Multiple sequence alignment - TraesCS4B01G157100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G157100 | chr4B | 100.000 | 4887 | 0 | 0 | 1 | 4887 | 295044257 | 295049143 | 0.000000e+00 | 9025.0 |
1 | TraesCS4B01G157100 | chr4B | 97.297 | 148 | 3 | 1 | 2777 | 2923 | 604279638 | 604279785 | 2.920000e-62 | 250.0 |
2 | TraesCS4B01G157100 | chr4B | 97.500 | 40 | 1 | 0 | 4731 | 4770 | 74024862 | 74024823 | 8.780000e-08 | 69.4 |
3 | TraesCS4B01G157100 | chr4B | 95.349 | 43 | 2 | 0 | 4728 | 4770 | 149807693 | 149807735 | 8.780000e-08 | 69.4 |
4 | TraesCS4B01G157100 | chr4B | 97.500 | 40 | 1 | 0 | 4731 | 4770 | 302043371 | 302043332 | 8.780000e-08 | 69.4 |
5 | TraesCS4B01G157100 | chr4D | 93.948 | 1801 | 52 | 23 | 2912 | 4689 | 265373983 | 265375749 | 0.000000e+00 | 2669.0 |
6 | TraesCS4B01G157100 | chr4D | 96.529 | 1383 | 36 | 4 | 1403 | 2776 | 265372621 | 265374000 | 0.000000e+00 | 2278.0 |
7 | TraesCS4B01G157100 | chr4D | 82.060 | 903 | 93 | 30 | 1 | 881 | 7137204 | 7138059 | 0.000000e+00 | 706.0 |
8 | TraesCS4B01G157100 | chr4D | 95.677 | 347 | 9 | 1 | 967 | 1313 | 265372283 | 265372623 | 1.990000e-153 | 553.0 |
9 | TraesCS4B01G157100 | chr4D | 90.500 | 200 | 14 | 3 | 4690 | 4887 | 265375707 | 265375903 | 4.850000e-65 | 259.0 |
10 | TraesCS4B01G157100 | chr4A | 96.352 | 1069 | 32 | 4 | 1709 | 2776 | 245258107 | 245259169 | 0.000000e+00 | 1751.0 |
11 | TraesCS4B01G157100 | chr4A | 96.593 | 675 | 23 | 0 | 3357 | 4031 | 245259913 | 245260587 | 0.000000e+00 | 1120.0 |
12 | TraesCS4B01G157100 | chr4A | 94.144 | 444 | 22 | 3 | 2912 | 3353 | 245259152 | 245259593 | 0.000000e+00 | 673.0 |
13 | TraesCS4B01G157100 | chr4A | 93.533 | 433 | 20 | 5 | 884 | 1313 | 245257177 | 245257604 | 5.330000e-179 | 638.0 |
14 | TraesCS4B01G157100 | chr4A | 87.432 | 549 | 39 | 8 | 4028 | 4573 | 245275110 | 245275631 | 5.410000e-169 | 604.0 |
15 | TraesCS4B01G157100 | chr4A | 93.312 | 314 | 19 | 1 | 1405 | 1716 | 245257607 | 245257920 | 3.450000e-126 | 462.0 |
16 | TraesCS4B01G157100 | chr4A | 89.105 | 257 | 22 | 6 | 334 | 586 | 708282659 | 708282405 | 1.020000e-81 | 315.0 |
17 | TraesCS4B01G157100 | chr4A | 98.601 | 143 | 2 | 0 | 2777 | 2919 | 189612718 | 189612576 | 2.260000e-63 | 254.0 |
18 | TraesCS4B01G157100 | chr4A | 82.286 | 175 | 30 | 1 | 4515 | 4688 | 539147549 | 539147375 | 3.050000e-32 | 150.0 |
19 | TraesCS4B01G157100 | chr4A | 100.000 | 40 | 0 | 0 | 3316 | 3355 | 245259587 | 245259626 | 1.890000e-09 | 75.0 |
20 | TraesCS4B01G157100 | chr4A | 97.500 | 40 | 1 | 0 | 4731 | 4770 | 732922037 | 732921998 | 8.780000e-08 | 69.4 |
21 | TraesCS4B01G157100 | chr4A | 100.000 | 29 | 0 | 0 | 852 | 880 | 174807951 | 174807923 | 2.000000e-03 | 54.7 |
22 | TraesCS4B01G157100 | chr5A | 96.459 | 706 | 25 | 0 | 2071 | 2776 | 488891281 | 488891986 | 0.000000e+00 | 1166.0 |
23 | TraesCS4B01G157100 | chr5A | 96.593 | 675 | 23 | 0 | 3357 | 4031 | 488892731 | 488893405 | 0.000000e+00 | 1120.0 |
24 | TraesCS4B01G157100 | chr5A | 94.737 | 608 | 24 | 4 | 1405 | 2010 | 488890681 | 488891282 | 0.000000e+00 | 939.0 |
25 | TraesCS4B01G157100 | chr5A | 93.919 | 444 | 23 | 3 | 2912 | 3353 | 488891969 | 488892410 | 0.000000e+00 | 667.0 |
26 | TraesCS4B01G157100 | chr5A | 92.711 | 439 | 18 | 5 | 884 | 1313 | 488890245 | 488890678 | 5.370000e-174 | 621.0 |
27 | TraesCS4B01G157100 | chr5A | 87.614 | 549 | 37 | 8 | 4028 | 4573 | 488898106 | 488898626 | 4.180000e-170 | 608.0 |
28 | TraesCS4B01G157100 | chr5A | 82.955 | 176 | 27 | 3 | 4515 | 4688 | 606294749 | 606294923 | 6.550000e-34 | 156.0 |
29 | TraesCS4B01G157100 | chr5A | 100.000 | 40 | 0 | 0 | 3316 | 3355 | 488892404 | 488892443 | 1.890000e-09 | 75.0 |
30 | TraesCS4B01G157100 | chr5A | 91.837 | 49 | 2 | 1 | 4731 | 4779 | 419649503 | 419649457 | 3.160000e-07 | 67.6 |
31 | TraesCS4B01G157100 | chr1B | 88.023 | 885 | 65 | 14 | 1 | 881 | 112860678 | 112861525 | 0.000000e+00 | 1009.0 |
32 | TraesCS4B01G157100 | chr1B | 92.593 | 54 | 3 | 1 | 828 | 881 | 544443598 | 544443546 | 5.250000e-10 | 76.8 |
33 | TraesCS4B01G157100 | chr1B | 95.349 | 43 | 2 | 0 | 4728 | 4770 | 178580049 | 178580091 | 8.780000e-08 | 69.4 |
34 | TraesCS4B01G157100 | chr3B | 85.923 | 888 | 99 | 20 | 1 | 881 | 662808322 | 662807454 | 0.000000e+00 | 924.0 |
35 | TraesCS4B01G157100 | chr3B | 89.081 | 577 | 49 | 4 | 2 | 564 | 696742108 | 696741532 | 0.000000e+00 | 704.0 |
36 | TraesCS4B01G157100 | chr3B | 96.667 | 150 | 4 | 1 | 2772 | 2920 | 145682431 | 145682282 | 1.050000e-61 | 248.0 |
37 | TraesCS4B01G157100 | chr3B | 89.916 | 119 | 10 | 1 | 4771 | 4887 | 250753378 | 250753260 | 8.470000e-33 | 152.0 |
38 | TraesCS4B01G157100 | chr7D | 84.590 | 902 | 77 | 35 | 1 | 880 | 46540703 | 46539842 | 0.000000e+00 | 839.0 |
39 | TraesCS4B01G157100 | chr7D | 82.022 | 890 | 98 | 37 | 1 | 880 | 489294277 | 489293440 | 0.000000e+00 | 701.0 |
40 | TraesCS4B01G157100 | chr7D | 82.942 | 809 | 91 | 17 | 89 | 880 | 121802927 | 121802149 | 0.000000e+00 | 686.0 |
41 | TraesCS4B01G157100 | chr7D | 93.458 | 107 | 7 | 0 | 1301 | 1407 | 1943703 | 1943597 | 5.060000e-35 | 159.0 |
42 | TraesCS4B01G157100 | chr7D | 91.304 | 115 | 8 | 1 | 4775 | 4887 | 326060688 | 326060574 | 6.550000e-34 | 156.0 |
43 | TraesCS4B01G157100 | chr7D | 88.710 | 124 | 10 | 2 | 4768 | 4887 | 364852565 | 364852442 | 1.100000e-31 | 148.0 |
44 | TraesCS4B01G157100 | chr7D | 81.169 | 154 | 23 | 6 | 4480 | 4631 | 607533982 | 607534131 | 8.590000e-23 | 119.0 |
45 | TraesCS4B01G157100 | chr6B | 84.520 | 885 | 95 | 20 | 1 | 880 | 522677535 | 522678382 | 0.000000e+00 | 837.0 |
46 | TraesCS4B01G157100 | chr6B | 93.458 | 107 | 6 | 1 | 1306 | 1412 | 374852366 | 374852261 | 1.820000e-34 | 158.0 |
47 | TraesCS4B01G157100 | chr6B | 95.349 | 43 | 2 | 0 | 4728 | 4770 | 264329166 | 264329208 | 8.780000e-08 | 69.4 |
48 | TraesCS4B01G157100 | chr1D | 83.703 | 902 | 97 | 26 | 1 | 881 | 175814698 | 175815570 | 0.000000e+00 | 806.0 |
49 | TraesCS4B01G157100 | chr1D | 88.186 | 601 | 47 | 13 | 1 | 586 | 318152821 | 318152230 | 0.000000e+00 | 695.0 |
50 | TraesCS4B01G157100 | chr1D | 88.328 | 574 | 43 | 8 | 1 | 551 | 335018122 | 335017550 | 0.000000e+00 | 667.0 |
51 | TraesCS4B01G157100 | chr1D | 99.306 | 144 | 1 | 0 | 2777 | 2920 | 235669449 | 235669306 | 1.350000e-65 | 261.0 |
52 | TraesCS4B01G157100 | chr1D | 97.315 | 149 | 4 | 0 | 2777 | 2925 | 370641922 | 370642070 | 2.260000e-63 | 254.0 |
53 | TraesCS4B01G157100 | chr1D | 97.931 | 145 | 3 | 0 | 2777 | 2921 | 235664843 | 235664699 | 8.120000e-63 | 252.0 |
54 | TraesCS4B01G157100 | chr1D | 96.575 | 146 | 4 | 1 | 2777 | 2921 | 332271 | 332126 | 1.760000e-59 | 241.0 |
55 | TraesCS4B01G157100 | chr1D | 78.261 | 184 | 35 | 5 | 4499 | 4680 | 78116812 | 78116632 | 4.000000e-21 | 113.0 |
56 | TraesCS4B01G157100 | chr2D | 83.630 | 898 | 87 | 21 | 1 | 880 | 368971344 | 368972199 | 0.000000e+00 | 789.0 |
57 | TraesCS4B01G157100 | chr2D | 89.344 | 122 | 11 | 1 | 4768 | 4887 | 298856216 | 298856095 | 8.470000e-33 | 152.0 |
58 | TraesCS4B01G157100 | chr3A | 82.425 | 899 | 107 | 29 | 2 | 880 | 709536753 | 709537620 | 0.000000e+00 | 737.0 |
59 | TraesCS4B01G157100 | chr3A | 81.061 | 924 | 99 | 36 | 2 | 880 | 709502333 | 709503225 | 0.000000e+00 | 667.0 |
60 | TraesCS4B01G157100 | chr3A | 79.762 | 168 | 30 | 3 | 4515 | 4680 | 49873001 | 49872836 | 8.590000e-23 | 119.0 |
61 | TraesCS4B01G157100 | chr3D | 88.300 | 547 | 46 | 12 | 1 | 541 | 75121562 | 75121028 | 1.480000e-179 | 640.0 |
62 | TraesCS4B01G157100 | chr3D | 86.018 | 565 | 58 | 11 | 1 | 551 | 104711253 | 104710696 | 1.960000e-163 | 586.0 |
63 | TraesCS4B01G157100 | chr2B | 83.402 | 729 | 74 | 19 | 174 | 884 | 102394174 | 102393475 | 2.480000e-177 | 632.0 |
64 | TraesCS4B01G157100 | chr2B | 93.578 | 109 | 7 | 0 | 1298 | 1406 | 127747401 | 127747509 | 3.910000e-36 | 163.0 |
65 | TraesCS4B01G157100 | chr2B | 91.525 | 118 | 8 | 2 | 1294 | 1411 | 695410839 | 695410954 | 1.410000e-35 | 161.0 |
66 | TraesCS4B01G157100 | chr2B | 91.525 | 118 | 8 | 2 | 1294 | 1411 | 695437525 | 695437640 | 1.410000e-35 | 161.0 |
67 | TraesCS4B01G157100 | chr2B | 95.098 | 102 | 5 | 0 | 1308 | 1409 | 774087955 | 774087854 | 1.410000e-35 | 161.0 |
68 | TraesCS4B01G157100 | chr2B | 92.035 | 113 | 7 | 2 | 1294 | 1406 | 12876055 | 12876165 | 1.820000e-34 | 158.0 |
69 | TraesCS4B01G157100 | chr2A | 97.973 | 148 | 2 | 1 | 2774 | 2920 | 95819240 | 95819387 | 6.280000e-64 | 255.0 |
70 | TraesCS4B01G157100 | chr2A | 93.519 | 108 | 5 | 2 | 1308 | 1415 | 619208130 | 619208025 | 5.060000e-35 | 159.0 |
71 | TraesCS4B01G157100 | chr5D | 97.931 | 145 | 2 | 1 | 2777 | 2920 | 378907909 | 378908053 | 2.920000e-62 | 250.0 |
