Multiple sequence alignment - TraesCS4B01G154600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G154600 chr4B 100.000 5741 0 0 1 5741 273688596 273682856 0.000000e+00 10602.0
1 TraesCS4B01G154600 chr4B 96.809 564 15 1 1 561 565112251 565111688 0.000000e+00 939.0
2 TraesCS4B01G154600 chr4B 96.631 564 16 1 1 561 10621664 10622227 0.000000e+00 933.0
3 TraesCS4B01G154600 chr4A 90.084 3580 147 81 1 3481 211000286 210996816 0.000000e+00 4453.0
4 TraesCS4B01G154600 chr4A 93.497 815 39 5 4585 5392 210994354 210993547 0.000000e+00 1199.0
5 TraesCS4B01G154600 chr4A 96.837 569 16 2 4025 4592 210995644 210995077 0.000000e+00 950.0
6 TraesCS4B01G154600 chr4A 90.728 302 18 3 3745 4037 210995982 210995682 1.500000e-105 394.0
7 TraesCS4B01G154600 chr4A 92.000 225 15 2 3474 3696 210996205 210995982 4.320000e-81 313.0
8 TraesCS4B01G154600 chr4A 80.242 248 32 13 3507 3746 276912342 276912580 2.750000e-38 171.0
9 TraesCS4B01G154600 chr4D 90.446 2512 92 48 1 2423 291736799 291739251 0.000000e+00 3173.0
10 TraesCS4B01G154600 chr4D 93.167 2122 98 25 3306 5392 291740587 291742696 0.000000e+00 3072.0
11 TraesCS4B01G154600 chr4D 96.409 891 25 5 2416 3304 291739575 291740460 0.000000e+00 1461.0
12 TraesCS4B01G154600 chr4D 94.318 352 13 3 5391 5741 3602682 3602337 3.050000e-147 532.0
13 TraesCS4B01G154600 chr4D 93.188 367 9 2 5391 5741 132936973 132936607 5.100000e-145 525.0
14 TraesCS4B01G154600 chr4D 82.090 268 30 11 3487 3746 208559008 208558751 4.510000e-51 213.0
15 TraesCS4B01G154600 chr6B 96.809 564 15 1 1 561 160388837 160388274 0.000000e+00 939.0
16 TraesCS4B01G154600 chr6B 93.816 566 30 3 1 561 387719541 387720106 0.000000e+00 846.0
17 TraesCS4B01G154600 chr7B 96.277 564 18 1 1 561 718400364 718399801 0.000000e+00 922.0
18 TraesCS4B01G154600 chr7B 95.922 564 20 1 1 561 709129241 709128678 0.000000e+00 911.0
19 TraesCS4B01G154600 chr7B 94.681 564 27 1 1 561 613375077 613375640 0.000000e+00 872.0
20 TraesCS4B01G154600 chr3B 95.752 565 20 2 1 561 16180151 16180715 0.000000e+00 907.0
21 TraesCS4B01G154600 chr2B 95.567 564 22 2 1 561 29005551 29006114 0.000000e+00 900.0
22 TraesCS4B01G154600 chr6D 95.330 364 8 5 5384 5741 465212613 465212253 2.320000e-158 569.0
23 TraesCS4B01G154600 chr6D 94.958 357 10 2 5393 5741 29098162 29098518 2.340000e-153 553.0
24 TraesCS4B01G154600 chr7D 96.023 352 8 2 5393 5741 576594684 576594336 8.350000e-158 568.0
25 TraesCS4B01G154600 chr2A 95.739 352 9 2 5393 5741 51573463 51573115 3.880000e-156 562.0
26 TraesCS4B01G154600 chr1A 94.602 352 10 3 5393 5741 275766456 275766801 2.350000e-148 536.0
27 TraesCS4B01G154600 chr1B 93.333 360 10 5 5393 5741 110624724 110624368 2.370000e-143 520.0
28 TraesCS4B01G154600 chr1B 91.854 356 17 4 5390 5741 260047498 260047845 2.400000e-133 486.0
29 TraesCS4B01G154600 chr2D 90.811 185 15 2 5393 5576 393585388 393585205 4.440000e-61 246.0
30 TraesCS4B01G154600 chr2D 81.132 106 15 5 3601 3701 423588007 423587902 4.770000e-11 80.5
31 TraesCS4B01G154600 chrUn 83.146 178 15 9 3487 3659 130474571 130474738 1.290000e-31 148.0
32 TraesCS4B01G154600 chr3A 97.222 36 0 1 3611 3645 123046270 123046235 6.210000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G154600 chr4B 273682856 273688596 5740 True 10602.000000 10602 100.000000 1 5741 1 chr4B.!!$R1 5740
1 TraesCS4B01G154600 chr4B 565111688 565112251 563 True 939.000000 939 96.809000 1 561 1 chr4B.!!$R2 560
2 TraesCS4B01G154600 chr4B 10621664 10622227 563 False 933.000000 933 96.631000 1 561 1 chr4B.!!$F1 560
3 TraesCS4B01G154600 chr4A 210993547 211000286 6739 True 1461.800000 4453 92.629200 1 5392 5 chr4A.!!$R1 5391
4 TraesCS4B01G154600 chr4D 291736799 291742696 5897 False 2568.666667 3173 93.340667 1 5392 3 chr4D.!!$F1 5391
5 TraesCS4B01G154600 chr6B 160388274 160388837 563 True 939.000000 939 96.809000 1 561 1 chr6B.!!$R1 560
6 TraesCS4B01G154600 chr6B 387719541 387720106 565 False 846.000000 846 93.816000 1 561 1 chr6B.!!$F1 560
7 TraesCS4B01G154600 chr7B 718399801 718400364 563 True 922.000000 922 96.277000 1 561 1 chr7B.!!$R2 560
8 TraesCS4B01G154600 chr7B 709128678 709129241 563 True 911.000000 911 95.922000 1 561 1 chr7B.!!$R1 560
9 TraesCS4B01G154600 chr7B 613375077 613375640 563 False 872.000000 872 94.681000 1 561 1 chr7B.!!$F1 560
10 TraesCS4B01G154600 chr3B 16180151 16180715 564 False 907.000000 907 95.752000 1 561 1 chr3B.!!$F1 560
11 TraesCS4B01G154600 chr2B 29005551 29006114 563 False 900.000000 900 95.567000 1 561 1 chr2B.!!$F1 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
649 700 0.036388 AATCGACCAACACGCAGGAT 60.036 50.0 0.00 0.00 0.00 3.24 F
933 1031 0.252197 ATACTCCAAAGCCCACGTCC 59.748 55.0 0.00 0.00 0.00 4.79 F
2575 3043 0.549950 CCATGACCCATGAGGCTTCT 59.450 55.0 8.38 0.00 43.81 2.85 F
2882 3351 0.892755 CACACTCCAGGCATGCATTT 59.107 50.0 21.36 0.83 0.00 2.32 F
3178 3647 1.169661 ACGCAGAAAATCGTGCCCAA 61.170 50.0 0.00 0.00 37.55 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 2132 0.180171 AGTTGTGTGTGCAGCCTACA 59.820 50.000 0.00 0.0 0.0 2.74 R
2914 3383 0.528466 GCCGCGTCTCATCTCAATCA 60.528 55.000 4.92 0.0 0.0 2.57 R
3482 4695 1.488390 TGGGACGGAGGGTGTATTAC 58.512 55.000 0.00 0.0 0.0 1.89 R
4717 6725 4.321156 GCCACATATGCAAAGAACAAGTCA 60.321 41.667 1.58 0.0 0.0 3.41 R
