Multiple sequence alignment - TraesCS4B01G156200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G156200 chr4B 100.000 4295 0 0 1 4295 286073985 286069691 0.000000e+00 7932.0
1 TraesCS4B01G156200 chr4B 100.000 2249 0 0 4571 6819 286069415 286067167 0.000000e+00 4154.0
2 TraesCS4B01G156200 chr4B 97.230 361 8 2 3184 3542 472484067 472483707 1.630000e-170 610.0
3 TraesCS4B01G156200 chr4B 95.312 128 5 1 1957 2084 248168659 248168533 1.160000e-47 202.0
4 TraesCS4B01G156200 chr4B 97.701 87 2 0 3837 3923 472483709 472483623 4.260000e-32 150.0
5 TraesCS4B01G156200 chr4B 97.222 72 2 0 1406 1477 603516261 603516332 9.290000e-24 122.0
6 TraesCS4B01G156200 chr4B 98.529 68 1 0 1475 1542 603516273 603516340 3.340000e-23 121.0
7 TraesCS4B01G156200 chr4B 96.296 54 2 0 1351 1404 667862475 667862528 9.420000e-14 89.8
8 TraesCS4B01G156200 chr4B 88.406 69 6 2 1338 1404 580317557 580317625 1.580000e-11 82.4
9 TraesCS4B01G156200 chr4B 100.000 32 0 0 1620 1651 384839189 384839220 7.390000e-05 60.2
10 TraesCS4B01G156200 chr4D 95.759 2476 78 17 1829 4295 251526529 251528986 0.000000e+00 3965.0
11 TraesCS4B01G156200 chr4D 97.073 1230 28 7 5045 6269 251529801 251531027 0.000000e+00 2065.0
12 TraesCS4B01G156200 chr4D 93.021 874 24 11 501 1362 251525373 251526221 0.000000e+00 1242.0
13 TraesCS4B01G156200 chr4D 99.093 441 4 0 1 441 251524671 251525111 0.000000e+00 793.0
14 TraesCS4B01G156200 chr4D 95.177 311 14 1 4571 4881 251528997 251529306 2.210000e-134 490.0
15 TraesCS4B01G156200 chr4D 94.444 288 16 0 1544 1831 251526218 251526505 1.750000e-120 444.0
16 TraesCS4B01G156200 chr4D 96.682 211 7 0 6329 6539 251531035 251531245 1.090000e-92 351.0
17 TraesCS4B01G156200 chr4D 98.571 140 2 0 4926 5065 251529308 251529447 1.470000e-61 248.0
18 TraesCS4B01G156200 chr4D 92.248 129 10 0 1826 1954 371128244 371128372 4.200000e-42 183.0
19 TraesCS4B01G156200 chr4D 94.667 75 2 2 1402 1474 6599111 6599185 1.550000e-21 115.0
20 TraesCS4B01G156200 chr4D 97.015 67 1 1 6265 6330 309624620 309624554 2.010000e-20 111.0
21 TraesCS4B01G156200 chr4D 92.308 78 6 0 1475 1552 426582325 426582248 2.010000e-20 111.0
22 TraesCS4B01G156200 chr4D 94.366 71 4 0 1475 1545 164649526 164649456 7.230000e-20 110.0
23 TraesCS4B01G156200 chr4D 94.366 71 4 0 1475 1545 207559544 207559474 7.230000e-20 110.0
24 TraesCS4B01G156200 chr4D 95.522 67 2 1 6265 6330 204978615 204978681 9.350000e-19 106.0
25 TraesCS4B01G156200 chr4D 95.385 65 3 0 6265 6329 347485118 347485054 3.360000e-18 104.0
26 TraesCS4B01G156200 chr4D 92.857 70 3 2 6265 6332 17255539 17255608 4.350000e-17 100.0
27 TraesCS4B01G156200 chr4D 94.030 67 3 1 6265 6330 62823468 62823402 4.350000e-17 100.0
28 TraesCS4B01G156200 chr4D 93.846 65 3 1 6265 6328 436381020 436381084 5.630000e-16 97.1
29 TraesCS4B01G156200 chr4D 98.000 50 1 0 1356 1405 71301596 71301645 3.390000e-13 87.9
30 TraesCS4B01G156200 chr4D 96.226 53 2 0 1353 1405 341923530 341923478 3.390000e-13 87.9
31 TraesCS4B01G156200 chr4D 97.959 49 1 0 1356 1404 54412557 54412605 1.220000e-12 86.1
32 TraesCS4B01G156200 chr4D 93.220 59 1 3 1347 1404 72678668 72678724 4.380000e-12 84.2
33 TraesCS4B01G156200 chr4D 94.444 54 2 1 1352 1405 484424504 484424452 1.580000e-11 82.4
34 TraesCS4B01G156200 chr4D 88.710 62 5 2 1343 1404 473826032 473826091 2.640000e-09 75.0
35 TraesCS4B01G156200 chr4D 94.444 36 2 0 1616 1651 211044618 211044653 1.000000e-03 56.5
36 TraesCS4B01G156200 chr4A 95.599 2363 68 13 1956 4295 222560578 222562927 0.000000e+00 3755.0
37 TraesCS4B01G156200 chr4A 95.420 1703 67 7 4571 6269 222562937 222564632 0.000000e+00 2702.0
38 TraesCS4B01G156200 chr4A 93.622 1317 44 14 1 1308 222558529 222559814 0.000000e+00 1930.0
39 TraesCS4B01G156200 chr4A 92.470 332 23 2 1501 1831 222560012 222560342 2.230000e-129 473.0
40 TraesCS4B01G156200 chr4A 95.794 214 7 2 6329 6542 222564640 222564851 1.820000e-90 344.0
41 TraesCS4B01G156200 chr4A 87.879 132 16 0 3738 3869 394856302 394856433 9.160000e-34 156.0
42 TraesCS4B01G156200 chr4A 95.833 72 3 0 1471 1542 571438289 571438360 4.320000e-22 117.0
43 TraesCS4B01G156200 chr7B 97.571 741 17 1 3184 3923 383666872 383667612 0.000000e+00 1267.0
44 TraesCS4B01G156200 chr7B 88.333 120 12 2 1359 1477 60827055 60826937 7.130000e-30 143.0
45 TraesCS4B01G156200 chr7B 93.506 77 5 0 1475 1551 533547778 533547854 1.550000e-21 115.0
46 TraesCS4B01G156200 chr7B 88.889 90 10 0 1475 1564 723151808 723151719 2.010000e-20 111.0
47 TraesCS4B01G156200 chr7B 96.875 32 1 0 1620 1651 527618851 527618882 3.000000e-03 54.7
48 TraesCS4B01G156200 chr5B 96.667 360 11 1 3184 3542 221837839 221838198 1.270000e-166 597.0
49 TraesCS4B01G156200 chr5B 86.111 324 19 1 1657 1954 206999166 206999489 6.600000e-85 326.0
50 TraesCS4B01G156200 chr5B 92.473 186 12 2 1648 1831 32644589 32644774 1.460000e-66 265.0
51 TraesCS4B01G156200 chr5B 100.000 32 0 0 1620 1651 390869874 390869905 7.390000e-05 60.2
52 TraesCS4B01G156200 chr7A 90.943 265 20 1 1681 1945 202983931 202984191 3.030000e-93 353.0
53 TraesCS4B01G156200 chr7A 86.728 324 17 5 1657 1954 541461504 541461827 3.050000e-88 337.0
54 TraesCS4B01G156200 chr7A 86.293 321 18 3 1660 1954 724982060 724981740 6.600000e-85 326.0
55 TraesCS4B01G156200 chr7A 83.824 68 11 0 2114 2181 697119314 697119247 1.590000e-06 65.8
56 TraesCS4B01G156200 chr2A 86.604 321 17 5 1660 1954 260846703 260846383 1.420000e-86 331.0
57 TraesCS4B01G156200 chr2A 93.617 47 3 0 2136 2182 81788794 81788840 3.410000e-08 71.3
58 TraesCS4B01G156200 chr6D 86.293 321 18 5 1660 1954 158355829 158355509 6.600000e-85 326.0
59 TraesCS4B01G156200 chr6D 95.312 128 5 1 1957 2084 444005033 444005159 1.160000e-47 202.0
60 TraesCS4B01G156200 chr6D 92.248 129 10 0 1826 1954 91818505 91818377 4.200000e-42 183.0
61 TraesCS4B01G156200 chr6D 92.241 116 7 1 1359 1474 455306449 455306336 5.470000e-36 163.0
62 TraesCS4B01G156200 chr6D 87.402 127 8 2 1359 1477 431311897 431311771 9.220000e-29 139.0
63 TraesCS4B01G156200 chr6D 95.833 72 3 0 1406 1477 72228181 72228110 4.320000e-22 117.0
64 TraesCS4B01G156200 chr6D 97.059 68 2 0 6265 6332 50680049 50680116 1.550000e-21 115.0
65 TraesCS4B01G156200 chr6D 97.059 68 2 0 1475 1542 305130356 305130423 1.550000e-21 115.0
66 TraesCS4B01G156200 chr6D 97.059 68 2 0 1475 1542 391740589 391740656 1.550000e-21 115.0
67 TraesCS4B01G156200 chr6D 92.500 80 5 1 1475 1553 379809038 379808959 5.590000e-21 113.0
68 TraesCS4B01G156200 chr6D 95.652 69 3 0 1406 1474 2103644 2103712 2.010000e-20 111.0
69 TraesCS4B01G156200 chr6D 94.444 72 4 0 1406 1477 27179541 27179470 2.010000e-20 111.0
70 TraesCS4B01G156200 chr6D 95.652 69 3 0 1406 1474 305130344 305130412 2.010000e-20 111.0
71 TraesCS4B01G156200 chr6D 94.444 72 4 0 1406 1477 379809050 379808979 2.010000e-20 111.0
72 TraesCS4B01G156200 chr6D 95.652 69 3 0 1406 1474 391740577 391740645 2.010000e-20 111.0
73 TraesCS4B01G156200 chr6D 95.652 69 1 2 6265 6331 307046801 307046733 7.230000e-20 110.0
74 TraesCS4B01G156200 chr6D 95.522 67 3 0 1476 1542 385666062 385666128 2.600000e-19 108.0
75 TraesCS4B01G156200 chr6D 92.208 77 4 2 1400 1474 395840826 395840902 2.600000e-19 108.0
76 TraesCS4B01G156200 chr6D 93.056 72 5 0 1471 1542 2103652 2103723 9.350000e-19 106.0
77 TraesCS4B01G156200 chr6D 92.000 75 6 0 1471 1545 27179533 27179459 9.350000e-19 106.0
78 TraesCS4B01G156200 chr6D 90.244 82 6 2 1475 1556 155146795 155146874 9.350000e-19 106.0
79 TraesCS4B01G156200 chr6D 90.361 83 5 3 1395 1474 350223051 350223133 9.350000e-19 106.0
80 TraesCS4B01G156200 chr6D 93.056 72 5 0 1475 1546 439490719 439490790 9.350000e-19 106.0
81 TraesCS4B01G156200 chr6D 93.750 64 2 2 6265 6327 386225921 386225983 2.020000e-15 95.3
82 TraesCS4B01G156200 chr6D 97.917 48 1 0 1356 1403 197010620 197010667 4.380000e-12 84.2
83 TraesCS4B01G156200 chr6D 97.872 47 1 0 1359 1405 2103726 2103680 1.580000e-11 82.4
84 TraesCS4B01G156200 chr6D 97.872 47 1 0 1359 1405 27329277 27329323 1.580000e-11 82.4
85 TraesCS4B01G156200 chr6D 97.872 47 1 0 1359 1405 54235856 54235902 1.580000e-11 82.4
86 TraesCS4B01G156200 chr6D 97.872 47 1 0 1359 1405 81224677 81224723 1.580000e-11 82.4
87 TraesCS4B01G156200 chr6D 89.394 66 5 2 6265 6328 116948091 116948026 1.580000e-11 82.4
88 TraesCS4B01G156200 chr6D 96.000 50 2 0 1356 1405 119342097 119342048 1.580000e-11 82.4
89 TraesCS4B01G156200 chr6D 97.872 47 1 0 1359 1405 155146865 155146819 1.580000e-11 82.4
90 TraesCS4B01G156200 chr6D 86.842 76 6 3 6257 6328 202460414 202460489 1.580000e-11 82.4
91 TraesCS4B01G156200 chr6D 92.857 56 3 1 1348 1403 367864104 367864158 5.670000e-11 80.5
92 TraesCS4B01G156200 chr6D 87.879 66 6 2 6265 6328 433894852 433894787 7.330000e-10 76.8
93 TraesCS4B01G156200 chr6D 86.364 66 8 1 6265 6329 134700747 134700812 3.410000e-08 71.3
94 TraesCS4B01G156200 chr6D 86.154 65 3 1 6265 6329 243421746 243421688 1.590000e-06 65.8
95 TraesCS4B01G156200 chr6D 85.714 63 3 1 6265 6327 243447201 243447145 2.050000e-05 62.1
96 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 72226082 72226051 3.000000e-03 54.7
97 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 91818647 91818616 3.000000e-03 54.7
98 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 101309656 101309687 3.000000e-03 54.7
99 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 113506401 113506370 3.000000e-03 54.7
100 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 128897376 128897407 3.000000e-03 54.7