72 | TraesCS4B01G157100 | chr5D | 89.344 | 122 | 9 | 3 | 4768 | 4887 | 66675263 | 66675144 | 3.050000e-32 | 150.0 |
73 | TraesCS4B01G157100 | chr7A | 84.000 | 175 | 27 | 1 | 4515 | 4688 | 5624981 | 5625155 | 3.030000e-37 | 167.0 |
74 | TraesCS4B01G157100 | chr7A | 83.429 | 175 | 28 | 1 | 4515 | 4688 | 609608766 | 609608592 | 1.410000e-35 | 161.0 |
75 | TraesCS4B01G157100 | chr7A | 97.500 | 40 | 1 | 0 | 4731 | 4770 | 416772178 | 416772139 | 8.780000e-08 | 69.4 |
76 | TraesCS4B01G157100 | chr6D | 90.984 | 122 | 7 | 2 | 4768 | 4887 | 158422515 | 158422396 | 1.410000e-35 | 161.0 |
77 | TraesCS4B01G157100 | chr6D | 89.344 | 122 | 9 | 2 | 4768 | 4887 | 126990963 | 126990844 | 3.050000e-32 | 150.0 |
78 | TraesCS4B01G157100 | chr6A | 95.050 | 101 | 5 | 0 | 1313 | 1413 | 6606449 | 6606349 | 5.060000e-35 | 159.0 |
79 | TraesCS4B01G157100 | chr5B | 89.344 | 122 | 11 | 1 | 4768 | 4887 | 285379565 | 285379444 | 8.470000e-33 | 152.0 |
80 | TraesCS4B01G157100 | chr7B | 78.443 | 167 | 32 | 3 | 4516 | 4680 | 659622736 | 659622900 | 6.690000e-19 | 106.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G157100 | chr4B | 295044257 | 295049143 | 4886 | False | 9025.000000 | 9025 | 100.000000 | 1 | 4887 | 1 | chr4B.!!$F2 | 4886 |
1 | TraesCS4B01G157100 | chr4D | 265372283 | 265375903 | 3620 | False | 1439.750000 | 2669 | 94.163500 | 967 | 4887 | 4 | chr4D.!!$F2 | 3920 |
2 | TraesCS4B01G157100 | chr4D | 7137204 | 7138059 | 855 | False | 706.000000 | 706 | 82.060000 | 1 | 881 | 1 | chr4D.!!$F1 | 880 |
3 | TraesCS4B01G157100 | chr4A | 245257177 | 245260587 | 3410 | False | 786.500000 | 1751 | 95.655667 | 884 | 4031 | 6 | chr4A.!!$F2 | 3147 |
4 | TraesCS4B01G157100 | chr4A | 245275110 | 245275631 | 521 | False | 604.000000 | 604 | 87.432000 | 4028 | 4573 | 1 | chr4A.!!$F1 | 545 |
5 | TraesCS4B01G157100 | chr5A | 488890245 | 488893405 | 3160 | False | 764.666667 | 1166 | 95.736500 | 884 | 4031 | 6 | chr5A.!!$F3 | 3147 |
6 | TraesCS4B01G157100 | chr5A | 488898106 | 488898626 | 520 | False | 608.000000 | 608 | 87.614000 | 4028 | 4573 | 1 | chr5A.!!$F1 | 545 |
7 | TraesCS4B01G157100 | chr1B | 112860678 | 112861525 | 847 | False | 1009.000000 | 1009 | 88.023000 | 1 | 881 | 1 | chr1B.!!$F1 | 880 |
8 | TraesCS4B01G157100 | chr3B | 662807454 | 662808322 | 868 | True | 924.000000 | 924 | 85.923000 | 1 | 881 | 1 | chr3B.!!$R3 | 880 |
9 | TraesCS4B01G157100 | chr3B | 696741532 | 696742108 | 576 | True | 704.000000 | 704 | 89.081000 | 2 | 564 | 1 | chr3B.!!$R4 | 562 |
10 | TraesCS4B01G157100 | chr7D | 46539842 | 46540703 | 861 | True | 839.000000 | 839 | 84.590000 | 1 | 880 | 1 | chr7D.!!$R2 | 879 |
11 | TraesCS4B01G157100 | chr7D | 489293440 | 489294277 | 837 | True | 701.000000 | 701 | 82.022000 | 1 | 880 | 1 | chr7D.!!$R6 | 879 |
12 | TraesCS4B01G157100 | chr7D | 121802149 | 121802927 | 778 | True | 686.000000 | 686 | 82.942000 | 89 | 880 | 1 | chr7D.!!$R3 | 791 |
13 | TraesCS4B01G157100 | chr6B | 522677535 | 522678382 | 847 | False | 837.000000 | 837 | 84.520000 | 1 | 880 | 1 | chr6B.!!$F2 | 879 |
14 | TraesCS4B01G157100 | chr1D | 175814698 | 175815570 | 872 | False | 806.000000 | 806 | 83.703000 | 1 | 881 | 1 | chr1D.!!$F1 | 880 |
15 | TraesCS4B01G157100 | chr1D | 318152230 | 318152821 | 591 | True | 695.000000 | 695 | 88.186000 | 1 | 586 | 1 | chr1D.!!$R5 | 585 |
16 | TraesCS4B01G157100 | chr1D | 335017550 | 335018122 | 572 | True | 667.000000 | 667 | 88.328000 | 1 | 551 | 1 | chr1D.!!$R6 | 550 |
17 | TraesCS4B01G157100 | chr2D | 368971344 | 368972199 | 855 | False | 789.000000 | 789 | 83.630000 | 1 | 880 | 1 | chr2D.!!$F1 | 879 |
18 | TraesCS4B01G157100 | chr3A | 709536753 | 709537620 | 867 | False | 737.000000 | 737 | 82.425000 | 2 | 880 | 1 | chr3A.!!$F2 | 878 |
19 | TraesCS4B01G157100 | chr3A | 709502333 | 709503225 | 892 | False | 667.000000 | 667 | 81.061000 | 2 | 880 | 1 | chr3A.!!$F1 | 878 |
20 | TraesCS4B01G157100 | chr3D | 75121028 | 75121562 | 534 | True | 640.000000 | 640 | 88.300000 | 1 | 541 | 1 | chr3D.!!$R1 | 540 |
21 | TraesCS4B01G157100 | chr3D | 104710696 | 104711253 | 557 | True | 586.000000 | 586 | 86.018000 | 1 | 551 | 1 | chr3D.!!$R2 | 550 |
22 | TraesCS4B01G157100 | chr2B | 102393475 | 102394174 | 699 | True | 632.000000 | 632 | 83.402000 | 174 | 884 | 1 | chr2B.!!$R1 | 710 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
777 | 871 | 0.037605 | GGTTGACTGACCCTACCGTG | 60.038 | 60.0 | 0.0 | 0.0 | 33.41 | 4.94 | F |
1325 | 1442 | 0.115745 | AAGTAGTCCCTCCGTCCCAA | 59.884 | 55.0 | 0.0 | 0.0 | 0.00 | 4.12 | F |
1326 | 1443 | 0.115745 | AGTAGTCCCTCCGTCCCAAA | 59.884 | 55.0 | 0.0 | 0.0 | 0.00 | 3.28 | F |
2625 | 2945 | 0.170561 | CTTGTGATGCCTGCTCTTGC | 59.829 | 55.0 | 0.0 | 0.0 | 40.20 | 4.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1920 | 2240 | 1.008449 | AGCATACCAGGTACCACTCCT | 59.992 | 52.381 | 15.94 | 0.00 | 35.45 | 3.69 | R |
2876 | 3197 | 0.466555 | TATTGTGTATTGGGCCCGCC | 60.467 | 55.000 | 19.37 | 4.97 | 0.00 | 6.13 | R |
2877 | 3198 | 1.269448 | CATATTGTGTATTGGGCCCGC | 59.731 | 52.381 | 19.37 | 7.95 | 0.00 | 6.13 | R |
3943 | 4582 | 0.391597 | TCGGAAGATGGCGGATTACC | 59.608 | 55.000 | 0.00 | 0.00 | 33.31 | 2.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
116 | 117 | 1.002430 | ACTTTGAGAGCAATGCGGAGA | 59.998 | 47.619 | 0.00 | 0.00 | 33.71 | 3.71 |
203 | 230 | 2.740580 | CGAAAACTATAGCGGGCAAGGA | 60.741 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
229 | 256 | 2.027625 | GAGTGCTTGAACGGTCGGG | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
246 | 273 | 4.980805 | GTGCCGACCAGCGTTCCA | 62.981 | 66.667 | 0.00 | 0.00 | 38.67 | 3.53 |
315 | 344 | 1.761198 | GGCCTAACATACGAGGAGGTT | 59.239 | 52.381 | 0.00 | 0.00 | 34.46 | 3.50 |
325 | 354 | 3.045601 | ACGAGGAGGTTTGAAGATGTG | 57.954 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
328 | 357 | 3.744660 | GAGGAGGTTTGAAGATGTGTGT | 58.255 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
336 | 386 | 1.067565 | TGAAGATGTGTGTCCGCTCTC | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
417 | 468 | 6.238538 | CGTTAGTTGGGTTGTCAAACTATGTT | 60.239 | 38.462 | 0.00 | 0.00 | 36.48 | 2.71 |
565 | 656 | 9.758651 | ACCTGTGATAAATTTTTACAAAAGACC | 57.241 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
566 | 657 | 9.981114 | CCTGTGATAAATTTTTACAAAAGACCT | 57.019 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
674 | 768 | 6.448207 | GTAGGATATCATAACCTACCGTCC | 57.552 | 45.833 | 16.96 | 0.00 | 45.85 | 4.79 |
679 | 773 | 3.377253 | TCATAACCTACCGTCCAGACT | 57.623 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
763 | 857 | 0.912487 | AACCCCTGGCGATAGGTTGA | 60.912 | 55.000 | 3.85 | 0.00 | 41.03 | 3.18 |
777 | 871 | 0.037605 | GGTTGACTGACCCTACCGTG | 60.038 | 60.000 | 0.00 | 0.00 | 33.41 | 4.94 |
804 | 898 | 0.620700 | ATGGCGGTAGGAGAAGGGTT | 60.621 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
806 | 900 | 1.197812 | GGCGGTAGGAGAAGGGTTAA | 58.802 | 55.000 | 0.00 | 0.00 | 0.00 | 2.01 |
881 | 984 | 7.386059 | AGGGTTAAAACATGAAATTTAGCCTG | 58.614 | 34.615 | 22.12 | 0.00 | 40.31 | 4.85 |
938 | 1041 | 9.620259 | ATCTTCTGTGGATAAAGGATAAGAAAC | 57.380 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
950 | 1059 | 3.120304 | GGATAAGAAACCTGCACACGAAC | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
952 | 1061 | 1.299541 | AGAAACCTGCACACGAACAG | 58.700 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1048 | 1163 | 1.551883 | TCCCTTGGTACCGCTTACTTC | 59.448 | 52.381 | 7.57 | 0.00 | 0.00 | 3.01 |
1049 | 1164 | 1.553704 | CCCTTGGTACCGCTTACTTCT | 59.446 | 52.381 | 7.57 | 0.00 | 0.00 | 2.85 |
1050 | 1165 | 2.027469 | CCCTTGGTACCGCTTACTTCTT | 60.027 | 50.000 | 7.57 | 0.00 | 0.00 | 2.52 |
1183 | 1298 | 0.392998 | GCGGTCATGGATGGTTCACT | 60.393 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1245 | 1360 | 4.978083 | TCGCCGAGAATAAGTAGTTCTT | 57.022 | 40.909 | 0.00 | 0.00 | 36.13 | 2.52 |
1272 | 1387 | 2.037772 | CGATGCTATTGGCTTAGGGACT | 59.962 | 50.000 | 0.00 | 0.00 | 42.14 | 3.85 |
1273 | 1388 | 3.406764 | GATGCTATTGGCTTAGGGACTG | 58.593 | 50.000 | 0.00 | 0.00 | 40.17 | 3.51 |
1318 | 1435 | 2.543635 | TGGTTACCAAGTAGTCCCTCC | 58.456 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1319 | 1436 | 1.479730 | GGTTACCAAGTAGTCCCTCCG | 59.520 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
1320 | 1437 | 2.174360 | GTTACCAAGTAGTCCCTCCGT | 58.826 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