5089 7103 0.107993 TCCTTCAATGCTGCCTCTCG 60.108 55.000 0.00 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 126 7.086230 AGAAGCAGAAGAAAATGATTAGCAG 57.914 36.000 0.00 0.00 0.00 4.24
156 159 2.358582 TGCAAAACACACACCATCAGAG 59.641 45.455 0.00 0.00 0.00 3.35
188 198 0.846693 GCATACCACTTCCTGGGGAT 59.153 55.000 0.00 0.00 45.78 3.85
451 500 1.079127 AGGATCTGGGTCGCAAACG 60.079 57.895 0.00 0.00 42.01 3.60
495 545 2.295885 GCATAGTTGCTCCATCTTGCT 58.704 47.619 0.00 0.00 45.77 3.91
514 564 2.991866 GCTGTTACAGGGACGAAACTAC 59.008 50.000 14.63 0.00 31.21 2.73
570 621 1.878522 CCAAGCACTACGGCGCTAG 60.879 63.158 6.90 10.75 37.54 3.42
610 661 5.471257 ACTTGGTGATAAGAAGAAGACGTC 58.529 41.667 7.70 7.70 0.00 4.34
637 688 0.969894 AGGATGGGATCGAATCGACC 59.030 55.000 7.77 11.32 39.18 4.79
649 700 0.036388 AATCGACCAACACGCAGGAT 60.036 50.000 0.00 0.00 0.00 3.24
732 799 2.961741 TGATCTCTTGGATTCGAGGAGG 59.038 50.000 7.74 0.00 34.33 4.30
733 800 1.115467 TCTCTTGGATTCGAGGAGGC 58.885 55.000 7.74 0.00 0.00 4.70
788 860 2.669569 CGCAAGGGTGTGTGAGGG 60.670 66.667 0.00 0.00 0.00 4.30
790 862 2.282462 CAAGGGTGTGTGAGGGCC 60.282 66.667 0.00 0.00 0.00 5.80
795 867 3.948719 GTGTGTGAGGGCCGGGAA 61.949 66.667 2.18 0.00 0.00 3.97
933 1031 0.252197 ATACTCCAAAGCCCACGTCC 59.748 55.000 0.00 0.00 0.00 4.79
934 1032 0.834687 TACTCCAAAGCCCACGTCCT 60.835 55.000 0.00 0.00 0.00 3.85
936 1034 2.113139 CCAAAGCCCACGTCCTGT 59.887 61.111 0.00 0.00 0.00 4.00
937 1035 1.528309 CCAAAGCCCACGTCCTGTT 60.528 57.895 0.00 0.00 0.00 3.16
938 1036 1.106944 CCAAAGCCCACGTCCTGTTT 61.107 55.000 0.00 0.00 0.00 2.83
963 1077 1.681486 CCTCCCGCTCCTCCTCTTTC 61.681 65.000 0.00 0.00 0.00 2.62
968 1082 0.972983 CGCTCCTCCTCTTTCTCCCA 60.973 60.000 0.00 0.00 0.00 4.37
1262 1380 3.518998 CGCGTCCGTCTCCCTCAT 61.519 66.667 0.00 0.00 0.00 2.90
1290 1408 0.679505 TCTTCGACCACTTCCACCTG 59.320 55.000 0.00 0.00 0.00 4.00
1417 1535 1.227853 AACGCTTCGCTCCCAAACT 60.228 52.632 0.00 0.00 0.00 2.66
1529 1651 2.679355 TGACGTGCTCAAAATTTCCG 57.321 45.000 0.00 0.00 0.00 4.30
1547 1670 1.386412 CCGCATTTTTGTCAACATCGC 59.614 47.619 0.00 0.00 0.00 4.58
1602 1725 1.539827 CGTTTCGGCTCTTTCCCAAAT 59.460 47.619 0.00 0.00 0.00 2.32
1622 1745 0.742281 TTTGCCGCTCTGAGCTGATC 60.742 55.000 25.59 12.71 39.60 2.92
1633 1756 1.307097 GAGCTGATCATGTGCCTTCC 58.693 55.000 0.00 0.00 0.00 3.46
1995 2132 3.430929 GGGAATTGCAGATGACTACGACT 60.431 47.826 0.00 0.00 0.00 4.18
2104 2241 3.895041 GGGGTGAAAGAATTGAAGGTGAA 59.105 43.478 0.00 0.00 0.00 3.18
2108 2245 6.385033 GGTGAAAGAATTGAAGGTGAATCTG 58.615 40.000 0.00 0.00 0.00 2.90
2132 2269 8.327941 TGTAATTTGTTCTTCTCTCTTCATGG 57.672 34.615 0.00 0.00 0.00 3.66
2154 2291 5.705441 TGGCAAAAGATTTAGATCGTCAACT 59.295 36.000 0.00 0.00 37.37 3.16
2155 2292 6.206634 TGGCAAAAGATTTAGATCGTCAACTT 59.793 34.615 0.00 0.00 37.37 2.66
2156 2293 7.084486 GGCAAAAGATTTAGATCGTCAACTTT 58.916 34.615 0.00 0.00 37.37 2.66
2157 2294 8.234546 GGCAAAAGATTTAGATCGTCAACTTTA 58.765 33.333 9.34 0.00 37.37 1.85
2246 2383 5.241728 ACCAAGTCAAGGAATAGTTCTTTGC 59.758 40.000 9.00 5.67 43.87 3.68
2267 2404 5.288804 TGCAAAAGTAGAAATGGTTTCAGC 58.711 37.500 5.36 0.00 42.10 4.26
2268 2405 4.382754 GCAAAAGTAGAAATGGTTTCAGCG 59.617 41.667 5.36 0.00 42.10 5.18
2282 2419 5.703592 TGGTTTCAGCGAATAACTGTATGTT 59.296 36.000 0.00 0.00 42.31 2.71
2330 2467 9.638239 GCTCAGAATAGGAAATACTATCTTCAG 57.362 37.037 0.00 0.00 32.66 3.02
2354 2491 7.008628 CAGTTCTGCTTTCTAAAACAACACAAG 59.991 37.037 0.00 0.00 0.00 3.16
2522 2990 3.130693 AGGCTGGCGAGTAAGTAGTTTAG 59.869 47.826 0.00 0.00 0.00 1.85
2526 2994 5.706916 CTGGCGAGTAAGTAGTTTAGTTGA 58.293 41.667 0.00 0.00 30.45 3.18
2575 3043 0.549950 CCATGACCCATGAGGCTTCT 59.450 55.000 8.38 0.00 43.81 2.85
2882 3351 0.892755 CACACTCCAGGCATGCATTT 59.107 50.000 21.36 0.83 0.00 2.32
2907 3376 7.564793 TCTACACTGAACTATGCACCATTATT 58.435 34.615 0.00 0.00 0.00 1.40
2908 3377 6.441093 ACACTGAACTATGCACCATTATTG 57.559 37.500 0.00 0.00 0.00 1.90
2910 3379 6.127925 ACACTGAACTATGCACCATTATTGTG 60.128 38.462 0.00 0.00 36.79 3.33
2911 3380 6.093909 CACTGAACTATGCACCATTATTGTGA 59.906 38.462 0.32 0.00 35.74 3.58
2912 3381 6.830324 ACTGAACTATGCACCATTATTGTGAT 59.170 34.615 0.32 0.00 35.74 3.06
2913 3382 7.012704 ACTGAACTATGCACCATTATTGTGATC 59.987 37.037 0.32 0.00 35.74 2.92
2914 3383 7.056006 TGAACTATGCACCATTATTGTGATCT 58.944 34.615 0.32 0.00 35.74 2.75
2915 3384 6.872628 ACTATGCACCATTATTGTGATCTG 57.127 37.500 0.32 0.00 35.74 2.90
2916 3385 6.594744 ACTATGCACCATTATTGTGATCTGA 58.405 36.000 0.32 0.00 35.74 3.27
2917 3386 7.229308 ACTATGCACCATTATTGTGATCTGAT 58.771 34.615 0.32 0.00 35.74 2.90
2923 3392 7.040617 GCACCATTATTGTGATCTGATTGAGAT 60.041 37.037 0.32 0.00 44.78 2.75
2929 3398 4.929781 TGTGATCTGATTGAGATGAGACG 58.070 43.478 0.00 0.00 41.91 4.18
3028 3497 2.666272 TTCACATGCCTGGGTGTAAA 57.334 45.000 0.00 0.00 36.43 2.01
3063 3532 5.707764 GGTGCTAGAAAGTTCCTTTGATCTT 59.292 40.000 0.00 0.00 33.49 2.40
3178 3647 1.169661 ACGCAGAAAATCGTGCCCAA 61.170 50.000 0.00 0.00 37.55 4.12
3278 3747 5.275927 CGAGTGACAGATAACGCAAACTATG 60.276 44.000 0.00 0.00 0.00 2.23
3343 3938 8.057536 AGTGATATAATTTGGTACCGCAAAAA 57.942 30.769 7.57 2.32 0.00 1.94