101 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 148555797 148555766 3.000000e-03 54.7
102 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 153191777 153191808 3.000000e-03 54.7
103 TraesCS4B01G156200 chr6D 96.875 32 1 0 1620 1651 221858718 221858749 3.000000e-03 54.7
104 TraesCS4B01G156200 chrUn 85.981 321 19 2 1660 1954 407616791 407616471 3.070000e-83 320.0
105 TraesCS4B01G156200 chrUn 81.366 322 30 6 1660 1954 407828561 407828243 1.140000e-57 235.0
106 TraesCS4B01G156200 chrUn 93.939 66 2 2 6267 6330 70146430 70146365 1.570000e-16 99.0
107 TraesCS4B01G156200 chrUn 96.154 52 1 1 1353 1404 100242109 100242059 4.380000e-12 84.2
108 TraesCS4B01G156200 chr6A 85.358 321 21 1 1660 1954 502321375 502321055 6.640000e-80 309.0
109 TraesCS4B01G156200 chr6A 98.333 120 2 0 1957 2076 595188622 595188503 1.930000e-50 211.0
110 TraesCS4B01G156200 chr6A 96.000 125 4 1 1957 2081 258136498 258136621 1.160000e-47 202.0
111 TraesCS4B01G156200 chr6A 87.879 132 16 0 3738 3869 279293846 279293977 9.160000e-34 156.0
112 TraesCS4B01G156200 chr6A 88.496 113 11 2 1351 1463 349637864 349637754 1.190000e-27 135.0
113 TraesCS4B01G156200 chr6A 97.059 34 1 0 1620 1653 178520256 178520289 2.660000e-04 58.4
114 TraesCS4B01G156200 chr3D 92.105 152 8 4 1398 1545 468977068 468976917 1.930000e-50 211.0
115 TraesCS4B01G156200 chr3D 96.094 128 4 1 1957 2084 326604797 326604671 2.490000e-49 207.0
116 TraesCS4B01G156200 chr3D 90.517 116 6 1 1359 1474 11463387 11463497 1.530000e-31 148.0
117 TraesCS4B01G156200 chr3D 93.421 76 5 0 1475 1550 43315891 43315816 5.590000e-21 113.0
118 TraesCS4B01G156200 chr3D 95.385 65 3 0 6265 6329 133100551 133100487 3.360000e-18 104.0
119 TraesCS4B01G156200 chr2D 96.094 128 4 1 1957 2084 363519506 363519380 2.490000e-49 207.0
120 TraesCS4B01G156200 chr2D 96.000 125 4 1 1957 2081 205214607 205214730 1.160000e-47 202.0
121 TraesCS4B01G156200 chr2D 96.053 76 2 1 1403 1477 481949703 481949778 9.290000e-24 122.0
122 TraesCS4B01G156200 chr2D 93.506 77 5 0 1475 1551 2461481 2461557 1.550000e-21 115.0
123 TraesCS4B01G156200 chr2D 93.421 76 4 1 1470 1545 540955348 540955274 2.010000e-20 111.0
124 TraesCS4B01G156200 chr2D 95.588 68 2 1 6264 6330 79336193 79336126 2.600000e-19 108.0
125 TraesCS4B01G156200 chr2D 88.636 88 8 2 1475 1560 5769017 5769104 9.350000e-19 106.0
126 TraesCS4B01G156200 chr2D 95.455 66 1 2 6265 6328 255810705 255810770 3.360000e-18 104.0
127 TraesCS4B01G156200 chr2D 91.489 47 4 0 2136 2182 409603302 409603256 1.590000e-06 65.8
128 TraesCS4B01G156200 chr2D 97.059 34 1 0 1620 1653 206697675 206697708 2.660000e-04 58.4
129 TraesCS4B01G156200 chr5D 93.023 129 9 0 1826 1954 451679084 451679212 9.030000e-44 189.0
130 TraesCS4B01G156200 chr5D 94.595 74 4 0 1475 1548 418431074 418431147 1.550000e-21 115.0
131 TraesCS4B01G156200 chr5D 94.521 73 4 0 1475 1547 430647611 430647539 5.590000e-21 113.0
132 TraesCS4B01G156200 chr5D 84.034 119 17 2 1359 1477 435519963 435519847 5.590000e-21 113.0
133 TraesCS4B01G156200 chr5D 94.521 73 3 1 1403 1474 275419640 275419712 2.010000e-20 111.0
134 TraesCS4B01G156200 chr5D 94.444 72 4 0 1406 1477 279315308 279315237 2.010000e-20 111.0
135 TraesCS4B01G156200 chr5D 93.421 76 4 1 1475 1549 459143481 459143556 2.010000e-20 111.0
136 TraesCS4B01G156200 chr5D 93.333 75 5 0 1475 1549 541864345 541864419 2.010000e-20 111.0
137 TraesCS4B01G156200 chr5D 93.151 73 3 2 6265 6336 463906946 463907017 9.350000e-19 106.0
138 TraesCS4B01G156200 chr5D 80.795 151 13 6 1406 1556 435519960 435519826 3.360000e-18 104.0
139 TraesCS4B01G156200 chr5D 95.385 65 2 1 6265 6328 97035051 97034987 1.210000e-17 102.0
140 TraesCS4B01G156200 chr5D 93.846 65 3 1 6263 6326 380529696 380529632 5.630000e-16 97.1
141 TraesCS4B01G156200 chr5D 98.000 50 1 0 1356 1405 507699307 507699258 3.390000e-13 87.9
142 TraesCS4B01G156200 chr5D 92.857 56 4 0 1345 1400 418431045 418431100 1.580000e-11 82.4
143 TraesCS4B01G156200 chr5D 85.507 69 8 2 2115 2182 278311307 278311374 3.410000e-08 71.3
144 TraesCS4B01G156200 chr5D 94.444 36 0 2 1616 1651 132144294 132144261 3.000000e-03 54.7
145 TraesCS4B01G156200 chr1B 93.023 129 9 0 1826 1954 537648112 537647984 9.030000e-44 189.0
146 TraesCS4B01G156200 chr1B 86.735 98 9 4 1475 1569 648097825 648097729 9.350000e-19 106.0
147 TraesCS4B01G156200 chr6B 88.333 120 6 3 1359 1477 5553639 5553751 3.320000e-28 137.0
148 TraesCS4B01G156200 chr6B 92.771 83 3 3 1397 1476 702688040 702688122 4.320000e-22 117.0
149 TraesCS4B01G156200 chr6B 93.590 78 3 2 1475 1552 550375774 550375699 1.550000e-21 115.0
150 TraesCS4B01G156200 chr6B 91.566 83 7 0 1471 1553 714919806 714919724 1.550000e-21 115.0
151 TraesCS4B01G156200 chr6B 92.105 76 3 2 6257 6329 594676799 594676874 3.360000e-18 104.0
152 TraesCS4B01G156200 chr6B 94.737 57 3 0 1349 1405 252247877 252247821 9.420000e-14 89.8
153 TraesCS4B01G156200 chr6B 85.246 61 5 3 2136 2194 239309764 239309706 7.390000e-05 60.2
154 TraesCS4B01G156200 chr6B 100.000 32 0 0 1620 1651 563991280 563991311 7.390000e-05 60.2
155 TraesCS4B01G156200 chr3A 87.395 119 13 1 1359 1477 550395338 550395222 1.190000e-27 135.0
156 TraesCS4B01G156200 chr3A 100.000 32 0 0 1620 1651 674276806 674276837 7.390000e-05 60.2
157 TraesCS4B01G156200 chr3A 90.909 44 2 1 1620 1663 492198011 492198052 2.660000e-04 58.4
158 TraesCS4B01G156200 chr7D 95.833 72 3 0 1406 1477 205150270 205150199 4.320000e-22 117.0
159 TraesCS4B01G156200 chr7D 88.506 87 9 1 1475 1561 505592807 505592722 3.360000e-18 104.0
160 TraesCS4B01G156200 chr7D 96.296 54 1 1 1350 1403 126019560 126019508 3.390000e-13 87.9
161 TraesCS4B01G156200 chr7D 94.545 55 3 0 1351 1405 163634820 163634766 1.220000e-12 86.1
162 TraesCS4B01G156200 chr7D 97.826 46 1 0 1359 1404 311853046 311853001 5.670000e-11 80.5
163 TraesCS4B01G156200 chr7D 90.385 52 5 0 2136 2187 478909856 478909805 1.230000e-07 69.4
164 TraesCS4B01G156200 chr7D 97.059 34 1 0 1620 1653 262826068 262826035 2.660000e-04 58.4
165 TraesCS4B01G156200 chr5A 91.765 85 6 1 1393 1477 618475237 618475154 4.320000e-22 117.0
166 TraesCS4B01G156200 chr5A 88.043 92 8 3 1471 1561 27744106 27744195 9.350000e-19 106.0
167 TraesCS4B01G156200 chr1D 97.101 69 2 0 1406 1474 27855790 27855858 4.320000e-22 117.0
168 TraesCS4B01G156200 chr1D 96.875 64 2 0 6265 6328 435751397 435751460 2.600000e-19 108.0
169 TraesCS4B01G156200 chr1D 91.892 74 4 2 6263 6335 112751337 112751409 1.210000e-17 102.0
170 TraesCS4B01G156200 chr1D 98.000 50 1 0 1356 1405 157615775 157615726 3.390000e-13 87.9
171 TraesCS4B01G156200 chr1D 98.000 50 1 0 1356 1405 407351091 407351140 3.390000e-13 87.9
172 TraesCS4B01G156200 chr1D 94.286 35 2 0 1620 1654 62191499 62191465 3.000000e-03 54.7
173 TraesCS4B01G156200 chr1A 91.566 83 5 2 1397 1477 436426945 436427027 5.590000e-21 113.0
174 TraesCS4B01G156200 chr1A 92.308 78 6 0 1471 1548 374579497 374579420 2.010000e-20 111.0
175 TraesCS4B01G156200 chr1A 97.059 34 1 0 1620 1653 283857388 283857355 2.660000e-04 58.4
176 TraesCS4B01G156200 chr2B 91.489 47 4 0 2136 2182 484608105 484608059 1.590000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G156200 chr4B 286067167 286073985 6818 True 6043.00 7932 100.0000 1 6819 2 chr4B.!!$R2 6818
1 TraesCS4B01G156200 chr4D 251524671 251531245 6574 False 1199.75 3965 96.2275 1 6539 8 chr4D.!!$F11 6538
2 TraesCS4B01G156200 chr4A 222558529 222564851 6322 False 1840.80 3755 94.5810 1 6542 5 chr4A.!!$F3 6541
3 TraesCS4B01G156200 chr7B 383666872 383667612 740 False 1267.00 1267 97.5710 3184 3923 1 chr7B.!!$F1 739

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
800 1003 0.654683 GGAGAATGTGATGCTGTCGC 59.345 55.000 0.00 0.00 37.86 5.19 F
841 1044 0.734889 GTGGTCAGATTTGATGGCGG 59.265 55.000 0.00 0.00 35.39 6.13 F
917 1120 1.082496 GCGTGTGCTTCAAGTCAGC 60.082 57.895 0.00 0.00 38.39 4.26 F
919 1122 1.159713 CGTGTGCTTCAAGTCAGCCA 61.160 55.000 0.00 0.00 36.33 4.75 F
920 1123 1.242076 GTGTGCTTCAAGTCAGCCAT 58.758 50.000 0.00 0.00 36.33 4.40 F
1881 2218 1.271597 GCTTCCATGGTTGACCTCACT 60.272 52.381 12.58 0.00 36.82 3.41 F
2474 2937 1.747355 CTGCCCCAGTCAAAGCTTATG 59.253 52.381 0.00 0.57 0.00 1.90 F
4184 4656 0.881796 GTTTGGCTACCTGACTTGCC 59.118 55.000 0.00 0.00 45.10 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1659 1970 1.017387 GGCGACATTGATGACTTCCC 58.983 55.000 0.00 0.00 0.00 3.97 R
2445 2908 1.168714 GACTGGGGCAGTAGCAAAAG 58.831 55.000 0.00 0.00 45.44 2.27 R
2897 3363 1.026584 CATTGAGATTGCGCCATCCA 58.973 50.000 17.16 12.09 0.00 3.41 R
2953 3419 1.203038 TGCCATGACATCACAAAGGGT 60.203 47.619 0.00 0.00 0.00 4.34 R
3995 4466 4.997395 TCAAGACAAGGTGAAGTAGATTGC 59.003 41.667 0.00 0.00 0.00 3.56 R
4184 4656 1.463674 AAATAGGCACGAAAGCAGGG 58.536 50.000 0.00 0.00 35.83 4.45 R
5078 5924 4.708421 AGGCAACATATTTCAGAGCACAAT 59.292 37.500 0.00 0.00 41.41 2.71 R
6761 7614 0.034198 TCTTTCCACGGATGTTCGCA 59.966 50.000 0.00 0.00 0.00 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 4.794439 CGTCGTGCAGCATCCCGA 62.794 66.667 0.00 0.00 0.00 5.14
508 711 2.047179 AGAAAACGGAGCGAGGGC 60.047 61.111 0.00 0.00 40.37 5.19
539 742 1.000612 AGGAGACGGGAGAGGGTTC 59.999 63.158 0.00 0.00 0.00 3.62
800 1003 0.654683 GGAGAATGTGATGCTGTCGC 59.345 55.000 0.00 0.00 37.86 5.19
841 1044 0.734889 GTGGTCAGATTTGATGGCGG 59.265 55.000 0.00 0.00 35.39 6.13
914 1117 2.551270 CCGCGTGTGCTTCAAGTC 59.449 61.111 4.92 0.00 39.65 3.01