1321 | 1438 | 2.134789 | TACCAAGTAGTCCCTCCGTC | 57.865 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1322 | 1439 | 0.614134 | ACCAAGTAGTCCCTCCGTCC | 60.614 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1323 | 1440 | 1.328430 | CCAAGTAGTCCCTCCGTCCC | 61.328 | 65.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1324 | 1441 | 0.613853 | CAAGTAGTCCCTCCGTCCCA | 60.614 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
1325 | 1442 | 0.115745 | AAGTAGTCCCTCCGTCCCAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
1326 | 1443 | 0.115745 | AGTAGTCCCTCCGTCCCAAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1327 | 1444 | 0.978907 | GTAGTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1328 | 1445 | 1.558294 | GTAGTCCCTCCGTCCCAAAAT | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
1329 | 1446 | 1.961133 | AGTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1330 | 1447 | 2.271777 | AGTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
1331 | 1448 | 2.238898 | AGTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1332 | 1449 | 2.026542 | GTCCCTCCGTCCCAAAATAAGT | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1333 | 1450 | 2.026636 | TCCCTCCGTCCCAAAATAAGTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1334 | 1451 | 2.290705 | CCCTCCGTCCCAAAATAAGTGT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1335 | 1452 | 3.007635 | CCTCCGTCCCAAAATAAGTGTC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1336 | 1453 | 3.307480 | CCTCCGTCCCAAAATAAGTGTCT | 60.307 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
1337 | 1454 | 3.933332 | CTCCGTCCCAAAATAAGTGTCTC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
1338 | 1455 | 3.325425 | TCCGTCCCAAAATAAGTGTCTCA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
1339 | 1456 | 4.069304 | CCGTCCCAAAATAAGTGTCTCAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
1340 | 1457 | 4.083484 | CCGTCCCAAAATAAGTGTCTCAAC | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
1341 | 1458 | 4.755123 | CGTCCCAAAATAAGTGTCTCAACT | 59.245 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1342 | 1459 | 5.238650 | CGTCCCAAAATAAGTGTCTCAACTT | 59.761 | 40.000 | 0.00 | 0.00 | 42.89 | 2.66 |
1343 | 1460 | 6.238648 | CGTCCCAAAATAAGTGTCTCAACTTT | 60.239 | 38.462 | 0.00 | 0.00 | 40.77 | 2.66 |
1344 | 1461 | 6.918022 | GTCCCAAAATAAGTGTCTCAACTTTG | 59.082 | 38.462 | 0.00 | 0.00 | 40.77 | 2.77 |
1345 | 1462 | 6.605594 | TCCCAAAATAAGTGTCTCAACTTTGT | 59.394 | 34.615 | 0.00 | 0.00 | 40.77 | 2.83 |
1346 | 1463 | 7.776030 | TCCCAAAATAAGTGTCTCAACTTTGTA | 59.224 | 33.333 | 0.00 | 0.00 | 40.77 | 2.41 |
1347 | 1464 | 7.860872 | CCCAAAATAAGTGTCTCAACTTTGTAC | 59.139 | 37.037 | 0.00 | 0.00 | 40.77 | 2.90 |
1348 | 1465 | 8.621286 | CCAAAATAAGTGTCTCAACTTTGTACT | 58.379 | 33.333 | 0.00 | 0.00 | 40.77 | 2.73 |
1351 | 1468 | 8.535690 | AATAAGTGTCTCAACTTTGTACTAGC | 57.464 | 34.615 | 0.00 | 0.00 | 40.77 | 3.42 |
1352 | 1469 | 5.793030 | AGTGTCTCAACTTTGTACTAGCT | 57.207 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
1353 | 1470 | 5.774630 | AGTGTCTCAACTTTGTACTAGCTC | 58.225 | 41.667 | 0.00 | 0.00 | 0.00 | 4.09 |
1354 | 1471 | 5.536916 | AGTGTCTCAACTTTGTACTAGCTCT | 59.463 | 40.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1355 | 1472 | 6.715718 | AGTGTCTCAACTTTGTACTAGCTCTA | 59.284 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
1356 | 1473 | 7.024768 | GTGTCTCAACTTTGTACTAGCTCTAG | 58.975 | 42.308 | 0.00 | 2.55 | 39.04 | 2.43 |
1358 | 1475 | 7.881751 | TGTCTCAACTTTGTACTAGCTCTAGTA | 59.118 | 37.037 | 11.59 | 11.59 | 43.98 | 1.82 |
1359 | 1476 | 8.895737 | GTCTCAACTTTGTACTAGCTCTAGTAT | 58.104 | 37.037 | 16.96 | 1.87 | 46.57 | 2.12 |
1394 | 1511 | 9.793259 | ACTAATCTCAAGACACTTATTTTTGGA | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 3.53 |
1396 | 1513 | 6.539649 | TCTCAAGACACTTATTTTTGGACG | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
1397 | 1514 | 5.468746 | TCTCAAGACACTTATTTTTGGACGG | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1398 | 1515 | 5.369833 | TCAAGACACTTATTTTTGGACGGA | 58.630 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
1399 | 1516 | 5.468746 | TCAAGACACTTATTTTTGGACGGAG | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1400 | 1517 | 4.324267 | AGACACTTATTTTTGGACGGAGG | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
1401 | 1518 | 3.418047 | ACACTTATTTTTGGACGGAGGG | 58.582 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
1402 | 1519 | 3.073356 | ACACTTATTTTTGGACGGAGGGA | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
1403 | 1520 | 3.689649 | CACTTATTTTTGGACGGAGGGAG | 59.310 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1455 | 1572 | 1.935873 | CTCGGGAGACACGTAATCGTA | 59.064 | 52.381 | 0.00 | 0.00 | 40.84 | 3.43 |
1598 | 1715 | 1.999648 | ACGTCCATAGGCCGGTAATA | 58.000 | 50.000 | 1.90 | 0.00 | 0.00 | 0.98 |
1634 | 1753 | 7.233962 | TGCATCTATCATTTAGCATCCCAAATT | 59.766 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1644 | 1763 | 7.487822 | TTAGCATCCCAAATTTTTGTATCCA | 57.512 | 32.000 | 2.63 | 0.00 | 36.45 | 3.41 |
1876 | 2196 | 3.781079 | TTGTGCAGAACTGAAACAAGG | 57.219 | 42.857 | 14.74 | 0.00 | 35.33 | 3.61 |
1887 | 2207 | 8.507249 | CAGAACTGAAACAAGGGTCTTTAATAG | 58.493 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
1888 | 2208 | 8.218488 | AGAACTGAAACAAGGGTCTTTAATAGT | 58.782 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
1889 | 2209 | 9.498176 | GAACTGAAACAAGGGTCTTTAATAGTA | 57.502 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1920 | 2240 | 5.204409 | TGTTACTACCGAGCAAGAAAAGA | 57.796 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
1931 | 2251 | 3.075148 | GCAAGAAAAGAGGAGTGGTACC | 58.925 | 50.000 | 4.43 | 4.43 | 0.00 | 3.34 |
1976 | 2296 | 3.262405 | AGGGTCATGTTTTTAGCTACCGA | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2085 | 2405 | 3.926527 | CGCTTTACTAATGTGTCTGCAGA | 59.073 | 43.478 | 13.74 | 13.74 | 0.00 | 4.26 |
2575 | 2895 | 7.392953 | TCACTGCTCATTATGTTTGTTCCATAA | 59.607 | 33.333 | 0.00 | 0.00 | 38.68 | 1.90 |
2586 | 2906 | 8.647143 | ATGTTTGTTCCATAACTTTTCTTGTG | 57.353 | 30.769 | 0.00 | 0.00 | 36.51 | 3.33 |
2625 | 2945 | 0.170561 | CTTGTGATGCCTGCTCTTGC | 59.829 | 55.000 | 0.00 | 0.00 | 40.20 | 4.01 |
2760 | 3081 | 3.006940 | TGCTATCCGCACAACCTTTTAG | 58.993 | 45.455 | 0.00 | 0.00 | 45.47 | 1.85 |
2768 | 3089 | 5.010922 | TCCGCACAACCTTTTAGTCTTACTA | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2769 | 3090 | 5.347907 | CCGCACAACCTTTTAGTCTTACTAG | 59.652 | 44.000 | 0.00 | 0.00 | 31.47 | 2.57 |
2770 | 3091 | 5.347907 | CGCACAACCTTTTAGTCTTACTAGG | 59.652 | 44.000 | 0.00 | 0.00 | 31.47 | 3.02 |
2771 | 3092 | 6.228995 | GCACAACCTTTTAGTCTTACTAGGT | 58.771 | 40.000 | 0.00 | 0.00 | 30.72 | 3.08 |
2772 | 3093 | 6.368243 | GCACAACCTTTTAGTCTTACTAGGTC | 59.632 | 42.308 | 0.00 | 0.00 | 28.87 | 3.85 |
2773 | 3094 | 6.872547 | CACAACCTTTTAGTCTTACTAGGTCC | 59.127 | 42.308 | 0.00 | 0.00 | 28.87 | 4.46 |
2774 | 3095 | 6.786461 | ACAACCTTTTAGTCTTACTAGGTCCT | 59.214 | 38.462 | 0.00 | 0.00 | 28.87 | 3.85 |
2775 | 3096 | 7.952368 | ACAACCTTTTAGTCTTACTAGGTCCTA | 59.048 | 37.037 | 0.00 | 0.00 | 28.87 | 2.94 |
2776 | 3097 | 8.979534 | CAACCTTTTAGTCTTACTAGGTCCTAT | 58.020 | 37.037 | 0.00 | 0.00 | 28.87 | 2.57 |
2778 | 3099 | 9.865152 | ACCTTTTAGTCTTACTAGGTCCTATAG | 57.135 | 37.037 | 0.00 | 0.00 | 31.47 | 1.31 |
2792 | 3113 | 9.593134 | CTAGGTCCTATAGAATATGTGAATTGC | 57.407 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
2793 | 3114 | 7.977818 | AGGTCCTATAGAATATGTGAATTGCA | 58.022 | 34.615 | 0.00 | 0.00 | 0.00 | 4.08 |
2805 | 3126 | 4.019919 | GTGAATTGCACGATGTATTGCT | 57.980 | 40.909 | 0.00 | 0.00 | 39.62 | 3.91 |
2806 | 3127 | 4.031028 | GTGAATTGCACGATGTATTGCTC | 58.969 | 43.478 | 0.00 | 0.00 | 39.62 | 4.26 |
2807 | 3128 | 3.940852 | TGAATTGCACGATGTATTGCTCT | 59.059 | 39.130 | 0.00 | 0.00 | 39.62 | 4.09 |
2808 | 3129 | 4.034394 | TGAATTGCACGATGTATTGCTCTC | 59.966 | 41.667 | 0.00 | 0.00 | 39.62 | 3.20 |
2809 | 3130 | 1.559831 | TGCACGATGTATTGCTCTCG | 58.440 | 50.000 | 0.00 | 0.00 | 39.62 | 4.04 |
2810 | 3131 | 1.135112 | TGCACGATGTATTGCTCTCGT | 60.135 | 47.619 | 0.00 | 0.00 | 44.48 | 4.18 |
2812 | 3133 | 1.560923 | ACGATGTATTGCTCTCGTGC | 58.439 | 50.000 | 0.00 | 0.00 | 42.26 | 5.34 |
2813 | 3134 | 1.135112 | ACGATGTATTGCTCTCGTGCA | 60.135 | 47.619 | 0.00 | 0.00 | 42.26 | 4.57 |
2814 | 3135 | 2.130395 | CGATGTATTGCTCTCGTGCAT | 58.870 | 47.619 | 0.00 | 0.00 | 42.96 | 3.96 |
2815 | 3136 | 3.243401 | ACGATGTATTGCTCTCGTGCATA | 60.243 | 43.478 | 0.00 | 0.00 | 42.26 | 3.14 |
2816 | 3137 | 3.363128 | CGATGTATTGCTCTCGTGCATAG | 59.637 | 47.826 | 0.00 | 0.00 | 42.96 | 2.23 |
2817 | 3138 | 3.097877 | TGTATTGCTCTCGTGCATAGG | 57.902 | 47.619 | 0.00 | 0.00 | 42.96 | 2.57 |
