 11.30 0.00 38.03 1.98
8942 9307 5.262009 TGGCAACCTAGATATACGCTAGAT 58.738 41.667 11.30 0.00 38.03 1.98
8943 9308 4.659115 TGGCAACCTAGATATACGCTAGA 58.341 43.478 11.30 0.00 38.03 2.43
8944 9309 5.386958 TTGGCAACCTAGATATACGCTAG 57.613 43.478 0.00 5.03 36.06 3.42
8945 9310 5.995565 ATTGGCAACCTAGATATACGCTA 57.004 39.130 0.00 0.00 0.00 4.26
8946 9311 4.891992 ATTGGCAACCTAGATATACGCT 57.108 40.909 0.00 0.00 0.00 5.07
8947 9312 5.468746 TCAAATTGGCAACCTAGATATACGC 59.531 40.000 0.00 0.00 0.00 4.42
8948 9313 7.387673 TGATCAAATTGGCAACCTAGATATACG 59.612 37.037 0.00 0.00 0.00 3.06
8949 9314 8.507249 GTGATCAAATTGGCAACCTAGATATAC 58.493 37.037 0.00 4.06 0.00 1.47
8950 9315 7.665559 GGTGATCAAATTGGCAACCTAGATATA 59.334 37.037 0.00 0.00 0.00 0.86
8951 9316 6.491403 GGTGATCAAATTGGCAACCTAGATAT 59.509 38.462 0.00 0.00 0.00 1.63
8952 9317 5.827797 GGTGATCAAATTGGCAACCTAGATA 59.172 40.000 0.00 0.00 0.00 1.98
8953 9318 4.646492 GGTGATCAAATTGGCAACCTAGAT 59.354 41.667 0.00 4.00 0.00 1.98
8954 9319 4.016444 GGTGATCAAATTGGCAACCTAGA 58.984 43.478 0.00 0.00 0.00 2.43
8955 9320 4.019174 AGGTGATCAAATTGGCAACCTAG 58.981 43.478 0.00 0.00 0.00 3.02
8956 9321 4.046286 AGGTGATCAAATTGGCAACCTA 57.954 40.909 0.00 0.00 0.00 3.08
8957 9322 2.893424 AGGTGATCAAATTGGCAACCT 58.107 42.857 0.00 0.00 0.00 3.50
8958 9323 3.683365 AAGGTGATCAAATTGGCAACC 57.317 42.857 0.00 0.00 0.00 3.77
9006 9371 9.958234 TTTCAGATGTTCAATTTTCAAACGATA 57.042 25.926 0.00 0.00 0.00 2.92
9007 9372 8.870160 TTTCAGATGTTCAATTTTCAAACGAT 57.130 26.923 0.00 0.00 0.00 3.73
9008 9373 8.870160 ATTTCAGATGTTCAATTTTCAAACGA 57.130 26.923 0.00 0.00 0.00 3.85
9009 9374 9.919348 AAATTTCAGATGTTCAATTTTCAAACG 57.081 25.926 0.00 0.00 0.00 3.60
9052 9417 9.209048 ACCACCTAATACAAGTCAGATATTACA 57.791 33.333 0.00 0.00 0.00 2.41
9053 9418 9.694137 GACCACCTAATACAAGTCAGATATTAC 57.306 37.037 0.00 0.00 0.00 1.89
9054 9419 9.429109 TGACCACCTAATACAAGTCAGATATTA 57.571 33.333 0.00 0.00 31.10 0.98
9055 9420 8.319057 TGACCACCTAATACAAGTCAGATATT 57.681 34.615 0.00 0.00 31.10 1.28
9056 9421 7.914427 TGACCACCTAATACAAGTCAGATAT 57.086 36.000 0.00 0.00 31.10 1.63
9057 9422 7.727578 TTGACCACCTAATACAAGTCAGATA 57.272 36.000 0.00 0.00 35.81 1.98
9058 9423 6.620877 TTGACCACCTAATACAAGTCAGAT 57.379 37.500 0.00 0.00 35.81 2.90
9059 9424 6.428083 TTTGACCACCTAATACAAGTCAGA 57.572 37.500 0.00 0.00 35.81 3.27
9060 9425 7.390440 TCAATTTGACCACCTAATACAAGTCAG 59.610 37.037 0.00 0.00 35.81 3.51
9061 9426 7.227873 TCAATTTGACCACCTAATACAAGTCA 58.772 34.615 0.00 0.00 32.71 3.41