916 1119 1.202568 CGCGTGTGCTTCAAGTCAG 59.797 57.895 0.00 0.00 39.65 3.51
917 1120 1.082496 GCGTGTGCTTCAAGTCAGC 60.082 57.895 0.00 0.00 38.39 4.26
918 1121 1.571460 CGTGTGCTTCAAGTCAGCC 59.429 57.895 0.00 0.00 36.33 4.85
919 1122 1.159713 CGTGTGCTTCAAGTCAGCCA 61.160 55.000 0.00 0.00 36.33 4.75
920 1123 1.242076 GTGTGCTTCAAGTCAGCCAT 58.758 50.000 0.00 0.00 36.33 4.40
939 1154 3.634448 CCATTCTCTCTCTCTCGCCTTTA 59.366 47.826 0.00 0.00 0.00 1.85
1212 1427 3.984732 GCCAGGTGCCTTCCCCTT 61.985 66.667 0.00 0.00 0.00 3.95
1215 1430 2.941583 AGGTGCCTTCCCCTTCCC 60.942 66.667 0.00 0.00 0.00 3.97
1216 1431 4.062032 GGTGCCTTCCCCTTCCCC 62.062 72.222 0.00 0.00 0.00 4.81
1217 1432 4.062032 GTGCCTTCCCCTTCCCCC 62.062 72.222 0.00 0.00 0.00 5.40
1218 1433 4.301662 TGCCTTCCCCTTCCCCCT 62.302 66.667 0.00 0.00 0.00 4.79
1219 1434 3.421386 GCCTTCCCCTTCCCCCTC 61.421 72.222 0.00 0.00 0.00 4.30
1220 1435 2.696504 CCTTCCCCTTCCCCCTCC 60.697 72.222 0.00 0.00 0.00 4.30
1221 1436 2.696504 CTTCCCCTTCCCCCTCCC 60.697 72.222 0.00 0.00 0.00 4.30
1222 1437 4.381121 TTCCCCTTCCCCCTCCCC 62.381 72.222 0.00 0.00 0.00 4.81
1225 1440 4.845307 CCCTTCCCCCTCCCCCTC 62.845 77.778 0.00 0.00 0.00 4.30
1226 1441 4.845307 CCTTCCCCCTCCCCCTCC 62.845 77.778 0.00 0.00 0.00 4.30
1227 1442 4.845307 CTTCCCCCTCCCCCTCCC 62.845 77.778 0.00 0.00 0.00 4.30
1316 1627 3.130633 TGCGTGCAAGTACATCATATCC 58.869 45.455 0.59 0.00 0.00 2.59
1337 1648 3.814283 CCATGATTTGGTTTGGTTGTTGG 59.186 43.478 0.00 0.00 40.99 3.77
1343 1654 4.993029 TTGGTTTGGTTGTTGGTTCTAG 57.007 40.909 0.00 0.00 0.00 2.43
1370 1681 6.040616 CAGTCTTATGTATTACTCCCTCCGTT 59.959 42.308 0.00 0.00 0.00 4.44
1379 1690 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1380 1691 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1383 1694 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1385 1696 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
1386 1697 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
1387 1698 3.521937 TCCGTTCCAAAATAGATGACCCT 59.478 43.478 0.00 0.00 0.00 4.34
1388 1699 4.717778 TCCGTTCCAAAATAGATGACCCTA 59.282 41.667 0.00 0.00 0.00 3.53
1389 1700 4.814771 CCGTTCCAAAATAGATGACCCTAC 59.185 45.833 0.00 0.00 0.00 3.18
1390 1701 5.396436 CCGTTCCAAAATAGATGACCCTACT 60.396 44.000 0.00 0.00 0.00 2.57
1391 1702 6.113411 CGTTCCAAAATAGATGACCCTACTT 58.887 40.000 0.00 0.00 0.00 2.24
1392 1703 6.598064 CGTTCCAAAATAGATGACCCTACTTT 59.402 38.462 0.00 0.00 0.00 2.66
1393 1704 7.414098 CGTTCCAAAATAGATGACCCTACTTTG 60.414 40.741 0.00 0.00 36.30 2.77
1394 1705 7.027874 TCCAAAATAGATGACCCTACTTTGT 57.972 36.000 0.00 0.00 35.36 2.83
1395 1706 8.153221 TCCAAAATAGATGACCCTACTTTGTA 57.847 34.615 0.00 0.00 35.36 2.41
1396 1707 8.044908 TCCAAAATAGATGACCCTACTTTGTAC 58.955 37.037 0.00 0.00 35.36 2.90
1397 1708 8.047310 CCAAAATAGATGACCCTACTTTGTACT 58.953 37.037 0.00 0.00 35.36 2.73
1401 1712 9.490083 AATAGATGACCCTACTTTGTACTAACT 57.510 33.333 0.00 0.00 0.00 2.24
1402 1713 7.793948 AGATGACCCTACTTTGTACTAACTT 57.206 36.000 0.00 0.00 0.00 2.66
1403 1714 8.203681 AGATGACCCTACTTTGTACTAACTTT 57.796 34.615 0.00 0.00 0.00 2.66
1404 1715 9.317827 AGATGACCCTACTTTGTACTAACTTTA 57.682 33.333 0.00 0.00 0.00 1.85
1407 1718 8.534496 TGACCCTACTTTGTACTAACTTTATCC 58.466 37.037 0.00 0.00 0.00 2.59
1408 1719 7.855375 ACCCTACTTTGTACTAACTTTATCCC 58.145 38.462 0.00 0.00 0.00 3.85
1409 1720 7.681598 ACCCTACTTTGTACTAACTTTATCCCT 59.318 37.037 0.00 0.00 0.00 4.20
1410 1721 8.202811 CCCTACTTTGTACTAACTTTATCCCTC 58.797 40.741 0.00 0.00 0.00 4.30
1411 1722 8.979534 CCTACTTTGTACTAACTTTATCCCTCT 58.020 37.037 0.00 0.00 0.00 3.69
1412 1723 9.804758 CTACTTTGTACTAACTTTATCCCTCTG 57.195 37.037 0.00 0.00 0.00 3.35
1413 1724 8.203681 ACTTTGTACTAACTTTATCCCTCTGT 57.796 34.615 0.00 0.00 0.00 3.41
1414 1725 8.657712 ACTTTGTACTAACTTTATCCCTCTGTT 58.342 33.333 0.00 0.00 0.00 3.16
1415 1726 9.503399 CTTTGTACTAACTTTATCCCTCTGTTT 57.497 33.333 0.00 0.00 0.00 2.83
1416 1727 9.498176 TTTGTACTAACTTTATCCCTCTGTTTC 57.502 33.333 0.00 0.00 0.00 2.78
1417 1728 8.197592 TGTACTAACTTTATCCCTCTGTTTCA 57.802 34.615 0.00 0.00 0.00 2.69
1418 1729 8.653191 TGTACTAACTTTATCCCTCTGTTTCAA 58.347 33.333 0.00 0.00 0.00 2.69
1419 1730 9.498176 GTACTAACTTTATCCCTCTGTTTCAAA 57.502 33.333 0.00 0.00 0.00 2.69
1420 1731 8.990163 ACTAACTTTATCCCTCTGTTTCAAAA 57.010 30.769 0.00 0.00 0.00 2.44
1421 1732 9.588096 ACTAACTTTATCCCTCTGTTTCAAAAT 57.412 29.630 0.00 0.00 0.00 1.82
1424 1735 9.807921 AACTTTATCCCTCTGTTTCAAAATAGA 57.192 29.630 2.56 2.56 35.32 1.98
1425 1736 9.981460 ACTTTATCCCTCTGTTTCAAAATAGAT 57.019 29.630 2.91 0.00 35.92 1.98
1427 1738 9.973661 TTTATCCCTCTGTTTCAAAATAGATGA 57.026 29.630 2.91 4.11 35.92 2.92
1429 1740 8.688747 ATCCCTCTGTTTCAAAATAGATGATC 57.311 34.615 2.91 0.00 35.92 2.92
1430 1741 7.056635 TCCCTCTGTTTCAAAATAGATGATCC 58.943 38.462 2.91 0.00 35.92 3.36
1431 1742 6.830324 CCCTCTGTTTCAAAATAGATGATCCA 59.170 38.462 2.91 0.00 35.92 3.41
1474 1785 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
1498 1809 9.739276 TGAAAATAGATGATCCAACTTTGTACT 57.261 29.630 0.00 0.00 0.00 2.73
1531 1842 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
1542 1853 7.413446 AGTCATCTATTTTGAAATGGAGGGAA 58.587 34.615 12.38 0.00 38.91 3.97
1575 1886 8.692110 TTAATTCTATGCATGCTTGTTTTCAG 57.308 30.769 20.33 5.88 0.00 3.02
1581 1892 2.313234 CATGCTTGTTTTCAGAGCGTG 58.687 47.619 2.81 2.81 40.56 5.34
1584 1895 1.334149 GCTTGTTTTCAGAGCGTGACC 60.334 52.381 0.00 0.00 33.71 4.02
1658 1969 9.730705 CTTGATGAGGGTAATGTACATCATATT 57.269 33.333 9.23 0.00 43.91 1.28
1659 1970 9.506018 TTGATGAGGGTAATGTACATCATATTG 57.494 33.333 9.23 0.00 43.91 1.90
1690 2001 2.183478 ATGTCGCCATCACTTGTTCA 57.817 45.000 0.00 0.00 0.00 3.18
1704 2015 2.937469 TGTTCAAACACTTGGCACAG 57.063 45.000 0.00 0.00 34.47 3.66
1740 2051 3.795101 GTCCTTGATGACGGTAATGTACG 59.205 47.826 0.00 0.00 0.00 3.67
1831 2142 9.388506 CTTCTCCAAGTCAATGAACACTATATT 57.611 33.333 0.00 0.00 0.00 1.28
1872 2209 3.008266 CCAAGAAAATGGCTTCCATGGTT 59.992 43.478 12.58 0.00 44.40 3.67
1881 2218 1.271597 GCTTCCATGGTTGACCTCACT 60.272 52.381 12.58 0.00 36.82 3.41
1896 2233 2.564062 CCTCACTGGCATGAAACCAAAT 59.436 45.455 0.00 0.00 36.56 2.32
1897 2234 3.367703 CCTCACTGGCATGAAACCAAATC 60.368 47.826 0.00 0.00 36.56 2.17
1921 2258 6.072230 TCGATTTTTGGTCATGCTTGTCATTA 60.072 34.615 0.00 0.00 31.79 1.90
1945 2282 4.973168 TCTTAAGTGGTGCTCAATGACTT 58.027 39.130 1.63 0.00 0.00 3.01
1947 2284 5.827797 TCTTAAGTGGTGCTCAATGACTTTT 59.172 36.000 1.63 0.00 0.00 2.27
1972 2394 3.139025 CCATCTACAAGGGGGATGTTCAT 59.861 47.826 0.00 0.00 36.18 2.57
2089 2511 5.067936 TGTGACCAAAACATTAATTCCACGT 59.932 36.000 0.00 0.00 0.00 4.49
2123 2546 1.925255 TCCTGGGGCTTTTGATCAGAT 59.075 47.619 0.00 0.00 0.00 2.90
2134 2557 5.448654 CTTTTGATCAGATGGTGGGGAATA 58.551 41.667 0.00 0.00 0.00 1.75
2144 2593 5.723887 AGATGGTGGGGAATATAGATGAGAC 59.276 44.000 0.00 0.00 0.00 3.36
2145 2594 3.832490 TGGTGGGGAATATAGATGAGACG 59.168 47.826 0.00 0.00 0.00 4.18
2146 2595 3.833070 GGTGGGGAATATAGATGAGACGT 59.167 47.826 0.00 0.00 0.00 4.34
2147 2596 5.014858 GGTGGGGAATATAGATGAGACGTA 58.985 45.833 0.00 0.00 0.00 3.57
2148 2597 5.479375 GGTGGGGAATATAGATGAGACGTAA 59.521 44.000 0.00 0.00 0.00 3.18
2149 2598 6.154706 GGTGGGGAATATAGATGAGACGTAAT 59.845 42.308 0.00 0.00 0.00 1.89
2150 2599 7.310485 GGTGGGGAATATAGATGAGACGTAATT 60.310 40.741 0.00 0.00 0.00 1.40
2151 2600 8.746530 GTGGGGAATATAGATGAGACGTAATTA 58.253 37.037 0.00 0.00 0.00 1.40
2152 2601 9.316594 TGGGGAATATAGATGAGACGTAATTAA 57.683 33.333 0.00 0.00 0.00 1.40
2184 2633 8.843885 TCTAGATGAGAATTAGCAAATCCATG 57.156 34.615 0.00 0.00 0.00 3.66
2308 2771 5.645067 CACAGTTGAGATCTTATGGCTTGAA 59.355 40.000 0.00 0.00 0.00 2.69
2433 2896 3.450457 GTGTTTTGGGATGGCCATCATAA 59.550 43.478 39.50 30.57 39.54 1.90
2434 2897 4.081198 GTGTTTTGGGATGGCCATCATAAA 60.081 41.667 39.50 33.37 39.54 1.40
2445 2908 5.486526 TGGCCATCATAAATTGTTTTCACC 58.513 37.500 0.00 0.00 0.00 4.02
2474 2937 1.747355 CTGCCCCAGTCAAAGCTTATG 59.253 52.381 0.00 0.57 0.00 1.90
2783 3249 8.668353 TGAACAGCATGAAAGAAGTATATGAAC 58.332 33.333 0.00 0.00 39.69 3.18
2897 3363 8.284945 ACTGCTGTTATTCATGTGAATACAAT 57.715 30.769 13.48 0.00 44.13 2.71
3517 3988 5.106908 GCTTCAGAACAAGATCAAGGTACAC 60.107 44.000 0.00 0.00 0.00 2.90
4050 4522 4.794762 GGTGAACGTTGTTAAACCTTTCAC 59.205 41.667 5.00 15.69 45.07 3.18
4176 4648 2.621526 CTGTTTTTCCGTTTGGCTACCT 59.378 45.455 0.00 0.00 34.14 3.08
4184 4656 0.881796 GTTTGGCTACCTGACTTGCC 59.118 55.000 0.00 0.00 45.10 4.52
4632 5104 7.762588 TGGATAATGGTCCGTTCTTTTTAAA 57.237 32.000 0.00 0.00 41.35 1.52
4639 5111 6.788243 TGGTCCGTTCTTTTTAAACTTTCTC 58.212 36.000 0.00 0.00 0.00 2.87
4817 5289 3.272581 AGCTCGTTAGTCAGTCTAGGAC 58.727 50.000 0.00 0.00 35.50 3.85
4874 5346 8.747471 TGATTGTGCATCTTATGTGGATTTTTA 58.253 29.630 0.00 0.00 32.34 1.52
5165 6014 9.991906 CTAAATGCCCAAAAGATAATCATGATT 57.008 29.630 23.75 23.75 34.93 2.57
5458 6309 1.075374 TCACTTGGCTTGGCAATAGGT 59.925 47.619 9.96 2.73 0.00 3.08
5580 6431 7.903145 TCTTGTACTTGTCAGTTACCATATGT 58.097 34.615 1.24 0.00 34.06 2.29
5617 6468 4.191544 GCTCCTTGCATACTGTCAATGTA 58.808 43.478 0.00 0.00 42.31 2.29
5714 6565 0.251653 TACTCGGGACAAGAGGCAGT 60.252 55.000 0.00 0.00 0.00 4.40
5755 6606 2.634940 GCCTAGCCTAGATGGACATGAA 59.365 50.000 0.00 0.00 38.35 2.57
5775 6626 4.280929 TGAACGTAGGATATCACCATCCAG 59.719 45.833 4.83 0.00 46.04 3.86