2818 | 3139 | 1.795286 | GTATTGCTCTCGTGCATAGGC | 59.205 | 52.381 | 0.00 | 0.00 | 42.96 | 3.93 |
2835 | 3156 | 7.624706 | GCATAGGCACGTATATATGATGTAC | 57.375 | 40.000 | 8.98 | 0.00 | 40.72 | 2.90 |
2836 | 3157 | 7.200455 | GCATAGGCACGTATATATGATGTACA | 58.800 | 38.462 | 8.98 | 0.00 | 40.72 | 2.90 |
2837 | 3158 | 7.704899 | GCATAGGCACGTATATATGATGTACAA | 59.295 | 37.037 | 8.98 | 0.00 | 40.72 | 2.41 |
2838 | 3159 | 9.581099 | CATAGGCACGTATATATGATGTACAAA | 57.419 | 33.333 | 8.98 | 0.00 | 0.00 | 2.83 |
2839 | 3160 | 9.803315 | ATAGGCACGTATATATGATGTACAAAG | 57.197 | 33.333 | 8.98 | 0.00 | 0.00 | 2.77 |
2840 | 3161 | 7.097192 | AGGCACGTATATATGATGTACAAAGG | 58.903 | 38.462 | 8.98 | 0.00 | 0.00 | 3.11 |
2841 | 3162 | 6.872020 | GGCACGTATATATGATGTACAAAGGT | 59.128 | 38.462 | 8.98 | 0.00 | 0.00 | 3.50 |
2842 | 3163 | 7.148639 | GGCACGTATATATGATGTACAAAGGTG | 60.149 | 40.741 | 8.98 | 2.31 | 0.00 | 4.00 |
2843 | 3164 | 7.148639 | GCACGTATATATGATGTACAAAGGTGG | 60.149 | 40.741 | 8.98 | 0.00 | 0.00 | 4.61 |
2844 | 3165 | 7.330946 | CACGTATATATGATGTACAAAGGTGGG | 59.669 | 40.741 | 8.98 | 0.00 | 0.00 | 4.61 |
2845 | 3166 | 6.312918 | CGTATATATGATGTACAAAGGTGGGC | 59.687 | 42.308 | 0.00 | 0.00 | 0.00 | 5.36 |
2846 | 3167 | 2.143876 | ATGATGTACAAAGGTGGGCC | 57.856 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
2847 | 3168 | 0.774276 | TGATGTACAAAGGTGGGCCA | 59.226 | 50.000 | 0.00 | 0.00 | 37.19 | 5.36 |
2848 | 3169 | 1.173913 | GATGTACAAAGGTGGGCCAC | 58.826 | 55.000 | 28.69 | 28.69 | 37.19 | 5.01 |
2849 | 3170 | 0.608035 | ATGTACAAAGGTGGGCCACG | 60.608 | 55.000 | 29.18 | 18.12 | 34.83 | 4.94 |
2850 | 3171 | 1.969589 | GTACAAAGGTGGGCCACGG | 60.970 | 63.158 | 29.18 | 20.03 | 34.83 | 4.94 |
2851 | 3172 | 2.148052 | TACAAAGGTGGGCCACGGA | 61.148 | 57.895 | 29.18 | 10.44 | 34.83 | 4.69 |
2852 | 3173 | 2.400269 | TACAAAGGTGGGCCACGGAC | 62.400 | 60.000 | 29.18 | 16.36 | 34.83 | 4.79 |
2853 | 3174 | 4.280019 | AAAGGTGGGCCACGGACC | 62.280 | 66.667 | 29.18 | 16.48 | 45.60 | 4.46 |
2857 | 3178 | 3.948719 | GTGGGCCACGGACCTCAA | 61.949 | 66.667 | 22.83 | 0.00 | 45.59 | 3.02 |
2858 | 3179 | 3.948719 | TGGGCCACGGACCTCAAC | 61.949 | 66.667 | 10.00 | 0.00 | 45.59 | 3.18 |
2859 | 3180 | 3.637273 | GGGCCACGGACCTCAACT | 61.637 | 66.667 | 4.39 | 0.00 | 41.04 | 3.16 |
2860 | 3181 | 2.288025 | GGGCCACGGACCTCAACTA | 61.288 | 63.158 | 4.39 | 0.00 | 41.04 | 2.24 |
2861 | 3182 | 1.623542 | GGGCCACGGACCTCAACTAT | 61.624 | 60.000 | 4.39 | 0.00 | 41.04 | 2.12 |
2862 | 3183 | 1.117150 | GGCCACGGACCTCAACTATA | 58.883 | 55.000 | 0.00 | 0.00 | 0.00 | 1.31 |
2863 | 3184 | 1.202498 | GGCCACGGACCTCAACTATAC | 60.202 | 57.143 | 0.00 | 0.00 | 0.00 | 1.47 |
2864 | 3185 | 1.479323 | GCCACGGACCTCAACTATACA | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
2865 | 3186 | 2.093869 | GCCACGGACCTCAACTATACAA | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2866 | 3187 | 3.782046 | CCACGGACCTCAACTATACAAG | 58.218 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2867 | 3188 | 3.430374 | CCACGGACCTCAACTATACAAGG | 60.430 | 52.174 | 0.00 | 0.00 | 34.94 | 3.61 |
2868 | 3189 | 3.446161 | CACGGACCTCAACTATACAAGGA | 59.554 | 47.826 | 0.00 | 0.00 | 32.99 | 3.36 |
2869 | 3190 | 4.081862 | CACGGACCTCAACTATACAAGGAA | 60.082 | 45.833 | 0.00 | 0.00 | 32.99 | 3.36 |
2870 | 3191 | 4.081807 | ACGGACCTCAACTATACAAGGAAC | 60.082 | 45.833 | 0.00 | 0.00 | 32.99 | 3.62 |
2872 | 3193 | 5.359009 | CGGACCTCAACTATACAAGGAACTA | 59.641 | 44.000 | 0.00 | 0.00 | 38.49 | 2.24 |
2873 | 3194 | 6.459848 | CGGACCTCAACTATACAAGGAACTAG | 60.460 | 46.154 | 0.00 | 0.00 | 38.49 | 2.57 |
2874 | 3195 | 6.183360 | GGACCTCAACTATACAAGGAACTAGG | 60.183 | 46.154 | 0.00 | 0.00 | 38.49 | 3.02 |
2875 | 3196 | 6.500336 | ACCTCAACTATACAAGGAACTAGGA | 58.500 | 40.000 | 0.00 | 0.00 | 38.49 | 2.94 |
2876 | 3197 | 6.608002 | ACCTCAACTATACAAGGAACTAGGAG | 59.392 | 42.308 | 0.00 | 0.00 | 38.49 | 3.69 |
2877 | 3198 | 6.041069 | CCTCAACTATACAAGGAACTAGGAGG | 59.959 | 46.154 | 0.00 | 0.00 | 38.49 | 4.30 |
2878 | 3199 | 5.363005 | TCAACTATACAAGGAACTAGGAGGC | 59.637 | 44.000 | 0.00 | 0.00 | 38.49 | 4.70 |
2879 | 3200 | 3.890147 | ACTATACAAGGAACTAGGAGGCG | 59.110 | 47.826 | 0.00 | 0.00 | 38.49 | 5.52 |
2880 | 3201 | 1.481871 | TACAAGGAACTAGGAGGCGG | 58.518 | 55.000 | 0.00 | 0.00 | 38.49 | 6.13 |
2881 | 3202 | 1.265454 | ACAAGGAACTAGGAGGCGGG | 61.265 | 60.000 | 0.00 | 0.00 | 38.49 | 6.13 |
2882 | 3203 | 2.368011 | AAGGAACTAGGAGGCGGGC | 61.368 | 63.158 | 0.00 | 0.00 | 38.49 | 6.13 |
2883 | 3204 | 3.862991 | GGAACTAGGAGGCGGGCC | 61.863 | 72.222 | 0.18 | 0.18 | 0.00 | 5.80 |
2884 | 3205 | 3.862991 | GAACTAGGAGGCGGGCCC | 61.863 | 72.222 | 13.57 | 13.57 | 36.58 | 5.80 |
2885 | 3206 | 4.733725 | AACTAGGAGGCGGGCCCA | 62.734 | 66.667 | 24.92 | 0.00 | 36.58 | 5.36 |
2886 | 3207 | 4.733725 | ACTAGGAGGCGGGCCCAA | 62.734 | 66.667 | 24.92 | 0.00 | 36.58 | 4.12 |
2887 | 3208 | 3.171388 | CTAGGAGGCGGGCCCAAT | 61.171 | 66.667 | 24.92 | 6.29 | 36.58 | 3.16 |
2888 | 3209 | 1.841556 | CTAGGAGGCGGGCCCAATA | 60.842 | 63.158 | 24.92 | 3.53 | 36.58 | 1.90 |
2889 | 3210 | 2.113243 | CTAGGAGGCGGGCCCAATAC | 62.113 | 65.000 | 24.92 | 7.37 | 36.58 | 1.89 |
2890 | 3211 | 2.900269 | TAGGAGGCGGGCCCAATACA | 62.900 | 60.000 | 24.92 | 0.00 | 36.58 | 2.29 |
2891 | 3212 | 2.516225 | GAGGCGGGCCCAATACAC | 60.516 | 66.667 | 24.92 | 4.31 | 36.58 | 2.90 |
2892 | 3213 | 3.334891 | AGGCGGGCCCAATACACA | 61.335 | 61.111 | 24.92 | 0.00 | 36.58 | 3.72 |
2893 | 3214 | 2.361865 | GGCGGGCCCAATACACAA | 60.362 | 61.111 | 24.92 | 0.00 | 0.00 | 3.33 |
2894 | 3215 | 1.756561 | GGCGGGCCCAATACACAAT | 60.757 | 57.895 | 24.92 | 0.00 | 0.00 | 2.71 |
2895 | 3216 | 0.466555 | GGCGGGCCCAATACACAATA | 60.467 | 55.000 | 24.92 | 0.00 | 0.00 | 1.90 |
2896 | 3217 | 1.616159 | GCGGGCCCAATACACAATAT | 58.384 | 50.000 | 24.92 | 0.00 | 0.00 | 1.28 |
2897 | 3218 | 1.269448 | GCGGGCCCAATACACAATATG | 59.731 | 52.381 | 24.92 | 0.60 | 0.00 | 1.78 |
2898 | 3219 | 1.269448 | CGGGCCCAATACACAATATGC | 59.731 | 52.381 | 24.92 | 0.00 | 0.00 | 3.14 |
2899 | 3220 | 2.315176 | GGGCCCAATACACAATATGCA | 58.685 | 47.619 | 19.95 | 0.00 | 0.00 | 3.96 |
2900 | 3221 | 2.035832 | GGGCCCAATACACAATATGCAC | 59.964 | 50.000 | 19.95 | 0.00 | 0.00 | 4.57 |
2901 | 3222 | 2.692557 | GGCCCAATACACAATATGCACA | 59.307 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
2902 | 3223 | 3.321682 | GGCCCAATACACAATATGCACAT | 59.678 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
2903 | 3224 | 4.522405 | GGCCCAATACACAATATGCACATA | 59.478 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2904 | 3225 | 5.010516 | GGCCCAATACACAATATGCACATAA | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2905 | 3226 | 5.920273 | GCCCAATACACAATATGCACATAAC | 59.080 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2906 | 3227 | 6.460814 | GCCCAATACACAATATGCACATAACA | 60.461 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
2907 | 3228 | 6.917477 | CCCAATACACAATATGCACATAACAC | 59.083 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
2908 | 3229 | 7.416101 | CCCAATACACAATATGCACATAACACA | 60.416 | 37.037 | 0.00 | 0.00 | 0.00 | 3.72 |
2909 | 3230 | 8.136800 | CCAATACACAATATGCACATAACACAT | 58.863 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
2914 | 3235 | 9.559732 | ACACAATATGCACATAACACATATACT | 57.440 | 29.630 | 0.00 | 0.00 | 36.28 | 2.12 |
2916 | 3237 | 9.777297 | ACAATATGCACATAACACATATACTCA | 57.223 | 29.630 | 0.00 | 0.00 | 36.28 | 3.41 |
2942 | 3263 | 5.746245 | CAGCTCCTACAAGATTCTAGTTTCG | 59.254 | 44.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2954 | 3275 | 4.928661 | TCTAGTTTCGAGAAAGCAATGC | 57.071 | 40.909 | 0.00 | 0.00 | 0.00 | 3.56 |
3047 | 3368 | 7.094377 | GCTCTAAAATTGTTCAATGTAGGTGGA | 60.094 | 37.037 | 12.44 | 0.00 | 0.00 | 4.02 |
3134 | 3455 | 5.514500 | ACATTTGGTACCCTGTTGTCTAT | 57.486 | 39.130 | 10.07 | 0.00 | 0.00 | 1.98 |
3135 | 3456 | 5.887754 | ACATTTGGTACCCTGTTGTCTATT | 58.112 | 37.500 | 10.07 | 0.00 | 0.00 | 1.73 |
3173 | 3494 | 3.118371 | ACAAATCTAGTTTAGGCGGGGAG | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
3364 | 4003 | 3.388024 | AGCCAACCCTTTCTTTCCTTTTC | 59.612 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
3369 | 4008 | 6.884295 | CCAACCCTTTCTTTCCTTTTCTTTTT | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
3727 | 4366 | 3.251484 | TCAAGTCAAGGTGGAGGAGAAT | 58.749 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
3835 | 4474 | 0.872449 | AGGGGAAGGGTATCCGGTAT | 59.128 | 55.000 | 0.00 | 0.00 | 40.62 | 2.73 |
3936 | 4575 | 9.103048 | CATTTCATACGTACTTTTGTTCTGTTC | 57.897 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
3943 | 4582 | 3.467803 | ACTTTTGTTCTGTTCTCCCTCG | 58.532 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