9062 9427 7.681939 TCAATTTGACCACCTAATACAAGTC 57.318 36.000 0.00 0.00 0.00 3.01
9063 9428 7.888021 TCATCAATTTGACCACCTAATACAAGT 59.112 33.333 0.15 0.00 0.00 3.16
9064 9429 8.184192 GTCATCAATTTGACCACCTAATACAAG 58.816 37.037 0.15 0.00 40.11 3.16
9065 9430 8.050778 GTCATCAATTTGACCACCTAATACAA 57.949 34.615 0.15 0.00 40.11 2.41
9066 9431 7.624360 GTCATCAATTTGACCACCTAATACA 57.376 36.000 0.15 0.00 40.11 2.29
9077 9442 5.696724 CGTATCCCTAGGTCATCAATTTGAC 59.303 44.000 8.29 2.20 44.27 3.18
9078 9443 5.365605 ACGTATCCCTAGGTCATCAATTTGA 59.634 40.000 8.29 0.75 0.00 2.69
9079 9444 5.466728 CACGTATCCCTAGGTCATCAATTTG 59.533 44.000 8.29 0.00 0.00 2.32
9080 9445 5.611374 CACGTATCCCTAGGTCATCAATTT 58.389 41.667 8.29 0.00 0.00 1.82
9081 9446 4.503296 GCACGTATCCCTAGGTCATCAATT 60.503 45.833 8.29 0.00 0.00 2.32
9082 9447 3.006967 GCACGTATCCCTAGGTCATCAAT 59.993 47.826 8.29 0.00 0.00 2.57
9083 9448 2.364324 GCACGTATCCCTAGGTCATCAA 59.636 50.000 8.29 0.00 0.00 2.57
9084 9449 1.961394 GCACGTATCCCTAGGTCATCA 59.039 52.381 8.29 0.00 0.00 3.07
9085 9450 1.961394 TGCACGTATCCCTAGGTCATC 59.039 52.381 8.29 0.00 0.00 2.92
9086 9451 1.687123 GTGCACGTATCCCTAGGTCAT 59.313 52.381 8.29 1.72 0.00 3.06
9087 9452 1.108776 GTGCACGTATCCCTAGGTCA 58.891 55.000 8.29 0.00 0.00 4.02
9088 9453 0.030369 CGTGCACGTATCCCTAGGTC 59.970 60.000 30.50 0.00 34.11 3.85
9089 9454 2.012902 GCGTGCACGTATCCCTAGGT 62.013 60.000 36.80 0.00 42.22 3.08
9090 9455 1.299926 GCGTGCACGTATCCCTAGG 60.300 63.158 36.80 0.06 42.22 3.02
9091 9456 1.299926 GGCGTGCACGTATCCCTAG 60.300 63.158 36.80 9.58 42.22 3.02
9092 9457 2.809706 GGCGTGCACGTATCCCTA 59.190 61.111 36.80 0.00 42.22 3.53
9093 9458 4.508128 CGGCGTGCACGTATCCCT 62.508 66.667 36.80 0.00 42.22 4.20
9094 9459 4.807039 ACGGCGTGCACGTATCCC 62.807 66.667 36.80 27.83 43.60 3.85
9095 9460 2.870667 TACACGGCGTGCACGTATCC 62.871 60.000 37.21 28.17 43.58 2.59
9096 9461 1.072116 TTACACGGCGTGCACGTATC 61.072 55.000 37.21 25.13 43.58 2.24
9097 9462 0.666880 TTTACACGGCGTGCACGTAT 60.667 50.000 37.21 21.51 43.58 3.06
9098 9463 1.299697 TTTACACGGCGTGCACGTA 60.300 52.632 37.21 20.60 43.58 3.57
9099 9464 2.585524 TTTACACGGCGTGCACGT 60.586 55.556 37.21 21.68 46.82 4.49
9100 9465 2.127906 GTTTACACGGCGTGCACG 60.128 61.111 37.21 34.01 36.98 5.34
9101 9466 1.083015 CAGTTTACACGGCGTGCAC 60.083 57.895 37.21 29.06 36.98 4.57
9102 9467 0.810426 TTCAGTTTACACGGCGTGCA 60.810 50.000 37.21 24.91 36.98 4.57
9103 9468 0.305313 TTTCAGTTTACACGGCGTGC 59.695 50.000 37.21 21.99 36.98 5.34
9104 9469 1.862201 TCTTTCAGTTTACACGGCGTG 59.138 47.619 35.89 35.89 39.75 5.34