5805 6656 0.472471 GGTCCACCAGTTGACAGGAA 59.528 55.000 4.61 0.00 35.64 3.36
5828 6679 1.817099 CCAACCTGATCTCGCTGGC 60.817 63.158 0.00 0.00 0.00 4.85
5829 6680 1.220206 CAACCTGATCTCGCTGGCT 59.780 57.895 0.00 0.00 0.00 4.75
5842 6693 1.454201 GCTGGCTCCTAAAGGTTCAC 58.546 55.000 0.00 0.00 36.34 3.18
5919 6770 5.178623 TGTTGATGTGTCGTTTCCTTCATAC 59.821 40.000 0.00 0.00 0.00 2.39
5952 6803 8.102676 TGAGATGAATTTCAGTTCTACAATCCA 58.897 33.333 5.21 0.00 0.00 3.41
5956 6807 8.812513 TGAATTTCAGTTCTACAATCCATGAT 57.187 30.769 0.00 0.00 0.00 2.45
6018 6869 7.490000 ACTATGTTTTCTAGAATAGGTCGGTG 58.510 38.462 5.89 0.00 39.78 4.94
6197 7050 4.630940 GCAAGAGCATCATATTCTCTAGGC 59.369 45.833 0.00 0.00 41.58 3.93
6247 7100 4.089361 AGTCTAAGGGCCTTTTTGATTGG 58.911 43.478 26.29 0.00 0.00 3.16
6269 7122 4.459337 GGAAGGATTTCCGTTGAATCTTGT 59.541 41.667 0.00 0.00 43.27 3.16
6271 7124 6.403309 GGAAGGATTTCCGTTGAATCTTGTAC 60.403 42.308 0.00 0.00 43.27 2.90
6273 7126 6.180472 AGGATTTCCGTTGAATCTTGTACAT 58.820 36.000 0.00 0.00 42.08 2.29
6274 7127 7.335627 AGGATTTCCGTTGAATCTTGTACATA 58.664 34.615 0.00 0.00 42.08 2.29
6276 7129 8.621286 GGATTTCCGTTGAATCTTGTACATATT 58.379 33.333 0.00 0.00 34.65 1.28
6279 7132 9.834628 TTTCCGTTGAATCTTGTACATATTTTC 57.165 29.630 0.00 0.00 0.00 2.29
6280 7133 8.786826 TCCGTTGAATCTTGTACATATTTTCT 57.213 30.769 0.00 0.00 0.00 2.52
6281 7134 8.879759 TCCGTTGAATCTTGTACATATTTTCTC 58.120 33.333 0.00 0.00 0.00 2.87
6282 7135 8.883731 CCGTTGAATCTTGTACATATTTTCTCT 58.116 33.333 0.00 0.00 0.00 3.10
6283 7136 9.907576 CGTTGAATCTTGTACATATTTTCTCTC 57.092 33.333 0.00 0.00 0.00 3.20
6303 7156 8.380743 TCTCTCTTCTATAAAGCTAAGGTACG 57.619 38.462 0.00 0.00 0.00 3.67
6304 7157 7.992033 TCTCTCTTCTATAAAGCTAAGGTACGT 59.008 37.037 0.00 0.00 0.00 3.57
6305 7158 8.152309 TCTCTTCTATAAAGCTAAGGTACGTC 57.848 38.462 0.00 0.00 0.00 4.34
6306 7159 7.992033 TCTCTTCTATAAAGCTAAGGTACGTCT 59.008 37.037 0.00 0.00 0.00 4.18
6307 7160 8.517062 TCTTCTATAAAGCTAAGGTACGTCTT 57.483 34.615 0.00 0.00 0.00 3.01
6308 7161 8.964772 TCTTCTATAAAGCTAAGGTACGTCTTT 58.035 33.333 0.00 0.00 0.00 2.52
6309 7162 8.922058 TTCTATAAAGCTAAGGTACGTCTTTG 57.078 34.615 0.00 0.00 0.00 2.77
6310 7163 7.486647 TCTATAAAGCTAAGGTACGTCTTTGG 58.513 38.462 0.00 0.00 0.00 3.28
6311 7164 2.381725 AGCTAAGGTACGTCTTTGGC 57.618 50.000 0.00 0.45 39.24 4.52
6312 7165 0.997196 GCTAAGGTACGTCTTTGGCG 59.003 55.000 0.00 0.00 31.23 5.69
6313 7166 1.670967 GCTAAGGTACGTCTTTGGCGT 60.671 52.381 2.22 2.22 45.11 5.68
6314 7167 2.415893 GCTAAGGTACGTCTTTGGCGTA 60.416 50.000 0.00 0.10 42.85 4.42
6318 7171 2.657297 TACGTCTTTGGCGTACCCT 58.343 52.632 0.00 0.00 42.85 4.34
6319 7172 0.527565 TACGTCTTTGGCGTACCCTC 59.472 55.000 0.00 0.00 42.85 4.30
6320 7173 1.290955 CGTCTTTGGCGTACCCTCA 59.709 57.895 2.61 0.00 33.59 3.86
6321 7174 0.320073 CGTCTTTGGCGTACCCTCAA 60.320 55.000 2.61 0.00 33.59 3.02
6322 7175 1.874739 CGTCTTTGGCGTACCCTCAAA 60.875 52.381 2.61 3.29 33.59 2.69
6323 7176 2.223745 GTCTTTGGCGTACCCTCAAAA 58.776 47.619 2.61 0.00 33.59 2.44
6324 7177 2.619646 GTCTTTGGCGTACCCTCAAAAA 59.380 45.455 2.61 0.00 33.59 1.94
6408 7261 1.076923 ACGACGGCTACCTCCTGAT 60.077 57.895 0.00 0.00 0.00 2.90
6499 7352 3.685139 TGACAGAACCTCAACTCCATC 57.315 47.619 0.00 0.00 0.00 3.51
6532 7385 0.449388 AGTACTCGGTTAAGACGGCG 59.551 55.000 4.80 4.80 0.00 6.46
6565 7418 3.709567 GGGCAGTCCGGAAGTAGT 58.290 61.111 5.23 0.00 0.00 2.73
6566 7419 1.980844 GGGCAGTCCGGAAGTAGTT 59.019 57.895 5.23 0.00 0.00 2.24
6567 7420 0.323957 GGGCAGTCCGGAAGTAGTTT 59.676 55.000 5.23 0.00 0.00 2.66
6568 7421 1.551883 GGGCAGTCCGGAAGTAGTTTA 59.448 52.381 5.23 0.00 0.00 2.01
6569 7422 2.169978 GGGCAGTCCGGAAGTAGTTTAT 59.830 50.000 5.23 0.00 0.00 1.40
6570 7423 3.195661 GGCAGTCCGGAAGTAGTTTATG 58.804 50.000 5.23 0.00 0.00 1.90
6571 7424 2.608090 GCAGTCCGGAAGTAGTTTATGC 59.392 50.000 5.23 1.94 0.00 3.14
6572 7425 2.858344 CAGTCCGGAAGTAGTTTATGCG 59.142 50.000 5.23 0.00 0.00 4.73
6574 7427 0.935196 CCGGAAGTAGTTTATGCGGC 59.065 55.000 0.00 0.00 41.08 6.53
6575 7428 1.472728 CCGGAAGTAGTTTATGCGGCT 60.473 52.381 0.00 0.00 41.08 5.52
6576 7429 1.859080 CGGAAGTAGTTTATGCGGCTC 59.141 52.381 0.00 0.00 0.00 4.70
6577 7430 2.737359 CGGAAGTAGTTTATGCGGCTCA 60.737 50.000 0.00 0.00 0.00 4.26
6578 7431 3.267483 GGAAGTAGTTTATGCGGCTCAA 58.733 45.455 0.00 0.00 0.00 3.02
6579 7432 3.687698 GGAAGTAGTTTATGCGGCTCAAA 59.312 43.478 0.00 0.00 0.00 2.69
6580 7433 4.335594 GGAAGTAGTTTATGCGGCTCAAAT 59.664 41.667 0.00 0.00 0.00 2.32
6581 7434 5.163652 GGAAGTAGTTTATGCGGCTCAAATT 60.164 40.000 0.00 1.24 0.00 1.82
6582 7435 5.485662 AGTAGTTTATGCGGCTCAAATTC 57.514 39.130 0.00 0.00 0.00 2.17
6583 7436 4.941263 AGTAGTTTATGCGGCTCAAATTCA 59.059 37.500 0.00 0.00 0.00 2.57
6584 7437 4.096732 AGTTTATGCGGCTCAAATTCAC 57.903 40.909 0.00 0.00 0.00 3.18
6585 7438 3.505680 AGTTTATGCGGCTCAAATTCACA 59.494 39.130 0.00 0.00 0.00 3.58
6586 7439 4.158394 AGTTTATGCGGCTCAAATTCACAT 59.842 37.500 0.00 0.00 0.00 3.21
6587 7440 4.717233 TTATGCGGCTCAAATTCACATT 57.283 36.364 0.00 0.00 0.00 2.71
6588 7441 2.350899 TGCGGCTCAAATTCACATTG 57.649 45.000 0.00 0.00 0.00 2.82
6589 7442 0.994263 GCGGCTCAAATTCACATTGC 59.006 50.000 0.00 0.00 0.00 3.56
6590 7443 1.261989 CGGCTCAAATTCACATTGCG 58.738 50.000 0.00 0.00 0.00 4.85
6591 7444 1.401409 CGGCTCAAATTCACATTGCGT 60.401 47.619 0.00 0.00 0.00 5.24
6592 7445 2.676076 GGCTCAAATTCACATTGCGTT 58.324 42.857 0.00 0.00 0.00 4.84
6593 7446 3.059166 GGCTCAAATTCACATTGCGTTT 58.941 40.909 0.00 0.00 0.00 3.60
6594 7447 3.120923 GGCTCAAATTCACATTGCGTTTG 60.121 43.478 0.00 0.00 0.00 2.93
6595 7448 3.490526 GCTCAAATTCACATTGCGTTTGT 59.509 39.130 0.00 0.00 32.97 2.83
6596 7449 4.025813 GCTCAAATTCACATTGCGTTTGTT 60.026 37.500 0.00 0.00 32.97 2.83
6597 7450 5.502220 GCTCAAATTCACATTGCGTTTGTTT 60.502 36.000 0.00 0.00 32.97 2.83
6598 7451 6.414408 TCAAATTCACATTGCGTTTGTTTT 57.586 29.167 0.00 0.00 32.97 2.43
6599 7452 6.835914 TCAAATTCACATTGCGTTTGTTTTT 58.164 28.000 0.00 0.00 32.97 1.94
6600 7453 7.963981 TCAAATTCACATTGCGTTTGTTTTTA 58.036 26.923 0.00 0.00 32.97 1.52
6601 7454 8.607459 TCAAATTCACATTGCGTTTGTTTTTAT 58.393 25.926 0.00 0.00 32.97 1.40
6602 7455 8.881231 CAAATTCACATTGCGTTTGTTTTTATC 58.119 29.630 0.00 0.00 0.00 1.75
6603 7456 7.945033 ATTCACATTGCGTTTGTTTTTATCT 57.055 28.000 0.00 0.00 0.00 1.98
6604 7457 6.984740 TCACATTGCGTTTGTTTTTATCTC 57.015 33.333 0.00 0.00 0.00 2.75
6605 7458 6.734137 TCACATTGCGTTTGTTTTTATCTCT 58.266 32.000 0.00 0.00 0.00 3.10
6606 7459 7.199766 TCACATTGCGTTTGTTTTTATCTCTT 58.800 30.769 0.00 0.00 0.00 2.85
6607 7460 7.167302 TCACATTGCGTTTGTTTTTATCTCTTG 59.833 33.333 0.00 0.00 0.00 3.02
6608 7461 5.881637 TTGCGTTTGTTTTTATCTCTTGC 57.118 34.783 0.00 0.00 0.00 4.01
6609 7462 4.295051 TGCGTTTGTTTTTATCTCTTGCC 58.705 39.130 0.00 0.00 0.00 4.52
6610 7463 3.673338 GCGTTTGTTTTTATCTCTTGCCC 59.327 43.478 0.00 0.00 0.00 5.36
6611 7464 4.558697 GCGTTTGTTTTTATCTCTTGCCCT 60.559 41.667 0.00 0.00 0.00 5.19
6612 7465 4.917415 CGTTTGTTTTTATCTCTTGCCCTG 59.083 41.667 0.00 0.00 0.00 4.45
6613 7466 5.507315 CGTTTGTTTTTATCTCTTGCCCTGT 60.507 40.000 0.00 0.00 0.00 4.00
6614 7467 6.293735 CGTTTGTTTTTATCTCTTGCCCTGTA 60.294 38.462 0.00 0.00 0.00 2.74
6615 7468 7.574967 CGTTTGTTTTTATCTCTTGCCCTGTAT 60.575 37.037 0.00 0.00 0.00 2.29
6616 7469 8.736244 GTTTGTTTTTATCTCTTGCCCTGTATA 58.264 33.333 0.00 0.00 0.00 1.47
6617 7470 9.474313 TTTGTTTTTATCTCTTGCCCTGTATAT 57.526 29.630 0.00 0.00 0.00 0.86
6618 7471 9.474313 TTGTTTTTATCTCTTGCCCTGTATATT 57.526 29.630 0.00 0.00 0.00 1.28
6619 7472 9.474313 TGTTTTTATCTCTTGCCCTGTATATTT 57.526 29.630 0.00 0.00 0.00 1.40
6620 7473 9.736023 GTTTTTATCTCTTGCCCTGTATATTTG 57.264 33.333 0.00 0.00 0.00 2.32
6621 7474 8.463930 TTTTATCTCTTGCCCTGTATATTTGG 57.536 34.615 0.00 0.00 0.00 3.28
6622 7475 5.653255 ATCTCTTGCCCTGTATATTTGGT 57.347 39.130 0.00 0.00 0.00 3.67
6623 7476 5.450818 TCTCTTGCCCTGTATATTTGGTT 57.549 39.130 0.00 0.00 0.00 3.67
6624 7477 5.192927 TCTCTTGCCCTGTATATTTGGTTG 58.807 41.667 0.00 0.00 0.00 3.77
6625 7478 5.045213 TCTCTTGCCCTGTATATTTGGTTGA 60.045 40.000 0.00 0.00 0.00 3.18
6626 7479 5.575157 TCTTGCCCTGTATATTTGGTTGAA 58.425 37.500 0.00 0.00 0.00 2.69
6627 7480 6.013379 TCTTGCCCTGTATATTTGGTTGAAA 58.987 36.000 0.00 0.00 0.00 2.69
6628 7481 6.667414 TCTTGCCCTGTATATTTGGTTGAAAT 59.333 34.615 0.00 0.00 37.96 2.17
6629 7482 6.463995 TGCCCTGTATATTTGGTTGAAATC 57.536 37.500 0.00 0.00 35.74 2.17
6630 7483 6.194235 TGCCCTGTATATTTGGTTGAAATCT 58.806 36.000 0.00 0.00 35.74 2.40
6631 7484 6.321181 TGCCCTGTATATTTGGTTGAAATCTC 59.679 38.462 0.00 0.00 35.74 2.75
6632 7485 6.239036 GCCCTGTATATTTGGTTGAAATCTCC 60.239 42.308 0.00 0.00 35.74 3.71
6633 7486 6.265422 CCCTGTATATTTGGTTGAAATCTCCC 59.735 42.308 0.00 0.00 35.74 4.30
6634 7487 6.833416 CCTGTATATTTGGTTGAAATCTCCCA 59.167 38.462 0.00 0.00 35.74 4.37
6635 7488 7.506938 CCTGTATATTTGGTTGAAATCTCCCAT 59.493 37.037 0.00 0.00 35.74 4.00
6636 7489 8.463930 TGTATATTTGGTTGAAATCTCCCATC 57.536 34.615 0.00 0.00 35.74 3.51
6637 7490 8.058235 TGTATATTTGGTTGAAATCTCCCATCA 58.942 33.333 0.00 0.00 35.74 3.07
6638 7491 5.665916 ATTTGGTTGAAATCTCCCATCAC 57.334 39.130 0.00 0.00 26.83 3.06
6639 7492 2.710377 TGGTTGAAATCTCCCATCACG 58.290 47.619 0.00 0.00 0.00 4.35
6640 7493 2.304470 TGGTTGAAATCTCCCATCACGA 59.696 45.455 0.00 0.00 0.00 4.35
6641 7494 2.678336 GGTTGAAATCTCCCATCACGAC 59.322 50.000 0.00 0.00 0.00 4.34
6642 7495 2.678336 GTTGAAATCTCCCATCACGACC 59.322 50.000 0.00 0.00 0.00 4.79