3353 3948 3.119955 GGTACCGCAAAAATCAGGACTTC 60.120 47.826 0.00 0.00 0.00 3.01
3434 4029 3.395941 ACAGAAGTCATTTCCCTGTCCTT 59.604 43.478 0.00 0.00 36.40 3.36
3482 4695 7.284034 AGTTGAGATATGCTTTAGTTGGGATTG 59.716 37.037 0.00 0.00 0.00 2.67
3524 4738 8.203485 CCCATAATATAGTGCACATTGGTTTTT 58.797 33.333 21.04 4.13 0.00 1.94
3548 4762 5.163703 TGCGTAAGTCAATGTTCACAAACTT 60.164 36.000 9.40 9.40 41.68 2.66
3602 4820 9.645059 CATATCTACAATACCAACTAGTCCATG 57.355 37.037 0.00 0.00 0.00 3.66
3607 4825 5.938125 ACAATACCAACTAGTCCATGTGAAC 59.062 40.000 0.00 0.00 0.00 3.18
3885 5106 6.741992 TCTGCTAGTTCAAACCATAACATG 57.258 37.500 0.00 0.00 0.00 3.21
3890 5111 8.200792 TGCTAGTTCAAACCATAACATGTTTTT 58.799 29.630 17.78 8.25 0.00 1.94
3981 5208 7.391148 ACGCTGATAAATAGTGTTCCAATTT 57.609 32.000 0.00 0.00 35.50 1.82
3997 5224 5.248640 TCCAATTTGAGAGATGGTGACTTC 58.751 41.667 0.00 0.00 34.50 3.01
4022 5249 8.474831 TCTGATATAAGATGTCGAGTCCAAAAA 58.525 33.333 0.00 0.00 0.00 1.94
4138 5414 7.342194 GCAAATCATGTCAACATATTTGATGC 58.658 34.615 23.81 15.20 38.21 3.91
4198 5474 4.416620 GGAGTTGTAAGATCTGAGTCGTG 58.583 47.826 0.00 0.00 0.00 4.35
4327 5603 4.365514 TCTCAGCAAACACCCATAGAAA 57.634 40.909 0.00 0.00 0.00 2.52
4340 5616 6.144854 CACCCATAGAAATCAAATGCATACG 58.855 40.000 0.00 0.00 0.00 3.06
4384 5662 2.159057 AGCTGACTGGCTTTTTGTTTGG 60.159 45.455 0.00 0.00 39.86 3.28
4688 6696 4.188462 TGTATTCAGGTGTGGCTATTTCG 58.812 43.478 0.00 0.00 0.00 3.46
4701 6709 5.229887 GTGGCTATTTCGTTGTTGCATAATG 59.770 40.000 0.00 0.00 0.00 1.90
4702 6710 4.739716 GGCTATTTCGTTGTTGCATAATGG 59.260 41.667 0.00 0.00 0.00 3.16
4717 6725 8.408601 GTTGCATAATGGAGAGAACATTAATGT 58.591 33.333 15.47 15.47 42.22 2.71
4893 6904 7.418378 TCCAAATTATCCATCCAACCTTAACT 58.582 34.615 0.00 0.00 0.00 2.24
4991 7002 6.152154 AGCTTGTTACTAGGAAGAGAGAGAAC 59.848 42.308 2.80 0.00 0.00 3.01
5009 7020 4.692228 AGAACGAACCATTTTGTGCAAAT 58.308 34.783 0.00 0.00 35.24 2.32
5011 7022 6.276847 AGAACGAACCATTTTGTGCAAATTA 58.723 32.000 0.00 0.00 32.24 1.40
5012 7023 6.758886 AGAACGAACCATTTTGTGCAAATTAA 59.241 30.769 0.00 0.00 32.24 1.40
5013 7024 6.910536 ACGAACCATTTTGTGCAAATTAAA 57.089 29.167 0.00 0.00 32.24 1.52
5021 7035 6.820470 TTTTGTGCAAATTAAAAGGTCTCG 57.180 33.333 0.00 0.00 0.00 4.04
5056 7070 6.506147 TGCTTCGACTTGTTACTAACACTAA 58.494 36.000 0.82 0.00 41.97 2.24
5105 7122 3.895025 GCGAGAGGCAGCATTGAA 58.105 55.556 0.00 0.00 42.87 2.69
5127 7144 1.146566 GATGAGGCCATGGAATTCCCT 59.853 52.381 21.90 12.20 35.38 4.20
5180 7197 3.131400 GGTAGAGCTGGGTCAAGAGTAAG 59.869 52.174 0.00 0.00 0.00 2.34
5212 7229 6.363065 AGACTCAGCATTGAATTGATGGTAT 58.637 36.000 3.56 0.00 33.87 2.73
5237 7254 0.908198 GGTGAGGGAGAAGCTGACAT 59.092 55.000 0.00 0.00 0.00 3.06
5259 7276 2.848071 GGGTTTAACCAGGGGATAGTGA 59.152 50.000 16.58 0.00 41.02 3.41
5270 7287 0.175760 GGATAGTGAAGCTGGCGTCA 59.824 55.000 7.08 7.08 32.43 4.35
5304 7321 2.584970 CGCGCCGACATGTACCAT 60.585 61.111 0.00 0.00 0.00 3.55
5308 7325 1.537348 GCGCCGACATGTACCATTCTA 60.537 52.381 0.00 0.00 0.00 2.10
5313 7330 5.621329 CGCCGACATGTACCATTCTATGATA 60.621 44.000 0.00 0.00 0.00 2.15
5314 7331 6.341316 GCCGACATGTACCATTCTATGATAT 58.659 40.000 0.00 0.00 0.00 1.63
5326 7343 8.609483 ACCATTCTATGATATTGGAAGCTACAT 58.391 33.333 0.00 0.00 0.00 2.29
5392 7410 6.518208 AGAAGGGTATCGAGTCATATTAGC 57.482 41.667 0.00 0.00 0.00 3.09
5393 7411 6.010850 AGAAGGGTATCGAGTCATATTAGCA 58.989 40.000 0.00 0.00 0.00 3.49
5394 7412 6.493802 AGAAGGGTATCGAGTCATATTAGCAA 59.506 38.462 0.00 0.00 0.00 3.91
5395 7413 6.274157 AGGGTATCGAGTCATATTAGCAAG 57.726 41.667 0.00 0.00 0.00 4.01
5396 7414 5.186021 AGGGTATCGAGTCATATTAGCAAGG 59.814 44.000 0.00 0.00 0.00 3.61
5397 7415 5.047235 GGGTATCGAGTCATATTAGCAAGGT 60.047 44.000 0.00 0.00 0.00 3.50
5398 7416 6.456501 GGTATCGAGTCATATTAGCAAGGTT 58.543 40.000 0.00 0.00 0.00 3.50
5399 7417 6.929606 GGTATCGAGTCATATTAGCAAGGTTT 59.070 38.462 0.00 0.00 0.00 3.27
5400 7418 7.441458 GGTATCGAGTCATATTAGCAAGGTTTT 59.559 37.037 0.00 0.00 0.00 2.43
5401 7419 7.865706 ATCGAGTCATATTAGCAAGGTTTTT 57.134 32.000 0.00 0.00 0.00 1.94
5402 7420 7.072177 TCGAGTCATATTAGCAAGGTTTTTG 57.928 36.000 0.00 0.00 0.00 2.44
5403 7421 6.876789 TCGAGTCATATTAGCAAGGTTTTTGA 59.123 34.615 0.00 0.00 0.00 2.69
5404 7422 7.064609 TCGAGTCATATTAGCAAGGTTTTTGAG 59.935 37.037 0.00 0.00 0.00 3.02
5405 7423 7.148407 CGAGTCATATTAGCAAGGTTTTTGAGT 60.148 37.037 0.00 0.00 0.00 3.41
5406 7424 8.045176 AGTCATATTAGCAAGGTTTTTGAGTC 57.955 34.615 0.00 0.00 0.00 3.36
5407 7425 6.961554 GTCATATTAGCAAGGTTTTTGAGTCG 59.038 38.462 0.00 0.00 0.00 4.18
5408 7426 3.619233 TTAGCAAGGTTTTTGAGTCGC 57.381 42.857 0.00 0.00 0.00 5.19
5409 7427 0.668535 AGCAAGGTTTTTGAGTCGCC 59.331 50.000 0.00 0.00 0.00 5.54
5410 7428 0.668535 GCAAGGTTTTTGAGTCGCCT 59.331 50.000 0.00 0.00 0.00 5.52
5411 7429 1.877443 GCAAGGTTTTTGAGTCGCCTA 59.123 47.619 0.00 0.00 0.00 3.93
5412 7430 2.095718 GCAAGGTTTTTGAGTCGCCTAG 60.096 50.000 0.00 0.00 0.00 3.02
5413 7431 1.809684 AGGTTTTTGAGTCGCCTAGC 58.190 50.000 0.00 0.00 0.00 3.42
5414 7432 0.803117 GGTTTTTGAGTCGCCTAGCC 59.197 55.000 0.00 0.00 0.00 3.93
5415 7433 1.519408 GTTTTTGAGTCGCCTAGCCA 58.481 50.000 0.00 0.00 0.00 4.75
5416 7434 1.877443 GTTTTTGAGTCGCCTAGCCAA 59.123 47.619 0.00 0.00 0.00 4.52