9105 9470 2.132762 CTCTTTCAGTTTACACGGCGT 58.867 47.619 6.77 6.77 0.00 5.68
9106 9471 2.400399 TCTCTTTCAGTTTACACGGCG 58.600 47.619 4.80 4.80 0.00 6.46
9107 9472 2.737252 CCTCTCTTTCAGTTTACACGGC 59.263 50.000 0.00 0.00 0.00 5.68
9108 9473 3.006537 TCCCTCTCTTTCAGTTTACACGG 59.993 47.826 0.00 0.00 0.00 4.94
9109 9474 4.238514 CTCCCTCTCTTTCAGTTTACACG 58.761 47.826 0.00 0.00 0.00 4.49
9110 9475 5.216614 ACTCCCTCTCTTTCAGTTTACAC 57.783 43.478 0.00 0.00 0.00 2.90
9111 9476 7.554959 AATACTCCCTCTCTTTCAGTTTACA 57.445 36.000 0.00 0.00 0.00 2.41
9115 9480 9.674068 GAAAATAATACTCCCTCTCTTTCAGTT 57.326 33.333 0.00 0.00 0.00 3.16
9116 9481 7.982354 CGAAAATAATACTCCCTCTCTTTCAGT 59.018 37.037 0.00 0.00 0.00 3.41
9117 9482 7.439655 CCGAAAATAATACTCCCTCTCTTTCAG 59.560 40.741 0.00 0.00 0.00 3.02
9118 9483 7.272978 CCGAAAATAATACTCCCTCTCTTTCA 58.727 38.462 0.00 0.00 0.00 2.69
9119 9484 6.203145 GCCGAAAATAATACTCCCTCTCTTTC 59.797 42.308 0.00 0.00 0.00 2.62
9120 9485 6.056236 GCCGAAAATAATACTCCCTCTCTTT 58.944 40.000 0.00 0.00 0.00 2.52
9121 9486 5.130477 TGCCGAAAATAATACTCCCTCTCTT 59.870 40.000 0.00 0.00 0.00 2.85
9122 9487 4.654262 TGCCGAAAATAATACTCCCTCTCT 59.346 41.667 0.00 0.00 0.00 3.10
9123 9488 4.750598 GTGCCGAAAATAATACTCCCTCTC 59.249 45.833 0.00 0.00 0.00 3.20
9124 9489 4.704965 GTGCCGAAAATAATACTCCCTCT 58.295 43.478 0.00 0.00 0.00 3.69
9125 9490 3.493503 CGTGCCGAAAATAATACTCCCTC 59.506 47.826 0.00 0.00 0.00 4.30
9126 9491 3.463944 CGTGCCGAAAATAATACTCCCT 58.536 45.455 0.00 0.00 0.00 4.20
9127 9492 2.546789 CCGTGCCGAAAATAATACTCCC 59.453 50.000 0.00 0.00 0.00 4.30
9128 9493 3.001939 CACCGTGCCGAAAATAATACTCC 59.998 47.826 0.00 0.00 0.00 3.85
9129 9494 3.866910 TCACCGTGCCGAAAATAATACTC 59.133 43.478 0.00 0.00 0.00 2.59
9130 9495 3.864243 TCACCGTGCCGAAAATAATACT 58.136 40.909 0.00 0.00 0.00 2.12
9147 9512 7.661437 TGTCTATAATTATGTGCCTTGATCACC 59.339 37.037 8.28 0.00 33.71 4.02
9152 9517 8.210265 TCACATGTCTATAATTATGTGCCTTGA 58.790 33.333 8.28 0.87 46.07 3.02
9162 9527 9.524106 AATTTCGTCGTCACATGTCTATAATTA 57.476 29.630 0.00 0.00 0.00 1.40
9179 9544 6.869421 AATTTGCCAAAGATAATTTCGTCG 57.131 33.333 0.00 0.00 0.00 5.12
9190 9555 5.983540 ACTAACCAACAAATTTGCCAAAGA 58.016 33.333 18.12 0.00 0.00 2.52
9192 9557 5.582665 GTGACTAACCAACAAATTTGCCAAA 59.417 36.000 18.12 0.00 0.00 3.28
9235 9600 8.424133 GGGATTGCATGTATCTTTTATTTTCCT 58.576 33.333 9.02 0.00 0.00 3.36
9245 9610 7.729116 CCTAAAAATGGGATTGCATGTATCTT 58.271 34.615 9.02 0.26 0.00 2.40
9259 9624 9.513906 AATTTTGTTGTTATCCCTAAAAATGGG 57.486 29.630 0.00 0.00 45.90 4.00