6643 7496 1.209504 TGAAATCTCCCATCACGACCC 59.790 52.381 0.00 0.00 0.00 4.46
6644 7497 1.209504 GAAATCTCCCATCACGACCCA 59.790 52.381 0.00 0.00 0.00 4.51
6645 7498 1.511613 AATCTCCCATCACGACCCAT 58.488 50.000 0.00 0.00 0.00 4.00
6646 7499 1.511613 ATCTCCCATCACGACCCATT 58.488 50.000 0.00 0.00 0.00 3.16
6647 7500 1.285280 TCTCCCATCACGACCCATTT 58.715 50.000 0.00 0.00 0.00 2.32
6648 7501 1.065491 TCTCCCATCACGACCCATTTG 60.065 52.381 0.00 0.00 0.00 2.32
6649 7502 0.988063 TCCCATCACGACCCATTTGA 59.012 50.000 0.00 0.00 0.00 2.69
6650 7503 1.094785 CCCATCACGACCCATTTGAC 58.905 55.000 0.00 0.00 0.00 3.18
6651 7504 1.612991 CCCATCACGACCCATTTGACA 60.613 52.381 0.00 0.00 0.00 3.58
6652 7505 1.468520 CCATCACGACCCATTTGACAC 59.531 52.381 0.00 0.00 0.00 3.67
6653 7506 1.468520 CATCACGACCCATTTGACACC 59.531 52.381 0.00 0.00 0.00 4.16
6654 7507 0.470341 TCACGACCCATTTGACACCA 59.530 50.000 0.00 0.00 0.00 4.17
6655 7508 0.874390 CACGACCCATTTGACACCAG 59.126 55.000 0.00 0.00 0.00 4.00
6656 7509 0.889186 ACGACCCATTTGACACCAGC 60.889 55.000 0.00 0.00 0.00 4.85
6657 7510 0.888736 CGACCCATTTGACACCAGCA 60.889 55.000 0.00 0.00 0.00 4.41
6658 7511 1.327303 GACCCATTTGACACCAGCAA 58.673 50.000 0.00 0.00 0.00 3.91
6659 7512 1.895131 GACCCATTTGACACCAGCAAT 59.105 47.619 0.00 0.00 0.00 3.56
6660 7513 2.299867 GACCCATTTGACACCAGCAATT 59.700 45.455 0.00 0.00 0.00 2.32
6661 7514 2.037511 ACCCATTTGACACCAGCAATTG 59.962 45.455 0.00 0.00 0.00 2.32
6671 7524 2.600470 CCAGCAATTGGTTTGTGTGT 57.400 45.000 7.57 0.00 42.41 3.72
6672 7525 2.203401 CCAGCAATTGGTTTGTGTGTG 58.797 47.619 7.57 0.00 42.41 3.82
6673 7526 2.159128 CCAGCAATTGGTTTGTGTGTGA 60.159 45.455 7.57 0.00 42.41 3.58
6674 7527 3.117794 CAGCAATTGGTTTGTGTGTGAG 58.882 45.455 7.57 0.00 37.65 3.51
6675 7528 3.023119 AGCAATTGGTTTGTGTGTGAGA 58.977 40.909 3.82 0.00 37.65 3.27
6676 7529 3.446873 AGCAATTGGTTTGTGTGTGAGAA 59.553 39.130 3.82 0.00 37.65 2.87
6677 7530 3.798337 GCAATTGGTTTGTGTGTGAGAAG 59.202 43.478 7.72 0.00 37.65 2.85
6678 7531 3.715628 ATTGGTTTGTGTGTGAGAAGC 57.284 42.857 0.00 0.00 0.00 3.86
6679 7532 2.418368 TGGTTTGTGTGTGAGAAGCT 57.582 45.000 0.00 0.00 0.00 3.74
6680 7533 2.288666 TGGTTTGTGTGTGAGAAGCTC 58.711 47.619 0.00 0.00 0.00 4.09
6681 7534 1.261619 GGTTTGTGTGTGAGAAGCTCG 59.738 52.381 0.00 0.00 32.35 5.03
6682 7535 1.261619 GTTTGTGTGTGAGAAGCTCGG 59.738 52.381 0.00 0.00 32.35 4.63
6683 7536 0.880278 TTGTGTGTGAGAAGCTCGGC 60.880 55.000 0.00 0.00 32.35 5.54
6684 7537 1.300931 GTGTGTGAGAAGCTCGGCA 60.301 57.895 0.00 0.00 32.35 5.69
6685 7538 0.880278 GTGTGTGAGAAGCTCGGCAA 60.880 55.000 0.00 0.00 32.35 4.52
6686 7539 0.179059 TGTGTGAGAAGCTCGGCAAA 60.179 50.000 0.00 0.00 32.35 3.68
6687 7540 0.944386 GTGTGAGAAGCTCGGCAAAA 59.056 50.000 0.00 0.00 32.35 2.44
6688 7541 1.069636 GTGTGAGAAGCTCGGCAAAAG 60.070 52.381 0.00 0.00 32.35 2.27
6689 7542 1.202639 TGTGAGAAGCTCGGCAAAAGA 60.203 47.619 0.00 0.00 32.35 2.52
6690 7543 1.873591 GTGAGAAGCTCGGCAAAAGAA 59.126 47.619 0.00 0.00 32.35 2.52
6691 7544 2.485814 GTGAGAAGCTCGGCAAAAGAAT 59.514 45.455 0.00 0.00 32.35 2.40
6692 7545 2.744202 TGAGAAGCTCGGCAAAAGAATC 59.256 45.455 0.00 0.00 32.35 2.52
6693 7546 2.744202 GAGAAGCTCGGCAAAAGAATCA 59.256 45.455 0.00 0.00 0.00 2.57
6694 7547 3.350833 AGAAGCTCGGCAAAAGAATCAT 58.649 40.909 0.00 0.00 0.00 2.45
6695 7548 3.376546 AGAAGCTCGGCAAAAGAATCATC 59.623 43.478 0.00 0.00 0.00 2.92
6696 7549 2.996631 AGCTCGGCAAAAGAATCATCT 58.003 42.857 0.00 0.00 37.57 2.90
6712 7565 9.447157 AAGAATCATCTTTTCTAGAAGAGGTTG 57.553 33.333 19.81 17.11 43.43 3.77
6713 7566 8.601546 AGAATCATCTTTTCTAGAAGAGGTTGT 58.398 33.333 19.81 4.29 38.90 3.32
6714 7567 9.877178 GAATCATCTTTTCTAGAAGAGGTTGTA 57.123 33.333 19.81 3.98 38.90 2.41
6715 7568 9.883142 AATCATCTTTTCTAGAAGAGGTTGTAG 57.117 33.333 19.81 4.55 38.90 2.74
6716 7569 7.841956 TCATCTTTTCTAGAAGAGGTTGTAGG 58.158 38.462 19.81 5.39 38.90 3.18
6717 7570 6.607004 TCTTTTCTAGAAGAGGTTGTAGGG 57.393 41.667 19.81 0.00 31.71 3.53
6718 7571 4.820894 TTTCTAGAAGAGGTTGTAGGGC 57.179 45.455 5.12 0.00 31.71 5.19
6719 7572 2.748388 TCTAGAAGAGGTTGTAGGGCC 58.252 52.381 0.00 0.00 31.71 5.80
6720 7573 2.043939 TCTAGAAGAGGTTGTAGGGCCA 59.956 50.000 6.18 0.00 31.71 5.36
6721 7574 1.972588 AGAAGAGGTTGTAGGGCCAT 58.027 50.000 6.18 0.00 0.00 4.40
6722 7575 3.130734 AGAAGAGGTTGTAGGGCCATA 57.869 47.619 6.18 0.00 0.00 2.74
6723 7576 2.772515 AGAAGAGGTTGTAGGGCCATAC 59.227 50.000 20.60 20.60 0.00 2.39
6724 7577 2.263895 AGAGGTTGTAGGGCCATACA 57.736 50.000 25.71 25.71 33.88 2.29
6725 7578 1.838077 AGAGGTTGTAGGGCCATACAC 59.162 52.381 28.91 21.76 35.44 2.90
6726 7579 0.539986 AGGTTGTAGGGCCATACACG 59.460 55.000 28.91 0.00 35.44 4.49
6727 7580 0.463116 GGTTGTAGGGCCATACACGG 60.463 60.000 28.91 0.00 35.44 4.94
6728 7581 0.251073 GTTGTAGGGCCATACACGGT 59.749 55.000 28.91 0.00 35.44 4.83
6729 7582 0.985760 TTGTAGGGCCATACACGGTT 59.014 50.000 28.91 0.00 35.44 4.44
6730 7583 0.250793 TGTAGGGCCATACACGGTTG 59.749 55.000 25.71 0.00 30.76 3.77
6731 7584 0.251073 GTAGGGCCATACACGGTTGT 59.749 55.000 22.31 0.00 40.02 3.32
6732 7585 1.481772 GTAGGGCCATACACGGTTGTA 59.518 52.381 22.31 0.00 42.53 2.41
6733 7586 0.985760 AGGGCCATACACGGTTGTAA 59.014 50.000 6.18 0.00 41.64 2.41
6734 7587 1.065709 AGGGCCATACACGGTTGTAAG 60.066 52.381 6.18 0.00 41.64 2.34
6735 7588 0.730840 GGCCATACACGGTTGTAAGC 59.269 55.000 0.00 0.00 41.64 3.09
6736 7589 1.677820 GGCCATACACGGTTGTAAGCT 60.678 52.381 0.00 0.00 41.64 3.74
6737 7590 2.081462 GCCATACACGGTTGTAAGCTT 58.919 47.619 3.48 3.48 41.64 3.74
6738 7591 3.264104 GCCATACACGGTTGTAAGCTTA 58.736 45.455 0.86 0.86 41.64 3.09
6739 7592 3.685756 GCCATACACGGTTGTAAGCTTAA 59.314 43.478 7.99 0.00 41.64 1.85
6740 7593 4.154556 GCCATACACGGTTGTAAGCTTAAA 59.845 41.667 7.99 0.00 41.64 1.52
6741 7594 5.672819 GCCATACACGGTTGTAAGCTTAAAG 60.673 44.000 7.99 0.96 41.64 1.85
6742 7595 5.163794 CCATACACGGTTGTAAGCTTAAAGG 60.164 44.000 7.99 0.00 41.64 3.11
6743 7596 3.812262 ACACGGTTGTAAGCTTAAAGGT 58.188 40.909 7.99 0.00 32.60 3.50
6744 7597 3.562557 ACACGGTTGTAAGCTTAAAGGTG 59.437 43.478 7.99 13.78 32.60 4.00
6745 7598 3.058501 CACGGTTGTAAGCTTAAAGGTGG 60.059 47.826 7.99 0.00 0.00 4.61
6746 7599 2.095415 CGGTTGTAAGCTTAAAGGTGGC 60.095 50.000 7.99 0.00 0.00 5.01
6747 7600 3.154710 GGTTGTAAGCTTAAAGGTGGCT 58.845 45.455 7.99 0.00 37.99 4.75
6748 7601 3.190744 GGTTGTAAGCTTAAAGGTGGCTC 59.809 47.826 7.99 0.00 35.06 4.70
6749 7602 4.072839 GTTGTAAGCTTAAAGGTGGCTCT 58.927 43.478 7.99 0.00 35.06 4.09
6750 7603 3.674997 TGTAAGCTTAAAGGTGGCTCTG 58.325 45.455 7.99 0.00 35.06 3.35
6751 7604 1.539157 AAGCTTAAAGGTGGCTCTGC 58.461 50.000 0.00 0.00 35.06 4.26
6752 7605 0.401738 AGCTTAAAGGTGGCTCTGCA 59.598 50.000 0.00 0.00 0.00 4.41
6753 7606 0.807496 GCTTAAAGGTGGCTCTGCAG 59.193 55.000 7.63 7.63 0.00 4.41
6754 7607 1.457346 CTTAAAGGTGGCTCTGCAGG 58.543 55.000 15.13 5.82 0.00 4.85
6755 7608 0.609131 TTAAAGGTGGCTCTGCAGGC 60.609 55.000 15.13 15.77 45.76 4.85
6761 7614 2.274760 GGCTCTGCAGGCAAGGAT 59.725 61.111 23.05 0.00 44.88 3.24
6762 7615 2.119655 GGCTCTGCAGGCAAGGATG 61.120 63.158 23.05 3.90 44.88 3.51
6776 7629 4.513519 GATGCGAACATCCGTGGA 57.486 55.556 0.00 0.00 45.94 4.02
6777 7630 2.762360 GATGCGAACATCCGTGGAA 58.238 52.632 0.00 0.00 45.94 3.53
6778 7631 1.083489 GATGCGAACATCCGTGGAAA 58.917 50.000 0.00 0.00 45.94 3.13
6779 7632 1.062587 GATGCGAACATCCGTGGAAAG 59.937 52.381 0.00 0.00 45.94 2.62
6780 7633 0.034198 TGCGAACATCCGTGGAAAGA 59.966 50.000 0.00 0.00 0.00 2.52
6781 7634 0.442699 GCGAACATCCGTGGAAAGAC 59.557 55.000 0.00 0.00 0.00 3.01
6782 7635 1.790755 CGAACATCCGTGGAAAGACA 58.209 50.000 0.00 0.00 0.00 3.41
6783 7636 2.139917 CGAACATCCGTGGAAAGACAA 58.860 47.619 0.00 0.00 0.00 3.18
6784 7637 2.546368 CGAACATCCGTGGAAAGACAAA 59.454 45.455 0.00 0.00 0.00 2.83
6785 7638 3.002862 CGAACATCCGTGGAAAGACAAAA 59.997 43.478 0.00 0.00 0.00 2.44
6786 7639 3.982576 ACATCCGTGGAAAGACAAAAC 57.017 42.857 0.00 0.00 0.00 2.43
6787 7640 3.551846 ACATCCGTGGAAAGACAAAACT 58.448 40.909 0.00 0.00 0.00 2.66
6788 7641 3.564225 ACATCCGTGGAAAGACAAAACTC 59.436 43.478 0.00 0.00 0.00 3.01
6789 7642 2.206750 TCCGTGGAAAGACAAAACTCG 58.793 47.619 0.00 0.00 0.00 4.18
6790 7643 1.263217 CCGTGGAAAGACAAAACTCGG 59.737 52.381 0.00 0.00 0.00 4.63
6791 7644 2.206750 CGTGGAAAGACAAAACTCGGA 58.793 47.619 0.00 0.00 0.00 4.55
6792 7645 2.610374 CGTGGAAAGACAAAACTCGGAA 59.390 45.455 0.00 0.00 0.00 4.30
6793 7646 3.303132 CGTGGAAAGACAAAACTCGGAAG 60.303 47.826 0.00 0.00 0.00 3.46
6794 7647 2.616842 TGGAAAGACAAAACTCGGAAGC 59.383 45.455 0.00 0.00 0.00 3.86
6795 7648 2.031069 GGAAAGACAAAACTCGGAAGCC 60.031 50.000 0.00 0.00 0.00 4.35
6796 7649 2.341846 AAGACAAAACTCGGAAGCCA 57.658 45.000 0.00 0.00 0.00 4.75
6797 7650 2.341846 AGACAAAACTCGGAAGCCAA 57.658 45.000 0.00 0.00 0.00 4.52
6798 7651 2.650322 AGACAAAACTCGGAAGCCAAA 58.350 42.857 0.00 0.00 0.00 3.28
6799 7652 3.020984 AGACAAAACTCGGAAGCCAAAA 58.979 40.909 0.00 0.00 0.00 2.44
6800 7653 3.636764 AGACAAAACTCGGAAGCCAAAAT 59.363 39.130 0.00 0.00 0.00 1.82
6801 7654 3.716601 ACAAAACTCGGAAGCCAAAATG 58.283 40.909 0.00 0.00 0.00 2.32
6802 7655 3.132111 ACAAAACTCGGAAGCCAAAATGT 59.868 39.130 0.00 0.00 0.00 2.71
6803 7656 4.119136 CAAAACTCGGAAGCCAAAATGTT 58.881 39.130 0.00 0.00 0.00 2.71
6804 7657 3.369546 AACTCGGAAGCCAAAATGTTG 57.630 42.857 0.00 0.00 34.25 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
460 461 4.332543 TCTCACTTCCCCGCCCCT 62.333 66.667 0.00 0.00 0.00 4.79