5417 7435 1.808411 TTTTGAGTCGCCTAGCCAAG 58.192 50.000 0.00 0.00 0.00 3.61
5418 7436 0.685097 TTTGAGTCGCCTAGCCAAGT 59.315 50.000 0.00 0.00 0.00 3.16
5419 7437 0.246635 TTGAGTCGCCTAGCCAAGTC 59.753 55.000 0.00 0.00 0.00 3.01
5420 7438 1.226717 GAGTCGCCTAGCCAAGTCG 60.227 63.158 0.00 0.00 0.00 4.18
5421 7439 1.654954 GAGTCGCCTAGCCAAGTCGA 61.655 60.000 0.00 0.00 0.00 4.20
5422 7440 1.226717 GTCGCCTAGCCAAGTCGAG 60.227 63.158 0.00 0.00 0.00 4.04
5423 7441 1.677966 TCGCCTAGCCAAGTCGAGT 60.678 57.895 0.00 0.00 0.00 4.18
5424 7442 1.226717 CGCCTAGCCAAGTCGAGTC 60.227 63.158 0.00 0.00 0.00 3.36
5425 7443 1.226717 GCCTAGCCAAGTCGAGTCG 60.227 63.158 6.09 6.09 0.00 4.18
5426 7444 1.226717 CCTAGCCAAGTCGAGTCGC 60.227 63.158 7.92 3.09 0.00 5.19
5427 7445 1.226717 CTAGCCAAGTCGAGTCGCC 60.227 63.158 7.92 0.00 0.00 5.54
5428 7446 1.934220 CTAGCCAAGTCGAGTCGCCA 61.934 60.000 7.92 0.00 0.00 5.69
5429 7447 1.320344 TAGCCAAGTCGAGTCGCCAT 61.320 55.000 7.92 0.00 0.00 4.40
5430 7448 2.456119 GCCAAGTCGAGTCGCCATG 61.456 63.158 7.92 0.00 0.00 3.66
5431 7449 2.456119 CCAAGTCGAGTCGCCATGC 61.456 63.158 7.92 0.00 0.00 4.06
5432 7450 2.125512 AAGTCGAGTCGCCATGCC 60.126 61.111 7.92 0.00 0.00 4.40
5433 7451 2.650116 AAGTCGAGTCGCCATGCCT 61.650 57.895 7.92 0.00 0.00 4.75
5434 7452 2.564553 AAGTCGAGTCGCCATGCCTC 62.565 60.000 7.92 0.00 0.00 4.70
5435 7453 3.838271 TCGAGTCGCCATGCCTCC 61.838 66.667 7.92 0.00 0.00 4.30
5437 7455 3.838271 GAGTCGCCATGCCTCCGA 61.838 66.667 0.00 0.00 0.00 4.55
5439 7457 4.148825 GTCGCCATGCCTCCGACT 62.149 66.667 14.80 0.00 45.56 4.18
5440 7458 2.441348 TCGCCATGCCTCCGACTA 60.441 61.111 0.00 0.00 0.00 2.59
5441 7459 2.028190 CGCCATGCCTCCGACTAG 59.972 66.667 0.00 0.00 0.00 2.57
5442 7460 2.786495 CGCCATGCCTCCGACTAGT 61.786 63.158 0.00 0.00 0.00 2.57
5443 7461 1.227380 GCCATGCCTCCGACTAGTG 60.227 63.158 0.00 0.00 0.00 2.74
5444 7462 1.443407 CCATGCCTCCGACTAGTGG 59.557 63.158 0.00 0.00 0.00 4.00
5445 7463 1.227380 CATGCCTCCGACTAGTGGC 60.227 63.158 13.68 13.68 45.10 5.01
5446 7464 1.381872 ATGCCTCCGACTAGTGGCT 60.382 57.895 19.47 5.99 45.11 4.75
5447 7465 1.395826 ATGCCTCCGACTAGTGGCTC 61.396 60.000 19.47 0.00 45.11 4.70
5448 7466 3.111939 CCTCCGACTAGTGGCTCG 58.888 66.667 0.00 0.00 0.00 5.03
5449 7467 2.409651 CTCCGACTAGTGGCTCGC 59.590 66.667 0.00 0.00 0.00 5.03
5450 7468 2.045242 TCCGACTAGTGGCTCGCT 60.045 61.111 0.00 0.00 0.00 4.93
5451 7469 2.103143 CCGACTAGTGGCTCGCTG 59.897 66.667 0.00 0.00 0.00 5.18
5452 7470 2.580867 CGACTAGTGGCTCGCTGC 60.581 66.667 0.00 0.00 41.94 5.25
5453 7471 2.580867 GACTAGTGGCTCGCTGCG 60.581 66.667 17.25 17.25 44.05 5.18
5454 7472 3.052620 GACTAGTGGCTCGCTGCGA 62.053 63.158 24.43 24.43 44.05 5.10
5455 7473 2.343163 GACTAGTGGCTCGCTGCGAT 62.343 60.000 26.15 12.77 44.05 4.58
5456 7474 1.227089 CTAGTGGCTCGCTGCGATT 60.227 57.895 26.15 11.11 44.05 3.34
5457 7475 0.030773 CTAGTGGCTCGCTGCGATTA 59.969 55.000 26.15 11.77 44.05 1.75
5458 7476 0.030773 TAGTGGCTCGCTGCGATTAG 59.969 55.000 26.15 15.06 44.05 1.73
5459 7477 1.519455 GTGGCTCGCTGCGATTAGT 60.519 57.895 26.15 0.00 44.05 2.24
5460 7478 1.226974 TGGCTCGCTGCGATTAGTC 60.227 57.895 26.15 15.95 44.05 2.59
5461 7479 1.066587 GGCTCGCTGCGATTAGTCT 59.933 57.895 26.15 0.00 44.05 3.24
5462 7480 1.211818 GGCTCGCTGCGATTAGTCTG 61.212 60.000 26.15 12.79 44.05 3.51
5463 7481 1.816214 GCTCGCTGCGATTAGTCTGC 61.816 60.000 26.15 18.79 34.61 4.26
5464 7482 1.535636 CTCGCTGCGATTAGTCTGCG 61.536 60.000 26.15 6.47 43.95 5.18
5465 7483 1.586303 CGCTGCGATTAGTCTGCGA 60.586 57.895 18.66 0.00 45.15 5.10
5466 7484 1.802300 CGCTGCGATTAGTCTGCGAC 61.802 60.000 18.66 1.15 45.15 5.19
5467 7485 0.526524 GCTGCGATTAGTCTGCGACT 60.527 55.000 14.10 14.10 45.54 4.18
5468 7486 1.471964 CTGCGATTAGTCTGCGACTC 58.528 55.000 13.24 2.15 42.40 3.36
5469 7487 0.248094 TGCGATTAGTCTGCGACTCG 60.248 55.000 13.24 12.26 42.40 4.18
5470 7488 0.248134 GCGATTAGTCTGCGACTCGT 60.248 55.000 13.24 5.34 42.40 4.18
5471 7489 1.732528 CGATTAGTCTGCGACTCGTC 58.267 55.000 13.24 11.56 42.40 4.20
5483 7501 1.443540 CGACTCGTCGTGATTAATCGC 59.556 52.381 17.37 17.37 46.99 4.58
5484 7502 1.779724 GACTCGTCGTGATTAATCGCC 59.220 52.381 20.52 8.83 33.90 5.54
5485 7503 1.129326 CTCGTCGTGATTAATCGCCC 58.871 55.000 20.52 11.86 33.90 6.13
5486 7504 0.249155 TCGTCGTGATTAATCGCCCC 60.249 55.000 20.52 11.56 33.90 5.80
5487 7505 0.528901 CGTCGTGATTAATCGCCCCA 60.529 55.000 20.52 4.95 33.90 4.96
5488 7506 1.658994 GTCGTGATTAATCGCCCCAA 58.341 50.000 20.52 4.21 33.90 4.12
5489 7507 1.597663 GTCGTGATTAATCGCCCCAAG 59.402 52.381 20.52 8.54 33.90 3.61
5490 7508 1.208535 TCGTGATTAATCGCCCCAAGT 59.791 47.619 20.52 0.00 33.90 3.16
5491 7509 1.597663 CGTGATTAATCGCCCCAAGTC 59.402 52.381 20.52 0.00 33.90 3.01
5492 7510 1.597663 GTGATTAATCGCCCCAAGTCG 59.402 52.381 16.66 0.00 0.00 4.18
5493 7511 0.586802 GATTAATCGCCCCAAGTCGC 59.413 55.000 0.00 0.00 0.00 5.19
5494 7512 0.818040 ATTAATCGCCCCAAGTCGCC 60.818 55.000 0.00 0.00 0.00 5.54
5495 7513 2.879813 TTAATCGCCCCAAGTCGCCC 62.880 60.000 0.00 0.00 0.00 6.13
5501 7519 4.722700 CCCAAGTCGCCCCAGGTG 62.723 72.222 0.00 0.00 33.99 4.00
5502 7520 3.953775 CCAAGTCGCCCCAGGTGT 61.954 66.667 0.00 0.00 34.40 4.16
5503 7521 2.113139 CAAGTCGCCCCAGGTGTT 59.887 61.111 0.00 0.00 34.40 3.32
