Multiple sequence alignment - TraesCS4B01G160300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G160300 chr4B 100.000 5028 0 0 1 5028 312789294 312784267 0.000000e+00 9286.0
1 TraesCS4B01G160300 chr4B 98.841 690 8 0 4339 5028 238169295 238169984 0.000000e+00 1230.0
2 TraesCS4B01G160300 chr4B 82.051 273 42 6 3843 4111 40785641 40785910 5.060000e-55 226.0
3 TraesCS4B01G160300 chr4D 96.028 3046 84 16 823 3842 154793750 154796784 0.000000e+00 4920.0
4 TraesCS4B01G160300 chr4D 85.374 588 53 12 1 564 154793141 154793719 3.370000e-161 579.0
5 TraesCS4B01G160300 chr4D 96.903 226 7 0 4109 4334 154796782 154797007 3.670000e-101 379.0
6 TraesCS4B01G160300 chr4D 85.597 243 33 2 577 817 437030163 437030405 2.320000e-63 254.0
7 TraesCS4B01G160300 chr4D 82.540 126 19 3 344 468 69118625 69118502 1.910000e-19 108.0
8 TraesCS4B01G160300 chr4A 93.710 1860 89 13 1632 3466 331629716 331631572 0.000000e+00 2761.0
9 TraesCS4B01G160300 chr4A 98.415 694 10 1 4335 5028 36323512 36322820 0.000000e+00 1219.0
10 TraesCS4B01G160300 chr4A 93.397 833 31 7 820 1647 331628727 331629540 0.000000e+00 1212.0
11 TraesCS4B01G160300 chr4A 94.879 371 11 2 3472 3842 331631699 331632061 1.570000e-159 573.0
12 TraesCS4B01G160300 chr4A 95.671 231 10 0 4109 4339 331632059 331632289 6.150000e-99 372.0
13 TraesCS4B01G160300 chr4A 86.076 237 29 3 585 818 624692205 624691970 8.360000e-63 252.0
14 TraesCS4B01G160300 chr4A 78.082 219 27 10 258 457 563087571 563087787 8.840000e-23 119.0
15 TraesCS4B01G160300 chr7B 98.986 690 7 0 4339 5028 424542324 424541635 0.000000e+00 1236.0
16 TraesCS4B01G160300 chr7A 98.986 690 7 0 4339 5028 473484341 473485030 0.000000e+00 1236.0
17 TraesCS4B01G160300 chr7A 82.443 262 40 4 3855 4112 510382259 510382000 1.820000e-54 224.0
18 TraesCS4B01G160300 chr7A 100.000 36 0 0 3432 3467 117087385 117087420 3.250000e-07 67.6
19 TraesCS4B01G160300 chr5B 98.847 694 7 1 4336 5028 311961643 311960950 0.000000e+00 1236.0
20 TraesCS4B01G160300 chr5B 86.940 268 33 2 3846 4111 711156076 711155809 2.940000e-77 300.0
21 TraesCS4B01G160300 chr5B 86.000 200 25 3 3915 4112 114930125 114929927 1.420000e-50 211.0
22 TraesCS4B01G160300 chr5B 81.481 108 16 4 355 461 65482784 65482680 8.970000e-13 86.1
23 TraesCS4B01G160300 chrUn 98.842 691 8 0 4338 5028 437387883 437387193 0.000000e+00 1232.0
24 TraesCS4B01G160300 chr3A 98.841 690 8 0 4339 5028 444446559 444445870 0.000000e+00 1230.0
25 TraesCS4B01G160300 chr3A 86.325 234 30 2 585 817 465718492 465718260 2.320000e-63 254.0
26 TraesCS4B01G160300 chr3A 85.537 242 29 4 3843 4079 750495670 750495430 1.080000e-61 248.0
27 TraesCS4B01G160300 chr3A 86.957 69 1 5 3430 3497 693198224 693198163 2.510000e-08 71.3
28 TraesCS4B01G160300 chr1A 98.841 690 8 0 4339 5028 27319263 27319952 0.000000e+00 1230.0
29 TraesCS4B01G160300 chr1A 80.672 119 17 2 350 468 539602695 539602583 2.490000e-13 87.9
30 TraesCS4B01G160300 chr1A 87.931 58 1 1 3431 3488 335033491 335033542 4.200000e-06 63.9
31 TraesCS4B01G160300 chr1A 94.872 39 1 1 3428 3466 153340523 153340560 5.440000e-05 60.2
32 TraesCS4B01G160300 chr3B 98.696 690 9 0 4339 5028 472654309 472654998 0.000000e+00 1225.0
33 TraesCS4B01G160300 chr3B 84.906 265 36 4 3843 4105 617435493 617435755 1.070000e-66 265.0
34 TraesCS4B01G160300 chr3B 86.441 236 28 4 585 817 759027989 759028223 6.460000e-64 255.0
35 TraesCS4B01G160300 chr3B 83.654 104 13 4 355 457 479919294 479919194 1.490000e-15 95.3
36 TraesCS4B01G160300 chr1B 87.823 271 29 3 3843 4111 217292064 217291796 1.050000e-81 315.0
37 TraesCS4B01G160300 chr1B 81.787 291 37 8 3843 4119 62546294 62546582 3.920000e-56 230.0
38 TraesCS4B01G160300 chr1B 89.655 58 0 1 3431 3488 345325194 345325245 9.030000e-08 69.4
39 TraesCS4B01G160300 chr1B 97.297 37 1 0 3431 3467 631859370 631859406 4.200000e-06 63.9
40 TraesCS4B01G160300 chr6B 85.075 268 34 4 3848 4111 418070430 418070165 8.300000e-68 268.0
41 TraesCS4B01G160300 chr6B 87.234 235 29 1 584 817 66750485 66750719 2.980000e-67 267.0
42 TraesCS4B01G160300 chr6B 84.758 269 38 3 3843 4111 569033919 569033654 2.980000e-67 267.0
43 TraesCS4B01G160300 chr2B 87.137 241 26 5 581 817 458496723 458496484 8.300000e-68 268.0
44 TraesCS4B01G160300 chr2B 85.774 239 30 4 582 817 160951591 160951828 3.010000e-62 250.0
45 TraesCS4B01G160300 chr3D 87.234 235 28 2 585 817 145199641 145199407 2.980000e-67 267.0
46 TraesCS4B01G160300 chr3D 86.885 61 2 1 3428 3488 576794247 576794301 4.200000e-06 63.9
47 TraesCS4B01G160300 chr5A 85.714 238 32 2 582 817 632012431 632012668 3.010000e-62 250.0
48 TraesCS4B01G160300 chr7D 84.733 131 18 2 338 468 100255111 100255239 4.090000e-26 130.0
49 TraesCS4B01G160300 chr7D 100.000 36 0 0 3432 3467 112131325 112131360 3.250000e-07 67.6
50 TraesCS4B01G160300 chr2A 93.750 80 5 0 3851 3930 758757136 758757215 2.460000e-23 121.0
51 TraesCS4B01G160300 chr1D 93.617 47 1 2 3429 3474 481618372 481618327 9.030000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G160300 chr4B 312784267 312789294 5027 True 9286.000000 9286 100.000000 1 5028 1 chr4B.!!$R1 5027
1 TraesCS4B01G160300 chr4B 238169295 238169984 689 False 1230.000000 1230 98.841000 4339 5028 1 chr4B.!!$F2 689
2 TraesCS4B01G160300 chr4D 154793141 154797007 3866 False 1959.333333 4920 92.768333 1 4334 3 chr4D.!!$F2 4333
3 TraesCS4B01G160300 chr4A 331628727 331632289 3562 False 1229.500000 2761 94.414250 820 4339 4 chr4A.!!$F2 3519
4 TraesCS4B01G160300 chr4A 36322820 36323512 692 True 1219.000000 1219 98.415000 4335 5028 1 chr4A.!!$R1 693
5 TraesCS4B01G160300 chr7B 424541635 424542324 689 True 1236.000000 1236 98.986000 4339 5028 1 chr7B.!!$R1 689
6 TraesCS4B01G160300 chr7A 473484341 473485030 689 False 1236.000000 1236 98.986000 4339 5028 1 chr7A.!!$F2 689
7 TraesCS4B01G160300 chr5B 311960950 311961643 693 True 1236.000000 1236 98.847000 4336 5028 1 chr5B.!!$R3 692
8 TraesCS4B01G160300 chrUn 437387193 437387883 690 True 1232.000000 1232 98.842000 4338 5028 1 chrUn.!!$R1 690
9 TraesCS4B01G160300 chr3A 444445870 444446559 689 True 1230.000000 1230 98.841000 4339 5028 1 chr3A.!!$R1 689
10 TraesCS4B01G160300 chr1A 27319263 27319952 689 False 1230.000000 1230 98.841000 4339 5028 1 chr1A.!!$F1 689
11 TraesCS4B01G160300 chr3B 472654309 472654998 689 False 1225.000000 1225 98.696000 4339 5028 1 chr3B.!!$F1 689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
465 489 0.175989 GAACTAGGGTTCCAGGCGAG 59.824 60.0 0.00 0.0 44.24 5.03 F
1407 1435 0.179145 GCAATGCATCTGCGAGCTTT 60.179 50.0 14.98 0.0 45.83 3.51 F
2193 2415 0.615331 GACAGTGCAAGATGAGGGGA 59.385 55.0 0.00 0.0 0.00 4.81 F
3877 4251 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.0 5.23 3.9 44.66 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1460 1488 0.810648 GCAATCGGCATGAACAGGAA 59.189 50.000 0.00 0.0 43.97 3.36 R
2551 2773 0.590195 CAAGGCAATAGGAGCATCGC 59.410 55.000 0.00 0.0 34.37 4.58 R
3858 4232 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.0 46.06 4.30 R
4952 5326 1.065636 CAAGCCTCTCAGATGCCTTGA 60.066 52.381 0.00 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.260434 GCCGACAACCTGCGACTA 59.740 61.111 0.00 0.00 0.00 2.59
22 23 2.092882 GCCGACAACCTGCGACTAC 61.093 63.158 0.00 0.00 0.00 2.73
52 53 4.373116 GCTCCGTTGCGTCCCTCA 62.373 66.667 0.00 0.00 0.00 3.86
54 55 3.934391 CTCCGTTGCGTCCCTCACC 62.934 68.421 0.00 0.00 0.00 4.02
61 62 4.760047 CGTCCCTCACCCTTGCCG 62.760 72.222 0.00 0.00 0.00 5.69
94 96 1.447643 GAGTGGTGTGTGCCTCTGT 59.552 57.895 0.00 0.00 33.06 3.41
104 108 4.329545 GCCTCTGTTCGGGGTGCA 62.330 66.667 0.00 0.00 0.00 4.57
137 141 4.778143 CACGGGCACTAGCACCCC 62.778 72.222 13.73 8.62 42.77 4.95
142 146 3.775654 GCACTAGCACCCCTCGCT 61.776 66.667 0.00 0.00 43.62 4.93