3992 | 4631 | 0.881796 | GTTCCTTAGCCCTTGCACAC | 59.118 | 55.000 | 0.00 | 0.00 | 41.13 | 3.82 |
4025 | 4664 | 7.703328 | AGAAAAATGTCACAGTTTACGTCATT | 58.297 | 30.769 | 3.17 | 0.00 | 30.35 | 2.57 |
4032 | 4671 | 4.924462 | TCACAGTTTACGTCATTGCGATAA | 59.076 | 37.500 | 0.00 | 0.00 | 35.59 | 1.75 |
4148 | 4802 | 3.009723 | ACGGCAAACACTATGAATGGAG | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
4149 | 4803 | 2.223340 | CGGCAAACACTATGAATGGAGC | 60.223 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
4150 | 4804 | 2.754552 | GGCAAACACTATGAATGGAGCA | 59.245 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
4151 | 4805 | 3.193267 | GGCAAACACTATGAATGGAGCAA | 59.807 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
4152 | 4806 | 4.321899 | GGCAAACACTATGAATGGAGCAAA | 60.322 | 41.667 | 0.00 | 0.00 | 0.00 | 3.68 |
4153 | 4807 | 4.622740 | GCAAACACTATGAATGGAGCAAAC | 59.377 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
4154 | 4808 | 5.771469 | CAAACACTATGAATGGAGCAAACA | 58.229 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
4155 | 4809 | 5.376854 | AACACTATGAATGGAGCAAACAC | 57.623 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
4156 | 4810 | 4.655963 | ACACTATGAATGGAGCAAACACT | 58.344 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
4157 | 4811 | 5.804639 | ACACTATGAATGGAGCAAACACTA | 58.195 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
4158 | 4812 | 6.418101 | ACACTATGAATGGAGCAAACACTAT | 58.582 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4159 | 4813 | 6.317140 | ACACTATGAATGGAGCAAACACTATG | 59.683 | 38.462 | 0.00 | 0.00 | 0.00 | 2.23 |
4160 | 4814 | 6.539826 | CACTATGAATGGAGCAAACACTATGA | 59.460 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
4161 | 4815 | 7.066163 | CACTATGAATGGAGCAAACACTATGAA | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
4162 | 4816 | 7.776969 | ACTATGAATGGAGCAAACACTATGAAT | 59.223 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
4163 | 4817 | 6.198650 | TGAATGGAGCAAACACTATGAATG | 57.801 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
4164 | 4818 | 5.125900 | TGAATGGAGCAAACACTATGAATGG | 59.874 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4165 | 4819 | 4.299586 | TGGAGCAAACACTATGAATGGA | 57.700 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
4244 | 4898 | 2.997897 | ACTGCACGGAGAGGACCC | 60.998 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
4346 | 5001 | 1.979693 | GTGGCGTGGACTCCTCTCT | 60.980 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
4347 | 5002 | 1.679305 | TGGCGTGGACTCCTCTCTC | 60.679 | 63.158 | 0.00 | 0.00 | 0.00 | 3.20 |
4388 | 5043 | 2.749682 | ACTGCCAGCGGTGAATGA | 59.250 | 55.556 | 17.83 | 0.00 | 33.73 | 2.57 |
4565 | 5225 | 1.988846 | TGTGGGATACATGTTGGGTCA | 59.011 | 47.619 | 2.30 | 0.00 | 33.42 | 4.02 |
4597 | 5257 | 3.762247 | CCAAATGTGGCGCCCCAG | 61.762 | 66.667 | 26.77 | 6.84 | 43.18 | 4.45 |
4598 | 5258 | 4.440127 | CAAATGTGGCGCCCCAGC | 62.440 | 66.667 | 26.77 | 12.20 | 43.18 | 4.85 |
4623 | 5283 | 1.808945 | ACGAAAGAGAATGCTTGGCTG | 59.191 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
4639 | 5299 | 4.392921 | TGGCTGACTTATGAGCTTCTAC | 57.607 | 45.455 | 0.00 | 0.00 | 35.42 | 2.59 |
4641 | 5301 | 3.181485 | GGCTGACTTATGAGCTTCTACGT | 60.181 | 47.826 | 0.00 | 0.00 | 35.42 | 3.57 |
4644 | 5304 | 4.659088 | TGACTTATGAGCTTCTACGTTCG | 58.341 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
4651 | 5311 | 0.912528 | GCTTCTACGTTCGCCTTACG | 59.087 | 55.000 | 0.00 | 0.00 | 44.20 | 3.18 |
4703 | 5363 | 8.691661 | AAAAAGTAGAGCCTTATGACTTTCAA | 57.308 | 30.769 | 0.00 | 0.00 | 38.94 | 2.69 |
4704 | 5364 | 8.691661 | AAAAGTAGAGCCTTATGACTTTCAAA | 57.308 | 30.769 | 0.00 | 0.00 | 38.94 | 2.69 |
4705 | 5365 | 8.691661 | AAAGTAGAGCCTTATGACTTTCAAAA | 57.308 | 30.769 | 0.00 | 0.00 | 35.92 | 2.44 |
4706 | 5366 | 7.913674 | AGTAGAGCCTTATGACTTTCAAAAG | 57.086 | 36.000 | 0.97 | 0.97 | 41.73 | 2.27 |
4749 | 5409 | 3.686916 | AGAGGACAAGCAAGGTCTAAC | 57.313 | 47.619 | 0.00 | 0.00 | 35.61 | 2.34 |
4750 | 5410 | 2.303311 | AGAGGACAAGCAAGGTCTAACC | 59.697 | 50.000 | 0.00 | 0.00 | 38.99 | 2.85 |
4766 | 5426 | 4.037927 | TCTAACCTTGGGGGAGTTGATAG | 58.962 | 47.826 | 0.00 | 0.00 | 38.76 | 2.08 |
4783 | 5443 | 9.827411 | GAGTTGATAGGTCTGTATTTTGTTTTC | 57.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
4787 | 5447 | 8.664798 | TGATAGGTCTGTATTTTGTTTTCATCG | 58.335 | 33.333 | 0.00 | 0.00 | 0.00 | 3.84 |
4802 | 5462 | 2.912771 | TCATCGACACCTCTCTCTCTC | 58.087 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
4803 | 5463 | 2.503765 | TCATCGACACCTCTCTCTCTCT | 59.496 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
4805 | 5465 | 4.162509 | TCATCGACACCTCTCTCTCTCTAA | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
4806 | 5466 | 4.764050 | TCGACACCTCTCTCTCTCTAAT | 57.236 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
4860 | 5520 | 1.174783 | TGAGGACAAGCGAGGTCTAC | 58.825 | 55.000 | 5.63 | 2.21 | 35.61 | 2.59 |
4866 | 5526 | 1.961394 | ACAAGCGAGGTCTACACTTGA | 59.039 | 47.619 | 7.95 | 0.00 | 40.06 | 3.02 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
29 | 30 | 1.471684 | GGCAGCTTCAATGGTCTCTTG | 59.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
116 | 117 | 2.906458 | CGGCATCCTGGCTCTCTT | 59.094 | 61.111 | 0.00 | 0.00 | 41.25 | 2.85 |
190 | 217 | 0.394352 | CACCTTTCCTTGCCCGCTAT | 60.394 | 55.000 | 0.00 | 0.00 | 0.00 | 2.97 |
203 | 230 | 1.692411 | GTTCAAGCACTCCCACCTTT | 58.308 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
229 | 256 | 4.980805 | TGGAACGCTGGTCGGCAC | 62.981 | 66.667 | 2.55 | 0.00 | 43.86 | 5.01 |
315 | 344 | 1.344438 | AGAGCGGACACACATCTTCAA | 59.656 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
325 | 354 | 2.808543 | ACAAAATCTTGAGAGCGGACAC | 59.191 | 45.455 | 0.00 | 0.00 | 36.33 | 3.67 |
328 | 357 | 2.226437 | GCAACAAAATCTTGAGAGCGGA | 59.774 | 45.455 | 0.00 | 0.00 | 36.33 | 5.54 |
336 | 386 | 3.616379 | ACAAACGGTGCAACAAAATCTTG | 59.384 | 39.130 | 0.98 | 0.00 | 39.98 | 3.02 |
470 | 537 | 9.646522 | AATAAAGGTTCCACATAGCAAATATCT | 57.353 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
556 | 647 | 8.962679 | TGTAAAGTTTTATCACAGGTCTTTTGT | 58.037 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
557 | 648 | 9.796120 | TTGTAAAGTTTTATCACAGGTCTTTTG | 57.204 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
561 | 652 | 9.403583 | TCTTTTGTAAAGTTTTATCACAGGTCT | 57.596 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
613 | 704 | 1.951602 | GTAGGTCTTGCGGGTTTGTTT | 59.048 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
614 | 705 | 1.601166 | GTAGGTCTTGCGGGTTTGTT | 58.399 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
615 | 706 | 0.250597 | GGTAGGTCTTGCGGGTTTGT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
623 | 715 | 2.399356 | GCTTGGCGGTAGGTCTTGC | 61.399 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
672 | 766 | 2.992689 | TACCGCCGCAAGTCTGGA | 60.993 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
674 | 768 | 2.509336 | CCTACCGCCGCAAGTCTG | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
763 | 857 | 1.982938 | GCTCCACGGTAGGGTCAGT | 60.983 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
830 | 930 | 5.317808 | TGGTAAACAAATTCGGGATCTTGA | 58.682 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
831 | 931 | 5.637006 | TGGTAAACAAATTCGGGATCTTG | 57.363 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
832 | 932 | 6.658188 | TTTGGTAAACAAATTCGGGATCTT | 57.342 | 33.333 | 0.00 | 0.00 | 43.81 | 2.40 |
861 | 964 | 8.177119 | AGACACAGGCTAAATTTCATGTTTTA | 57.823 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
900 | 1003 | 0.182299 | CAGAAGATGGGGGAAGAGGC | 59.818 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
912 | 1015 | 9.620259 | GTTTCTTATCCTTTATCCACAGAAGAT | 57.380 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
950 | 1059 | 3.043713 | TGTGCGCGCTTCTTCCTG | 61.044 | 61.111 | 33.29 | 0.00 | 0.00 | 3.86 |
952 | 1061 | 4.090057 | GGTGTGCGCGCTTCTTCC | 62.090 | 66.667 | 33.29 | 23.21 | 0.00 | 3.46 |
1048 | 1163 | 3.133003 | ACATCGATGAGGGGTGTAGAAAG | 59.867 | 47.826 | 31.33 | 0.00 | 0.00 | 2.62 |
1049 | 1164 | 3.104512 | ACATCGATGAGGGGTGTAGAAA | 58.895 | 45.455 | 31.33 | 0.00 | 0.00 | 2.52 |
1050 | 1165 | 2.693591 | GACATCGATGAGGGGTGTAGAA | 59.306 | 50.000 | 31.33 | 0.00 | 0.00 | 2.10 |
1170 | 1285 | 2.292267 | GATTGCGAGTGAACCATCCAT | 58.708 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1313 | 1430 | 2.290705 | ACACTTATTTTGGGACGGAGGG | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1316 | 1433 | 3.325425 | TGAGACACTTATTTTGGGACGGA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