463 464 4.475135 GCCTCTCACTTCCCCGCC 62.475 72.222 0.00 0.00 0.00 6.13
464 465 4.821589 CGCCTCTCACTTCCCCGC 62.822 72.222 0.00 0.00 0.00 6.13
465 466 3.068691 TCGCCTCTCACTTCCCCG 61.069 66.667 0.00 0.00 0.00 5.73
466 467 2.726351 CCTCGCCTCTCACTTCCCC 61.726 68.421 0.00 0.00 0.00 4.81
467 468 1.258445 TTCCTCGCCTCTCACTTCCC 61.258 60.000 0.00 0.00 0.00 3.97
468 469 0.174617 CTTCCTCGCCTCTCACTTCC 59.825 60.000 0.00 0.00 0.00 3.46
469 470 1.134175 CTCTTCCTCGCCTCTCACTTC 59.866 57.143 0.00 0.00 0.00 3.01
470 471 1.181786 CTCTTCCTCGCCTCTCACTT 58.818 55.000 0.00 0.00 0.00 3.16
471 472 0.682855 CCTCTTCCTCGCCTCTCACT 60.683 60.000 0.00 0.00 0.00 3.41
475 476 0.333312 TTCTCCTCTTCCTCGCCTCT 59.667 55.000 0.00 0.00 0.00 3.69
508 711 2.285180 CTCCTCCCCTCCCCTGAG 59.715 72.222 0.00 0.00 38.42 3.35
780 983 1.293924 CGACAGCATCACATTCTCCC 58.706 55.000 0.00 0.00 0.00 4.30
914 1117 1.269206 GCGAGAGAGAGAGAATGGCTG 60.269 57.143 0.00 0.00 0.00 4.85
916 1119 0.031994 GGCGAGAGAGAGAGAATGGC 59.968 60.000 0.00 0.00 0.00 4.40
917 1120 1.691196 AGGCGAGAGAGAGAGAATGG 58.309 55.000 0.00 0.00 0.00 3.16
918 1121 3.799281 AAAGGCGAGAGAGAGAGAATG 57.201 47.619 0.00 0.00 0.00 2.67
919 1122 4.532834 ACTAAAGGCGAGAGAGAGAGAAT 58.467 43.478 0.00 0.00 0.00 2.40
920 1123 3.958018 ACTAAAGGCGAGAGAGAGAGAA 58.042 45.455 0.00 0.00 0.00 2.87
999 1214 2.514592 CTGCGGTACCTGGCCATG 60.515 66.667 5.51 6.06 0.00 3.66
1216 1431 4.825679 GAGGGTGGGAGGGGGAGG 62.826 77.778 0.00 0.00 0.00 4.30
1217 1432 4.825679 GGAGGGTGGGAGGGGGAG 62.826 77.778 0.00 0.00 0.00 4.30
1226 1441 3.006728 TTACGGCTGGGAGGGTGG 61.007 66.667 0.00 0.00 0.00 4.61
1227 1442 2.240162 GAGTTACGGCTGGGAGGGTG 62.240 65.000 0.00 0.00 0.00 4.61
1228 1443 1.988406 GAGTTACGGCTGGGAGGGT 60.988 63.158 0.00 0.00 0.00 4.34
1290 1506 3.595173 TGATGTACTTGCACGCAGTAAT 58.405 40.909 0.00 0.00 41.61 1.89
1316 1627 4.450053 ACCAACAACCAAACCAAATCATG 58.550 39.130 0.00 0.00 0.00 3.07
1323 1634 3.949113 GACTAGAACCAACAACCAAACCA 59.051 43.478 0.00 0.00 0.00 3.67
1343 1654 6.294065 CGGAGGGAGTAATACATAAGACTGAC 60.294 46.154 0.00 0.00 0.00 3.51
1363 1674 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
1370 1681 7.027874 ACAAAGTAGGGTCATCTATTTTGGA 57.972 36.000 17.65 0.00 44.27 3.53
1383 1694 7.681598 AGGGATAAAGTTAGTACAAAGTAGGGT 59.318 37.037 0.00 0.00 0.00 4.34
1385 1696 8.979534 AGAGGGATAAAGTTAGTACAAAGTAGG 58.020 37.037 0.00 0.00 0.00 3.18
1386 1697 9.804758 CAGAGGGATAAAGTTAGTACAAAGTAG 57.195 37.037 0.00 0.00 0.00 2.57
1387 1698 9.317827 ACAGAGGGATAAAGTTAGTACAAAGTA 57.682 33.333 0.00 0.00 0.00 2.24
1388 1699 8.203681 ACAGAGGGATAAAGTTAGTACAAAGT 57.796 34.615 0.00 0.00 0.00 2.66
1389 1700 9.503399 AAACAGAGGGATAAAGTTAGTACAAAG 57.497 33.333 0.00 0.00 0.00 2.77
1390 1701 9.498176 GAAACAGAGGGATAAAGTTAGTACAAA 57.502 33.333 0.00 0.00 0.00 2.83
1391 1702 8.653191 TGAAACAGAGGGATAAAGTTAGTACAA 58.347 33.333 0.00 0.00 0.00 2.41
1392 1703 8.197592 TGAAACAGAGGGATAAAGTTAGTACA 57.802 34.615 0.00 0.00 0.00 2.90
1393 1704 9.498176 TTTGAAACAGAGGGATAAAGTTAGTAC 57.502 33.333 0.00 0.00 0.00 2.73
1395 1706 8.990163 TTTTGAAACAGAGGGATAAAGTTAGT 57.010 30.769 0.00 0.00 0.00 2.24
1398 1709 9.807921 TCTATTTTGAAACAGAGGGATAAAGTT 57.192 29.630 0.00 0.00 0.00 2.66
1399 1710 9.981460 ATCTATTTTGAAACAGAGGGATAAAGT 57.019 29.630 0.00 0.00 0.00 2.66
1401 1712 9.973661 TCATCTATTTTGAAACAGAGGGATAAA 57.026 29.630 0.00 0.00 0.00 1.40
1403 1714 9.784531 GATCATCTATTTTGAAACAGAGGGATA 57.215 33.333 0.00 0.00 0.00 2.59
1404 1715 7.723172 GGATCATCTATTTTGAAACAGAGGGAT 59.277 37.037 0.00 0.69 0.00 3.85
1405 1716 7.056635 GGATCATCTATTTTGAAACAGAGGGA 58.943 38.462 0.00 0.00 0.00 4.20
1406 1717 6.830324 TGGATCATCTATTTTGAAACAGAGGG 59.170 38.462 0.00 0.00 0.00 4.30
1407 1718 7.870509 TGGATCATCTATTTTGAAACAGAGG 57.129 36.000 0.00 0.00 0.00 3.69
1408 1719 8.954350 AGTTGGATCATCTATTTTGAAACAGAG 58.046 33.333 0.00 0.00 0.00 3.35
1409 1720 8.868522 AGTTGGATCATCTATTTTGAAACAGA 57.131 30.769 0.00 0.00 0.00 3.41
1410 1721 9.918630 AAAGTTGGATCATCTATTTTGAAACAG 57.081 29.630 0.00 0.00 0.00 3.16
1411 1722 9.695526 CAAAGTTGGATCATCTATTTTGAAACA 57.304 29.630 0.00 0.00 0.00 2.83
1412 1723 9.696917 ACAAAGTTGGATCATCTATTTTGAAAC 57.303 29.630 12.56 0.00 0.00 2.78
1415 1726 9.739276 AGTACAAAGTTGGATCATCTATTTTGA 57.261 29.630 12.56 0.00 0.00 2.69
1472 1783 9.739276 AGTACAAAGTTGGATCATCTATTTTCA 57.261 29.630 0.00 0.00 0.00 2.69
1505 1816 9.778741 TCAAAATAGATGACTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
1512 1823 8.868522 TCCATTTCAAAATAGATGACTCAACT 57.131 30.769 0.00 0.00 0.00 3.16
1519 1830 9.354673 GTATTCCCTCCATTTCAAAATAGATGA 57.645 33.333 0.00 0.00 0.00 2.92
1522 1833 9.189156 CAAGTATTCCCTCCATTTCAAAATAGA 57.811 33.333 0.00 0.00 0.00 1.98
1523 1834 9.189156 TCAAGTATTCCCTCCATTTCAAAATAG 57.811 33.333 0.00 0.00 0.00 1.73
1531 1842 9.942526 AGAATTAATCAAGTATTCCCTCCATTT 57.057 29.630 0.00 0.00 0.00 2.32
1575 1886 0.452987 TATGTACCACGGTCACGCTC 59.547 55.000 0.00 0.00 46.04 5.03
1581 1892 2.631062 TCATCCCATATGTACCACGGTC 59.369 50.000 1.24 0.00 0.00 4.79
1584 1895 3.996363 CACATCATCCCATATGTACCACG 59.004 47.826 1.24 0.00 34.61 4.94
1658 1969 1.678728 GGCGACATTGATGACTTCCCA 60.679 52.381 0.00 0.00 0.00 4.37
1659 1970 1.017387 GGCGACATTGATGACTTCCC 58.983 55.000 0.00 0.00 0.00 3.97
1690 2001 4.766891 ACTATAATGCTGTGCCAAGTGTTT 59.233 37.500 0.00 0.00 0.00 2.83
1704 2015 7.148738 CGTCATCAAGGACATGTACTATAATGC 60.149 40.741 12.04 10.14 37.66 3.56
1740 2051 2.427095 AGAAACACAAAGTCCCAGCAAC 59.573 45.455 0.00 0.00 0.00 4.17
1831 2142 5.244402 TCTTGGTACGACAACTTATGGAGAA 59.756 40.000 0.00 0.00 0.00 2.87
1872 2209 1.545428 GGTTTCATGCCAGTGAGGTCA 60.545 52.381 0.00 0.00 40.61 4.02
1881 2218 4.533919 AAATCGATTTGGTTTCATGCCA 57.466 36.364 22.16 0.00 0.00 4.92
1896 2233 3.567585 TGACAAGCATGACCAAAAATCGA 59.432 39.130 0.00 0.00 0.00 3.59
1897 2234 3.899734 TGACAAGCATGACCAAAAATCG 58.100 40.909 0.00 0.00 0.00 3.34
1921 2258 5.564550 AGTCATTGAGCACCACTTAAGAAT 58.435 37.500 10.09 0.00 0.00 2.40
1945 2282 2.650013 TCCCCCTTGTAGATGGGAAAA 58.350 47.619 12.16 0.00 44.03 2.29
2089 2511 5.341169 AGCCCCAGGATTCTTGATTTTTAA 58.659 37.500 0.00 0.00 0.00 1.52
2123 2546 3.832490 CGTCTCATCTATATTCCCCACCA 59.168 47.826 0.00 0.00 0.00 4.17
2156 2605 8.654094 TGGATTTGCTAATTCTCATCTAGATGA 58.346 33.333 29.17 29.17 44.83 2.92
2157 2606 8.843885 TGGATTTGCTAATTCTCATCTAGATG 57.156 34.615 24.32 24.32 40.09 2.90
2158 2607 9.451002 CATGGATTTGCTAATTCTCATCTAGAT 57.549 33.333 0.00 0.00 33.05 1.98
2159 2608 8.435187 ACATGGATTTGCTAATTCTCATCTAGA 58.565 33.333 0.00 0.00 0.00 2.43
2160 2609 8.618702 ACATGGATTTGCTAATTCTCATCTAG 57.381 34.615 0.00 0.00 0.00 2.43
2161 2610 8.985315 AACATGGATTTGCTAATTCTCATCTA 57.015 30.769 0.00 0.00 0.00 1.98
2162 2611 7.778853 AGAACATGGATTTGCTAATTCTCATCT 59.221 33.333 0.00 0.00 0.00 2.90
2163 2612 7.938715 AGAACATGGATTTGCTAATTCTCATC 58.061 34.615 0.00 0.00 0.00 2.92
2164 2613 7.893124 AGAACATGGATTTGCTAATTCTCAT 57.107 32.000 0.00 1.36 0.00 2.90
2165 2614 8.806429 TTAGAACATGGATTTGCTAATTCTCA 57.194 30.769 0.00 0.00 0.00 3.27
2327 2790 3.387699 GCAAATGGGGGCAGTTATAATGT 59.612 43.478 0.00 0.00 0.00 2.71
2433 2896 5.523552 GCAGTAGCAAAAGGTGAAAACAATT 59.476 36.000 0.00 0.00 41.58 2.32
2434 2897 5.049828 GCAGTAGCAAAAGGTGAAAACAAT 58.950 37.500 0.00 0.00 41.58 2.71
2445 2908 1.168714 GACTGGGGCAGTAGCAAAAG 58.831 55.000 0.00 0.00 45.44 2.27
2783 3249 8.671921 ACACAAATTATTCAGCATCTCACTTAG 58.328 33.333 0.00 0.00 0.00 2.18
2897 3363 1.026584 CATTGAGATTGCGCCATCCA 58.973 50.000 17.16 12.09 0.00 3.41
2953 3419 1.203038 TGCCATGACATCACAAAGGGT 60.203 47.619 0.00 0.00 0.00 4.34
3995 4466 4.997395 TCAAGACAAGGTGAAGTAGATTGC 59.003 41.667 0.00 0.00 0.00 3.56
4050 4522 9.950496 AAGAGGCTATAATAATCACAATACCAG 57.050 33.333 0.00 0.00 0.00 4.00
4111 4583 8.105829 AGATGGATTATCATATTCCACCTCAAC 58.894 37.037 9.99 0.79 40.02 3.18
4176 4648 1.600636 CGAAAGCAGGGGCAAGTCA 60.601 57.895 0.00 0.00 44.61 3.41
4184 4656 1.463674 AAATAGGCACGAAAGCAGGG 58.536 50.000 0.00 0.00 35.83 4.45
4785 5257 5.543714 TGACTAACGAGCTAATGAAAACCA 58.456 37.500 0.00 0.00 0.00 3.67
4786 5258 5.638234 ACTGACTAACGAGCTAATGAAAACC 59.362 40.000 0.00 0.00 0.00 3.27
4817 5289 7.097834 AGTAATCCTCTTGGAAGTTACTTTCG 58.902 38.462 0.00 0.00 46.80 3.46
5059 5905 8.971073 AGCACAATTTAATAGCCTTACTTCAAT 58.029 29.630 0.00 0.00 0.00 2.57
5078 5924 4.708421 AGGCAACATATTTCAGAGCACAAT 59.292 37.500 0.00 0.00 41.41 2.71
5165 6014 5.285651 CACTTTGGTCTTTATTCGCCAAAA 58.714 37.500 8.62 0.00 46.33 2.44
5499 6350 5.428253 AGAGAACTGCAAACTTGTCTACAA 58.572 37.500 0.00 0.00 0.00 2.41
5617 6468 6.488683 TCAAAGATTTGACCTTCGTACCAAAT 59.511 34.615 3.91 5.53 41.88 2.32
5714 6565 3.128764 GGCGATCGACCATCTGATATGTA 59.871 47.826 21.57 0.00 0.00 2.29
5755 6606 3.845860 ACTGGATGGTGATATCCTACGT 58.154 45.455 0.00 0.00 45.59 3.57
5805 6656 1.965754 GCGAGATCAGGTTGGGCTCT 61.966 60.000 0.00 0.00 0.00 4.09
5842 6693 7.948278 ATTAATAAGAGGAAAATCGACGGAG 57.052 36.000 0.00 0.00 0.00 4.63
5919 6770 2.011947 TGAAATTCATCTCAGCCTGCG 58.988 47.619 0.00 0.00 0.00 5.18
5952 6803 0.994247 TGCTCTCACCACCCAATCAT 59.006 50.000 0.00 0.00 0.00 2.45
5956 6807 0.471780 TCTCTGCTCTCACCACCCAA 60.472 55.000 0.00 0.00 0.00 4.12
6018 6869 7.061789 CACAAAAGTCTGTTCACTACAAAAACC 59.938 37.037 0.00 0.00 36.02 3.27
6054 6905 3.071479 ACGTGTCAACACTCAACAACTT 58.929 40.909 11.23 0.00 44.34 2.66
6197 7050 6.391227 AGAAACAAATGTGGTTAACTCCAG 57.609 37.500 5.42 0.00 33.71 3.86