145 149 4.537433 CTAGCACCCCTCGCTGGC 62.537 72.222 0.00 0.00 40.73 4.85
211 216 3.515286 CAGATTGCGCTGCCCCAG 61.515 66.667 9.73 0.00 34.12 4.45
250 256 2.600769 AGGGTCAGCTCCGACGTT 60.601 61.111 0.00 0.00 36.73 3.99
255 261 4.753877 CAGCTCCGACGTTCGCGA 62.754 66.667 3.71 3.71 44.71 5.87
317 323 1.268992 TACCCCGATGTCCACCTTGG 61.269 60.000 0.00 0.00 39.43 3.61
384 408 2.094659 CGGAGCTCGACATTGCGTT 61.095 57.895 7.83 0.00 42.43 4.84
396 420 1.024271 ATTGCGTTGGATTGGATCGG 58.976 50.000 0.00 0.00 0.00 4.18
404 428 3.475566 TGGATTGGATCGGAATCAGAC 57.524 47.619 14.68 2.85 32.34 3.51
408 432 2.159179 TGGATCGGAATCAGACAGGA 57.841 50.000 0.00 0.00 33.21 3.86
416 440 3.430098 CGGAATCAGACAGGAAAGAGGAG 60.430 52.174 0.00 0.00 0.00 3.69
421 445 3.012274 TCAGACAGGAAAGAGGAGAGGAT 59.988 47.826 0.00 0.00 0.00 3.24
427 451 1.068434 GAAAGAGGAGAGGATGGAGCG 59.932 57.143 0.00 0.00 0.00 5.03
428 452 0.260230 AAGAGGAGAGGATGGAGCGA 59.740 55.000 0.00 0.00 0.00 4.93
463 487 4.934989 GAACTAGGGTTCCAGGCG 57.065 61.111 0.00 0.00 44.24 5.52
464 488 2.283824 GAACTAGGGTTCCAGGCGA 58.716 57.895 0.00 0.00 44.24 5.54
465 489 0.175989 GAACTAGGGTTCCAGGCGAG 59.824 60.000 0.00 0.00 44.24 5.03
466 490 1.265454 AACTAGGGTTCCAGGCGAGG 61.265 60.000 0.00 0.00 0.00 4.63
467 491 1.381327 CTAGGGTTCCAGGCGAGGA 60.381 63.158 0.00 0.00 35.41 3.71
472 496 1.064979 GGGTTCCAGGCGAGGATTTTA 60.065 52.381 2.56 0.00 37.56 1.52
476 500 4.159693 GGTTCCAGGCGAGGATTTTATTTT 59.840 41.667 2.56 0.00 37.56 1.82
513 537 2.091994 AGGAGCTGGATTGGGATCTTTG 60.092 50.000 0.00 0.00 32.66 2.77
521 546 3.448660 GGATTGGGATCTTTGTGGGAAAG 59.551 47.826 0.00 0.00 32.66 2.62
532 557 2.114411 GGGAAAGCCGTGGGTCAA 59.886 61.111 0.00 0.00 33.83 3.18
533 558 1.304134 GGGAAAGCCGTGGGTCAAT 60.304 57.895 0.00 0.00 33.83 2.57
534 559 1.595093 GGGAAAGCCGTGGGTCAATG 61.595 60.000 0.00 0.00 33.83 2.82
535 560 1.595093 GGAAAGCCGTGGGTCAATGG 61.595 60.000 0.00 0.00 0.00 3.16
536 561 0.893727 GAAAGCCGTGGGTCAATGGT 60.894 55.000 0.00 0.00 0.00 3.55
539 564 2.361104 CCGTGGGTCAATGGTGGG 60.361 66.667 0.00 0.00 0.00 4.61
540 565 3.061848 CGTGGGTCAATGGTGGGC 61.062 66.667 0.00 0.00 0.00 5.36
541 566 2.679996 GTGGGTCAATGGTGGGCC 60.680 66.667 0.00 0.00 0.00 5.80
542 567 4.358841 TGGGTCAATGGTGGGCCG 62.359 66.667 0.00 0.00 37.67 6.13
544 569 4.041762 GGTCAATGGTGGGCCGGA 62.042 66.667 5.05 0.00 37.67 5.14
564 589 1.831736 ACTGTTAGCAAGCCGTCCTAT 59.168 47.619 0.00 0.00 0.00 2.57
565 590 3.028850 ACTGTTAGCAAGCCGTCCTATA 58.971 45.455 0.00 0.00 0.00 1.31
566 591 3.641906 ACTGTTAGCAAGCCGTCCTATAT 59.358 43.478 0.00 0.00 0.00 0.86
567 592 4.238514 CTGTTAGCAAGCCGTCCTATATC 58.761 47.826 0.00 0.00 0.00 1.63
568 593 3.895656 TGTTAGCAAGCCGTCCTATATCT 59.104 43.478 0.00 0.00 0.00 1.98
570 595 5.048224 TGTTAGCAAGCCGTCCTATATCTAC 60.048 44.000 0.00 0.00 0.00 2.59
571 596 2.826725 AGCAAGCCGTCCTATATCTACC 59.173 50.000 0.00 0.00 0.00 3.18
572 597 2.094130 GCAAGCCGTCCTATATCTACCC 60.094 54.545 0.00 0.00 0.00 3.69
573 598 3.432378 CAAGCCGTCCTATATCTACCCT 58.568 50.000 0.00 0.00 0.00 4.34
574 599 3.369242 AGCCGTCCTATATCTACCCTC 57.631 52.381 0.00 0.00 0.00 4.30
575 600 2.648304 AGCCGTCCTATATCTACCCTCA 59.352 50.000 0.00 0.00 0.00 3.86
576 601 3.075582 AGCCGTCCTATATCTACCCTCAA 59.924 47.826 0.00 0.00 0.00 3.02
577 602 4.024670 GCCGTCCTATATCTACCCTCAAT 58.975 47.826 0.00 0.00 0.00 2.57
578 603 4.466726 GCCGTCCTATATCTACCCTCAATT 59.533 45.833 0.00 0.00 0.00 2.32
579 604 5.046520 GCCGTCCTATATCTACCCTCAATTT 60.047 44.000 0.00 0.00 0.00 1.82
580 605 6.154021 GCCGTCCTATATCTACCCTCAATTTA 59.846 42.308 0.00 0.00 0.00 1.40
581 606 7.630944 GCCGTCCTATATCTACCCTCAATTTAG 60.631 44.444 0.00 0.00 0.00 1.85
584 609 7.400627 GTCCTATATCTACCCTCAATTTAGGCT 59.599 40.741 0.00 0.00 35.09 4.58
585 610 8.630091 TCCTATATCTACCCTCAATTTAGGCTA 58.370 37.037 0.00 0.00 35.09 3.93
586 611 9.268282 CCTATATCTACCCTCAATTTAGGCTAA 57.732 37.037 2.04 2.04 35.09 3.09
588 613 5.888982 TCTACCCTCAATTTAGGCTAAGG 57.111 43.478 7.09 6.74 35.09 2.69
590 615 2.091830 ACCCTCAATTTAGGCTAAGGGC 60.092 50.000 22.68 0.00 46.15 5.19
591 616 2.091885 CCCTCAATTTAGGCTAAGGGCA 60.092 50.000 13.88 0.00 44.01 5.36
593 618 4.202567 CCCTCAATTTAGGCTAAGGGCATA 60.203 45.833 13.88 0.00 44.01 3.14
594 619 5.517299 CCCTCAATTTAGGCTAAGGGCATAT 60.517 44.000 13.88 0.00 44.01 1.78
595 620 6.297010 CCCTCAATTTAGGCTAAGGGCATATA 60.297 42.308 13.88 0.00 44.01 0.86
596 621 7.349598 CCTCAATTTAGGCTAAGGGCATATAT 58.650 38.462 7.09 0.00 44.01 0.86
597 622 8.494433 CCTCAATTTAGGCTAAGGGCATATATA 58.506 37.037 7.09 0.00 44.01 0.86
598 623 9.905713 CTCAATTTAGGCTAAGGGCATATATAA 57.094 33.333 7.09 0.00 44.01 0.98
601 626 9.646522 AATTTAGGCTAAGGGCATATATAATGG 57.353 33.333 7.09 0.00 44.01 3.16
602 627 7.765149 TTAGGCTAAGGGCATATATAATGGT 57.235 36.000 2.04 0.00 44.01 3.55
603 628 6.006275 AGGCTAAGGGCATATATAATGGTG 57.994 41.667 0.00 0.00 44.01 4.17
604 629 5.492524 AGGCTAAGGGCATATATAATGGTGT 59.507 40.000 0.00 0.00 44.01 4.16
605 630 6.011628 AGGCTAAGGGCATATATAATGGTGTT 60.012 38.462 0.00 0.00 44.01 3.32
606 631 7.183839 AGGCTAAGGGCATATATAATGGTGTTA 59.816 37.037 0.00 0.00 44.01 2.41
607 632 7.998964 GGCTAAGGGCATATATAATGGTGTTAT 59.001 37.037 0.00 0.00 44.01 1.89
608 633 9.408648 GCTAAGGGCATATATAATGGTGTTATT 57.591 33.333 0.00 0.00 41.35 1.40
613 638 9.561069 GGGCATATATAATGGTGTTATTCTAGG 57.439 37.037 0.00 0.00 0.00 3.02
619 644 3.906720 TGGTGTTATTCTAGGAGTGCC 57.093 47.619 0.00 0.00 0.00 5.01
620 645 3.178046 TGGTGTTATTCTAGGAGTGCCA 58.822 45.455 0.00 0.00 36.29 4.92
621 646 3.780294 TGGTGTTATTCTAGGAGTGCCAT 59.220 43.478 0.00 0.00 36.29 4.40
622 647 4.130118 GGTGTTATTCTAGGAGTGCCATG 58.870 47.826 0.00 0.00 36.29 3.66
623 648 4.384208 GGTGTTATTCTAGGAGTGCCATGT 60.384 45.833 0.00 0.00 36.29 3.21
624 649 5.163343 GGTGTTATTCTAGGAGTGCCATGTA 60.163 44.000 0.00 0.00 36.29 2.29
625 650 5.986135 GTGTTATTCTAGGAGTGCCATGTAG 59.014 44.000 0.00 0.00 36.29 2.74
626 651 5.070446 TGTTATTCTAGGAGTGCCATGTAGG 59.930 44.000 0.00 0.00 41.84 3.18
627 652 3.398318 TTCTAGGAGTGCCATGTAGGA 57.602 47.619 0.00 0.00 41.22 2.94
628 653 3.619900 TCTAGGAGTGCCATGTAGGAT 57.380 47.619 0.00 0.00 41.22 3.24
629 654 4.741928 TCTAGGAGTGCCATGTAGGATA 57.258 45.455 0.00 0.00 41.22 2.59
630 655 5.074746 TCTAGGAGTGCCATGTAGGATAA 57.925 43.478 0.00 0.00 41.22 1.75
631 656 5.464069 TCTAGGAGTGCCATGTAGGATAAA 58.536 41.667 0.00 0.00 41.22 1.40
632 657 6.084738 TCTAGGAGTGCCATGTAGGATAAAT 58.915 40.000 0.00 0.00 41.22 1.40
633 658 4.978099 AGGAGTGCCATGTAGGATAAATG 58.022 43.478 0.00 0.00 41.22 2.32
634 659 4.660303 AGGAGTGCCATGTAGGATAAATGA 59.340 41.667 0.00 0.00 38.63 2.57
635 660 5.311649 AGGAGTGCCATGTAGGATAAATGAT 59.688 40.000 0.00 0.00 38.63 2.45
636 661 5.413833 GGAGTGCCATGTAGGATAAATGATG 59.586 44.000 0.00 0.00 38.63 3.07
637 662 6.191657 AGTGCCATGTAGGATAAATGATGA 57.808 37.500 0.00 0.00 38.63 2.92
638 663 6.236409 AGTGCCATGTAGGATAAATGATGAG 58.764 40.000 0.00 0.00 38.63 2.90
639 664 6.000219 GTGCCATGTAGGATAAATGATGAGT 59.000 40.000 0.00 0.00 38.63 3.41
640 665 6.488006 GTGCCATGTAGGATAAATGATGAGTT 59.512 38.462 0.00 0.00 38.63 3.01
641 666 6.487668 TGCCATGTAGGATAAATGATGAGTTG 59.512 38.462 0.00 0.00 38.63 3.16
642 667 6.712095 GCCATGTAGGATAAATGATGAGTTGA 59.288 38.462 0.00 0.00 38.63 3.18
643 668 7.229306 GCCATGTAGGATAAATGATGAGTTGAA 59.771 37.037 0.00 0.00 38.63 2.69
644 669 8.781196 CCATGTAGGATAAATGATGAGTTGAAG 58.219 37.037 0.00 0.00 38.63 3.02
645 670 8.781196 CATGTAGGATAAATGATGAGTTGAAGG 58.219 37.037 0.00 0.00 38.63 3.46
646 671 8.089625 TGTAGGATAAATGATGAGTTGAAGGA 57.910 34.615 0.00 0.00 0.00 3.36
647 672 8.206867 TGTAGGATAAATGATGAGTTGAAGGAG 58.793 37.037 0.00 0.00 0.00 3.69
648 673 7.443302 AGGATAAATGATGAGTTGAAGGAGA 57.557 36.000 0.00 0.00 0.00 3.71