5504 7522 1.373435 CAAGTCGCCCCAGGTGTTA 59.627 57.895 0.00 0.00 34.40 2.41
5505 7523 0.250553 CAAGTCGCCCCAGGTGTTAA 60.251 55.000 0.00 0.00 34.40 2.01
5506 7524 0.036306 AAGTCGCCCCAGGTGTTAAG 59.964 55.000 0.00 0.00 34.40 1.85
5507 7525 0.834687 AGTCGCCCCAGGTGTTAAGA 60.835 55.000 0.00 0.00 34.40 2.10
5508 7526 0.391263 GTCGCCCCAGGTGTTAAGAG 60.391 60.000 0.00 0.00 34.40 2.85
5509 7527 1.078426 CGCCCCAGGTGTTAAGAGG 60.078 63.158 0.00 0.00 0.00 3.69
5510 7528 1.550130 CGCCCCAGGTGTTAAGAGGA 61.550 60.000 0.00 0.00 0.00 3.71
5511 7529 0.253327 GCCCCAGGTGTTAAGAGGAG 59.747 60.000 0.00 0.00 0.00 3.69
5512 7530 0.912486 CCCCAGGTGTTAAGAGGAGG 59.088 60.000 0.00 0.00 0.00 4.30
5513 7531 1.554822 CCCCAGGTGTTAAGAGGAGGA 60.555 57.143 0.00 0.00 0.00 3.71
5514 7532 1.834263 CCCAGGTGTTAAGAGGAGGAG 59.166 57.143 0.00 0.00 0.00 3.69
5515 7533 1.834263 CCAGGTGTTAAGAGGAGGAGG 59.166 57.143 0.00 0.00 0.00 4.30
5516 7534 2.559931 CCAGGTGTTAAGAGGAGGAGGA 60.560 54.545 0.00 0.00 0.00 3.71
5517 7535 2.763448 CAGGTGTTAAGAGGAGGAGGAG 59.237 54.545 0.00 0.00 0.00 3.69
5518 7536 2.112190 GGTGTTAAGAGGAGGAGGAGG 58.888 57.143 0.00 0.00 0.00 4.30
5519 7537 2.292323 GGTGTTAAGAGGAGGAGGAGGA 60.292 54.545 0.00 0.00 0.00 3.71
5520 7538 3.028130 GTGTTAAGAGGAGGAGGAGGAG 58.972 54.545 0.00 0.00 0.00 3.69
5521 7539 2.023888 TGTTAAGAGGAGGAGGAGGAGG 60.024 54.545 0.00 0.00 0.00 4.30
5522 7540 2.245287 GTTAAGAGGAGGAGGAGGAGGA 59.755 54.545 0.00 0.00 0.00 3.71
5523 7541 0.933700 AAGAGGAGGAGGAGGAGGAG 59.066 60.000 0.00 0.00 0.00 3.69
5524 7542 0.998945 AGAGGAGGAGGAGGAGGAGG 60.999 65.000 0.00 0.00 0.00 4.30
5525 7543 2.018086 AGGAGGAGGAGGAGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
5526 7544 2.612251 GAGGAGGAGGAGGAGGGG 59.388 72.222 0.00 0.00 0.00 4.79
5527 7545 3.039526 AGGAGGAGGAGGAGGGGG 61.040 72.222 0.00 0.00 0.00 5.40
5528 7546 3.036959 GGAGGAGGAGGAGGGGGA 61.037 72.222 0.00 0.00 0.00 4.81
5529 7547 2.647949 GGAGGAGGAGGAGGGGGAA 61.648 68.421 0.00 0.00 0.00 3.97
5530 7548 1.074850 GAGGAGGAGGAGGGGGAAG 60.075 68.421 0.00 0.00 0.00 3.46
5531 7549 1.550374 AGGAGGAGGAGGGGGAAGA 60.550 63.158 0.00 0.00 0.00 2.87
5532 7550 1.074850 GGAGGAGGAGGGGGAAGAG 60.075 68.421 0.00 0.00 0.00 2.85
5533 7551 1.074850 GAGGAGGAGGGGGAAGAGG 60.075 68.421 0.00 0.00 0.00 3.69
5534 7552 1.869452 AGGAGGAGGGGGAAGAGGT 60.869 63.158 0.00 0.00 0.00 3.85
5535 7553 1.690985 GGAGGAGGGGGAAGAGGTG 60.691 68.421 0.00 0.00 0.00 4.00
5536 7554 2.285743 AGGAGGGGGAAGAGGTGC 60.286 66.667 0.00 0.00 0.00 5.01
5537 7555 2.285743 GGAGGGGGAAGAGGTGCT 60.286 66.667 0.00 0.00 0.00 4.40
5538 7556 2.674220 GGAGGGGGAAGAGGTGCTG 61.674 68.421 0.00 0.00 0.00 4.41
5539 7557 1.920835 GAGGGGGAAGAGGTGCTGT 60.921 63.158 0.00 0.00 0.00 4.40
5540 7558 1.464198 AGGGGGAAGAGGTGCTGTT 60.464 57.895 0.00 0.00 0.00 3.16
5541 7559 1.303643 GGGGGAAGAGGTGCTGTTG 60.304 63.158 0.00 0.00 0.00 3.33
5542 7560 1.456287 GGGGAAGAGGTGCTGTTGT 59.544 57.895 0.00 0.00 0.00 3.32
5543 7561 0.690762 GGGGAAGAGGTGCTGTTGTA 59.309 55.000 0.00 0.00 0.00 2.41
5544 7562 1.339151 GGGGAAGAGGTGCTGTTGTAG 60.339 57.143 0.00 0.00 0.00 2.74
5545 7563 1.339151 GGGAAGAGGTGCTGTTGTAGG 60.339 57.143 0.00 0.00 0.00 3.18
5546 7564 1.443802 GAAGAGGTGCTGTTGTAGGC 58.556 55.000 0.00 0.00 0.00 3.93
5547 7565 0.320771 AAGAGGTGCTGTTGTAGGCG 60.321 55.000 0.00 0.00 0.00 5.52
5548 7566 1.741770 GAGGTGCTGTTGTAGGCGG 60.742 63.158 0.00 0.00 0.00 6.13
5549 7567 2.167398 GAGGTGCTGTTGTAGGCGGA 62.167 60.000 0.00 0.00 0.00 5.54
5550 7568 1.741770 GGTGCTGTTGTAGGCGGAG 60.742 63.158 0.00 0.00 0.00 4.63
5551 7569 1.741770 GTGCTGTTGTAGGCGGAGG 60.742 63.158 0.00 0.00 0.00 4.30
5552 7570 1.911269 TGCTGTTGTAGGCGGAGGA 60.911 57.895 0.00 0.00 0.00 3.71
5553 7571 1.153549 GCTGTTGTAGGCGGAGGAG 60.154 63.158 0.00 0.00 0.00 3.69
5554 7572 1.517832 CTGTTGTAGGCGGAGGAGG 59.482 63.158 0.00 0.00 0.00 4.30
5555 7573 1.961180 CTGTTGTAGGCGGAGGAGGG 61.961 65.000 0.00 0.00 0.00 4.30
5556 7574 2.365105 TTGTAGGCGGAGGAGGGG 60.365 66.667 0.00 0.00 0.00 4.79
5557 7575 3.995809 TTGTAGGCGGAGGAGGGGG 62.996 68.421 0.00 0.00 0.00 5.40
5558 7576 4.477119 GTAGGCGGAGGAGGGGGT 62.477 72.222 0.00 0.00 0.00 4.95
5559 7577 2.701093 TAGGCGGAGGAGGGGGTA 60.701 66.667 0.00 0.00 0.00 3.69
5560 7578 2.775741 TAGGCGGAGGAGGGGGTAG 61.776 68.421 0.00 0.00 0.00 3.18
5563 7581 4.475444 CGGAGGAGGGGGTAGGCA 62.475 72.222 0.00 0.00 0.00 4.75
5564 7582 2.446802 GGAGGAGGGGGTAGGCAG 60.447 72.222 0.00 0.00 0.00 4.85
5565 7583 3.164977 GAGGAGGGGGTAGGCAGC 61.165 72.222 0.00 0.00 0.00 5.25
5566 7584 3.700350 AGGAGGGGGTAGGCAGCT 61.700 66.667 0.00 0.00 0.00 4.24
5567 7585 3.483869 GGAGGGGGTAGGCAGCTG 61.484 72.222 10.11 10.11 0.00 4.24
5568 7586 4.182433 GAGGGGGTAGGCAGCTGC 62.182 72.222 30.88 30.88 41.14 5.25
5569 7587 4.748798 AGGGGGTAGGCAGCTGCT 62.749 66.667 35.82 23.99 41.70 4.24
5570 7588 3.732849 GGGGGTAGGCAGCTGCTT 61.733 66.667 35.82 31.71 41.70 3.91
5571 7589 2.439156 GGGGTAGGCAGCTGCTTG 60.439 66.667 35.82 1.85 41.70 4.01
5572 7590 2.439156 GGGTAGGCAGCTGCTTGG 60.439 66.667 35.82 0.25 41.70 3.61
5573 7591 2.671070 GGTAGGCAGCTGCTTGGA 59.329 61.111 35.82 14.11 41.70 3.53
5574 7592 1.451028 GGTAGGCAGCTGCTTGGAG 60.451 63.158 35.82 0.00 41.70 3.86
5575 7593 1.451028 GTAGGCAGCTGCTTGGAGG 60.451 63.158 35.82 0.00 41.70 4.30