6247 7100 5.629079 ACAAGATTCAACGGAAATCCTTC 57.371 39.130 0.00 0.00 36.43 3.46
6277 7130 8.838365 CGTACCTTAGCTTTATAGAAGAGAGAA 58.162 37.037 0.00 0.00 0.00 2.87
6278 7131 7.992033 ACGTACCTTAGCTTTATAGAAGAGAGA 59.008 37.037 0.00 0.00 0.00 3.10
6279 7132 8.156994 ACGTACCTTAGCTTTATAGAAGAGAG 57.843 38.462 0.00 0.00 0.00 3.20
6280 7133 7.992033 AGACGTACCTTAGCTTTATAGAAGAGA 59.008 37.037 0.00 0.00 0.00 3.10
6281 7134 8.156994 AGACGTACCTTAGCTTTATAGAAGAG 57.843 38.462 0.00 0.00 0.00 2.85
6282 7135 8.517062 AAGACGTACCTTAGCTTTATAGAAGA 57.483 34.615 0.00 0.00 0.00 2.87
6283 7136 9.021863 CAAAGACGTACCTTAGCTTTATAGAAG 57.978 37.037 0.00 0.00 0.00 2.85
6284 7137 7.977853 CCAAAGACGTACCTTAGCTTTATAGAA 59.022 37.037 0.00 0.00 0.00 2.10
6285 7138 7.486647 CCAAAGACGTACCTTAGCTTTATAGA 58.513 38.462 0.00 0.00 0.00 1.98
6286 7139 6.200475 GCCAAAGACGTACCTTAGCTTTATAG 59.800 42.308 0.00 0.00 0.00 1.31
6287 7140 6.044682 GCCAAAGACGTACCTTAGCTTTATA 58.955 40.000 0.00 0.00 0.00 0.98
6288 7141 4.874396 GCCAAAGACGTACCTTAGCTTTAT 59.126 41.667 0.00 0.00 0.00 1.40
6289 7142 4.248058 GCCAAAGACGTACCTTAGCTTTA 58.752 43.478 0.00 0.00 0.00 1.85
6290 7143 3.072211 GCCAAAGACGTACCTTAGCTTT 58.928 45.455 0.00 0.00 0.00 3.51
6291 7144 2.696506 GCCAAAGACGTACCTTAGCTT 58.303 47.619 0.00 0.00 0.00 3.74
6292 7145 1.403780 CGCCAAAGACGTACCTTAGCT 60.404 52.381 0.00 0.00 0.00 3.32
6293 7146 0.997196 CGCCAAAGACGTACCTTAGC 59.003 55.000 0.00 0.00 0.00 3.09
6294 7147 2.358939 ACGCCAAAGACGTACCTTAG 57.641 50.000 0.00 0.00 43.02 2.18
6300 7153 0.527565 GAGGGTACGCCAAAGACGTA 59.472 55.000 6.27 0.00 44.55 3.57
6302 7155 0.320073 TTGAGGGTACGCCAAAGACG 60.320 55.000 6.27 0.00 36.17 4.18
6303 7156 1.886886 TTTGAGGGTACGCCAAAGAC 58.113 50.000 16.88 2.04 36.17 3.01
6304 7157 2.642154 TTTTGAGGGTACGCCAAAGA 57.358 45.000 18.69 11.77 36.17 2.52
6323 7176 8.463930 GGAAATTTTCCCAAGGATTTCTTTTT 57.536 30.769 16.06 0.00 44.30 1.94
6408 7261 2.737783 ACGTCAACAACAACGAAGTGAA 59.262 40.909 1.52 0.00 45.00 3.18
6499 7352 2.513204 TACTCGAGGCCGGAGTCG 60.513 66.667 28.57 18.71 37.54 4.18
6548 7401 0.323957 AAACTACTTCCGGACTGCCC 59.676 55.000 1.83 0.00 0.00 5.36
6549 7402 3.195661 CATAAACTACTTCCGGACTGCC 58.804 50.000 1.83 0.00 0.00 4.85
6550 7403 2.608090 GCATAAACTACTTCCGGACTGC 59.392 50.000 1.83 0.00 0.00 4.40
6551 7404 2.858344 CGCATAAACTACTTCCGGACTG 59.142 50.000 1.83 2.18 0.00 3.51
6552 7405 2.159142 CCGCATAAACTACTTCCGGACT 60.159 50.000 1.83 0.00 36.55 3.85
6553 7406 2.199236 CCGCATAAACTACTTCCGGAC 58.801 52.381 1.83 0.00 36.55 4.79
6554 7407 1.472026 GCCGCATAAACTACTTCCGGA 60.472 52.381 0.00 0.00 36.55 5.14
6555 7408 0.935196 GCCGCATAAACTACTTCCGG 59.065 55.000 0.00 0.00 37.43 5.14
6556 7409 1.859080 GAGCCGCATAAACTACTTCCG 59.141 52.381 0.00 0.00 0.00 4.30
6557 7410 2.901249 TGAGCCGCATAAACTACTTCC 58.099 47.619 0.00 0.00 0.00 3.46
6558 7411 4.939509 TTTGAGCCGCATAAACTACTTC 57.060 40.909 0.00 0.00 0.00 3.01
6559 7412 5.414454 TGAATTTGAGCCGCATAAACTACTT 59.586 36.000 0.00 0.00 0.00 2.24
6560 7413 4.941263 TGAATTTGAGCCGCATAAACTACT 59.059 37.500 0.00 0.00 0.00 2.57
6561 7414 5.028375 GTGAATTTGAGCCGCATAAACTAC 58.972 41.667 0.00 0.00 0.00 2.73
6562 7415 4.697828 TGTGAATTTGAGCCGCATAAACTA 59.302 37.500 0.00 0.00 0.00 2.24
6563 7416 3.505680 TGTGAATTTGAGCCGCATAAACT 59.494 39.130 0.00 0.00 0.00 2.66
6564 7417 3.832276 TGTGAATTTGAGCCGCATAAAC 58.168 40.909 0.00 0.00 0.00 2.01
6565 7418 4.717233 ATGTGAATTTGAGCCGCATAAA 57.283 36.364 0.00 0.00 30.26 1.40
6566 7419 4.422840 CAATGTGAATTTGAGCCGCATAA 58.577 39.130 0.00 0.00 31.61 1.90
6567 7420 3.734597 GCAATGTGAATTTGAGCCGCATA 60.735 43.478 0.00 0.00 31.61 3.14
6568 7421 2.883574 CAATGTGAATTTGAGCCGCAT 58.116 42.857 0.00 0.00 33.03 4.73
6569 7422 1.669502 GCAATGTGAATTTGAGCCGCA 60.670 47.619 0.00 0.00 0.00 5.69
6570 7423 0.994263 GCAATGTGAATTTGAGCCGC 59.006 50.000 0.00 0.00 0.00 6.53
6571 7424 1.261989 CGCAATGTGAATTTGAGCCG 58.738 50.000 0.00 0.00 0.00 5.52
6572 7425 2.352503 ACGCAATGTGAATTTGAGCC 57.647 45.000 0.00 0.00 0.00 4.70
6573 7426 3.490526 ACAAACGCAATGTGAATTTGAGC 59.509 39.130 14.15 0.00 34.93 4.26
6574 7427 5.640218 AACAAACGCAATGTGAATTTGAG 57.360 34.783 14.15 0.00 34.93 3.02
6575 7428 6.414408 AAAACAAACGCAATGTGAATTTGA 57.586 29.167 14.15 0.00 34.93 2.69
6576 7429 8.765044 ATAAAAACAAACGCAATGTGAATTTG 57.235 26.923 0.00 4.65 36.54 2.32
6577 7430 8.825745 AGATAAAAACAAACGCAATGTGAATTT 58.174 25.926 0.00 0.00 0.00 1.82
6578 7431 8.364129 AGATAAAAACAAACGCAATGTGAATT 57.636 26.923 0.00 0.00 0.00 2.17
6579 7432 7.867403 AGAGATAAAAACAAACGCAATGTGAAT 59.133 29.630 0.00 0.00 0.00 2.57
6580 7433 7.199766 AGAGATAAAAACAAACGCAATGTGAA 58.800 30.769 0.00 0.00 0.00 3.18
6581 7434 6.734137 AGAGATAAAAACAAACGCAATGTGA 58.266 32.000 0.00 0.00 0.00 3.58
6582 7435 6.991485 AGAGATAAAAACAAACGCAATGTG 57.009 33.333 0.00 0.00 0.00 3.21
6583 7436 6.074356 GCAAGAGATAAAAACAAACGCAATGT 60.074 34.615 0.00 0.00 0.00 2.71
6584 7437 6.291385 GCAAGAGATAAAAACAAACGCAATG 58.709 36.000 0.00 0.00 0.00 2.82
6585 7438 5.405269 GGCAAGAGATAAAAACAAACGCAAT 59.595 36.000 0.00 0.00 0.00 3.56
6586 7439 4.742659 GGCAAGAGATAAAAACAAACGCAA 59.257 37.500 0.00 0.00 0.00 4.85
6587 7440 4.295051 GGCAAGAGATAAAAACAAACGCA 58.705 39.130 0.00 0.00 0.00 5.24
6588 7441 3.673338 GGGCAAGAGATAAAAACAAACGC 59.327 43.478 0.00 0.00 0.00 4.84
6589 7442 4.917415 CAGGGCAAGAGATAAAAACAAACG 59.083 41.667 0.00 0.00 0.00 3.60
6590 7443 5.842907 ACAGGGCAAGAGATAAAAACAAAC 58.157 37.500 0.00 0.00 0.00 2.93
6591 7444 7.775053 ATACAGGGCAAGAGATAAAAACAAA 57.225 32.000 0.00 0.00 0.00 2.83
6592 7445 9.474313 AATATACAGGGCAAGAGATAAAAACAA 57.526 29.630 0.00 0.00 0.00 2.83
6593 7446 9.474313 AAATATACAGGGCAAGAGATAAAAACA 57.526 29.630 0.00 0.00 0.00 2.83
6594 7447 9.736023 CAAATATACAGGGCAAGAGATAAAAAC 57.264 33.333 0.00 0.00 0.00 2.43
6595 7448 8.912988 CCAAATATACAGGGCAAGAGATAAAAA 58.087 33.333 0.00 0.00 0.00 1.94
6596 7449 8.058847 ACCAAATATACAGGGCAAGAGATAAAA 58.941 33.333 0.00 0.00 0.00 1.52
6597 7450 7.582719 ACCAAATATACAGGGCAAGAGATAAA 58.417 34.615 0.00 0.00 0.00 1.40
6598 7451 7.149202 ACCAAATATACAGGGCAAGAGATAA 57.851 36.000 0.00 0.00 0.00 1.75
6599 7452 6.763715 ACCAAATATACAGGGCAAGAGATA 57.236 37.500 0.00 0.00 0.00 1.98
6600 7453 5.653255 ACCAAATATACAGGGCAAGAGAT 57.347 39.130 0.00 0.00 0.00 2.75
6601 7454 5.045213 TCAACCAAATATACAGGGCAAGAGA 60.045 40.000 0.00 0.00 0.00 3.10
6602 7455 5.192927 TCAACCAAATATACAGGGCAAGAG 58.807 41.667 0.00 0.00 0.00 2.85
6603 7456 5.186256 TCAACCAAATATACAGGGCAAGA 57.814 39.130 0.00 0.00 0.00 3.02
6604 7457 5.913137 TTCAACCAAATATACAGGGCAAG 57.087 39.130 0.00 0.00 0.00 4.01
6605 7458 6.667414 AGATTTCAACCAAATATACAGGGCAA 59.333 34.615 0.00 0.00 34.60 4.52
6606 7459 6.194235 AGATTTCAACCAAATATACAGGGCA 58.806 36.000 0.00 0.00 34.60 5.36
6607 7460 6.239036 GGAGATTTCAACCAAATATACAGGGC 60.239 42.308 0.00 0.00 34.60 5.19
6608 7461 6.265422 GGGAGATTTCAACCAAATATACAGGG 59.735 42.308 0.00 0.00 34.60 4.45
6609 7462 6.833416 TGGGAGATTTCAACCAAATATACAGG 59.167 38.462 0.00 0.00 34.60 4.00
6610 7463 7.880160 TGGGAGATTTCAACCAAATATACAG 57.120 36.000 0.00 0.00 34.60 2.74
6611 7464 8.058235 TGATGGGAGATTTCAACCAAATATACA 58.942 33.333 0.00 0.00 34.60 2.29
6612 7465 8.352942 GTGATGGGAGATTTCAACCAAATATAC 58.647 37.037 0.00 0.00 34.60 1.47
6613 7466 7.228507 CGTGATGGGAGATTTCAACCAAATATA 59.771 37.037 0.00 0.00 34.60 0.86
6614 7467 6.039717 CGTGATGGGAGATTTCAACCAAATAT 59.960 38.462 0.00 0.00 34.60 1.28
6615 7468 5.356751 CGTGATGGGAGATTTCAACCAAATA 59.643 40.000 0.00 0.00 34.60 1.40
6616 7469 4.158394 CGTGATGGGAGATTTCAACCAAAT 59.842 41.667 0.00 0.00 37.41 2.32
6617 7470 3.505680 CGTGATGGGAGATTTCAACCAAA 59.494 43.478 0.00 0.00 36.44 3.28
6618 7471 3.081061 CGTGATGGGAGATTTCAACCAA 58.919 45.455 0.00 0.00 36.44 3.67
6619 7472 2.304470 TCGTGATGGGAGATTTCAACCA 59.696 45.455 0.00 0.00 37.41 3.67
6620 7473 2.678336 GTCGTGATGGGAGATTTCAACC 59.322 50.000 0.00 0.00 0.00 3.77
6621 7474 2.678336 GGTCGTGATGGGAGATTTCAAC 59.322 50.000 0.00 0.00 0.00 3.18
6622 7475 2.355716 GGGTCGTGATGGGAGATTTCAA 60.356 50.000 0.00 0.00 0.00 2.69
6623 7476 1.209504 GGGTCGTGATGGGAGATTTCA 59.790 52.381 0.00 0.00 0.00 2.69
6624 7477 1.209504 TGGGTCGTGATGGGAGATTTC 59.790 52.381 0.00 0.00 0.00 2.17
6625 7478 1.285280 TGGGTCGTGATGGGAGATTT 58.715 50.000 0.00 0.00 0.00 2.17
6626 7479 1.511613 ATGGGTCGTGATGGGAGATT 58.488 50.000 0.00 0.00 0.00 2.40
6627 7480 1.511613 AATGGGTCGTGATGGGAGAT 58.488 50.000 0.00 0.00 0.00 2.75
6628 7481 1.065491 CAAATGGGTCGTGATGGGAGA 60.065 52.381 0.00 0.00 0.00 3.71
6629 7482 1.065491 TCAAATGGGTCGTGATGGGAG 60.065 52.381 0.00 0.00 0.00 4.30
6630 7483 0.988063 TCAAATGGGTCGTGATGGGA 59.012 50.000 0.00 0.00 0.00 4.37
6631 7484 1.094785 GTCAAATGGGTCGTGATGGG 58.905 55.000 0.00 0.00 0.00 4.00
6632 7485 1.468520 GTGTCAAATGGGTCGTGATGG 59.531 52.381 0.00 0.00 0.00 3.51
6633 7486 1.468520 GGTGTCAAATGGGTCGTGATG 59.531 52.381 0.00 0.00 0.00 3.07
6634 7487 1.073125 TGGTGTCAAATGGGTCGTGAT 59.927 47.619 0.00 0.00 0.00 3.06
6635 7488 0.470341 TGGTGTCAAATGGGTCGTGA 59.530 50.000 0.00 0.00 0.00 4.35
6636 7489 0.874390 CTGGTGTCAAATGGGTCGTG 59.126 55.000 0.00 0.00 0.00 4.35
6637 7490 0.889186 GCTGGTGTCAAATGGGTCGT 60.889 55.000 0.00 0.00 0.00 4.34
6638 7491 0.888736 TGCTGGTGTCAAATGGGTCG 60.889 55.000 0.00 0.00 0.00 4.79
6639 7492 1.327303 TTGCTGGTGTCAAATGGGTC 58.673 50.000 0.00 0.00 0.00 4.46
6640 7493 2.014010 ATTGCTGGTGTCAAATGGGT 57.986 45.000 0.00 0.00 0.00 4.51