1317 | 1434 | 3.670625 | TGAGACACTTATTTTGGGACGG | 58.329 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
1318 | 1435 | 4.755123 | AGTTGAGACACTTATTTTGGGACG | 59.245 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
1319 | 1436 | 6.635030 | AAGTTGAGACACTTATTTTGGGAC | 57.365 | 37.500 | 0.00 | 0.00 | 35.10 | 4.46 |
1320 | 1437 | 6.605594 | ACAAAGTTGAGACACTTATTTTGGGA | 59.394 | 34.615 | 0.00 | 0.00 | 35.87 | 4.37 |
1321 | 1438 | 6.805713 | ACAAAGTTGAGACACTTATTTTGGG | 58.194 | 36.000 | 0.00 | 0.00 | 35.87 | 4.12 |
1322 | 1439 | 8.621286 | AGTACAAAGTTGAGACACTTATTTTGG | 58.379 | 33.333 | 0.00 | 0.00 | 35.87 | 3.28 |
1325 | 1442 | 8.989980 | GCTAGTACAAAGTTGAGACACTTATTT | 58.010 | 33.333 | 0.00 | 0.00 | 35.87 | 1.40 |
1326 | 1443 | 8.368668 | AGCTAGTACAAAGTTGAGACACTTATT | 58.631 | 33.333 | 0.00 | 0.00 | 35.87 | 1.40 |
1327 | 1444 | 7.897864 | AGCTAGTACAAAGTTGAGACACTTAT | 58.102 | 34.615 | 0.00 | 0.00 | 35.87 | 1.73 |
1328 | 1445 | 7.230913 | AGAGCTAGTACAAAGTTGAGACACTTA | 59.769 | 37.037 | 0.00 | 0.00 | 35.87 | 2.24 |
1329 | 1446 | 6.041069 | AGAGCTAGTACAAAGTTGAGACACTT | 59.959 | 38.462 | 0.00 | 0.00 | 38.74 | 3.16 |
1330 | 1447 | 5.536916 | AGAGCTAGTACAAAGTTGAGACACT | 59.463 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1331 | 1448 | 5.774630 | AGAGCTAGTACAAAGTTGAGACAC | 58.225 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
1332 | 1449 | 6.715718 | ACTAGAGCTAGTACAAAGTTGAGACA | 59.284 | 38.462 | 8.35 | 0.00 | 43.98 | 3.41 |
1333 | 1450 | 7.148355 | ACTAGAGCTAGTACAAAGTTGAGAC | 57.852 | 40.000 | 8.35 | 0.00 | 43.98 | 3.36 |
1368 | 1485 | 9.793259 | TCCAAAAATAAGTGTCTTGAGATTAGT | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
1370 | 1487 | 8.717821 | CGTCCAAAAATAAGTGTCTTGAGATTA | 58.282 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
1371 | 1488 | 7.308589 | CCGTCCAAAAATAAGTGTCTTGAGATT | 60.309 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
1372 | 1489 | 6.149474 | CCGTCCAAAAATAAGTGTCTTGAGAT | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
1373 | 1490 | 5.468746 | CCGTCCAAAAATAAGTGTCTTGAGA | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1374 | 1491 | 5.468746 | TCCGTCCAAAAATAAGTGTCTTGAG | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1375 | 1492 | 5.369833 | TCCGTCCAAAAATAAGTGTCTTGA | 58.630 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
1376 | 1493 | 5.334879 | CCTCCGTCCAAAAATAAGTGTCTTG | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1377 | 1494 | 4.760204 | CCTCCGTCCAAAAATAAGTGTCTT | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
1378 | 1495 | 4.324267 | CCTCCGTCCAAAAATAAGTGTCT | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1379 | 1496 | 3.439129 | CCCTCCGTCCAAAAATAAGTGTC | 59.561 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
1380 | 1497 | 3.073356 | TCCCTCCGTCCAAAAATAAGTGT | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
1381 | 1498 | 3.681593 | TCCCTCCGTCCAAAAATAAGTG | 58.318 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1382 | 1499 | 3.329814 | ACTCCCTCCGTCCAAAAATAAGT | 59.670 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
1383 | 1500 | 3.951663 | ACTCCCTCCGTCCAAAAATAAG | 58.048 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
1384 | 1501 | 4.533311 | ACTACTCCCTCCGTCCAAAAATAA | 59.467 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
1385 | 1502 | 4.098894 | ACTACTCCCTCCGTCCAAAAATA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
1386 | 1503 | 2.910977 | ACTACTCCCTCCGTCCAAAAAT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1387 | 1504 | 2.332117 | ACTACTCCCTCCGTCCAAAAA | 58.668 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
1388 | 1505 | 2.019807 | ACTACTCCCTCCGTCCAAAA | 57.980 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1389 | 1506 | 2.905415 | TACTACTCCCTCCGTCCAAA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1390 | 1507 | 2.042162 | ACTTACTACTCCCTCCGTCCAA | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1391 | 1508 | 1.637553 | ACTTACTACTCCCTCCGTCCA | 59.362 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1392 | 1509 | 2.433662 | ACTTACTACTCCCTCCGTCC | 57.566 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1393 | 1510 | 3.350833 | TGAACTTACTACTCCCTCCGTC | 58.649 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1394 | 1511 | 3.354467 | CTGAACTTACTACTCCCTCCGT | 58.646 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1395 | 1512 | 2.099427 | GCTGAACTTACTACTCCCTCCG | 59.901 | 54.545 | 0.00 | 0.00 | 0.00 | 4.63 |
1396 | 1513 | 2.099427 | CGCTGAACTTACTACTCCCTCC | 59.901 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
1397 | 1514 | 2.754002 | ACGCTGAACTTACTACTCCCTC | 59.246 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1398 | 1515 | 2.805194 | ACGCTGAACTTACTACTCCCT | 58.195 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
1399 | 1516 | 3.193056 | AGAACGCTGAACTTACTACTCCC | 59.807 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1400 | 1517 | 4.156373 | AGAGAACGCTGAACTTACTACTCC | 59.844 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
1401 | 1518 | 5.090083 | CAGAGAACGCTGAACTTACTACTC | 58.910 | 45.833 | 0.00 | 0.00 | 38.14 | 2.59 |
1402 | 1519 | 4.760715 | TCAGAGAACGCTGAACTTACTACT | 59.239 | 41.667 | 5.84 | 0.00 | 41.65 | 2.57 |
1403 | 1520 | 4.852650 | GTCAGAGAACGCTGAACTTACTAC | 59.147 | 45.833 | 9.53 | 0.00 | 45.69 | 2.73 |
1455 | 1572 | 2.610438 | ACAATGAGCAAAGTCCCCAT | 57.390 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1644 | 1763 | 3.471430 | TCATGATCCACCCCATTTTGT | 57.529 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
1887 | 2207 | 8.638685 | TGCTCGGTAGTAACAAAATAAGATAC | 57.361 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1888 | 2208 | 9.309516 | CTTGCTCGGTAGTAACAAAATAAGATA | 57.690 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
1889 | 2209 | 8.038944 | TCTTGCTCGGTAGTAACAAAATAAGAT | 58.961 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
1920 | 2240 | 1.008449 | AGCATACCAGGTACCACTCCT | 59.992 | 52.381 | 15.94 | 0.00 | 35.45 | 3.69 |
1931 | 2251 | 3.845781 | ACCATTCACCTAGCATACCAG | 57.154 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
2085 | 2405 | 9.712359 | GTCAAAAATAAGAACACGTTACTTTCT | 57.288 | 29.630 | 4.43 | 0.00 | 0.00 | 2.52 |
2169 | 2489 | 9.545105 | TTCTTGAATTGCTGTTTTATTTCACAT | 57.455 | 25.926 | 0.00 | 0.00 | 0.00 | 3.21 |
2209 | 2529 | 5.168569 | CGAAGAAGTATGCCTTGTGACTTA | 58.831 | 41.667 | 0.00 | 0.00 | 32.37 | 2.24 |
2575 | 2895 | 5.258051 | TCACTTTGGGTACACAAGAAAAGT | 58.742 | 37.500 | 11.03 | 8.80 | 38.13 | 2.66 |
2625 | 2945 | 6.431852 | TGATGGCTCATATATGTGAATTGTGG | 59.568 | 38.462 | 16.98 | 0.00 | 0.00 | 4.17 |
2689 | 3010 | 5.122239 | CACTGGTGGTATCACAGTGTAATTG | 59.878 | 44.000 | 21.14 | 4.81 | 45.32 | 2.32 |
2768 | 3089 | 7.880195 | GTGCAATTCACATATTCTATAGGACCT | 59.120 | 37.037 | 0.00 | 0.00 | 44.98 | 3.85 |
2769 | 3090 | 7.148573 | CGTGCAATTCACATATTCTATAGGACC | 60.149 | 40.741 | 0.00 | 0.00 | 45.92 | 4.46 |
2770 | 3091 | 7.598869 | TCGTGCAATTCACATATTCTATAGGAC | 59.401 | 37.037 | 0.00 | 0.00 | 45.92 | 3.85 |
2771 | 3092 | 7.666623 | TCGTGCAATTCACATATTCTATAGGA | 58.333 | 34.615 | 0.00 | 0.00 | 45.92 | 2.94 |
2772 | 3093 | 7.889589 | TCGTGCAATTCACATATTCTATAGG | 57.110 | 36.000 | 0.00 | 0.00 | 45.92 | 2.57 |
2773 | 3094 | 8.929746 | ACATCGTGCAATTCACATATTCTATAG | 58.070 | 33.333 | 0.00 | 0.00 | 45.92 | 1.31 |
2774 | 3095 | 8.831715 | ACATCGTGCAATTCACATATTCTATA | 57.168 | 30.769 | 0.00 | 0.00 | 45.92 | 1.31 |
2775 | 3096 | 7.734924 | ACATCGTGCAATTCACATATTCTAT | 57.265 | 32.000 | 0.00 | 0.00 | 45.92 | 1.98 |
2776 | 3097 | 8.831715 | ATACATCGTGCAATTCACATATTCTA | 57.168 | 30.769 | 0.00 | 0.00 | 45.92 | 2.10 |
2777 | 3098 | 7.734924 | ATACATCGTGCAATTCACATATTCT | 57.265 | 32.000 | 0.00 | 0.00 | 45.92 | 2.40 |
2778 | 3099 | 7.149080 | GCAATACATCGTGCAATTCACATATTC | 60.149 | 37.037 | 0.00 | 0.00 | 45.92 | 1.75 |
2779 | 3100 | 6.638063 | GCAATACATCGTGCAATTCACATATT | 59.362 | 34.615 | 0.00 | 0.00 | 45.92 | 1.28 |
2780 | 3101 | 6.016860 | AGCAATACATCGTGCAATTCACATAT | 60.017 | 34.615 | 0.00 | 0.59 | 45.92 | 1.78 |
2781 | 3102 | 5.296531 | AGCAATACATCGTGCAATTCACATA | 59.703 | 36.000 | 0.00 | 0.00 | 45.92 | 2.29 |
2782 | 3103 | 4.096833 | AGCAATACATCGTGCAATTCACAT | 59.903 | 37.500 | 0.00 | 0.83 | 45.92 | 3.21 |
2783 | 3104 | 3.439825 | AGCAATACATCGTGCAATTCACA | 59.560 | 39.130 | 0.00 | 0.00 | 45.92 | 3.58 |
2784 | 3105 | 4.019919 | AGCAATACATCGTGCAATTCAC | 57.980 | 40.909 | 0.00 | 0.00 | 43.42 | 3.18 |