649 674 7.507829 AGGATAAATGATGAGTTGAAGGAGAG 58.492 38.462 0.00 0.00 0.00 3.20
650 675 7.346698 AGGATAAATGATGAGTTGAAGGAGAGA 59.653 37.037 0.00 0.00 0.00 3.10
651 676 7.656948 GGATAAATGATGAGTTGAAGGAGAGAG 59.343 40.741 0.00 0.00 0.00 3.20
652 677 6.617782 AAATGATGAGTTGAAGGAGAGAGA 57.382 37.500 0.00 0.00 0.00 3.10
653 678 6.617782 AATGATGAGTTGAAGGAGAGAGAA 57.382 37.500 0.00 0.00 0.00 2.87
654 679 5.398603 TGATGAGTTGAAGGAGAGAGAAC 57.601 43.478 0.00 0.00 0.00 3.01
655 680 5.083122 TGATGAGTTGAAGGAGAGAGAACT 58.917 41.667 0.00 0.00 0.00 3.01
656 681 5.184864 TGATGAGTTGAAGGAGAGAGAACTC 59.815 44.000 0.00 0.00 41.85 3.01
657 682 3.504134 TGAGTTGAAGGAGAGAGAACTCG 59.496 47.826 0.00 0.00 46.64 4.18
658 683 3.492337 AGTTGAAGGAGAGAGAACTCGT 58.508 45.455 0.00 0.00 46.64 4.18
659 684 4.653868 AGTTGAAGGAGAGAGAACTCGTA 58.346 43.478 0.00 0.00 46.64 3.43
660 685 5.071370 AGTTGAAGGAGAGAGAACTCGTAA 58.929 41.667 0.00 0.00 46.64 3.18
661 686 5.182380 AGTTGAAGGAGAGAGAACTCGTAAG 59.818 44.000 0.00 0.00 46.64 2.34
662 687 4.907809 TGAAGGAGAGAGAACTCGTAAGA 58.092 43.478 0.00 0.00 46.64 2.10
706 731 7.953005 TGTAAGAGAAGACAAGAGATGATCT 57.047 36.000 0.00 0.00 41.27 2.75
707 732 7.995289 TGTAAGAGAAGACAAGAGATGATCTC 58.005 38.462 14.47 14.47 43.70 2.75
722 747 8.464770 GAGATGATCTCTTAGCACAATATGTC 57.535 38.462 14.98 0.00 40.30 3.06
723 748 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
724 749 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
725 750 7.352079 TGATCTCTTAGCACAATATGTCTCA 57.648 36.000 0.00 0.00 0.00 3.27
726 751 7.960262 TGATCTCTTAGCACAATATGTCTCAT 58.040 34.615 0.00 0.00 0.00 2.90
727 752 8.087136 TGATCTCTTAGCACAATATGTCTCATC 58.913 37.037 0.00 0.00 0.00 2.92
728 753 7.352079 TCTCTTAGCACAATATGTCTCATCA 57.648 36.000 0.00 0.00 0.00 3.07
729 754 7.205992 TCTCTTAGCACAATATGTCTCATCAC 58.794 38.462 0.00 0.00 0.00 3.06
730 755 5.979517 TCTTAGCACAATATGTCTCATCACG 59.020 40.000 0.00 0.00 0.00 4.35
731 756 4.128925 AGCACAATATGTCTCATCACGT 57.871 40.909 0.00 0.00 0.00 4.49
732 757 4.507710 AGCACAATATGTCTCATCACGTT 58.492 39.130 0.00 0.00 0.00 3.99
733 758 4.937620 AGCACAATATGTCTCATCACGTTT 59.062 37.500 0.00 0.00 0.00 3.60
734 759 5.412594 AGCACAATATGTCTCATCACGTTTT 59.587 36.000 0.00 0.00 0.00 2.43
735 760 6.072508 AGCACAATATGTCTCATCACGTTTTT 60.073 34.615 0.00 0.00 0.00 1.94
736 761 7.119116 AGCACAATATGTCTCATCACGTTTTTA 59.881 33.333 0.00 0.00 0.00 1.52
737 762 7.426456 GCACAATATGTCTCATCACGTTTTTAG 59.574 37.037 0.00 0.00 0.00 1.85
738 763 8.443160 CACAATATGTCTCATCACGTTTTTAGT 58.557 33.333 0.00 0.00 0.00 2.24
739 764 9.647797 ACAATATGTCTCATCACGTTTTTAGTA 57.352 29.630 0.00 0.00 0.00 1.82
817 842 9.781834 TTTATCATCTTTAAATTACGTGCAAGG 57.218 29.630 4.26 0.00 0.00 3.61
818 843 7.624360 ATCATCTTTAAATTACGTGCAAGGA 57.376 32.000 4.26 0.00 0.00 3.36
819 844 7.624360 TCATCTTTAAATTACGTGCAAGGAT 57.376 32.000 4.26 0.00 0.00 3.24
820 845 8.725405 TCATCTTTAAATTACGTGCAAGGATA 57.275 30.769 4.26 0.00 0.00 2.59
821 846 9.168451 TCATCTTTAAATTACGTGCAAGGATAA 57.832 29.630 4.26 0.00 0.00 1.75
834 859 2.280186 GATAAGCGCCCGGTGGAG 60.280 66.667 2.29 0.00 34.00 3.86
882 908 2.169561 TGCTGTAATCTACCGCATTCCA 59.830 45.455 0.00 0.00 42.63 3.53
894 920 2.099141 GCATTCCATAGCGCCTGATA 57.901 50.000 2.29 0.00 0.00 2.15
895 921 2.426522 GCATTCCATAGCGCCTGATAA 58.573 47.619 2.29 0.89 0.00 1.75
896 922 3.012518 GCATTCCATAGCGCCTGATAAT 58.987 45.455 2.29 3.29 0.00 1.28
897 923 3.064545 GCATTCCATAGCGCCTGATAATC 59.935 47.826 2.29 0.00 0.00 1.75
898 924 4.511527 CATTCCATAGCGCCTGATAATCT 58.488 43.478 2.29 0.00 0.00 2.40
899 925 3.599730 TCCATAGCGCCTGATAATCTG 57.400 47.619 2.29 0.00 0.00 2.90
900 926 3.165071 TCCATAGCGCCTGATAATCTGA 58.835 45.455 2.29 0.00 0.00 3.27
901 927 3.771479 TCCATAGCGCCTGATAATCTGAT 59.229 43.478 2.29 0.00 0.00 2.90
1359 1387 1.449070 CCTCTGCTCATCGCTGCAA 60.449 57.895 0.00 0.00 38.81 4.08
1407 1435 0.179145 GCAATGCATCTGCGAGCTTT 60.179 50.000 14.98 0.00 45.83 3.51
1460 1488 2.363147 GGAGGTGAGGGCGTCTCT 60.363 66.667 8.82 6.10 42.86 3.10
1502 1530 6.015434 TGCGTTGCTATCCATATTCTCTAGAA 60.015 38.462 0.00 0.00 38.56 2.10
1605 1634 4.379813 GCAATGTGTGGTGATTTGTAGAGG 60.380 45.833 0.00 0.00 0.00 3.69
1789 2010 5.109210 GTTGAAAGTTGCTGCTTTAGGTTT 58.891 37.500 0.00 0.00 38.64 3.27
1922 2143 4.024893 TGCGTTGTTTGAGATCAAAGAGTC 60.025 41.667 8.22 4.55 45.36 3.36
1923 2144 4.212214 GCGTTGTTTGAGATCAAAGAGTCT 59.788 41.667 8.22 0.00 45.36 3.24
1944 2165 7.558604 AGTCTTGGTGTTTACACTTTACACTA 58.441 34.615 12.32 0.00 45.73 2.74
2184 2406 0.957395 AATGGCTCGGACAGTGCAAG 60.957 55.000 0.00 0.00 40.84 4.01
2193 2415 0.615331 GACAGTGCAAGATGAGGGGA 59.385 55.000 0.00 0.00 0.00 4.81
2207 2429 3.321039 TGAGGGGAATGACATGCTAGAT 58.679 45.455 0.00 0.00 0.00 1.98
2286 2508 4.593206 TCTTAATCTCCAGGACACACAGTT 59.407 41.667 0.00 0.00 0.00 3.16
2312 2534 6.606395 CCCACCCCTATATAGTGTATAGTGAC 59.394 46.154 8.92 0.00 0.00 3.67
2318 2540 7.038048 CCTATATAGTGTATAGTGACGACCGA 58.962 42.308 8.92 0.00 0.00 4.69
2506 2728 2.550978 CGAACAACCTGACTGTCTTGT 58.449 47.619 9.51 8.52 0.00 3.16
2551 2773 1.009675 GCCGAATGTATTGCTGCCG 60.010 57.895 0.00 0.00 0.00 5.69
2677 2900 7.624661 CGGTATGATGCATATGCTATAGTTTG 58.375 38.462 27.13 9.22 42.66 2.93
2687 2910 8.017946 GCATATGCTATAGTTTGCTTTAAGGAC 58.982 37.037 20.64 0.00 38.21 3.85
2707 2930 5.048507 GGACCTCTGTTACGGATATTTGAC 58.951 45.833 0.00 0.00 0.00 3.18
2758 2986 7.679638 GCATTTGAAGGTGCTAGGTAGTATTTG 60.680 40.741 0.00 0.00 38.30 2.32
2762 2990 6.326583 TGAAGGTGCTAGGTAGTATTTGCTAT 59.673 38.462 0.00 0.00 0.00 2.97
2763 2991 6.347859 AGGTGCTAGGTAGTATTTGCTATC 57.652 41.667 0.00 0.00 0.00 2.08
2764 2992 5.246429 AGGTGCTAGGTAGTATTTGCTATCC 59.754 44.000 0.00 0.00 0.00 2.59
2898 3137 0.324645 GGGCAATGAAGATGGTGGGT 60.325 55.000 0.00 0.00 0.00 4.51
2935 3174 2.924290 GCAGACGACAGTTCAGGATAAC 59.076 50.000 0.00 0.00 0.00 1.89
2997 3236 4.023021 TGGGCGTTAAGGTTGTTTGAATAC 60.023 41.667 0.00 0.00 0.00 1.89
3099 3344 2.418083 GGCCCATTCTGCTTTCCCG 61.418 63.158 0.00 0.00 0.00 5.14
3235 3481 8.912614 ATTCGTTTAGGGTAGATAGGGATTAT 57.087 34.615 0.00 0.00 0.00 1.28
3261 3507 3.054875 TGATCTCTTGTGATGTTCTGGGG 60.055 47.826 0.00 0.00 0.00 4.96
3264 3510 3.588842 TCTCTTGTGATGTTCTGGGGAAT 59.411 43.478 0.00 0.00 33.71 3.01
3544 3917 9.479549 TCCATATTCATATACTGCAGTATCTGA 57.520 33.333 34.07 34.07 40.23 3.27
3594 3967 3.260740 CTCTGAAGTCTGATGCTTCCAC 58.739 50.000 5.80 0.00 41.03 4.02
3779 4153 0.610232 GAAGCAACCATCTGGGCAGT 60.610 55.000 0.54 0.00 42.05 4.40
3794 4168 2.289506 GGGCAGTACGGAAAGAAGAGTT 60.290 50.000 0.00 0.00 0.00 3.01
3799 4173 5.715070 CAGTACGGAAAGAAGAGTTGATCT 58.285 41.667 0.00 0.00 41.27 2.75
3842 4216 7.517343 CATGATCTGTAATCATGGATCGTAC 57.483 40.000 16.63 0.00 47.00 3.67
3843 4217 6.025749 TGATCTGTAATCATGGATCGTACC 57.974 41.667 0.00 0.00 37.84 3.34
3844 4218 4.499037 TCTGTAATCATGGATCGTACCG 57.501 45.455 0.00 0.00 0.00 4.02
3845 4219 3.887110 TCTGTAATCATGGATCGTACCGT 59.113 43.478 0.00 0.00 0.00 4.83
3846 4220 4.340097 TCTGTAATCATGGATCGTACCGTT 59.660 41.667 0.00 0.00 0.00 4.44
3847 4221 4.613944 TGTAATCATGGATCGTACCGTTC 58.386 43.478 0.00 0.00 0.00 3.95
3848 4222 2.814280 ATCATGGATCGTACCGTTCC 57.186 50.000 6.76 6.76 43.52 3.62
3849 4223 1.771565 TCATGGATCGTACCGTTCCT 58.228 50.000 13.17 0.00 43.59 3.36
3850 4224 2.934887 TCATGGATCGTACCGTTCCTA 58.065 47.619 13.17 3.08 43.59 2.94
3851 4225 3.289836 TCATGGATCGTACCGTTCCTAA 58.710 45.455 13.17 0.00 43.59 2.69
3852 4226 3.700539 TCATGGATCGTACCGTTCCTAAA 59.299 43.478 13.17 0.00 43.59 1.85
3853 4227 4.342951 TCATGGATCGTACCGTTCCTAAAT 59.657 41.667 13.17 0.00 43.59 1.40
3854 4228 5.535783 TCATGGATCGTACCGTTCCTAAATA 59.464 40.000 13.17 0.00 43.59 1.40