6641 7494 2.613474 CCAATTGCTGGTGTCAAATGGG 60.613 50.000 0.00 0.00 39.58 4.00
6642 7495 2.690786 CCAATTGCTGGTGTCAAATGG 58.309 47.619 0.00 0.00 40.78 3.16
6653 7506 3.117794 CTCACACACAAACCAATTGCTG 58.882 45.455 0.00 0.00 43.13 4.41
6654 7507 3.023119 TCTCACACACAAACCAATTGCT 58.977 40.909 0.00 0.00 43.13 3.91
6655 7508 3.435105 TCTCACACACAAACCAATTGC 57.565 42.857 0.00 0.00 43.13 3.56
6656 7509 3.798337 GCTTCTCACACACAAACCAATTG 59.202 43.478 0.00 0.00 44.95 2.32
6657 7510 3.701040 AGCTTCTCACACACAAACCAATT 59.299 39.130 0.00 0.00 0.00 2.32
6658 7511 3.290710 AGCTTCTCACACACAAACCAAT 58.709 40.909 0.00 0.00 0.00 3.16
6659 7512 2.682856 GAGCTTCTCACACACAAACCAA 59.317 45.455 0.00 0.00 0.00 3.67
6660 7513 2.288666 GAGCTTCTCACACACAAACCA 58.711 47.619 0.00 0.00 0.00 3.67
6661 7514 1.261619 CGAGCTTCTCACACACAAACC 59.738 52.381 0.00 0.00 0.00 3.27
6662 7515 1.261619 CCGAGCTTCTCACACACAAAC 59.738 52.381 0.00 0.00 0.00 2.93
6663 7516 1.581934 CCGAGCTTCTCACACACAAA 58.418 50.000 0.00 0.00 0.00 2.83
6664 7517 0.880278 GCCGAGCTTCTCACACACAA 60.880 55.000 0.00 0.00 0.00 3.33
6665 7518 1.300931 GCCGAGCTTCTCACACACA 60.301 57.895 0.00 0.00 0.00 3.72
6666 7519 0.880278 TTGCCGAGCTTCTCACACAC 60.880 55.000 0.00 0.00 0.00 3.82
6667 7520 0.179059 TTTGCCGAGCTTCTCACACA 60.179 50.000 0.00 0.00 0.00 3.72
6668 7521 0.944386 TTTTGCCGAGCTTCTCACAC 59.056 50.000 0.00 0.00 0.00 3.82
6669 7522 1.202639 TCTTTTGCCGAGCTTCTCACA 60.203 47.619 0.00 0.00 0.00 3.58
6670 7523 1.512926 TCTTTTGCCGAGCTTCTCAC 58.487 50.000 0.00 0.00 0.00 3.51
6671 7524 2.254546 TTCTTTTGCCGAGCTTCTCA 57.745 45.000 0.00 0.00 0.00 3.27
6672 7525 2.744202 TGATTCTTTTGCCGAGCTTCTC 59.256 45.455 0.00 0.00 0.00 2.87
6673 7526 2.783135 TGATTCTTTTGCCGAGCTTCT 58.217 42.857 0.00 0.00 0.00 2.85
6674 7527 3.376546 AGATGATTCTTTTGCCGAGCTTC 59.623 43.478 0.00 0.00 0.00 3.86
6675 7528 3.350833 AGATGATTCTTTTGCCGAGCTT 58.649 40.909 0.00 0.00 0.00 3.74
6676 7529 2.996631 AGATGATTCTTTTGCCGAGCT 58.003 42.857 0.00 0.00 0.00 4.09
6677 7530 3.772060 AAGATGATTCTTTTGCCGAGC 57.228 42.857 0.00 0.00 39.18 5.03
6686 7539 9.447157 CAACCTCTTCTAGAAAAGATGATTCTT 57.553 33.333 7.42 0.00 44.20 2.52
6687 7540 8.601546 ACAACCTCTTCTAGAAAAGATGATTCT 58.398 33.333 7.42 0.00 37.65 2.40
6688 7541 8.785329 ACAACCTCTTCTAGAAAAGATGATTC 57.215 34.615 7.42 0.00 37.65 2.52
6689 7542 9.883142 CTACAACCTCTTCTAGAAAAGATGATT 57.117 33.333 7.42 0.00 37.65 2.57
6690 7543 8.482128 CCTACAACCTCTTCTAGAAAAGATGAT 58.518 37.037 7.42 1.40 37.65 2.45
6691 7544 7.093289 CCCTACAACCTCTTCTAGAAAAGATGA 60.093 40.741 7.42 0.00 36.36 2.92
6692 7545 7.044798 CCCTACAACCTCTTCTAGAAAAGATG 58.955 42.308 7.42 8.35 34.85 2.90
6693 7546 6.352308 GCCCTACAACCTCTTCTAGAAAAGAT 60.352 42.308 7.42 0.00 34.85 2.40
6694 7547 5.046520 GCCCTACAACCTCTTCTAGAAAAGA 60.047 44.000 7.42 0.69 34.22 2.52
6695 7548 5.179533 GCCCTACAACCTCTTCTAGAAAAG 58.820 45.833 6.63 2.37 0.00 2.27
6696 7549 4.019591 GGCCCTACAACCTCTTCTAGAAAA 60.020 45.833 6.63 0.00 0.00 2.29
6697 7550 3.518303 GGCCCTACAACCTCTTCTAGAAA 59.482 47.826 6.63 0.00 0.00 2.52
6698 7551 3.105283 GGCCCTACAACCTCTTCTAGAA 58.895 50.000 4.81 4.81 0.00 2.10
6699 7552 2.043939 TGGCCCTACAACCTCTTCTAGA 59.956 50.000 0.00 0.00 0.00 2.43
6700 7553 2.467880 TGGCCCTACAACCTCTTCTAG 58.532 52.381 0.00 0.00 0.00 2.43
6701 7554 2.634639 TGGCCCTACAACCTCTTCTA 57.365 50.000 0.00 0.00 0.00 2.10
6702 7555 1.972588 ATGGCCCTACAACCTCTTCT 58.027 50.000 0.00 0.00 0.00 2.85
6703 7556 2.504175 TGTATGGCCCTACAACCTCTTC 59.496 50.000 17.49 0.00 0.00 2.87
6704 7557 2.238898 GTGTATGGCCCTACAACCTCTT 59.761 50.000 20.85 0.00 33.59 2.85
6705 7558 1.838077 GTGTATGGCCCTACAACCTCT 59.162 52.381 20.85 0.00 33.59 3.69
6706 7559 1.472728 CGTGTATGGCCCTACAACCTC 60.473 57.143 20.85 9.00 33.59 3.85
6707 7560 0.539986 CGTGTATGGCCCTACAACCT 59.460 55.000 20.85 0.00 33.59 3.50
6708 7561 0.463116 CCGTGTATGGCCCTACAACC 60.463 60.000 20.85 9.96 33.59 3.77
6709 7562 0.251073 ACCGTGTATGGCCCTACAAC 59.749 55.000 20.85 14.13 33.59 3.32
6710 7563 0.985760 AACCGTGTATGGCCCTACAA 59.014 50.000 20.85 4.63 33.59 2.41
6711 7564 0.250793 CAACCGTGTATGGCCCTACA 59.749 55.000 16.07 16.07 0.00 2.74
6712 7565 0.251073 ACAACCGTGTATGGCCCTAC 59.749 55.000 11.01 11.01 35.72 3.18
6713 7566 1.863325 TACAACCGTGTATGGCCCTA 58.137 50.000 0.00 0.00 39.30 3.53
6714 7567 0.985760 TTACAACCGTGTATGGCCCT 59.014 50.000 0.00 0.00 39.96 5.19
6715 7568 1.375551 CTTACAACCGTGTATGGCCC 58.624 55.000 0.00 0.00 39.96 5.80
6716 7569 0.730840 GCTTACAACCGTGTATGGCC 59.269 55.000 0.00 0.00 39.96 5.36
6717 7570 1.734163 AGCTTACAACCGTGTATGGC 58.266 50.000 0.00 0.00 39.96 4.40
6718 7571 5.163794 CCTTTAAGCTTACAACCGTGTATGG 60.164 44.000 5.45 0.00 39.96 2.74
6719 7572 5.410439 ACCTTTAAGCTTACAACCGTGTATG 59.590 40.000 5.45 0.00 39.96 2.39
6720 7573 5.410439 CACCTTTAAGCTTACAACCGTGTAT 59.590 40.000 5.45 0.00 39.96 2.29
6721 7574 4.751098 CACCTTTAAGCTTACAACCGTGTA 59.249 41.667 5.45 0.00 39.30 2.90
6722 7575 3.562557 CACCTTTAAGCTTACAACCGTGT 59.437 43.478 5.45 0.00 42.09 4.49
6723 7576 3.058501 CCACCTTTAAGCTTACAACCGTG 60.059 47.826 5.45 8.23 0.00 4.94
6724 7577 3.143728 CCACCTTTAAGCTTACAACCGT 58.856 45.455 5.45 0.00 0.00 4.83
6725 7578 2.095415 GCCACCTTTAAGCTTACAACCG 60.095 50.000 5.45 0.00 0.00 4.44
6726 7579 3.154710 AGCCACCTTTAAGCTTACAACC 58.845 45.455 5.45 0.00 31.27 3.77
6727 7580 4.072839 AGAGCCACCTTTAAGCTTACAAC 58.927 43.478 5.45 0.00 36.87 3.32
6728 7581 4.072131 CAGAGCCACCTTTAAGCTTACAA 58.928 43.478 5.45 3.60 36.87 2.41
6729 7582 3.674997 CAGAGCCACCTTTAAGCTTACA 58.325 45.455 5.45 0.00 36.87 2.41
6730 7583 2.420372 GCAGAGCCACCTTTAAGCTTAC 59.580 50.000 5.45 0.00 36.87 2.34
6731 7584 2.039746 TGCAGAGCCACCTTTAAGCTTA 59.960 45.455 0.86 0.86 36.87 3.09
6732 7585 1.202927 TGCAGAGCCACCTTTAAGCTT 60.203 47.619 3.48 3.48 36.87 3.74
6733 7586 0.401738 TGCAGAGCCACCTTTAAGCT 59.598 50.000 0.00 0.00 40.24 3.74
6734 7587 0.807496 CTGCAGAGCCACCTTTAAGC 59.193 55.000 8.42 0.00 0.00 3.09
6735 7588 1.457346 CCTGCAGAGCCACCTTTAAG 58.543 55.000 17.39 0.00 0.00 1.85
6736 7589 0.609131 GCCTGCAGAGCCACCTTTAA 60.609 55.000 17.39 0.00 0.00 1.52
6737 7590 1.002134 GCCTGCAGAGCCACCTTTA 60.002 57.895 17.39 0.00 0.00 1.85
6738 7591 2.282745 GCCTGCAGAGCCACCTTT 60.283 61.111 17.39 0.00 0.00 3.11
6739 7592 3.137385 TTGCCTGCAGAGCCACCTT 62.137 57.895 17.39 0.00 0.00 3.50
6740 7593 3.564345 CTTGCCTGCAGAGCCACCT 62.564 63.158 17.39 0.00 0.00 4.00
6741 7594 3.060615 CTTGCCTGCAGAGCCACC 61.061 66.667 17.39 0.00 0.00 4.61
6742 7595 2.833604 ATCCTTGCCTGCAGAGCCAC 62.834 60.000 17.39 0.00 0.00 5.01
6743 7596 2.609534 ATCCTTGCCTGCAGAGCCA 61.610 57.895 17.39 8.00 0.00 4.75
6744 7597 2.119655 CATCCTTGCCTGCAGAGCC 61.120 63.158 17.39 3.53 0.00 4.70
6745 7598 2.772691 GCATCCTTGCCTGCAGAGC 61.773 63.158 17.39 17.32 43.38 4.09
6746 7599 2.470362 CGCATCCTTGCCTGCAGAG 61.470 63.158 17.39 4.38 46.57 3.35
6747 7600 2.437180 CGCATCCTTGCCTGCAGA 60.437 61.111 17.39 0.00 46.57 4.26
6748 7601 2.042259 TTCGCATCCTTGCCTGCAG 61.042 57.895 6.78 6.78 46.57 4.41
6749 7602 2.033911 TTCGCATCCTTGCCTGCA 59.966 55.556 0.00 0.00 46.57 4.41
6750 7603 1.660560 ATGTTCGCATCCTTGCCTGC 61.661 55.000 0.00 0.00 46.57 4.85
6751 7604 0.379669 GATGTTCGCATCCTTGCCTG 59.620 55.000 0.00 0.00 46.57 4.85
6752 7605 2.785868 GATGTTCGCATCCTTGCCT 58.214 52.632 0.00 0.00 46.57 4.75
6760 7613 1.086696 CTTTCCACGGATGTTCGCAT 58.913 50.000 0.00 0.00 41.22 4.73
6761 7614 0.034198 TCTTTCCACGGATGTTCGCA 59.966 50.000 0.00 0.00 0.00 5.10
6762 7615 0.442699 GTCTTTCCACGGATGTTCGC 59.557 55.000 0.00 0.00 0.00 4.70
6763 7616 1.790755 TGTCTTTCCACGGATGTTCG 58.209 50.000 0.00 0.00 0.00 3.95
6764 7617 4.036380 AGTTTTGTCTTTCCACGGATGTTC 59.964 41.667 0.00 0.00 0.00 3.18
6765 7618 3.951680 AGTTTTGTCTTTCCACGGATGTT 59.048 39.130 0.00 0.00 0.00 2.71
6766 7619 3.551846 AGTTTTGTCTTTCCACGGATGT 58.448 40.909 0.00 0.00 0.00 3.06
6767 7620 3.363970 CGAGTTTTGTCTTTCCACGGATG 60.364 47.826 0.00 0.00 0.00 3.51
6768 7621 2.806244 CGAGTTTTGTCTTTCCACGGAT 59.194 45.455 0.00 0.00 0.00 4.18
6769 7622 2.206750 CGAGTTTTGTCTTTCCACGGA 58.793 47.619 0.00 0.00 0.00 4.69
6770 7623 1.263217 CCGAGTTTTGTCTTTCCACGG 59.737 52.381 0.00 0.00 0.00 4.94
6771 7624 2.206750 TCCGAGTTTTGTCTTTCCACG 58.793 47.619 0.00 0.00 0.00 4.94
6772 7625 3.548214 GCTTCCGAGTTTTGTCTTTCCAC 60.548 47.826 0.00 0.00 0.00 4.02
6773 7626 2.616842 GCTTCCGAGTTTTGTCTTTCCA 59.383 45.455 0.00 0.00 0.00 3.53
6774 7627 2.031069 GGCTTCCGAGTTTTGTCTTTCC 60.031 50.000 0.00 0.00 0.00 3.13
6775 7628 2.616842 TGGCTTCCGAGTTTTGTCTTTC 59.383 45.455 0.00 0.00 0.00 2.62
6776 7629 2.650322 TGGCTTCCGAGTTTTGTCTTT 58.350 42.857 0.00 0.00 0.00 2.52
6777 7630 2.341846 TGGCTTCCGAGTTTTGTCTT 57.658 45.000 0.00 0.00 0.00 3.01
6778 7631 2.341846 TTGGCTTCCGAGTTTTGTCT 57.658 45.000 0.00 0.00 0.00 3.41
6779 7632 3.430333 TTTTGGCTTCCGAGTTTTGTC 57.570 42.857 0.00 0.00 0.00 3.18
6780 7633 3.132111 ACATTTTGGCTTCCGAGTTTTGT 59.868 39.130 0.00 0.00 0.00 2.83
6781 7634 3.716601 ACATTTTGGCTTCCGAGTTTTG 58.283 40.909 0.00 0.00 0.00 2.44
6782 7635 4.119136 CAACATTTTGGCTTCCGAGTTTT 58.881 39.130 0.00 0.00 0.00 2.43
6783 7636 3.492482 CCAACATTTTGGCTTCCGAGTTT 60.492 43.478 0.00 0.00 46.09 2.66
6784 7637 2.035832 CCAACATTTTGGCTTCCGAGTT 59.964 45.455 0.00 0.00 46.09 3.01
6785 7638 1.613437 CCAACATTTTGGCTTCCGAGT 59.387 47.619 0.00 0.00 46.09 4.18
6786 7639 2.352503 CCAACATTTTGGCTTCCGAG 57.647 50.000 0.00 0.00 46.09 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.