5576 7594 1.613332 TAGGCAGCTGCTTGGAGGA 60.613 57.895 35.82 12.51 41.70 3.71
5577 7595 0.984961 TAGGCAGCTGCTTGGAGGAT 60.985 55.000 35.82 15.00 41.70 3.24
5578 7596 0.984961 AGGCAGCTGCTTGGAGGATA 60.985 55.000 35.82 0.00 41.70 2.59
5579 7597 0.817229 GGCAGCTGCTTGGAGGATAC 60.817 60.000 35.82 13.26 41.70 2.24
5580 7598 0.179936 GCAGCTGCTTGGAGGATACT 59.820 55.000 31.33 0.00 45.19 2.12
5581 7599 1.407989 GCAGCTGCTTGGAGGATACTT 60.408 52.381 31.33 0.00 43.21 2.24
5582 7600 3.319951 GCAGCTGCTTGGAGGATACTTC 61.320 54.545 31.33 0.00 43.21 3.01
5594 7612 3.363341 GGATACTTCAGCTCGGAGAAG 57.637 52.381 9.69 9.38 45.14 2.85
5595 7613 2.035321 GGATACTTCAGCTCGGAGAAGG 59.965 54.545 9.69 0.00 44.20 3.46
5596 7614 0.818296 TACTTCAGCTCGGAGAAGGC 59.182 55.000 9.69 0.00 44.20 4.35
5597 7615 1.188219 ACTTCAGCTCGGAGAAGGCA 61.188 55.000 9.69 0.00 44.20 4.75
5598 7616 0.459934 CTTCAGCTCGGAGAAGGCAG 60.460 60.000 9.69 0.00 38.03 4.85
5599 7617 2.511145 CAGCTCGGAGAAGGCAGC 60.511 66.667 9.69 0.00 34.09 5.25
5600 7618 2.999648 AGCTCGGAGAAGGCAGCA 61.000 61.111 9.69 0.00 34.09 4.41
5601 7619 2.511145 GCTCGGAGAAGGCAGCAG 60.511 66.667 9.69 0.00 34.09 4.24
5602 7620 2.511145 CTCGGAGAAGGCAGCAGC 60.511 66.667 0.00 0.00 36.30 5.25
5603 7621 3.306595 CTCGGAGAAGGCAGCAGCA 62.307 63.158 2.65 0.00 38.51 4.41
5604 7622 2.818714 CGGAGAAGGCAGCAGCAG 60.819 66.667 2.65 0.00 44.61 4.24
5605 7623 3.132801 GGAGAAGGCAGCAGCAGC 61.133 66.667 2.65 0.00 44.61 5.25
5612 7630 2.823147 GCAGCAGCAGCCTGTAGG 60.823 66.667 0.00 0.00 43.56 3.18
5613 7631 2.984623 CAGCAGCAGCCTGTAGGA 59.015 61.111 1.17 0.00 43.56 2.94
5614 7632 1.153409 CAGCAGCAGCCTGTAGGAG 60.153 63.158 1.17 0.00 43.56 3.69
5615 7633 2.513435 GCAGCAGCCTGTAGGAGC 60.513 66.667 1.17 4.97 41.26 4.70
5616 7634 2.984623 CAGCAGCCTGTAGGAGCA 59.015 61.111 15.15 0.00 39.31 4.26
5617 7635 1.297689 CAGCAGCCTGTAGGAGCAA 59.702 57.895 15.15 0.00 39.31 3.91
5618 7636 0.107312 CAGCAGCCTGTAGGAGCAAT 60.107 55.000 15.15 0.00 39.31 3.56
5619 7637 0.107312 AGCAGCCTGTAGGAGCAATG 60.107 55.000 15.15 2.34 39.31 2.82
5620 7638 1.099879 GCAGCCTGTAGGAGCAATGG 61.100 60.000 1.17 0.00 37.59 3.16
5621 7639 0.543277 CAGCCTGTAGGAGCAATGGA 59.457 55.000 1.17 0.00 37.39 3.41
5622 7640 0.835941 AGCCTGTAGGAGCAATGGAG 59.164 55.000 1.17 0.00 37.39 3.86
5623 7641 0.179034 GCCTGTAGGAGCAATGGAGG 60.179 60.000 1.17 0.00 37.39 4.30
5624 7642 0.179034 CCTGTAGGAGCAATGGAGGC 60.179 60.000 0.00 0.00 37.39 4.70
5625 7643 0.531532 CTGTAGGAGCAATGGAGGCG 60.532 60.000 0.00 0.00 36.08 5.52
5626 7644 1.227674 GTAGGAGCAATGGAGGCGG 60.228 63.158 0.00 0.00 36.08 6.13
5627 7645 3.106986 TAGGAGCAATGGAGGCGGC 62.107 63.158 0.00 0.00 36.08 6.53
5629 7647 4.838152 GAGCAATGGAGGCGGCGA 62.838 66.667 12.98 0.00 36.08 5.54
5630 7648 4.181010 AGCAATGGAGGCGGCGAT 62.181 61.111 12.98 0.00 36.08 4.58
5631 7649 3.211963 GCAATGGAGGCGGCGATT 61.212 61.111 12.98 0.00 0.00 3.34
5632 7650 3.025619 CAATGGAGGCGGCGATTC 58.974 61.111 12.98 6.83 0.00 2.52
5633 7651 1.524621 CAATGGAGGCGGCGATTCT 60.525 57.895 12.98 3.97 0.00 2.40
5634 7652 1.524621 AATGGAGGCGGCGATTCTG 60.525 57.895 12.98 0.00 0.00 3.02
5635 7653 1.971505 AATGGAGGCGGCGATTCTGA 61.972 55.000 12.98 0.00 0.00 3.27
5636 7654 1.762522 ATGGAGGCGGCGATTCTGAT 61.763 55.000 12.98 1.03 0.00 2.90
5637 7655 1.666234 GGAGGCGGCGATTCTGATC 60.666 63.158 12.98 0.00 0.00 2.92
5638 7656 1.365633 GAGGCGGCGATTCTGATCT 59.634 57.895 12.98 0.00 0.00 2.75
5639 7657 0.943359 GAGGCGGCGATTCTGATCTG 60.943 60.000 12.98 0.00 0.00 2.90
5640 7658 1.958205 GGCGGCGATTCTGATCTGG 60.958 63.158 12.98 0.00 0.00 3.86
5641 7659 1.958205 GCGGCGATTCTGATCTGGG 60.958 63.158 12.98 0.00 0.00 4.45
5642 7660 1.742146 CGGCGATTCTGATCTGGGA 59.258 57.895 0.00 0.00 0.00 4.37
5643 7661 0.319728 CGGCGATTCTGATCTGGGAT 59.680 55.000 0.00 0.00 0.00 3.85
5644 7662 1.805869 GGCGATTCTGATCTGGGATG 58.194 55.000 0.00 0.00 0.00 3.51
5645 7663 1.610102 GGCGATTCTGATCTGGGATGG 60.610 57.143 0.00 0.00 0.00 3.51
5646 7664 1.610102 GCGATTCTGATCTGGGATGGG 60.610 57.143 0.00 0.00 0.00 4.00
5647 7665 1.973515 CGATTCTGATCTGGGATGGGA 59.026 52.381 0.00 0.00 0.00 4.37
5648 7666 2.028294 CGATTCTGATCTGGGATGGGAG 60.028 54.545 0.00 0.00 0.00 4.30
5649 7667 1.135094 TTCTGATCTGGGATGGGAGC 58.865 55.000 0.00 0.00 0.00 4.70
5650 7668 0.030807 TCTGATCTGGGATGGGAGCA 60.031 55.000 0.00 0.00 0.00 4.26
5651 7669 0.108207 CTGATCTGGGATGGGAGCAC 59.892 60.000 0.00 0.00 0.00 4.40
5652 7670 1.070445 GATCTGGGATGGGAGCACG 59.930 63.158 0.00 0.00 0.00 5.34
5653 7671 3.112205 ATCTGGGATGGGAGCACGC 62.112 63.158 0.00 0.00 0.00 5.34
5657 7675 4.148825 GGATGGGAGCACGCGTCT 62.149 66.667 9.86 10.16 42.24 4.18
5658 7676 2.125512 GATGGGAGCACGCGTCTT 60.126 61.111 9.86 0.00 40.37 3.01
5659 7677 2.434884 ATGGGAGCACGCGTCTTG 60.435 61.111 9.86 0.00 0.00 3.02
5665 7683 3.482783 GCACGCGTCTTGCTCCTC 61.483 66.667 9.86 0.00 43.27 3.71
5666 7684 2.259818 CACGCGTCTTGCTCCTCT 59.740 61.111 9.86 0.00 43.27 3.69
5667 7685 2.091112 CACGCGTCTTGCTCCTCTG 61.091 63.158 9.86 0.00 43.27 3.35
5668 7686 2.259818 CGCGTCTTGCTCCTCTGT 59.740 61.111 0.00 0.00 43.27 3.41
5669 7687 1.373497 CGCGTCTTGCTCCTCTGTT 60.373 57.895 0.00 0.00 43.27 3.16
5670 7688 0.946221 CGCGTCTTGCTCCTCTGTTT 60.946 55.000 0.00 0.00 43.27 2.83