3855 4229 5.186996 TGGATCGTACCGTTCCTAAATAC 57.813 43.478 13.17 0.00 43.59 1.89
3856 4230 4.889409 TGGATCGTACCGTTCCTAAATACT 59.111 41.667 13.17 0.00 43.59 2.12
3857 4231 5.009010 TGGATCGTACCGTTCCTAAATACTC 59.991 44.000 13.17 0.00 43.59 2.59
3858 4232 4.900635 TCGTACCGTTCCTAAATACTCC 57.099 45.455 0.00 0.00 0.00 3.85
3859 4233 3.632145 TCGTACCGTTCCTAAATACTCCC 59.368 47.826 0.00 0.00 0.00 4.30
3860 4234 3.633986 CGTACCGTTCCTAAATACTCCCT 59.366 47.826 0.00 0.00 0.00 4.20
3861 4235 4.261363 CGTACCGTTCCTAAATACTCCCTC 60.261 50.000 0.00 0.00 0.00 4.30
3862 4236 3.036819 ACCGTTCCTAAATACTCCCTCC 58.963 50.000 0.00 0.00 0.00 4.30
3863 4237 2.035576 CCGTTCCTAAATACTCCCTCCG 59.964 54.545 0.00 0.00 0.00 4.63
3864 4238 2.692041 CGTTCCTAAATACTCCCTCCGT 59.308 50.000 0.00 0.00 0.00 4.69
3865 4239 3.243334 CGTTCCTAAATACTCCCTCCGTC 60.243 52.174 0.00 0.00 0.00 4.79
3866 4240 2.954792 TCCTAAATACTCCCTCCGTCC 58.045 52.381 0.00 0.00 0.00 4.79
3867 4241 1.612463 CCTAAATACTCCCTCCGTCCG 59.388 57.143 0.00 0.00 0.00 4.79
3868 4242 1.612463 CTAAATACTCCCTCCGTCCGG 59.388 57.143 0.00 0.00 0.00 5.14
3869 4243 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
3870 4244 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3871 4245 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
3872 4246 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3873 4247 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3874 4248 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3875 4249 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3876 4250 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
3877 4251 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
3878 4252 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
3879 4253 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
3880 4254 0.452987 CCGTCCGGAAATACTCGTCA 59.547 55.000 5.23 0.00 37.50 4.35
3881 4255 1.066605 CCGTCCGGAAATACTCGTCAT 59.933 52.381 5.23 0.00 37.50 3.06
3882 4256 2.480759 CCGTCCGGAAATACTCGTCATT 60.481 50.000 5.23 0.00 37.50 2.57
3883 4257 2.534349 CGTCCGGAAATACTCGTCATTG 59.466 50.000 5.23 0.00 0.00 2.82
3884 4258 3.732774 CGTCCGGAAATACTCGTCATTGA 60.733 47.826 5.23 0.00 0.00 2.57
3885 4259 4.178540 GTCCGGAAATACTCGTCATTGAA 58.821 43.478 5.23 0.00 0.00 2.69
3886 4260 4.628333 GTCCGGAAATACTCGTCATTGAAA 59.372 41.667 5.23 0.00 0.00 2.69
3887 4261 5.293569 GTCCGGAAATACTCGTCATTGAAAT 59.706 40.000 5.23 0.00 0.00 2.17
3888 4262 5.293324 TCCGGAAATACTCGTCATTGAAATG 59.707 40.000 0.00 0.00 37.75 2.32
3889 4263 5.293324 CCGGAAATACTCGTCATTGAAATGA 59.707 40.000 0.00 1.55 42.78 2.57
3890 4264 6.183360 CCGGAAATACTCGTCATTGAAATGAA 60.183 38.462 7.29 0.00 46.13 2.57
3891 4265 7.409697 CGGAAATACTCGTCATTGAAATGAAT 58.590 34.615 7.29 0.00 46.13 2.57
3892 4266 7.374228 CGGAAATACTCGTCATTGAAATGAATG 59.626 37.037 7.29 4.19 46.13 2.67
3893 4267 8.184192 GGAAATACTCGTCATTGAAATGAATGT 58.816 33.333 7.29 8.90 46.13 2.71
3897 4271 9.770097 ATACTCGTCATTGAAATGAATGTATCT 57.230 29.630 7.29 0.00 46.13 1.98
3899 4273 9.254133 ACTCGTCATTGAAATGAATGTATCTAG 57.746 33.333 7.29 0.00 46.13 2.43
3900 4274 9.468532 CTCGTCATTGAAATGAATGTATCTAGA 57.531 33.333 7.29 0.00 46.13 2.43
3901 4275 9.987272 TCGTCATTGAAATGAATGTATCTAGAT 57.013 29.630 10.73 10.73 46.13 1.98
3935 4309 9.857656 AGTTGTAGATACATCCATTTTCATCAT 57.142 29.630 0.00 0.00 35.89 2.45
3955 4329 6.344572 TCATTTTGATGACGAGTATTTCCG 57.655 37.500 0.00 0.00 0.00 4.30
3956 4330 5.293324 TCATTTTGATGACGAGTATTTCCGG 59.707 40.000 0.00 0.00 0.00 5.14
3957 4331 4.459390 TTTGATGACGAGTATTTCCGGA 57.541 40.909 0.00 0.00 0.00 5.14
3958 4332 3.431922 TGATGACGAGTATTTCCGGAC 57.568 47.619 1.83 0.00 0.00 4.79
3959 4333 2.223409 TGATGACGAGTATTTCCGGACG 60.223 50.000 1.83 5.89 0.00 4.79
3960 4334 0.452987 TGACGAGTATTTCCGGACGG 59.547 55.000 1.83 3.96 0.00 4.79
3961 4335 0.734889 GACGAGTATTTCCGGACGGA 59.265 55.000 1.83 9.76 43.52 4.69
3962 4336 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
3963 4337 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30
3964 4338 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
3965 4339 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3966 4340 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3967 4341 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3968 4342 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3969 4343 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
3970 4344 0.846015 TTCCGGACGGAGGGAGTATA 59.154 55.000 13.64 0.00 46.06 1.47
3971 4345 0.846015 TCCGGACGGAGGGAGTATAA 59.154 55.000 9.76 0.00 39.76 0.98
3972 4346 1.202855 TCCGGACGGAGGGAGTATAAG 60.203 57.143 9.76 0.00 39.76 1.73
3973 4347 1.478288 CCGGACGGAGGGAGTATAAGT 60.478 57.143 4.40 0.00 37.50 2.24
3974 4348 1.878734 CGGACGGAGGGAGTATAAGTC 59.121 57.143 0.00 0.00 0.00 3.01
3975 4349 2.486907 CGGACGGAGGGAGTATAAGTCT 60.487 54.545 0.00 0.00 0.00 3.24
3976 4350 3.564264 GGACGGAGGGAGTATAAGTCTT 58.436 50.000 0.00 0.00 0.00 3.01
3977 4351 3.959449 GGACGGAGGGAGTATAAGTCTTT 59.041 47.826 0.00 0.00 0.00 2.52
3978 4352 4.037803 GGACGGAGGGAGTATAAGTCTTTC 59.962 50.000 0.00 0.00 0.00 2.62
3979 4353 4.869451 ACGGAGGGAGTATAAGTCTTTCT 58.131 43.478 0.00 0.00 0.00 2.52
3980 4354 6.011122 ACGGAGGGAGTATAAGTCTTTCTA 57.989 41.667 0.00 0.00 0.00 2.10
3981 4355 6.063404 ACGGAGGGAGTATAAGTCTTTCTAG 58.937 44.000 0.00 0.00 0.00 2.43
3982 4356 6.126536 ACGGAGGGAGTATAAGTCTTTCTAGA 60.127 42.308 0.00 0.00 0.00 2.43
3983 4357 6.428771 CGGAGGGAGTATAAGTCTTTCTAGAG 59.571 46.154 0.00 0.00 0.00 2.43
3984 4358 7.519927 GGAGGGAGTATAAGTCTTTCTAGAGA 58.480 42.308 0.00 0.00 0.00 3.10
3985 4359 8.168058 GGAGGGAGTATAAGTCTTTCTAGAGAT 58.832 40.741 0.00 0.00 0.00 2.75
3986 4360 9.582648 GAGGGAGTATAAGTCTTTCTAGAGATT 57.417 37.037 0.00 0.00 0.00 2.40
3987 4361 9.945633 AGGGAGTATAAGTCTTTCTAGAGATTT 57.054 33.333 0.00 0.00 31.59 2.17
3996 4370 8.830915 AGTCTTTCTAGAGATTTCACTATGGA 57.169 34.615 0.00 0.00 0.00 3.41
3997 4371 8.691797 AGTCTTTCTAGAGATTTCACTATGGAC 58.308 37.037 0.00 0.00 0.00 4.02
3998 4372 8.691797 GTCTTTCTAGAGATTTCACTATGGACT 58.308 37.037 0.00 0.00 0.00 3.85
3999 4373 9.922477 TCTTTCTAGAGATTTCACTATGGACTA 57.078 33.333 0.00 0.00 0.00 2.59
4000 4374 9.959749 CTTTCTAGAGATTTCACTATGGACTAC 57.040 37.037 0.00 0.00 0.00 2.73
4001 4375 9.475620 TTTCTAGAGATTTCACTATGGACTACA 57.524 33.333 0.00 0.00 0.00 2.74
4002 4376 9.647918 TTCTAGAGATTTCACTATGGACTACAT 57.352 33.333 0.00 0.00 43.68 2.29
4005 4379 7.877003 AGAGATTTCACTATGGACTACATACG 58.123 38.462 0.00 0.00 41.03 3.06
4006 4380 6.982852 AGATTTCACTATGGACTACATACGG 58.017 40.000 0.00 0.00 41.03 4.02
4007 4381 6.776116 AGATTTCACTATGGACTACATACGGA 59.224 38.462 0.00 0.00 41.03 4.69
4008 4382 6.971726 TTTCACTATGGACTACATACGGAT 57.028 37.500 0.00 0.00 41.03 4.18
4009 4383 5.959618 TCACTATGGACTACATACGGATG 57.040 43.478 5.94 5.94 41.03 3.51
4011 4385 6.536447 TCACTATGGACTACATACGGATGTA 58.464 40.000 19.32 19.32 44.77 2.29
4012 4386 7.173032 TCACTATGGACTACATACGGATGTAT 58.827 38.462 20.64 9.39 45.42 2.29
4025 4399 7.502120 ATACGGATGTATGTAGACGTAGTTT 57.498 36.000 0.00 0.00 39.83 2.66
4026 4400 8.607441 ATACGGATGTATGTAGACGTAGTTTA 57.393 34.615 0.00 0.00 39.83 2.01
4027 4401 8.715998 ATACGGATGTATGTAGACGTAGTTTAG 58.284 37.037 0.00 0.00 39.83 1.85
4053 4427 6.857964 AGTGTAAATTCACTCATTTTGCTTCG 59.142 34.615 0.00 0.00 44.07 3.79
4054 4428 6.636850 GTGTAAATTCACTCATTTTGCTTCGT 59.363 34.615 0.00 0.00 35.68 3.85
4055 4429 7.801315 GTGTAAATTCACTCATTTTGCTTCGTA 59.199 33.333 0.00 0.00 35.68 3.43
4056 4430 8.511321 TGTAAATTCACTCATTTTGCTTCGTAT 58.489 29.630 0.00 0.00 0.00 3.06
4057 4431 7.801547 AAATTCACTCATTTTGCTTCGTATG 57.198 32.000 0.00 0.00 0.00 2.39
4058 4432 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