2785 | 3106 | 3.940852 | AGAGCAATACATCGTGCAATTCA | 59.059 | 39.130 | 0.00 | 0.00 | 43.42 | 2.57 |
2786 | 3107 | 4.521943 | GAGAGCAATACATCGTGCAATTC | 58.478 | 43.478 | 0.00 | 0.00 | 43.42 | 2.17 |
2787 | 3108 | 3.001634 | CGAGAGCAATACATCGTGCAATT | 59.998 | 43.478 | 0.00 | 0.00 | 43.42 | 2.32 |
2788 | 3109 | 2.541346 | CGAGAGCAATACATCGTGCAAT | 59.459 | 45.455 | 0.00 | 0.00 | 43.42 | 3.56 |
2789 | 3110 | 1.926510 | CGAGAGCAATACATCGTGCAA | 59.073 | 47.619 | 0.00 | 0.00 | 43.42 | 4.08 |
2790 | 3111 | 1.135112 | ACGAGAGCAATACATCGTGCA | 60.135 | 47.619 | 0.00 | 0.00 | 45.83 | 4.57 |
2791 | 3112 | 1.560923 | ACGAGAGCAATACATCGTGC | 58.439 | 50.000 | 0.00 | 0.00 | 45.83 | 5.34 |
2794 | 3115 | 1.559831 | TGCACGAGAGCAATACATCG | 58.440 | 50.000 | 0.00 | 0.00 | 42.46 | 3.84 |
2811 | 3132 | 7.200455 | TGTACATCATATATACGTGCCTATGC | 58.800 | 38.462 | 0.00 | 0.00 | 38.26 | 3.14 |
2812 | 3133 | 9.581099 | TTTGTACATCATATATACGTGCCTATG | 57.419 | 33.333 | 0.00 | 2.62 | 0.00 | 2.23 |
2813 | 3134 | 9.803315 | CTTTGTACATCATATATACGTGCCTAT | 57.197 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2814 | 3135 | 8.248253 | CCTTTGTACATCATATATACGTGCCTA | 58.752 | 37.037 | 0.00 | 0.00 | 0.00 | 3.93 |
2815 | 3136 | 7.097192 | CCTTTGTACATCATATATACGTGCCT | 58.903 | 38.462 | 0.00 | 0.00 | 0.00 | 4.75 |
2816 | 3137 | 6.872020 | ACCTTTGTACATCATATATACGTGCC | 59.128 | 38.462 | 0.00 | 0.00 | 0.00 | 5.01 |
2817 | 3138 | 7.148639 | CCACCTTTGTACATCATATATACGTGC | 60.149 | 40.741 | 0.00 | 0.00 | 0.00 | 5.34 |
2818 | 3139 | 7.330946 | CCCACCTTTGTACATCATATATACGTG | 59.669 | 40.741 | 0.00 | 0.00 | 0.00 | 4.49 |
2819 | 3140 | 7.383687 | CCCACCTTTGTACATCATATATACGT | 58.616 | 38.462 | 0.00 | 0.00 | 0.00 | 3.57 |
2820 | 3141 | 6.312918 | GCCCACCTTTGTACATCATATATACG | 59.687 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
2821 | 3142 | 6.598064 | GGCCCACCTTTGTACATCATATATAC | 59.402 | 42.308 | 0.00 | 0.00 | 0.00 | 1.47 |
2822 | 3143 | 6.273495 | TGGCCCACCTTTGTACATCATATATA | 59.727 | 38.462 | 0.00 | 0.00 | 36.63 | 0.86 |
2823 | 3144 | 5.074377 | TGGCCCACCTTTGTACATCATATAT | 59.926 | 40.000 | 0.00 | 0.00 | 36.63 | 0.86 |
2824 | 3145 | 4.413851 | TGGCCCACCTTTGTACATCATATA | 59.586 | 41.667 | 0.00 | 0.00 | 36.63 | 0.86 |
2825 | 3146 | 3.204158 | TGGCCCACCTTTGTACATCATAT | 59.796 | 43.478 | 0.00 | 0.00 | 36.63 | 1.78 |
2826 | 3147 | 2.578480 | TGGCCCACCTTTGTACATCATA | 59.422 | 45.455 | 0.00 | 0.00 | 36.63 | 2.15 |
2827 | 3148 | 1.357420 | TGGCCCACCTTTGTACATCAT | 59.643 | 47.619 | 0.00 | 0.00 | 36.63 | 2.45 |
2828 | 3149 | 0.774276 | TGGCCCACCTTTGTACATCA | 59.226 | 50.000 | 0.00 | 0.00 | 36.63 | 3.07 |
2829 | 3150 | 1.173913 | GTGGCCCACCTTTGTACATC | 58.826 | 55.000 | 1.17 | 0.00 | 36.63 | 3.06 |
2830 | 3151 | 0.608035 | CGTGGCCCACCTTTGTACAT | 60.608 | 55.000 | 8.62 | 0.00 | 36.63 | 2.29 |
2831 | 3152 | 1.228003 | CGTGGCCCACCTTTGTACA | 60.228 | 57.895 | 8.62 | 0.00 | 36.63 | 2.90 |
2832 | 3153 | 1.969589 | CCGTGGCCCACCTTTGTAC | 60.970 | 63.158 | 8.62 | 0.00 | 36.63 | 2.90 |
2833 | 3154 | 2.148052 | TCCGTGGCCCACCTTTGTA | 61.148 | 57.895 | 8.62 | 0.00 | 36.63 | 2.41 |
2834 | 3155 | 3.494254 | TCCGTGGCCCACCTTTGT | 61.494 | 61.111 | 8.62 | 0.00 | 36.63 | 2.83 |
2835 | 3156 | 2.983592 | GTCCGTGGCCCACCTTTG | 60.984 | 66.667 | 8.62 | 0.00 | 36.63 | 2.77 |
2836 | 3157 | 4.280019 | GGTCCGTGGCCCACCTTT | 62.280 | 66.667 | 8.62 | 0.00 | 36.63 | 3.11 |
2840 | 3161 | 3.948719 | TTGAGGTCCGTGGCCCAC | 61.949 | 66.667 | 2.98 | 2.98 | 0.00 | 4.61 |
2841 | 3162 | 3.948719 | GTTGAGGTCCGTGGCCCA | 61.949 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
2842 | 3163 | 1.623542 | ATAGTTGAGGTCCGTGGCCC | 61.624 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
2843 | 3164 | 1.117150 | TATAGTTGAGGTCCGTGGCC | 58.883 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2844 | 3165 | 1.479323 | TGTATAGTTGAGGTCCGTGGC | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
2845 | 3166 | 3.430374 | CCTTGTATAGTTGAGGTCCGTGG | 60.430 | 52.174 | 0.00 | 0.00 | 0.00 | 4.94 |
2846 | 3167 | 3.446161 | TCCTTGTATAGTTGAGGTCCGTG | 59.554 | 47.826 | 0.00 | 0.00 | 0.00 | 4.94 |
2847 | 3168 | 3.705051 | TCCTTGTATAGTTGAGGTCCGT | 58.295 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
2848 | 3169 | 4.159879 | AGTTCCTTGTATAGTTGAGGTCCG | 59.840 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2849 | 3170 | 5.678955 | AGTTCCTTGTATAGTTGAGGTCC | 57.321 | 43.478 | 0.00 | 0.00 | 0.00 | 4.46 |
2850 | 3171 | 6.606395 | TCCTAGTTCCTTGTATAGTTGAGGTC | 59.394 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
2851 | 3172 | 6.500336 | TCCTAGTTCCTTGTATAGTTGAGGT | 58.500 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2852 | 3173 | 6.041069 | CCTCCTAGTTCCTTGTATAGTTGAGG | 59.959 | 46.154 | 0.00 | 0.00 | 0.00 | 3.86 |
2853 | 3174 | 6.461788 | GCCTCCTAGTTCCTTGTATAGTTGAG | 60.462 | 46.154 | 0.00 | 0.00 | 0.00 | 3.02 |
2854 | 3175 | 5.363005 | GCCTCCTAGTTCCTTGTATAGTTGA | 59.637 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2855 | 3176 | 5.602628 | GCCTCCTAGTTCCTTGTATAGTTG | 58.397 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
2856 | 3177 | 4.341520 | CGCCTCCTAGTTCCTTGTATAGTT | 59.658 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
2857 | 3178 | 3.890147 | CGCCTCCTAGTTCCTTGTATAGT | 59.110 | 47.826 | 0.00 | 0.00 | 0.00 | 2.12 |
2858 | 3179 | 3.256136 | CCGCCTCCTAGTTCCTTGTATAG | 59.744 | 52.174 | 0.00 | 0.00 | 0.00 | 1.31 |
2859 | 3180 | 3.228453 | CCGCCTCCTAGTTCCTTGTATA | 58.772 | 50.000 | 0.00 | 0.00 | 0.00 | 1.47 |
2860 | 3181 | 2.040178 | CCGCCTCCTAGTTCCTTGTAT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
2861 | 3182 | 1.481871 | CCGCCTCCTAGTTCCTTGTA | 58.518 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2862 | 3183 | 1.265454 | CCCGCCTCCTAGTTCCTTGT | 61.265 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2863 | 3184 | 1.522569 | CCCGCCTCCTAGTTCCTTG | 59.477 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
2864 | 3185 | 2.368011 | GCCCGCCTCCTAGTTCCTT | 61.368 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
2865 | 3186 | 2.764547 | GCCCGCCTCCTAGTTCCT | 60.765 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2866 | 3187 | 3.862991 | GGCCCGCCTCCTAGTTCC | 61.863 | 72.222 | 0.00 | 0.00 | 0.00 | 3.62 |
2867 | 3188 | 3.862991 | GGGCCCGCCTCCTAGTTC | 61.863 | 72.222 | 5.69 | 0.00 | 36.10 | 3.01 |
2868 | 3189 | 4.733725 | TGGGCCCGCCTCCTAGTT | 62.734 | 66.667 | 19.37 | 0.00 | 36.10 | 2.24 |
2869 | 3190 | 2.615191 | TATTGGGCCCGCCTCCTAGT | 62.615 | 60.000 | 19.37 | 0.00 | 36.10 | 2.57 |
2870 | 3191 | 1.841556 | TATTGGGCCCGCCTCCTAG | 60.842 | 63.158 | 19.37 | 0.00 | 36.10 | 3.02 |
2871 | 3192 | 2.144738 | GTATTGGGCCCGCCTCCTA | 61.145 | 63.158 | 19.37 | 0.00 | 36.10 | 2.94 |
2872 | 3193 | 3.489513 | GTATTGGGCCCGCCTCCT | 61.490 | 66.667 | 19.37 | 0.00 | 36.10 | 3.69 |
2873 | 3194 | 3.804329 | TGTATTGGGCCCGCCTCC | 61.804 | 66.667 | 19.37 | 4.16 | 36.10 | 4.30 |
2874 | 3195 | 2.516225 | GTGTATTGGGCCCGCCTC | 60.516 | 66.667 | 19.37 | 8.62 | 36.10 | 4.70 |
2875 | 3196 | 2.223464 | ATTGTGTATTGGGCCCGCCT | 62.223 | 55.000 | 19.37 | 6.54 | 36.10 | 5.52 |
2876 | 3197 | 0.466555 | TATTGTGTATTGGGCCCGCC | 60.467 | 55.000 | 19.37 | 4.97 | 0.00 | 6.13 |
2877 | 3198 | 1.269448 | CATATTGTGTATTGGGCCCGC | 59.731 | 52.381 | 19.37 | 7.95 | 0.00 | 6.13 |
2878 | 3199 | 1.269448 | GCATATTGTGTATTGGGCCCG | 59.731 | 52.381 | 19.37 | 0.00 | 0.00 | 6.13 |
2879 | 3200 | 2.035832 | GTGCATATTGTGTATTGGGCCC | 59.964 | 50.000 | 17.59 | 17.59 | 0.00 | 5.80 |
2880 | 3201 | 2.692557 | TGTGCATATTGTGTATTGGGCC | 59.307 | 45.455 | 0.00 | 0.00 | 0.00 | 5.80 |
2881 | 3202 | 4.589216 | ATGTGCATATTGTGTATTGGGC | 57.411 | 40.909 | 0.00 | 0.00 | 0.00 | 5.36 |
2882 | 3203 | 6.917477 | GTGTTATGTGCATATTGTGTATTGGG | 59.083 | 38.462 | 0.00 | 0.00 | 0.00 | 4.12 |
2883 | 3204 | 7.479150 | TGTGTTATGTGCATATTGTGTATTGG | 58.521 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
2888 | 3209 | 9.559732 | AGTATATGTGTTATGTGCATATTGTGT | 57.440 | 29.630 | 0.00 | 0.00 | 37.15 | 3.72 |
2890 | 3211 | 9.777297 | TGAGTATATGTGTTATGTGCATATTGT | 57.223 | 29.630 | 0.00 | 0.00 | 37.15 | 2.71 |
2893 | 3214 | 9.777297 | TGTTGAGTATATGTGTTATGTGCATAT | 57.223 | 29.630 | 0.31 | 0.31 | 38.73 | 1.78 |
2894 | 3215 | 9.260002 | CTGTTGAGTATATGTGTTATGTGCATA | 57.740 | 33.333 | 0.00 | 0.00 | 0.00 | 3.14 |
2895 | 3216 | 7.254898 | GCTGTTGAGTATATGTGTTATGTGCAT | 60.255 | 37.037 | 0.00 | 0.00 | 0.00 | 3.96 |
2896 | 3217 | 6.037062 | GCTGTTGAGTATATGTGTTATGTGCA | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 4.57 |
2897 | 3218 | 6.258727 | AGCTGTTGAGTATATGTGTTATGTGC | 59.741 | 38.462 | 0.00 | 0.00 | 0.00 | 4.57 |