5671 7689 0.793250 GCGTCTTGCTCCTCTGTTTC 59.207 55.000 0.00 0.00 41.73 2.78
5672 7690 1.063806 CGTCTTGCTCCTCTGTTTCG 58.936 55.000 0.00 0.00 0.00 3.46
5673 7691 1.603172 CGTCTTGCTCCTCTGTTTCGT 60.603 52.381 0.00 0.00 0.00 3.85
5674 7692 1.795286 GTCTTGCTCCTCTGTTTCGTG 59.205 52.381 0.00 0.00 0.00 4.35
5675 7693 0.514691 CTTGCTCCTCTGTTTCGTGC 59.485 55.000 0.00 0.00 0.00 5.34
5676 7694 0.106708 TTGCTCCTCTGTTTCGTGCT 59.893 50.000 0.00 0.00 0.00 4.40
5677 7695 0.966179 TGCTCCTCTGTTTCGTGCTA 59.034 50.000 0.00 0.00 0.00 3.49
5678 7696 1.067565 TGCTCCTCTGTTTCGTGCTAG 60.068 52.381 0.00 0.00 0.00 3.42
5679 7697 1.202582 GCTCCTCTGTTTCGTGCTAGA 59.797 52.381 0.00 0.00 0.00 2.43
5680 7698 2.733858 GCTCCTCTGTTTCGTGCTAGAG 60.734 54.545 0.00 0.00 37.11 2.43
5681 7699 2.750166 CTCCTCTGTTTCGTGCTAGAGA 59.250 50.000 0.00 0.00 39.13 3.10
5682 7700 2.750166 TCCTCTGTTTCGTGCTAGAGAG 59.250 50.000 0.00 0.00 39.13 3.20
5691 7709 3.313874 GCTAGAGAGCTGGCCCAA 58.686 61.111 0.00 0.00 45.98 4.12
5692 7710 1.835693 GCTAGAGAGCTGGCCCAAT 59.164 57.895 0.00 0.00 45.98 3.16
5693 7711 1.051812 GCTAGAGAGCTGGCCCAATA 58.948 55.000 0.00 0.00 45.98 1.90
5694 7712 1.001860 GCTAGAGAGCTGGCCCAATAG 59.998 57.143 0.00 0.00 45.98 1.73
5695 7713 1.622811 CTAGAGAGCTGGCCCAATAGG 59.377 57.143 0.00 0.00 39.47 2.57
5709 7727 4.086457 CCCAATAGGCCCATTATGTAACC 58.914 47.826 0.00 0.00 0.00 2.85
5710 7728 4.086457 CCAATAGGCCCATTATGTAACCC 58.914 47.826 0.00 0.00 0.00 4.11
5711 7729 4.202673 CCAATAGGCCCATTATGTAACCCT 60.203 45.833 0.00 0.00 0.00 4.34
5712 7730 5.014755 CCAATAGGCCCATTATGTAACCCTA 59.985 44.000 0.00 0.00 0.00 3.53
5713 7731 6.180472 CAATAGGCCCATTATGTAACCCTAG 58.820 44.000 0.00 0.00 0.00 3.02
5714 7732 2.375509 AGGCCCATTATGTAACCCTAGC 59.624 50.000 0.00 0.00 0.00 3.42
5715 7733 2.375509 GGCCCATTATGTAACCCTAGCT 59.624 50.000 0.00 0.00 0.00 3.32
5716 7734 3.181433 GGCCCATTATGTAACCCTAGCTT 60.181 47.826 0.00 0.00 0.00 3.74
5717 7735 4.072839 GCCCATTATGTAACCCTAGCTTC 58.927 47.826 0.00 0.00 0.00 3.86
5718 7736 4.652822 CCCATTATGTAACCCTAGCTTCC 58.347 47.826 0.00 0.00 0.00 3.46
5719 7737 4.104102 CCCATTATGTAACCCTAGCTTCCA 59.896 45.833 0.00 0.00 0.00 3.53
5720 7738 5.398581 CCCATTATGTAACCCTAGCTTCCAA 60.399 44.000 0.00 0.00 0.00 3.53
5721 7739 6.126409 CCATTATGTAACCCTAGCTTCCAAA 58.874 40.000 0.00 0.00 0.00 3.28
5722 7740 6.777580 CCATTATGTAACCCTAGCTTCCAAAT 59.222 38.462 0.00 0.00 0.00 2.32
5723 7741 7.942341 CCATTATGTAACCCTAGCTTCCAAATA 59.058 37.037 0.00 0.00 0.00 1.40
5724 7742 9.349713 CATTATGTAACCCTAGCTTCCAAATAA 57.650 33.333 0.00 0.00 0.00 1.40
5725 7743 9.930158 ATTATGTAACCCTAGCTTCCAAATAAA 57.070 29.630 0.00 0.00 0.00 1.40
5726 7744 9.756571 TTATGTAACCCTAGCTTCCAAATAAAA 57.243 29.630 0.00 0.00 0.00 1.52
5727 7745 8.838649 ATGTAACCCTAGCTTCCAAATAAAAT 57.161 30.769 0.00 0.00 0.00 1.82
5728 7746 8.288689 TGTAACCCTAGCTTCCAAATAAAATC 57.711 34.615 0.00 0.00 0.00 2.17
5729 7747 6.791867 AACCCTAGCTTCCAAATAAAATCC 57.208 37.500 0.00 0.00 0.00 3.01
5730 7748 5.837829 ACCCTAGCTTCCAAATAAAATCCA 58.162 37.500 0.00 0.00 0.00 3.41
5731 7749 6.260663 ACCCTAGCTTCCAAATAAAATCCAA 58.739 36.000 0.00 0.00 0.00 3.53
5732 7750 6.728632 ACCCTAGCTTCCAAATAAAATCCAAA 59.271 34.615 0.00 0.00 0.00 3.28
5733 7751 7.041721 CCCTAGCTTCCAAATAAAATCCAAAC 58.958 38.462 0.00 0.00 0.00 2.93
5734 7752 7.041721 CCTAGCTTCCAAATAAAATCCAAACC 58.958 38.462 0.00 0.00 0.00 3.27
5735 7753 5.478407 AGCTTCCAAATAAAATCCAAACCG 58.522 37.500 0.00 0.00 0.00 4.44
5736 7754 5.011635 AGCTTCCAAATAAAATCCAAACCGT 59.988 36.000 0.00 0.00 0.00 4.83
5737 7755 5.347635 GCTTCCAAATAAAATCCAAACCGTC 59.652 40.000 0.00 0.00 0.00 4.79
5738 7756 5.394224 TCCAAATAAAATCCAAACCGTCC 57.606 39.130 0.00 0.00 0.00 4.79
5739 7757 4.833380 TCCAAATAAAATCCAAACCGTCCA 59.167 37.500 0.00 0.00 0.00 4.02
5740 7758 5.482175 TCCAAATAAAATCCAAACCGTCCAT 59.518 36.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 126 2.485795 TTTTGCACTGGTGGACGCC 61.486 57.895 2.84 0.00 0.00 5.68
156 159 3.007635 GTGGTATGCACACCCTCTTTAC 58.992 50.000 12.63 0.00 37.84 2.01
188 198 1.899814 GTGACATGGTGGACCTCTACA 59.100 52.381 0.00 0.00 36.82 2.74
451 500 0.042448 GGATTCGTGGTTAATCGCGC 60.042 55.000 16.69 0.00 40.07 6.86
495 545 2.607771 GCGTAGTTTCGTCCCTGTAACA 60.608 50.000 0.00 0.00 0.00 2.41
514 564 1.193203 CCTAGTATGCGATGCTTTGCG 59.807 52.381 7.28 0.00 34.71 4.85
582 633 9.582431 CGTCTTCTTCTTATCACCAAGTATAAA 57.418 33.333 0.00 0.00 0.00 1.40
583 634 8.746530 ACGTCTTCTTCTTATCACCAAGTATAA 58.253 33.333 0.00 0.00 0.00 0.98
584 635 8.289939 ACGTCTTCTTCTTATCACCAAGTATA 57.710 34.615 0.00 0.00 0.00 1.47
585 636 7.093902 TGACGTCTTCTTCTTATCACCAAGTAT 60.094 37.037 17.92 0.00 0.00 2.12
586 637 6.208007 TGACGTCTTCTTCTTATCACCAAGTA 59.792 38.462 17.92 0.00 0.00 2.24
596 647 4.825546 ACGTCTTGACGTCTTCTTCTTA 57.174 40.909 21.04 0.00 43.43 2.10
610 661 1.954382 TCGATCCCATCCTACGTCTTG 59.046 52.381 0.00 0.00 0.00 3.02
617 668 2.168496 GGTCGATTCGATCCCATCCTA 58.832 52.381 12.54 0.00 38.42 2.94
627 678 1.006825 CTGCGTGTTGGTCGATTCGA 61.007 55.000 4.29 4.29 0.00 3.71
637 688 1.302431 TCCACCATCCTGCGTGTTG 60.302 57.895 0.00 0.00 0.00 3.33
649 700 2.159099 GCTCGATCTTGTATGTCCACCA 60.159 50.000 0.00 0.00 0.00 4.17
788 860 2.427506 CTCCTGCTATAAATTCCCGGC 58.572 52.381 0.00 0.00 0.00 6.13