4059 4433 7.609760 ATTCACTCATTTTGCTTCGTATGTA 57.390 32.000 0.00 0.00 0.00 2.29
4060 4434 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
4061 4435 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
4062 4436 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
4063 4437 6.311445 CACTCATTTTGCTTCGTATGTAGTCT 59.689 38.462 0.00 0.00 0.00 3.24
4064 4438 6.531948 ACTCATTTTGCTTCGTATGTAGTCTC 59.468 38.462 0.00 0.00 0.00 3.36
4065 4439 6.631016 TCATTTTGCTTCGTATGTAGTCTCT 58.369 36.000 0.00 0.00 0.00 3.10
4066 4440 7.097192 TCATTTTGCTTCGTATGTAGTCTCTT 58.903 34.615 0.00 0.00 0.00 2.85
4067 4441 8.248253 TCATTTTGCTTCGTATGTAGTCTCTTA 58.752 33.333 0.00 0.00 0.00 2.10
4068 4442 9.035607 CATTTTGCTTCGTATGTAGTCTCTTAT 57.964 33.333 0.00 0.00 0.00 1.73
4069 4443 8.997621 TTTTGCTTCGTATGTAGTCTCTTATT 57.002 30.769 0.00 0.00 0.00 1.40
4070 4444 7.987268 TTGCTTCGTATGTAGTCTCTTATTG 57.013 36.000 0.00 0.00 0.00 1.90
4071 4445 6.504398 TGCTTCGTATGTAGTCTCTTATTGG 58.496 40.000 0.00 0.00 0.00 3.16
4072 4446 6.320418 TGCTTCGTATGTAGTCTCTTATTGGA 59.680 38.462 0.00 0.00 0.00 3.53
4073 4447 7.147966 TGCTTCGTATGTAGTCTCTTATTGGAA 60.148 37.037 0.00 0.00 0.00 3.53
4074 4448 7.868415 GCTTCGTATGTAGTCTCTTATTGGAAT 59.132 37.037 0.00 0.00 0.00 3.01
4075 4449 9.400638 CTTCGTATGTAGTCTCTTATTGGAATC 57.599 37.037 0.00 0.00 0.00 2.52
4076 4450 7.883217 TCGTATGTAGTCTCTTATTGGAATCC 58.117 38.462 0.00 0.00 0.00 3.01
4077 4451 7.039923 TCGTATGTAGTCTCTTATTGGAATCCC 60.040 40.741 0.00 0.00 0.00 3.85
4078 4452 7.039644 CGTATGTAGTCTCTTATTGGAATCCCT 60.040 40.741 0.00 0.00 0.00 4.20
4079 4453 9.310449 GTATGTAGTCTCTTATTGGAATCCCTA 57.690 37.037 0.00 0.00 0.00 3.53
4080 4454 8.798975 ATGTAGTCTCTTATTGGAATCCCTAA 57.201 34.615 0.00 0.00 0.00 2.69
4081 4455 8.618240 TGTAGTCTCTTATTGGAATCCCTAAA 57.382 34.615 0.00 0.00 0.00 1.85
4082 4456 9.053472 TGTAGTCTCTTATTGGAATCCCTAAAA 57.947 33.333 0.00 0.00 0.00 1.52
4083 4457 9.901172 GTAGTCTCTTATTGGAATCCCTAAAAA 57.099 33.333 0.00 0.00 0.00 1.94
4085 4459 8.836735 AGTCTCTTATTGGAATCCCTAAAAAGA 58.163 33.333 0.00 0.00 0.00 2.52
4086 4460 8.894731 GTCTCTTATTGGAATCCCTAAAAAGAC 58.105 37.037 0.00 7.29 0.00 3.01
4087 4461 8.053355 TCTCTTATTGGAATCCCTAAAAAGACC 58.947 37.037 0.00 0.00 0.00 3.85
4088 4462 7.939781 TCTTATTGGAATCCCTAAAAAGACCT 58.060 34.615 0.00 0.00 0.00 3.85
4089 4463 9.064602 TCTTATTGGAATCCCTAAAAAGACCTA 57.935 33.333 0.00 0.00 0.00 3.08
4090 4464 9.868160 CTTATTGGAATCCCTAAAAAGACCTAT 57.132 33.333 0.00 0.00 0.00 2.57
4206 4580 9.995003 ATATGGTCAGAATTCTAGAAGTTGATC 57.005 33.333 7.86 13.99 0.00 2.92
4213 4587 7.605691 CAGAATTCTAGAAGTTGATCTGGTGTT 59.394 37.037 7.86 0.00 31.68 3.32
4246 4620 2.294233 GGAGATTGTGCTGCTTTTGTGA 59.706 45.455 0.00 0.00 0.00 3.58
4274 4648 4.955811 TCCTGATGAATAGCGGTGTATT 57.044 40.909 0.00 0.00 0.00 1.89
4491 4865 3.575351 GACGCTGGAACTGACCGCT 62.575 63.158 0.00 0.00 0.00 5.52
4996 5370 3.243035 CGCATTTGAAGGAACAGACACAA 60.243 43.478 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.006571 CACCGTAGTCGCAGGTTGT 60.007 57.895 0.00 0.00 35.85 3.32
18 19 4.415332 CAGACCGCGCACCGTAGT 62.415 66.667 8.75 0.00 34.38 2.73
32 33 4.373116 GGGACGCAACGGAGCAGA 62.373 66.667 2.33 0.00 0.00 4.26
41 42 2.429930 CAAGGGTGAGGGACGCAA 59.570 61.111 0.00 0.00 41.67 4.85
79 81 1.227527 CGAACAGAGGCACACACCA 60.228 57.895 0.00 0.00 0.00 4.17
119 123 4.016706 GGGTGCTAGTGCCCGTGT 62.017 66.667 7.79 0.00 38.71 4.49
161 165 3.739613 ATCCCCTTCCCCGCCAAC 61.740 66.667 0.00 0.00 0.00 3.77
162 166 3.738481 CATCCCCTTCCCCGCCAA 61.738 66.667 0.00 0.00 0.00 4.52
182 187 2.610859 AATCTGCTCCACCCCCGT 60.611 61.111 0.00 0.00 0.00 5.28
221 226 2.232298 CTGACCCTCCCGTCTTGAGC 62.232 65.000 0.00 0.00 33.70 4.26
274 280 4.933064 GATCTCCAGCGTCGCCCG 62.933 72.222 14.86 5.35 40.40 6.13
275 281 4.593864 GGATCTCCAGCGTCGCCC 62.594 72.222 14.86 1.72 35.64 6.13
317 323 0.531974 TGCGTTGACTTGGAGTGGTC 60.532 55.000 0.00 0.00 0.00 4.02
333 339 0.734253 CTCCGTCCTCAACTTCTGCG 60.734 60.000 0.00 0.00 0.00 5.18
365 389 2.202610 CGCAATGTCGAGCTCCGA 60.203 61.111 8.47 6.15 46.35 4.55
381 405 2.545526 CTGATTCCGATCCAATCCAACG 59.454 50.000 8.80 0.00 30.30 4.10
384 408 2.771372 TGTCTGATTCCGATCCAATCCA 59.229 45.455 8.80 0.03 30.30 3.41
396 420 4.141959 CCTCTCCTCTTTCCTGTCTGATTC 60.142 50.000 0.00 0.00 0.00 2.52
404 428 2.699846 CTCCATCCTCTCCTCTTTCCTG 59.300 54.545 0.00 0.00 0.00 3.86
408 432 1.118838 CGCTCCATCCTCTCCTCTTT 58.881 55.000 0.00 0.00 0.00 2.52
416 440 1.238439 CTCTCTCTCGCTCCATCCTC 58.762 60.000 0.00 0.00 0.00 3.71
421 445 1.650242 ATCCCCTCTCTCTCGCTCCA 61.650 60.000 0.00 0.00 0.00 3.86
427 451 3.025322 TCACTCAATCCCCTCTCTCTC 57.975 52.381 0.00 0.00 0.00 3.20
428 452 3.103742 GTTCACTCAATCCCCTCTCTCT 58.896 50.000 0.00 0.00 0.00 3.10
460 484 5.560966 TGTCTCAAAATAAAATCCTCGCC 57.439 39.130 0.00 0.00 0.00 5.54
462 486 7.761409 TGGATTGTCTCAAAATAAAATCCTCG 58.239 34.615 12.14 0.00 42.27 4.63
463 487 9.578439 CTTGGATTGTCTCAAAATAAAATCCTC 57.422 33.333 12.14 0.00 42.27 3.71
464 488 8.037166 GCTTGGATTGTCTCAAAATAAAATCCT 58.963 33.333 12.14 0.00 42.27 3.24
465 489 7.009540 CGCTTGGATTGTCTCAAAATAAAATCC 59.990 37.037 5.48 5.48 42.17 3.01
466 490 7.754924 TCGCTTGGATTGTCTCAAAATAAAATC 59.245 33.333 0.00 0.00 0.00 2.17
467 491 7.601856 TCGCTTGGATTGTCTCAAAATAAAAT 58.398 30.769 0.00 0.00 0.00 1.82
472 496 3.441572 CCTCGCTTGGATTGTCTCAAAAT 59.558 43.478 0.00 0.00 0.00 1.82
476 500 1.205655 CTCCTCGCTTGGATTGTCTCA 59.794 52.381 0.00 0.00 35.30 3.27
513 537 2.671963 GACCCACGGCTTTCCCAC 60.672 66.667 0.00 0.00 0.00 4.61
521 546 3.061848 CCACCATTGACCCACGGC 61.062 66.667 0.00 0.00 0.00 5.68
532 557 1.910580 CTAACAGTCCGGCCCACCAT 61.911 60.000 0.00 0.00 34.57 3.55
533 558 2.527123 TAACAGTCCGGCCCACCA 60.527 61.111 0.00 0.00 34.57 4.17
534 559 2.267961 CTAACAGTCCGGCCCACC 59.732 66.667 0.00 0.00 0.00 4.61
535 560 2.436115 GCTAACAGTCCGGCCCAC 60.436 66.667 0.00 0.00 0.00 4.61
536 561 2.463589 CTTGCTAACAGTCCGGCCCA 62.464 60.000 0.00 0.00 0.00 5.36
539 564 2.399356 GGCTTGCTAACAGTCCGGC 61.399 63.158 0.00 0.00 0.00 6.13
540 565 2.100631 CGGCTTGCTAACAGTCCGG 61.101 63.158 0.00 0.00 38.24 5.14
541 566 1.352156 GACGGCTTGCTAACAGTCCG 61.352 60.000 6.59 6.59 43.70 4.79
542 567 1.019805 GGACGGCTTGCTAACAGTCC 61.020 60.000 5.30 5.30 40.85 3.85
543 568 0.037232 AGGACGGCTTGCTAACAGTC 60.037 55.000 0.00 0.00 0.00 3.51
544 569 1.263356 TAGGACGGCTTGCTAACAGT 58.737 50.000 0.00 0.00 0.00 3.55
568 593 3.137728 GCCCTTAGCCTAAATTGAGGGTA 59.862 47.826 15.73 15.73 45.60 3.69
570 595 2.091885 TGCCCTTAGCCTAAATTGAGGG 60.092 50.000 11.12 1.61 45.32 4.30
571 596 3.297134 TGCCCTTAGCCTAAATTGAGG 57.703 47.619 4.18 4.18 42.71 3.86
572 597 9.905713 TTATATATGCCCTTAGCCTAAATTGAG 57.094 33.333 0.00 0.00 42.71 3.02
575 600 9.646522 CCATTATATATGCCCTTAGCCTAAATT 57.353 33.333 0.00 0.00 42.71 1.82
576 601 8.791749 ACCATTATATATGCCCTTAGCCTAAAT 58.208 33.333 0.00 0.00 42.71 1.40
577 602 8.052748 CACCATTATATATGCCCTTAGCCTAAA 58.947 37.037 0.00 0.00 42.71 1.85
578 603 7.183839 ACACCATTATATATGCCCTTAGCCTAA 59.816 37.037 0.00 0.00 42.71 2.69
579 604 6.676632 ACACCATTATATATGCCCTTAGCCTA 59.323 38.462 0.00 0.00 42.71 3.93
580 605 5.492524 ACACCATTATATATGCCCTTAGCCT 59.507 40.000 0.00 0.00 42.71 4.58
581 606 5.755849 ACACCATTATATATGCCCTTAGCC 58.244 41.667 0.00 0.00 42.71 3.93
587 612 9.561069 CCTAGAATAACACCATTATATATGCCC 57.439 37.037 0.00 0.00 0.00 5.36
593 618 8.322091 GGCACTCCTAGAATAACACCATTATAT 58.678 37.037 0.00 0.00 0.00 0.86
594 619 7.291416 TGGCACTCCTAGAATAACACCATTATA 59.709 37.037 0.00 0.00 0.00 0.98
595 620 6.101150 TGGCACTCCTAGAATAACACCATTAT 59.899 38.462 0.00 0.00 0.00 1.28
596 621 5.427157 TGGCACTCCTAGAATAACACCATTA 59.573 40.000 0.00 0.00 0.00 1.90