2898 | 3219 | 7.042456 | GGAGCTGTTGAGTATATGTGTTATGTG | 60.042 | 40.741 | 0.00 | 0.00 | 0.00 | 3.21 |
2899 | 3220 | 6.986817 | GGAGCTGTTGAGTATATGTGTTATGT | 59.013 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2900 | 3221 | 7.212976 | AGGAGCTGTTGAGTATATGTGTTATG | 58.787 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
2901 | 3222 | 7.366847 | AGGAGCTGTTGAGTATATGTGTTAT | 57.633 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2902 | 3223 | 6.791867 | AGGAGCTGTTGAGTATATGTGTTA | 57.208 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
2903 | 3224 | 5.683876 | AGGAGCTGTTGAGTATATGTGTT | 57.316 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
2904 | 3225 | 5.656859 | TGTAGGAGCTGTTGAGTATATGTGT | 59.343 | 40.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2905 | 3226 | 6.149129 | TGTAGGAGCTGTTGAGTATATGTG | 57.851 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
2906 | 3227 | 6.607600 | TCTTGTAGGAGCTGTTGAGTATATGT | 59.392 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2907 | 3228 | 7.043961 | TCTTGTAGGAGCTGTTGAGTATATG | 57.956 | 40.000 | 0.00 | 0.00 | 0.00 | 1.78 |
2908 | 3229 | 7.847711 | ATCTTGTAGGAGCTGTTGAGTATAT | 57.152 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
2909 | 3230 | 7.561722 | AGAATCTTGTAGGAGCTGTTGAGTATA | 59.438 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
2910 | 3231 | 6.382570 | AGAATCTTGTAGGAGCTGTTGAGTAT | 59.617 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
2911 | 3232 | 5.717178 | AGAATCTTGTAGGAGCTGTTGAGTA | 59.283 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2912 | 3233 | 4.530161 | AGAATCTTGTAGGAGCTGTTGAGT | 59.470 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2913 | 3234 | 5.083533 | AGAATCTTGTAGGAGCTGTTGAG | 57.916 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2914 | 3235 | 5.717178 | ACTAGAATCTTGTAGGAGCTGTTGA | 59.283 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2915 | 3236 | 5.971763 | ACTAGAATCTTGTAGGAGCTGTTG | 58.028 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
2916 | 3237 | 6.613153 | AACTAGAATCTTGTAGGAGCTGTT | 57.387 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2917 | 3238 | 6.613153 | AAACTAGAATCTTGTAGGAGCTGT | 57.387 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
2918 | 3239 | 5.746245 | CGAAACTAGAATCTTGTAGGAGCTG | 59.254 | 44.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2978 | 3299 | 7.006509 | CCACCTACATTTATGATTGGGAAGAT | 58.993 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
3047 | 3368 | 5.679601 | ACAAAAGCTCTCTCTGTTTCTTCT | 58.320 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
3134 | 3455 | 6.825610 | AGATTTGTTTGCCTTGGTATGAAAA | 58.174 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3135 | 3456 | 6.418057 | AGATTTGTTTGCCTTGGTATGAAA | 57.582 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3200 | 3521 | 6.484364 | AATCCCTTGACACTTGACAAAAAT | 57.516 | 33.333 | 0.00 | 0.00 | 30.22 | 1.82 |
3208 | 3529 | 1.962807 | TGGCAAATCCCTTGACACTTG | 59.037 | 47.619 | 0.00 | 0.00 | 46.64 | 3.16 |
3369 | 4008 | 8.630054 | ACAGCAAATTTAGATACCAGTAACAA | 57.370 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
3422 | 4061 | 5.416639 | TGCAAACATCATTCTGCTTCTGTAT | 59.583 | 36.000 | 0.00 | 0.00 | 35.78 | 2.29 |
3679 | 4318 | 3.083997 | GGGACAGCCATCCGGACT | 61.084 | 66.667 | 6.12 | 0.00 | 39.97 | 3.85 |
3835 | 4474 | 2.095461 | CTCCTGACAATCTCGTCCTGA | 58.905 | 52.381 | 0.00 | 0.00 | 34.88 | 3.86 |
3943 | 4582 | 0.391597 | TCGGAAGATGGCGGATTACC | 59.608 | 55.000 | 0.00 | 0.00 | 33.31 | 2.85 |
4025 | 4664 | 2.938451 | CACCTGCTGAGAAATTATCGCA | 59.062 | 45.455 | 6.87 | 6.87 | 36.37 | 5.10 |
4032 | 4671 | 0.957395 | CACGCCACCTGCTGAGAAAT | 60.957 | 55.000 | 0.00 | 0.00 | 38.05 | 2.17 |
4065 | 4704 | 4.066490 | CCAGGCAAAATTTCAAAGATGCA | 58.934 | 39.130 | 11.29 | 0.00 | 35.57 | 3.96 |
4148 | 4802 | 7.760794 | TGAATCATTTCCATTCATAGTGTTTGC | 59.239 | 33.333 | 0.00 | 0.00 | 35.71 | 3.68 |
4149 | 4803 | 9.642327 | TTGAATCATTTCCATTCATAGTGTTTG | 57.358 | 29.630 | 0.00 | 0.00 | 39.46 | 2.93 |
4152 | 4806 | 9.811995 | CAATTGAATCATTTCCATTCATAGTGT | 57.188 | 29.630 | 0.00 | 0.00 | 39.46 | 3.55 |
4153 | 4807 | 8.761497 | GCAATTGAATCATTTCCATTCATAGTG | 58.239 | 33.333 | 10.34 | 0.00 | 39.46 | 2.74 |
4154 | 4808 | 8.701895 | AGCAATTGAATCATTTCCATTCATAGT | 58.298 | 29.630 | 10.34 | 0.00 | 39.46 | 2.12 |
4155 | 4809 | 9.193133 | GAGCAATTGAATCATTTCCATTCATAG | 57.807 | 33.333 | 10.34 | 0.00 | 39.46 | 2.23 |
4156 | 4810 | 8.920174 | AGAGCAATTGAATCATTTCCATTCATA | 58.080 | 29.630 | 10.34 | 0.00 | 39.46 | 2.15 |
4157 | 4811 | 7.792032 | AGAGCAATTGAATCATTTCCATTCAT | 58.208 | 30.769 | 10.34 | 0.00 | 39.46 | 2.57 |
4158 | 4812 | 7.177832 | AGAGCAATTGAATCATTTCCATTCA | 57.822 | 32.000 | 10.34 | 0.00 | 38.27 | 2.57 |
4159 | 4813 | 8.488651 | AAAGAGCAATTGAATCATTTCCATTC | 57.511 | 30.769 | 10.34 | 0.00 | 27.71 | 2.67 |
4160 | 4814 | 8.857694 | AAAAGAGCAATTGAATCATTTCCATT | 57.142 | 26.923 | 10.34 | 0.00 | 29.69 | 3.16 |
4161 | 4815 | 7.277098 | CGAAAAGAGCAATTGAATCATTTCCAT | 59.723 | 33.333 | 22.45 | 4.58 | 30.69 | 3.41 |
4162 | 4816 | 6.587226 | CGAAAAGAGCAATTGAATCATTTCCA | 59.413 | 34.615 | 22.45 | 0.00 | 30.69 | 3.53 |
4163 | 4817 | 6.587608 | ACGAAAAGAGCAATTGAATCATTTCC | 59.412 | 34.615 | 22.45 | 13.00 | 30.69 | 3.13 |
4164 | 4818 | 7.411157 | CCACGAAAAGAGCAATTGAATCATTTC | 60.411 | 37.037 | 20.52 | 20.52 | 30.98 | 2.17 |
4165 | 4819 | 6.366877 | CCACGAAAAGAGCAATTGAATCATTT | 59.633 | 34.615 | 10.34 | 11.19 | 0.00 | 2.32 |
4211 | 4865 | 1.115467 | CAGTCGTCTCCTAGGCCATT | 58.885 | 55.000 | 5.01 | 0.00 | 0.00 | 3.16 |
4304 | 4958 | 2.216898 | GCACTAGCAATCTCATCACCC | 58.783 | 52.381 | 0.00 | 0.00 | 41.58 | 4.61 |
4388 | 5043 | 2.039879 | TGCATGAGATATCAGCTGGCAT | 59.960 | 45.455 | 15.13 | 7.30 | 0.00 | 4.40 |
4456 | 5113 | 0.925267 | CGTGCGCTGACAAGTTGTTG | 60.925 | 55.000 | 10.45 | 7.69 | 39.82 | 3.33 |
4565 | 5225 | 2.765689 | TTTGGTTTGGTCACCCTCAT | 57.234 | 45.000 | 0.00 | 0.00 | 35.73 | 2.90 |
4597 | 5257 | 2.633488 | AGCATTCTCTTTCGTTAGGGC | 58.367 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
4598 | 5258 | 3.375299 | CCAAGCATTCTCTTTCGTTAGGG | 59.625 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
4623 | 5283 | 3.482833 | GCGAACGTAGAAGCTCATAAGTC | 59.517 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
4644 | 5304 | 5.624081 | GCTTTACTTTTGAAAGTCGTAAGGC | 59.376 | 40.000 | 12.05 | 9.75 | 45.65 | 4.35 |
4683 | 5343 | 7.674471 | ACTTTTGAAAGTCATAAGGCTCTAC | 57.326 | 36.000 | 11.47 | 0.00 | 45.65 | 2.59 |
4684 | 5344 | 9.787435 | TTTACTTTTGAAAGTCATAAGGCTCTA | 57.213 | 29.630 | 12.05 | 0.00 | 45.65 | 2.43 |
4685 | 5345 | 8.691661 | TTTACTTTTGAAAGTCATAAGGCTCT | 57.308 | 30.769 | 12.05 | 0.00 | 45.65 | 4.09 |
4686 | 5346 | 7.539022 | GCTTTACTTTTGAAAGTCATAAGGCTC | 59.461 | 37.037 | 12.05 | 1.57 | 45.65 | 4.70 |
4687 | 5347 | 7.231519 | AGCTTTACTTTTGAAAGTCATAAGGCT | 59.768 | 33.333 | 12.05 | 14.20 | 45.65 | 4.58 |
4688 | 5348 | 7.371159 | AGCTTTACTTTTGAAAGTCATAAGGC | 58.629 | 34.615 | 12.05 | 12.51 | 45.65 | 4.35 |
4689 | 5349 | 9.827411 | GTAGCTTTACTTTTGAAAGTCATAAGG | 57.173 | 33.333 | 12.05 | 4.42 | 45.65 | 2.69 |
4722 | 5382 | 4.793201 | ACCTTGCTTGTCCTCTAGTTTTT | 58.207 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
4723 | 5383 | 4.103311 | AGACCTTGCTTGTCCTCTAGTTTT | 59.897 | 41.667 | 0.00 | 0.00 | 33.09 | 2.43 |
4724 | 5384 | 3.648545 | AGACCTTGCTTGTCCTCTAGTTT | 59.351 | 43.478 | 0.00 | 0.00 | 33.09 | 2.66 |
4725 | 5385 | 3.243724 | AGACCTTGCTTGTCCTCTAGTT | 58.756 | 45.455 | 0.00 | 0.00 | 33.09 | 2.24 |
4726 | 5386 | 2.896039 | AGACCTTGCTTGTCCTCTAGT | 58.104 | 47.619 | 0.00 | 0.00 | 33.09 | 2.57 |
4727 | 5387 | 4.382147 | GGTTAGACCTTGCTTGTCCTCTAG | 60.382 | 50.000 | 0.00 | 0.00 | 34.73 | 2.43 |
4749 | 5409 | 1.490910 | GACCTATCAACTCCCCCAAGG | 59.509 | 57.143 | 0.00 | 0.00 | 0.00 | 3.61 |
4750 | 5410 | 2.171448 | CAGACCTATCAACTCCCCCAAG | 59.829 | 54.545 | 0.00 | 0.00 | 0.00 | 3.61 |
4766 | 5426 | 6.577427 | GTGTCGATGAAAACAAAATACAGACC | 59.423 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
4783 | 5443 | 2.917933 | AGAGAGAGAGAGGTGTCGATG | 58.082 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
4787 | 5447 | 5.241506 | CCATGATTAGAGAGAGAGAGGTGTC | 59.758 | 48.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4854 | 5514 | 2.233305 | TCCTCCCTCAAGTGTAGACC | 57.767 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4860 | 5520 | 1.409427 | GGACGTATCCTCCCTCAAGTG | 59.591 | 57.143 | 0.00 | 0.00 | 42.45 | 3.16 |
4866 | 5526 | 2.320781 | CAAGATGGACGTATCCTCCCT | 58.679 | 52.381 | 0.00 | 0.00 | 46.43 | 4.20 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.