9307 9741 9.400208 TCCATCCATTCCTTTATATAAGGTGTA 57.600 33.333 4.13 3.09 38.55 2.90
9308 9742 8.287904 TCCATCCATTCCTTTATATAAGGTGT 57.712 34.615 4.13 2.81 38.55 4.16
9366 9800 7.042335 CAGTTCTCATATACTCCTCCGTTTTT 58.958 38.462 0.00 0.00 0.00 1.94
9367 9801 6.154706 ACAGTTCTCATATACTCCTCCGTTTT 59.845 38.462 0.00 0.00 0.00 2.43
9368 9802 5.657302 ACAGTTCTCATATACTCCTCCGTTT 59.343 40.000 0.00 0.00 0.00 3.60
9369 9803 5.067936 CACAGTTCTCATATACTCCTCCGTT 59.932 44.000 0.00 0.00 0.00 4.44
9370 9804 4.580995 CACAGTTCTCATATACTCCTCCGT 59.419 45.833 0.00 0.00 0.00 4.69
9371 9805 4.580995 ACACAGTTCTCATATACTCCTCCG 59.419 45.833 0.00 0.00 0.00 4.63
9372 9806 6.773685 AGTACACAGTTCTCATATACTCCTCC 59.226 42.308 0.00 0.00 0.00 4.30
9373 9807 7.811117 AGTACACAGTTCTCATATACTCCTC 57.189 40.000 0.00 0.00 0.00 3.71
9374 9808 7.811117 GAGTACACAGTTCTCATATACTCCT 57.189 40.000 0.00 0.00 33.85 3.69
9375 9809 6.972722 GGAGTACACAGTTCTCATATACTCC 58.027 44.000 10.81 10.81 45.89 3.85
9376 9810 6.546403 TGGGAGTACACAGTTCTCATATACTC 59.454 42.308 0.00 0.00 37.43 2.59
9377 9811 6.432581 TGGGAGTACACAGTTCTCATATACT 58.567 40.000 0.00 0.00 32.78 2.12
9378 9812 6.710597 TGGGAGTACACAGTTCTCATATAC 57.289 41.667 0.00 0.00 32.78 1.47
9379 9813 7.563556 TCAATGGGAGTACACAGTTCTCATATA 59.436 37.037 0.00 0.00 31.01 0.86
9380 9814 6.384015 TCAATGGGAGTACACAGTTCTCATAT 59.616 38.462 0.00 0.00 31.01 1.78
9381 9815 5.719563 TCAATGGGAGTACACAGTTCTCATA 59.280 40.000 0.00 0.00 31.01 2.15
9382 9816 4.532126 TCAATGGGAGTACACAGTTCTCAT 59.468 41.667 0.00 0.00 33.58 2.90
9442 9876 6.851609 AGAAGCATATAGTCGATCTGATCAC 58.148 40.000 17.19 13.32 0.00 3.06
9475 9909 4.561606 CGCGTTGTAGCCTATATAATGTCC 59.438 45.833 0.00 0.00 0.00 4.02
9546 9981 3.218453 TCCTCTCCTAGATGAAGAAGCG 58.782 50.000 0.00 0.00 0.00 4.68
9584 10029 4.689345 CCAAAGACGAAAACCTACGATTCT 59.311 41.667 0.00 0.00 0.00 2.40
9600 10045 8.182227 GCATTTGTCCTAGTAAATACCAAAGAC 58.818 37.037 0.00 0.00 0.00 3.01
9601 10046 7.338449 GGCATTTGTCCTAGTAAATACCAAAGA 59.662 37.037 7.95 0.00 32.41 2.52
9615 10060 0.036164 ACGCACTGGCATTTGTCCTA 59.964 50.000 0.00 0.00 41.24 2.94
9616 10061 0.823356 AACGCACTGGCATTTGTCCT 60.823 50.000 0.00 0.00 41.24 3.85
9617 10062 0.664166 CAACGCACTGGCATTTGTCC 60.664 55.000 0.00 0.00 41.24 4.02
9618 10063 1.277495 GCAACGCACTGGCATTTGTC 61.277 55.000 0.00 0.00 41.24 3.18
9619 10064 1.300080 GCAACGCACTGGCATTTGT 60.300 52.632 0.00 0.00 41.24 2.83
9620 10065 0.668096 ATGCAACGCACTGGCATTTG 60.668 50.000 0.00 0.00 45.34 2.32
9621 10066 1.667151 ATGCAACGCACTGGCATTT 59.333 47.368 0.00 0.00 45.34 2.32