597 622 4.227300 TGGCACTCCTAGAATAACACCATT 59.773 41.667 0.00 0.00 0.00 3.16
598 623 3.780294 TGGCACTCCTAGAATAACACCAT 59.220 43.478 0.00 0.00 0.00 3.55
599 624 3.178046 TGGCACTCCTAGAATAACACCA 58.822 45.455 0.00 0.00 0.00 4.17
600 625 3.906720 TGGCACTCCTAGAATAACACC 57.093 47.619 0.00 0.00 0.00 4.16
601 626 4.770795 ACATGGCACTCCTAGAATAACAC 58.229 43.478 0.00 0.00 0.00 3.32
602 627 5.070446 CCTACATGGCACTCCTAGAATAACA 59.930 44.000 0.00 0.00 0.00 2.41
603 628 5.304614 TCCTACATGGCACTCCTAGAATAAC 59.695 44.000 0.00 0.00 35.26 1.89
604 629 5.464069 TCCTACATGGCACTCCTAGAATAA 58.536 41.667 0.00 0.00 35.26 1.40
605 630 5.074746 TCCTACATGGCACTCCTAGAATA 57.925 43.478 0.00 0.00 35.26 1.75
606 631 3.928754 TCCTACATGGCACTCCTAGAAT 58.071 45.455 0.00 0.00 35.26 2.40
607 632 3.398318 TCCTACATGGCACTCCTAGAA 57.602 47.619 0.00 0.00 35.26 2.10
608 633 3.619900 ATCCTACATGGCACTCCTAGA 57.380 47.619 0.00 0.00 35.26 2.43
609 634 5.808366 TTTATCCTACATGGCACTCCTAG 57.192 43.478 0.00 0.00 35.26 3.02
610 635 5.843969 TCATTTATCCTACATGGCACTCCTA 59.156 40.000 0.00 0.00 35.26 2.94
611 636 4.660303 TCATTTATCCTACATGGCACTCCT 59.340 41.667 0.00 0.00 35.26 3.69
612 637 4.973168 TCATTTATCCTACATGGCACTCC 58.027 43.478 0.00 0.00 35.26 3.85
613 638 6.233434 TCATCATTTATCCTACATGGCACTC 58.767 40.000 0.00 0.00 35.26 3.51
614 639 6.183361 ACTCATCATTTATCCTACATGGCACT 60.183 38.462 0.00 0.00 35.26 4.40
615 640 6.000219 ACTCATCATTTATCCTACATGGCAC 59.000 40.000 0.00 0.00 35.26 5.01
616 641 6.191657 ACTCATCATTTATCCTACATGGCA 57.808 37.500 0.00 0.00 35.26 4.92
617 642 6.712095 TCAACTCATCATTTATCCTACATGGC 59.288 38.462 0.00 0.00 35.26 4.40
618 643 8.681486 TTCAACTCATCATTTATCCTACATGG 57.319 34.615 0.00 0.00 37.10 3.66
619 644 8.781196 CCTTCAACTCATCATTTATCCTACATG 58.219 37.037 0.00 0.00 0.00 3.21
620 645 8.717717 TCCTTCAACTCATCATTTATCCTACAT 58.282 33.333 0.00 0.00 0.00 2.29
621 646 8.089625 TCCTTCAACTCATCATTTATCCTACA 57.910 34.615 0.00 0.00 0.00 2.74
622 647 8.424918 TCTCCTTCAACTCATCATTTATCCTAC 58.575 37.037 0.00 0.00 0.00 3.18
623 648 8.553085 TCTCCTTCAACTCATCATTTATCCTA 57.447 34.615 0.00 0.00 0.00 2.94
624 649 7.346698 TCTCTCCTTCAACTCATCATTTATCCT 59.653 37.037 0.00 0.00 0.00 3.24
625 650 7.504403 TCTCTCCTTCAACTCATCATTTATCC 58.496 38.462 0.00 0.00 0.00 2.59
626 651 8.420222 TCTCTCTCCTTCAACTCATCATTTATC 58.580 37.037 0.00 0.00 0.00 1.75
627 652 8.316497 TCTCTCTCCTTCAACTCATCATTTAT 57.684 34.615 0.00 0.00 0.00 1.40
628 653 7.724490 TCTCTCTCCTTCAACTCATCATTTA 57.276 36.000 0.00 0.00 0.00 1.40
629 654 6.617782 TCTCTCTCCTTCAACTCATCATTT 57.382 37.500 0.00 0.00 0.00 2.32
630 655 6.213195 AGTTCTCTCTCCTTCAACTCATCATT 59.787 38.462 0.00 0.00 0.00 2.57
631 656 5.721000 AGTTCTCTCTCCTTCAACTCATCAT 59.279 40.000 0.00 0.00 0.00 2.45
632 657 5.083122 AGTTCTCTCTCCTTCAACTCATCA 58.917 41.667 0.00 0.00 0.00 3.07
633 658 5.650543 GAGTTCTCTCTCCTTCAACTCATC 58.349 45.833 5.45 0.00 41.70 2.92
634 659 4.157656 CGAGTTCTCTCTCCTTCAACTCAT 59.842 45.833 9.98 0.00 42.03 2.90
635 660 3.504134 CGAGTTCTCTCTCCTTCAACTCA 59.496 47.826 9.98 0.00 42.03 3.41
636 661 3.504520 ACGAGTTCTCTCTCCTTCAACTC 59.495 47.826 0.00 0.00 39.65 3.01
637 662 3.492337 ACGAGTTCTCTCTCCTTCAACT 58.508 45.455 0.00 0.00 38.45 3.16
638 663 3.926821 ACGAGTTCTCTCTCCTTCAAC 57.073 47.619 0.00 0.00 38.45 3.18
639 664 5.314529 TCTTACGAGTTCTCTCTCCTTCAA 58.685 41.667 0.00 0.00 38.45 2.69
640 665 4.907809 TCTTACGAGTTCTCTCTCCTTCA 58.092 43.478 0.00 0.00 38.45 3.02
641 666 5.883503 TTCTTACGAGTTCTCTCTCCTTC 57.116 43.478 0.00 0.00 38.45 3.46
642 667 6.651975 TTTTCTTACGAGTTCTCTCTCCTT 57.348 37.500 0.00 0.00 38.45 3.36
643 668 6.209788 ACATTTTCTTACGAGTTCTCTCTCCT 59.790 38.462 0.00 0.00 38.45 3.69
644 669 6.391537 ACATTTTCTTACGAGTTCTCTCTCC 58.608 40.000 0.00 0.00 38.45 3.71
645 670 7.876896 AACATTTTCTTACGAGTTCTCTCTC 57.123 36.000 0.00 0.00 38.45 3.20
646 671 7.711339 ACAAACATTTTCTTACGAGTTCTCTCT 59.289 33.333 0.00 0.00 38.45 3.10
647 672 7.852516 ACAAACATTTTCTTACGAGTTCTCTC 58.147 34.615 0.00 0.00 37.35 3.20
648 673 7.711339 AGACAAACATTTTCTTACGAGTTCTCT 59.289 33.333 0.00 0.00 0.00 3.10
649 674 7.852516 AGACAAACATTTTCTTACGAGTTCTC 58.147 34.615 0.00 0.00 0.00 2.87
650 675 7.787725 AGACAAACATTTTCTTACGAGTTCT 57.212 32.000 0.00 0.00 0.00 3.01
651 676 8.336080 AGAAGACAAACATTTTCTTACGAGTTC 58.664 33.333 0.00 0.00 29.54 3.01
652 677 8.209917 AGAAGACAAACATTTTCTTACGAGTT 57.790 30.769 0.00 0.00 29.54 3.01
653 678 7.787725 AGAAGACAAACATTTTCTTACGAGT 57.212 32.000 0.00 0.00 29.54 4.18
654 679 9.503427 AAAAGAAGACAAACATTTTCTTACGAG 57.497 29.630 0.00 0.00 38.54 4.18
680 705 9.639563 AGATCATCTCTTGTCTTCTCTTACATA 57.360 33.333 0.00 0.00 0.00 2.29
681 706 8.537728 AGATCATCTCTTGTCTTCTCTTACAT 57.462 34.615 0.00 0.00 0.00 2.29
682 707 7.953005 AGATCATCTCTTGTCTTCTCTTACA 57.047 36.000 0.00 0.00 0.00 2.41
697 722 8.306038 AGACATATTGTGCTAAGAGATCATCTC 58.694 37.037 6.55 6.55 43.70 2.75
698 723 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
699 724 8.087136 TGAGACATATTGTGCTAAGAGATCATC 58.913 37.037 0.00 0.00 0.00 2.92
700 725 7.960262 TGAGACATATTGTGCTAAGAGATCAT 58.040 34.615 0.00 0.00 0.00 2.45
701 726 7.352079 TGAGACATATTGTGCTAAGAGATCA 57.648 36.000 0.00 0.00 0.00 2.92
702 727 8.087136 TGATGAGACATATTGTGCTAAGAGATC 58.913 37.037 0.00 0.00 0.00 2.75
703 728 7.871973 GTGATGAGACATATTGTGCTAAGAGAT 59.128 37.037 0.00 0.00 0.00 2.75
704 729 7.205992 GTGATGAGACATATTGTGCTAAGAGA 58.794 38.462 0.00 0.00 0.00 3.10
705 730 6.143598 CGTGATGAGACATATTGTGCTAAGAG 59.856 42.308 0.00 0.00 0.00 2.85
706 731 5.979517 CGTGATGAGACATATTGTGCTAAGA 59.020 40.000 0.00 0.00 0.00 2.10
707 732 5.750547 ACGTGATGAGACATATTGTGCTAAG 59.249 40.000 0.00 0.00 0.00 2.18
708 733 5.660460 ACGTGATGAGACATATTGTGCTAA 58.340 37.500 0.00 0.00 0.00 3.09
709 734 5.262588 ACGTGATGAGACATATTGTGCTA 57.737 39.130 0.00 0.00 0.00 3.49
710 735 4.128925 ACGTGATGAGACATATTGTGCT 57.871 40.909 0.00 0.00 0.00 4.40
711 736 4.864916 AACGTGATGAGACATATTGTGC 57.135 40.909 0.00 0.00 0.00 4.57
712 737 8.443160 ACTAAAAACGTGATGAGACATATTGTG 58.557 33.333 0.00 0.00 0.00 3.33
713 738 8.547967 ACTAAAAACGTGATGAGACATATTGT 57.452 30.769 0.00 0.00 0.00 2.71
791 816 9.781834 CCTTGCACGTAATTTAAAGATGATAAA 57.218 29.630 0.00 0.00 0.00 1.40
792 817 9.168451 TCCTTGCACGTAATTTAAAGATGATAA 57.832 29.630 0.00 0.00 0.00 1.75
793 818 8.725405 TCCTTGCACGTAATTTAAAGATGATA 57.275 30.769 0.00 0.00 0.00 2.15
794 819 7.624360 TCCTTGCACGTAATTTAAAGATGAT 57.376 32.000 0.00 0.00 0.00 2.45
795 820 7.624360 ATCCTTGCACGTAATTTAAAGATGA 57.376 32.000 0.00 0.00 0.00 2.92
796 821 9.438291 CTTATCCTTGCACGTAATTTAAAGATG 57.562 33.333 0.00 0.00 0.00 2.90
797 822 8.129211 GCTTATCCTTGCACGTAATTTAAAGAT 58.871 33.333 0.00 0.00 0.00 2.40
798 823 7.469260 GCTTATCCTTGCACGTAATTTAAAGA 58.531 34.615 0.00 0.00 0.00 2.52
799 824 6.410914 CGCTTATCCTTGCACGTAATTTAAAG 59.589 38.462 0.00 0.00 0.00 1.85
800 825 6.252281 CGCTTATCCTTGCACGTAATTTAAA 58.748 36.000 0.00 0.00 0.00 1.52
801 826 5.728344 GCGCTTATCCTTGCACGTAATTTAA 60.728 40.000 0.00 0.00 0.00 1.52
802 827 4.260456 GCGCTTATCCTTGCACGTAATTTA 60.260 41.667 0.00 0.00 0.00 1.40
803 828 3.486875 GCGCTTATCCTTGCACGTAATTT 60.487 43.478 0.00 0.00 0.00 1.82
804 829 2.031683 GCGCTTATCCTTGCACGTAATT 59.968 45.455 0.00 0.00 0.00 1.40
805 830 1.597663 GCGCTTATCCTTGCACGTAAT 59.402 47.619 0.00 0.00 0.00 1.89
806 831 1.003851 GCGCTTATCCTTGCACGTAA 58.996 50.000 0.00 0.00 0.00 3.18
807 832 0.808453 GGCGCTTATCCTTGCACGTA 60.808 55.000 7.64 0.00 0.00 3.57
808 833 2.106683 GGCGCTTATCCTTGCACGT 61.107 57.895 7.64 0.00 0.00 4.49
809 834 2.709475 GGCGCTTATCCTTGCACG 59.291 61.111 7.64 0.00 0.00 5.34
810 835 2.823829 CGGGCGCTTATCCTTGCAC 61.824 63.158 7.64 0.00 0.00 4.57
811 836 2.513666 CGGGCGCTTATCCTTGCA 60.514 61.111 7.64 0.00 0.00 4.08
812 837 3.279875 CCGGGCGCTTATCCTTGC 61.280 66.667 7.64 0.00 0.00 4.01
813 838 2.180204 CACCGGGCGCTTATCCTTG 61.180 63.158 7.64 0.00 0.00 3.61
814 839 2.189521 CACCGGGCGCTTATCCTT 59.810 61.111 7.64 0.00 0.00 3.36
815 840 3.861797 CCACCGGGCGCTTATCCT 61.862 66.667 7.64 0.00 0.00 3.24
816 841 3.809374 CTCCACCGGGCGCTTATCC 62.809 68.421 7.64 0.00 0.00 2.59
817 842 2.280186 CTCCACCGGGCGCTTATC 60.280 66.667 7.64 0.00 0.00 1.75
818 843 4.547367 GCTCCACCGGGCGCTTAT 62.547 66.667 7.64 0.00 41.77 1.73
882 908 5.163374 TGCATATCAGATTATCAGGCGCTAT 60.163 40.000 7.64 1.12 0.00 2.97
897 923 5.527214 TGGGAATTTTACGTCTGCATATCAG 59.473 40.000 0.00 0.00 44.21 2.90
898 924 5.295787 GTGGGAATTTTACGTCTGCATATCA 59.704 40.000 0.00 0.00 0.00 2.15
899 925 5.295787 TGTGGGAATTTTACGTCTGCATATC 59.704 40.000 0.00 0.00 0.00 1.63
900 926 5.189928 TGTGGGAATTTTACGTCTGCATAT 58.810 37.500 0.00 0.00 0.00 1.78
901 927 4.580868 TGTGGGAATTTTACGTCTGCATA 58.419 39.130 0.00 0.00 0.00 3.14
1154 1182 2.588877 GGATGTCACCGGCGATGG 60.589 66.667 9.30 0.00 0.00 3.51
1383 1411 2.702788 CGCAGATGCATTGCCACCA 61.703 57.895 20.70 0.00 42.21 4.17
1460 1488 0.810648 GCAATCGGCATGAACAGGAA 59.189 50.000 0.00 0.00 43.97 3.36
1789 2010 1.134220 ACGTGGCTTTCAAGGAAGTGA 60.134 47.619 0.00 0.00 0.00 3.41
1944 2165 9.559732 TGATGCTACTATTGCAGTACATAAATT 57.440 29.630 0.00 0.00 44.04 1.82
1961 2182 5.423015 CAAACTATGTCCACTGATGCTACT 58.577 41.667 0.00 0.00 0.00 2.57
2056 2277 2.486982 CAGGAGGCATGTTCAAGTTGAG 59.513 50.000 5.56 0.00 0.00 3.02
2184 2406 2.653234 AGCATGTCATTCCCCTCATC 57.347 50.000 0.00 0.00 0.00 2.92
2286 2508 6.510000 TCACTATACACTATATAGGGGTGGGA 59.490 42.308 16.40 6.77 33.04 4.37
2312 2534 1.066716 TCAGTAATTGGGGTTCGGTCG 60.067 52.381 0.00 0.00 0.00 4.79
2318 2540 5.820947 GTCGACATAATCAGTAATTGGGGTT 59.179 40.000 11.55 0.00 0.00 4.11
2506 2728 2.046023 CAGGACATCCGCCAGCAA 60.046 61.111 0.00 0.00 42.08 3.91
2551 2773 0.590195 CAAGGCAATAGGAGCATCGC 59.410 55.000 0.00 0.00 34.37 4.58
2677 2900 3.056322 TCCGTAACAGAGGTCCTTAAAGC 60.056 47.826 0.00 0.00 0.00 3.51
2687 2910 4.503007 CACGTCAAATATCCGTAACAGAGG 59.497 45.833 0.00 0.00 32.81 3.69
2780 3018 3.059352 ACTCACAAAGGTGCCACTATC 57.941 47.619 0.00 0.00 44.87 2.08
2788 3026 2.104111 TGTGGACCTACTCACAAAGGTG 59.896 50.000 0.00 0.00 46.22 4.00
2865 3103 1.600023 TTGCCCAAGTGTTACTTCCG 58.400 50.000 0.00 0.00 36.03 4.30
2898 3137 5.867716 GTCGTCTGCTTATCCTTCAACTAAA 59.132 40.000 0.00 0.00 0.00 1.85
2935 3174 4.749099 GCATCAGTCAAGCCTCTGTTATAG 59.251 45.833 0.00 0.00 33.89 1.31
2997 3236 5.183713 TGTTTGAAATGATTAGCAGGTCAGG 59.816 40.000 0.00 0.00 0.00 3.86
3099 3344 2.294512 CTGAGCAACCCTTTCTCCAAAC 59.705 50.000 0.00 0.00 0.00 2.93
3235 3481 6.401394 CCAGAACATCACAAGAGATCAAGTA 58.599 40.000 0.00 0.00 0.00 2.24
3261 3507 4.705507 GGGGAGGGAAGTTAGTTCAAATTC 59.294 45.833 2.03 0.00 39.86 2.17
3264 3510 3.057586 TGGGGAGGGAAGTTAGTTCAAA 58.942 45.455 2.03 0.00 36.82 2.69
3544 3917 5.077564 ACATCATGGATATGAAAGCATGCT 58.922 37.500 16.30 16.30 45.82 3.79
3779 4153 6.340962 TCAAGATCAACTCTTCTTTCCGTA 57.659 37.500 0.00 0.00 42.48 4.02
3794 4168 5.633927 CGCAAGAAATTGTCATCAAGATCA 58.366 37.500 0.00 0.00 43.02 2.92
3799 4173 3.639716 TGCGCAAGAAATTGTCATCAA 57.360 38.095 8.16 0.00 43.02 2.57
3840 4214 4.218312 GGAGGGAGTATTTAGGAACGGTA 58.782 47.826 0.00 0.00 0.00 4.02
3841 4215 3.036819 GGAGGGAGTATTTAGGAACGGT 58.963 50.000 0.00 0.00 0.00 4.83
3842 4216 2.035576 CGGAGGGAGTATTTAGGAACGG 59.964 54.545 0.00 0.00 0.00 4.44
3843 4217 2.692041 ACGGAGGGAGTATTTAGGAACG 59.308 50.000 0.00 0.00 0.00 3.95
3844 4218 3.069300 GGACGGAGGGAGTATTTAGGAAC 59.931 52.174 0.00 0.00 0.00 3.62
3845 4219 3.303049 GGACGGAGGGAGTATTTAGGAA 58.697 50.000 0.00 0.00 0.00 3.36
3846 4220 2.750807 CGGACGGAGGGAGTATTTAGGA 60.751 54.545 0.00 0.00 0.00 2.94
3847 4221 1.612463 CGGACGGAGGGAGTATTTAGG 59.388 57.143 0.00 0.00 0.00 2.69
3848 4222 1.612463 CCGGACGGAGGGAGTATTTAG 59.388 57.143 4.40 0.00 37.50 1.85
3849 4223 1.215173 TCCGGACGGAGGGAGTATTTA 59.785 52.381 9.76 0.00 39.76 1.40
3850 4224 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.000 9.76 0.00 39.76 1.40
3851 4225 0.032813 TTCCGGACGGAGGGAGTATT 60.033 55.000 13.64 0.00 46.06 1.89
3852 4226 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
3853 4227 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3854 4228 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3855 4229 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3856 4230 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3857 4231 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
3858 4232 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30
3859 4233 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
3860 4234 0.734889 GACGAGTATTTCCGGACGGA 59.265 55.000 1.83 9.76 43.52 4.69
3861 4235 0.452987 TGACGAGTATTTCCGGACGG 59.547 55.000 1.83 3.96 0.00 4.79
3862 4236 2.486951 ATGACGAGTATTTCCGGACG 57.513 50.000 1.83 5.89 0.00 4.79
3863 4237 3.777478 TCAATGACGAGTATTTCCGGAC 58.223 45.455 1.83 0.00 0.00 4.79
3864 4238 4.459390 TTCAATGACGAGTATTTCCGGA 57.541 40.909 0.00 0.00 0.00 5.14
3865 4239 5.293324 TCATTTCAATGACGAGTATTTCCGG 59.707 40.000 0.00 0.00 40.32 5.14
3866 4240 6.344572 TCATTTCAATGACGAGTATTTCCG 57.655 37.500 0.00 0.00 40.32 4.30
3867 4241 8.184192 ACATTCATTTCAATGACGAGTATTTCC 58.816 33.333 1.52 0.00 44.54 3.13
3871 4245 9.770097 AGATACATTCATTTCAATGACGAGTAT 57.230 29.630 14.51 14.51 44.54 2.12
3873 4247 9.254133 CTAGATACATTCATTTCAATGACGAGT 57.746 33.333 1.52 4.38 44.54 4.18
3874 4248 9.468532 TCTAGATACATTCATTTCAATGACGAG 57.531 33.333 1.52 0.00 44.54 4.18
3875 4249 9.987272 ATCTAGATACATTCATTTCAATGACGA 57.013 29.630 2.53 0.00 44.54 4.20
3909 4283 9.857656 ATGATGAAAATGGATGTATCTACAACT 57.142 29.630 0.00 0.00 39.99 3.16
3931 4305 6.017934 CCGGAAATACTCGTCATCAAAATGAT 60.018 38.462 0.00 0.00 43.62 2.45
3932 4306 5.293324 CCGGAAATACTCGTCATCAAAATGA 59.707 40.000 0.00 0.00 39.63 2.57
3933 4307 5.293324 TCCGGAAATACTCGTCATCAAAATG 59.707 40.000 0.00 0.00 0.00 2.32
3934 4308 5.293569 GTCCGGAAATACTCGTCATCAAAAT 59.706 40.000 5.23 0.00 0.00 1.82
3935 4309 4.628333 GTCCGGAAATACTCGTCATCAAAA 59.372 41.667 5.23 0.00 0.00 2.44
3936 4310 4.178540 GTCCGGAAATACTCGTCATCAAA 58.821 43.478 5.23 0.00 0.00 2.69
3937 4311 3.732774 CGTCCGGAAATACTCGTCATCAA 60.733 47.826 5.23 0.00 0.00 2.57
3938 4312 2.223409 CGTCCGGAAATACTCGTCATCA 60.223 50.000 5.23 0.00 0.00 3.07
3939 4313 2.382519 CGTCCGGAAATACTCGTCATC 58.617 52.381 5.23 0.00 0.00 2.92
3940 4314 1.066605 CCGTCCGGAAATACTCGTCAT 59.933 52.381 5.23 0.00 37.50 3.06
3941 4315 0.452987 CCGTCCGGAAATACTCGTCA 59.547 55.000 5.23 0.00 37.50 4.35
3942 4316 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
3943 4317 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
3944 4318 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
3945 4319 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
3946 4320 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3947 4321 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3948 4322 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3949 4323 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3950 4324 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
3951 4325 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
3952 4326 0.846015 TTATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
3953 4327 1.245732 CTTATACTCCCTCCGTCCGG 58.754 60.000 0.00 0.00 0.00 5.14
3954 4328 1.878734 GACTTATACTCCCTCCGTCCG 59.121 57.143 0.00 0.00 0.00 4.79
3955 4329 3.226682 AGACTTATACTCCCTCCGTCC 57.773 52.381 0.00 0.00 0.00 4.79
3956 4330 4.888823 AGAAAGACTTATACTCCCTCCGTC 59.111 45.833 0.00 0.00 0.00 4.79