9622 10067 3.368822 ATGCAACGCACTGGCATT 58.631 50.000 0.00 0.00 45.34 3.56
9624 10069 3.725459 CGATGCAACGCACTGGCA 61.725 61.111 2.61 0.00 43.04 4.92
9625 10070 4.465512 CCGATGCAACGCACTGGC 62.466 66.667 11.32 0.00 43.04 4.85
9626 10071 2.741985 TCCGATGCAACGCACTGG 60.742 61.111 11.32 0.00 43.04 4.00
9627 10072 2.476051 GTCCGATGCAACGCACTG 59.524 61.111 11.32 0.00 43.04 3.66
9628 10073 3.112075 CGTCCGATGCAACGCACT 61.112 61.111 11.32 0.00 43.04 4.40
9629 10074 2.165362 TTTCGTCCGATGCAACGCAC 62.165 55.000 11.32 5.48 43.04 5.34
9630 10075 1.499688 TTTTCGTCCGATGCAACGCA 61.500 50.000 11.32 0.00 44.86 5.24
9631 10076 0.384974 TTTTTCGTCCGATGCAACGC 60.385 50.000 11.32 0.00 38.72 4.84
9632 10077 3.738482 TTTTTCGTCCGATGCAACG 57.262 47.368 9.71 9.71 40.17 4.10
9656 10101 1.948834 TGTCACATGAAGCAGGTTGTG 59.051 47.619 0.00 0.00 40.58 3.33
9657 10102 2.346766 TGTCACATGAAGCAGGTTGT 57.653 45.000 0.00 0.00 0.00 3.32
9658 10103 3.928727 AATGTCACATGAAGCAGGTTG 57.071 42.857 0.00 0.00 0.00 3.77
9659 10104 4.142315 GCATAATGTCACATGAAGCAGGTT 60.142 41.667 0.00 0.00 0.00 3.50
9660 10105 3.379372 GCATAATGTCACATGAAGCAGGT 59.621 43.478 0.00 0.00 0.00 4.00
9661 10106 3.379057 TGCATAATGTCACATGAAGCAGG 59.621 43.478 0.51 0.00 0.00 4.85
9662 10107 4.348656 GTGCATAATGTCACATGAAGCAG 58.651 43.478 5.22 0.00 33.63 4.24
9663 10108 3.129113 GGTGCATAATGTCACATGAAGCA 59.871 43.478 0.51 0.51 35.04 3.91
9664 10109 3.129113 TGGTGCATAATGTCACATGAAGC 59.871 43.478 0.00 0.00 35.04 3.86
9665 10110 4.968812 TGGTGCATAATGTCACATGAAG 57.031 40.909 0.00 0.00 35.04 3.02
9666 10111 5.195185 AGATGGTGCATAATGTCACATGAA 58.805 37.500 0.00 0.00 35.04 2.57
9667 10112 4.784177 AGATGGTGCATAATGTCACATGA 58.216 39.130 0.00 0.00 35.04 3.07
9668 10113 5.509716 AAGATGGTGCATAATGTCACATG 57.490 39.130 0.00 0.00 35.04 3.21
9669 10114 6.534475 AAAAGATGGTGCATAATGTCACAT 57.466 33.333 0.00 0.00 35.04 3.21
9670 10115 5.981088 AAAAGATGGTGCATAATGTCACA 57.019 34.783 0.00 0.00 35.04 3.58
9705 10150 8.899771 CCCTTAACCTTATCATTGACGTTTATT 58.100 33.333 0.00 0.00 0.00 1.40
9706 10151 8.050930 ACCCTTAACCTTATCATTGACGTTTAT 58.949 33.333 0.00 0.00 0.00 1.40
9707 10152 7.396418 ACCCTTAACCTTATCATTGACGTTTA 58.604 34.615 0.00 0.00 0.00 2.01
9708 10153 6.243148 ACCCTTAACCTTATCATTGACGTTT 58.757 36.000 0.00 0.00 0.00 3.60
9709 10154 5.812286 ACCCTTAACCTTATCATTGACGTT 58.188 37.500 0.00 0.00 0.00 3.99
9710 10155 5.431179 ACCCTTAACCTTATCATTGACGT 57.569 39.130 0.00 0.00 0.00 4.34
9711 10156 7.852971 TTAACCCTTAACCTTATCATTGACG 57.147 36.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.