3957 4331 4.869451 AGAAAGACTTATACTCCCTCCGT 58.131 43.478 0.00 0.00 0.00 4.69
3958 4332 6.297582 TCTAGAAAGACTTATACTCCCTCCG 58.702 44.000 0.00 0.00 0.00 4.63
3959 4333 7.519927 TCTCTAGAAAGACTTATACTCCCTCC 58.480 42.308 0.00 0.00 0.00 4.30
3960 4334 9.582648 AATCTCTAGAAAGACTTATACTCCCTC 57.417 37.037 0.00 0.00 0.00 4.30
3961 4335 9.945633 AAATCTCTAGAAAGACTTATACTCCCT 57.054 33.333 0.00 0.00 0.00 4.20
3970 4344 9.261035 TCCATAGTGAAATCTCTAGAAAGACTT 57.739 33.333 0.00 0.00 0.00 3.01
3971 4345 8.691797 GTCCATAGTGAAATCTCTAGAAAGACT 58.308 37.037 0.00 0.00 0.00 3.24
3972 4346 8.691797 AGTCCATAGTGAAATCTCTAGAAAGAC 58.308 37.037 0.00 0.00 0.00 3.01
3973 4347 8.830915 AGTCCATAGTGAAATCTCTAGAAAGA 57.169 34.615 0.00 0.00 0.00 2.52
3974 4348 9.959749 GTAGTCCATAGTGAAATCTCTAGAAAG 57.040 37.037 0.00 0.00 0.00 2.62
3975 4349 9.475620 TGTAGTCCATAGTGAAATCTCTAGAAA 57.524 33.333 0.00 0.00 0.00 2.52
3976 4350 9.647918 ATGTAGTCCATAGTGAAATCTCTAGAA 57.352 33.333 0.00 0.00 29.82 2.10
3979 4353 9.000486 CGTATGTAGTCCATAGTGAAATCTCTA 58.000 37.037 0.00 0.00 36.71 2.43
3980 4354 7.040340 CCGTATGTAGTCCATAGTGAAATCTCT 60.040 40.741 0.00 0.00 36.71 3.10
3981 4355 7.040617 TCCGTATGTAGTCCATAGTGAAATCTC 60.041 40.741 0.00 0.00 36.71 2.75
3982 4356 6.776116 TCCGTATGTAGTCCATAGTGAAATCT 59.224 38.462 0.00 0.00 36.71 2.40
3983 4357 6.978338 TCCGTATGTAGTCCATAGTGAAATC 58.022 40.000 0.00 0.00 36.71 2.17
3984 4358 6.971726 TCCGTATGTAGTCCATAGTGAAAT 57.028 37.500 0.00 0.00 36.71 2.17
3985 4359 6.322969 ACATCCGTATGTAGTCCATAGTGAAA 59.677 38.462 0.00 0.00 44.66 2.69
3986 4360 5.831525 ACATCCGTATGTAGTCCATAGTGAA 59.168 40.000 0.00 0.00 44.66 3.18
3987 4361 5.382616 ACATCCGTATGTAGTCCATAGTGA 58.617 41.667 0.00 0.00 44.66 3.41
3988 4362 5.707242 ACATCCGTATGTAGTCCATAGTG 57.293 43.478 0.00 0.00 44.66 2.74
4001 4375 7.502120 AAACTACGTCTACATACATCCGTAT 57.498 36.000 0.00 0.00 38.96 3.06
4002 4376 6.925610 AAACTACGTCTACATACATCCGTA 57.074 37.500 0.00 0.00 0.00 4.02
4003 4377 5.824904 AAACTACGTCTACATACATCCGT 57.175 39.130 0.00 0.00 0.00 4.69
4004 4378 7.042187 ACTCTAAACTACGTCTACATACATCCG 60.042 40.741 0.00 0.00 0.00 4.18
4005 4379 8.068977 CACTCTAAACTACGTCTACATACATCC 58.931 40.741 0.00 0.00 0.00 3.51
4006 4380 8.610896 ACACTCTAAACTACGTCTACATACATC 58.389 37.037 0.00 0.00 0.00 3.06
4007 4381 8.503458 ACACTCTAAACTACGTCTACATACAT 57.497 34.615 0.00 0.00 0.00 2.29
4008 4382 7.912056 ACACTCTAAACTACGTCTACATACA 57.088 36.000 0.00 0.00 0.00 2.29
4012 4386 9.831737 GAATTTACACTCTAAACTACGTCTACA 57.168 33.333 0.00 0.00 0.00 2.74
4013 4387 9.831737 TGAATTTACACTCTAAACTACGTCTAC 57.168 33.333 0.00 0.00 0.00 2.59
4014 4388 9.831737 GTGAATTTACACTCTAAACTACGTCTA 57.168 33.333 0.00 0.00 37.73 2.59
4015 4389 8.574737 AGTGAATTTACACTCTAAACTACGTCT 58.425 33.333 2.93 0.00 46.36 4.18
4016 4390 8.739649 AGTGAATTTACACTCTAAACTACGTC 57.260 34.615 2.93 0.00 46.36 4.34
4029 4403 6.636850 ACGAAGCAAAATGAGTGAATTTACAC 59.363 34.615 2.93 0.00 40.60 2.90
4030 4404 6.734137 ACGAAGCAAAATGAGTGAATTTACA 58.266 32.000 2.93 0.00 0.00 2.41
4031 4405 8.788813 CATACGAAGCAAAATGAGTGAATTTAC 58.211 33.333 0.00 0.00 0.00 2.01
4032 4406 8.511321 ACATACGAAGCAAAATGAGTGAATTTA 58.489 29.630 0.00 0.00 0.00 1.40
4033 4407 7.370383 ACATACGAAGCAAAATGAGTGAATTT 58.630 30.769 0.00 0.00 0.00 1.82
4034 4408 6.913170 ACATACGAAGCAAAATGAGTGAATT 58.087 32.000 0.00 0.00 0.00 2.17
4035 4409 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
4036 4410 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
4037 4411 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
4038 4412 6.311445 AGACTACATACGAAGCAAAATGAGTG 59.689 38.462 0.00 0.00 0.00 3.51
4039 4413 6.398918 AGACTACATACGAAGCAAAATGAGT 58.601 36.000 0.00 0.00 0.00 3.41
4040 4414 6.754209 AGAGACTACATACGAAGCAAAATGAG 59.246 38.462 0.00 0.00 0.00 2.90
4041 4415 6.631016 AGAGACTACATACGAAGCAAAATGA 58.369 36.000 0.00 0.00 0.00 2.57
4042 4416 6.893958 AGAGACTACATACGAAGCAAAATG 57.106 37.500 0.00 0.00 0.00 2.32
4043 4417 9.601217 AATAAGAGACTACATACGAAGCAAAAT 57.399 29.630 0.00 0.00 0.00 1.82
4044 4418 8.869897 CAATAAGAGACTACATACGAAGCAAAA 58.130 33.333 0.00 0.00 0.00 2.44
4045 4419 7.491372 CCAATAAGAGACTACATACGAAGCAAA 59.509 37.037 0.00 0.00 0.00 3.68
4046 4420 6.978659 CCAATAAGAGACTACATACGAAGCAA 59.021 38.462 0.00 0.00 0.00 3.91
4047 4421 6.320418 TCCAATAAGAGACTACATACGAAGCA 59.680 38.462 0.00 0.00 0.00 3.91
4048 4422 6.736123 TCCAATAAGAGACTACATACGAAGC 58.264 40.000 0.00 0.00 0.00 3.86
4049 4423 9.400638 GATTCCAATAAGAGACTACATACGAAG 57.599 37.037 0.00 0.00 0.00 3.79
4050 4424 8.358148 GGATTCCAATAAGAGACTACATACGAA 58.642 37.037 0.00 0.00 0.00 3.85
4051 4425 7.039923 GGGATTCCAATAAGAGACTACATACGA 60.040 40.741 4.80 0.00 0.00 3.43
4052 4426 7.039644 AGGGATTCCAATAAGAGACTACATACG 60.040 40.741 4.80 0.00 34.83 3.06
4053 4427 8.196378 AGGGATTCCAATAAGAGACTACATAC 57.804 38.462 4.80 0.00 34.83 2.39
4054 4428 9.892444 TTAGGGATTCCAATAAGAGACTACATA 57.108 33.333 4.80 0.00 34.83 2.29
4055 4429 8.798975 TTAGGGATTCCAATAAGAGACTACAT 57.201 34.615 4.80 0.00 34.83 2.29
4056 4430 8.618240 TTTAGGGATTCCAATAAGAGACTACA 57.382 34.615 4.80 0.00 34.83 2.74
4057 4431 9.901172 TTTTTAGGGATTCCAATAAGAGACTAC 57.099 33.333 4.80 0.00 34.83 2.73
4059 4433 8.836735 TCTTTTTAGGGATTCCAATAAGAGACT 58.163 33.333 4.80 0.00 34.83 3.24
4060 4434 8.894731 GTCTTTTTAGGGATTCCAATAAGAGAC 58.105 37.037 17.73 17.73 30.53 3.36
4061 4435 8.053355 GGTCTTTTTAGGGATTCCAATAAGAGA 58.947 37.037 4.80 7.64 30.53 3.10
4062 4436 8.055790 AGGTCTTTTTAGGGATTCCAATAAGAG 58.944 37.037 4.80 5.80 30.53 2.85
4063 4437 7.939781 AGGTCTTTTTAGGGATTCCAATAAGA 58.060 34.615 4.80 5.07 34.83 2.10
4064 4438 9.868160 ATAGGTCTTTTTAGGGATTCCAATAAG 57.132 33.333 4.80 2.91 34.83 1.73
4087 4461 9.535170 TGATACTCCCTCTGTTCCTAAATATAG 57.465 37.037 0.00 0.00 0.00 1.31
4088 4462 9.535170 CTGATACTCCCTCTGTTCCTAAATATA 57.465 37.037 0.00 0.00 0.00 0.86
4089 4463 8.235230 TCTGATACTCCCTCTGTTCCTAAATAT 58.765 37.037 0.00 0.00 0.00 1.28
4090 4464 7.592736 TCTGATACTCCCTCTGTTCCTAAATA 58.407 38.462 0.00 0.00 0.00 1.40
4091 4465 6.444704 TCTGATACTCCCTCTGTTCCTAAAT 58.555 40.000 0.00 0.00 0.00 1.40
4092 4466 5.838955 TCTGATACTCCCTCTGTTCCTAAA 58.161 41.667 0.00 0.00 0.00 1.85
4093 4467 5.467668 TCTGATACTCCCTCTGTTCCTAA 57.532 43.478 0.00 0.00 0.00 2.69
4094 4468 5.671463 ATCTGATACTCCCTCTGTTCCTA 57.329 43.478 0.00 0.00 0.00 2.94
4095 4469 4.551215 ATCTGATACTCCCTCTGTTCCT 57.449 45.455 0.00 0.00 0.00 3.36
4096 4470 5.598830 TGTTATCTGATACTCCCTCTGTTCC 59.401 44.000 0.00 0.00 0.00 3.62
4097 4471 6.096987 TGTGTTATCTGATACTCCCTCTGTTC 59.903 42.308 0.00 0.00 0.00 3.18
4098 4472 5.958380 TGTGTTATCTGATACTCCCTCTGTT 59.042 40.000 0.00 0.00 0.00 3.16
4099 4473 5.519808 TGTGTTATCTGATACTCCCTCTGT 58.480 41.667 0.00 0.00 0.00 3.41
4100 4474 6.662865 ATGTGTTATCTGATACTCCCTCTG 57.337 41.667 0.00 0.00 0.00 3.35
4101 4475 7.682787 AAATGTGTTATCTGATACTCCCTCT 57.317 36.000 0.00 0.00 0.00 3.69
4102 4476 7.770897 ACAAAATGTGTTATCTGATACTCCCTC 59.229 37.037 0.00 0.00 37.01 4.30
4103 4477 7.633789 ACAAAATGTGTTATCTGATACTCCCT 58.366 34.615 0.00 0.00 37.01 4.20
4104 4478 7.865706 ACAAAATGTGTTATCTGATACTCCC 57.134 36.000 0.00 0.00 37.01 4.30
4206 4580 5.989477 TCTCCCACATTCTAATAACACCAG 58.011 41.667 0.00 0.00 0.00 4.00
4213 4587 6.057533 CAGCACAATCTCCCACATTCTAATA 58.942 40.000 0.00 0.00 0.00 0.98
4246 4620 3.947834 CCGCTATTCATCAGGAAAAAGGT 59.052 43.478 0.00 0.00 39.39 3.50
4274 4648 8.902540 AAGAATATTCCAGCGTGTATATTCAA 57.097 30.769 19.74 0.00 40.18 2.69
4316 4690 2.659757 CTGCACAGCAAATCACAAATCG 59.340 45.455 0.00 0.00 38.41 3.34
4334 4708 6.640092 GGTACTATCGTGTAATTAACTCCTGC 59.360 42.308 0.00 0.00 0.00 4.85
4952 5326 1.065636 CAAGCCTCTCAGATGCCTTGA 60.066 52.381 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.