790 862 2.069273 CGCTCCTGCTATAAATTCCCG 58.931 52.381 0.00 0.00 36.97 5.14
793 865 1.807142 GGCCGCTCCTGCTATAAATTC 59.193 52.381 0.00 0.00 36.97 2.17
794 866 1.142870 TGGCCGCTCCTGCTATAAATT 59.857 47.619 0.00 0.00 36.97 1.82
795 867 0.764890 TGGCCGCTCCTGCTATAAAT 59.235 50.000 0.00 0.00 36.97 1.40
836 908 2.851801 TCCACGACAGGACCCTCT 59.148 61.111 0.00 0.00 31.23 3.69
887 985 1.000359 GGCCCAGCCCAATAACAGT 60.000 57.895 0.00 0.00 44.06 3.55
933 1031 0.036875 AGCGGGAGGGAAGAAAACAG 59.963 55.000 0.00 0.00 0.00 3.16
934 1032 0.036306 GAGCGGGAGGGAAGAAAACA 59.964 55.000 0.00 0.00 0.00 2.83
936 1034 0.840722 AGGAGCGGGAGGGAAGAAAA 60.841 55.000 0.00 0.00 0.00 2.29
937 1035 1.229529 AGGAGCGGGAGGGAAGAAA 60.230 57.895 0.00 0.00 0.00 2.52
938 1036 1.686110 GAGGAGCGGGAGGGAAGAA 60.686 63.158 0.00 0.00 0.00 2.52
963 1077 1.183030 GGTTTCGGGGGTTTTGGGAG 61.183 60.000 0.00 0.00 0.00 4.30
968 1082 2.202053 GGGGGTTTCGGGGGTTTT 59.798 61.111 0.00 0.00 0.00 2.43
1118 1236 3.129502 CATGTGTGGGCAGCGAGG 61.130 66.667 0.00 0.00 0.00 4.63
1119 1237 3.807538 GCATGTGTGGGCAGCGAG 61.808 66.667 0.00 0.00 0.00 5.03
1417 1535 2.347490 GAGCTTGGACGCTTGGGA 59.653 61.111 0.00 0.00 41.08 4.37
1529 1651 1.386412 CGGCGATGTTGACAAAAATGC 59.614 47.619 0.00 0.00 0.00 3.56
1547 1670 0.319469 AAAACAGGGAAAATGCGCGG 60.319 50.000 8.83 0.00 0.00 6.46
1622 1745 3.499737 GACGCGGGAAGGCACATG 61.500 66.667 12.47 0.00 0.00 3.21
1633 1756 0.508641 CTTGACAAGACAAGACGCGG 59.491 55.000 12.47 0.00 46.85 6.46
1939 2076 3.379372 CAGTTGACAGCCCCATAGAAATG 59.621 47.826 0.00 0.00 0.00 2.32
1995 2132 0.180171 AGTTGTGTGTGCAGCCTACA 59.820 50.000 0.00 0.00 0.00 2.74
2104 2241 9.956640 ATGAAGAGAGAAGAACAAATTACAGAT 57.043 29.630 0.00 0.00 0.00 2.90
2108 2245 7.094634 TGCCATGAAGAGAGAAGAACAAATTAC 60.095 37.037 0.00 0.00 0.00 1.89
2132 2269 9.774742 ATAAAGTTGACGATCTAAATCTTTTGC 57.225 29.630 0.00 0.00 0.00 3.68
2246 2383 5.757886 TCGCTGAAACCATTTCTACTTTTG 58.242 37.500 3.19 0.00 40.32 2.44
2267 2404 6.367695 TGAGGACACAAACATACAGTTATTCG 59.632 38.462 0.00 0.00 40.26 3.34
2268 2405 7.519002 GTGAGGACACAAACATACAGTTATTC 58.481 38.462 0.00 0.00 45.32 1.75
2330 2467 7.027161 TCTTGTGTTGTTTTAGAAAGCAGAAC 58.973 34.615 0.00 0.00 30.82 3.01
2354 2491 2.936553 GCCATCAATTGCCAAACCCTTC 60.937 50.000 0.00 0.00 0.00 3.46
2522 2990 9.474920 TCAGAAAACATAACCAAATTCATCAAC 57.525 29.630 0.00 0.00 0.00 3.18
2526 2994 8.090214 CCAGTCAGAAAACATAACCAAATTCAT 58.910 33.333 0.00 0.00 0.00 2.57
2575 3043 3.318839 CAGGACAGGTCTGCAATTCAAAA 59.681 43.478 0.00 0.00 0.00 2.44
2765 3233 3.149196 TGAGACATTTTCTGGAACTGGC 58.851 45.455 0.00 0.00 33.22 4.85
2882 3351 5.420725 AATGGTGCATAGTTCAGTGTAGA 57.579 39.130 0.00 0.00 0.00 2.59
2907 3376 4.735873 GCGTCTCATCTCAATCAGATCACA 60.736 45.833 0.00 0.00 40.20 3.58
2908 3377 3.735240 GCGTCTCATCTCAATCAGATCAC 59.265 47.826 0.00 0.00 40.20 3.06
2910 3379 2.979151 CGCGTCTCATCTCAATCAGATC 59.021 50.000 0.00 0.00 40.20 2.75
2911 3380 2.288091 CCGCGTCTCATCTCAATCAGAT 60.288 50.000 4.92 0.00 43.33 2.90
2912 3381 1.066152 CCGCGTCTCATCTCAATCAGA 59.934 52.381 4.92 0.00 34.78 3.27
2913 3382 1.485397 CCGCGTCTCATCTCAATCAG 58.515 55.000 4.92 0.00 0.00 2.90
2914 3383 0.528466 GCCGCGTCTCATCTCAATCA 60.528 55.000 4.92 0.00 0.00 2.57
2915 3384 1.218230 GGCCGCGTCTCATCTCAATC 61.218 60.000 4.92 0.00 0.00 2.67
2916 3385 1.227380 GGCCGCGTCTCATCTCAAT 60.227 57.895 4.92 0.00 0.00 2.57
2917 3386 2.166130 TTGGCCGCGTCTCATCTCAA 62.166 55.000 4.92 0.00 0.00 3.02
3063 3532 5.012664 TGAACAGGACAGTGCTAGGATTAAA 59.987 40.000 0.00 0.00 0.00 1.52
3178 3647 4.925390 AGCTCTTCCATTTCTCTCCTTT 57.075 40.909 0.00 0.00 0.00 3.11
3255 3724 5.577164 ACATAGTTTGCGTTATCTGTCACTC 59.423 40.000 0.00 0.00 0.00 3.51
3278 3747 7.988904 AAGTAAAGCGACTCAATAGATACAC 57.011 36.000 0.00 0.00 0.00 2.90
3337 3932 2.560105 AGCTGGAAGTCCTGATTTTTGC 59.440 45.455 8.31 0.00 37.15 3.68
3343 3938 7.658525 CAGATATATAGCTGGAAGTCCTGAT 57.341 40.000 18.39 4.44 36.15 2.90
3482 4695 1.488390 TGGGACGGAGGGTGTATTAC 58.512 55.000 0.00 0.00 0.00 1.89
3524 4738 4.334203 AGTTTGTGAACATTGACTTACGCA 59.666 37.500 0.00 0.00 38.26 5.24
3720 4938 4.682778 TCCTCCGTCCCAAAATATAGTG 57.317 45.455 0.00 0.00 0.00 2.74
3721 4939 4.720273 ACTTCCTCCGTCCCAAAATATAGT 59.280 41.667 0.00 0.00 0.00 2.12
3864 5085 6.892658 AACATGTTATGGTTTGAACTAGCA 57.107 33.333 9.97 0.00 33.60 3.49
3890 5111 8.434392 ACTCCTAACACAAGTTCAAATTACCTA 58.566 33.333 0.00 0.00 39.15 3.08
3981 5208 8.001292 TCTTATATCAGAAGTCACCATCTCTCA 58.999 37.037 0.00 0.00 0.00 3.27
3986 5213 7.540400 CGACATCTTATATCAGAAGTCACCATC 59.460 40.741 17.77 0.00 40.18 3.51
3997 5224 8.648557 TTTTTGGACTCGACATCTTATATCAG 57.351 34.615 0.00 0.00 0.00 2.90
4022 5249 7.944729 AATTGCAGTAACCAGATGTATTTCT 57.055 32.000 0.00 0.00 0.00 2.52
4057 5333 9.832445 GGTATATGATTCTTTTAGTGGAGTTGA 57.168 33.333 0.00 0.00 0.00 3.18
4103 5379 5.627499 TGACATGATTTGCCAGTTACTTC 57.373 39.130 0.00 0.00 0.00 3.01
4138 5414 8.980610 TCACAACAAATGAAAAATCTGCATTAG 58.019 29.630 0.00 0.00 32.39 1.73
4198 5474 7.870445 CCAGAAGTAGGATAGCAGAAATAACTC 59.130 40.741 0.00 0.00 0.00 3.01
4327 5603 4.922692 CCAACACAAACGTATGCATTTGAT 59.077 37.500 15.53 2.85 38.82 2.57
4688 6696 5.627499 TGTTCTCTCCATTATGCAACAAC 57.373 39.130 0.00 0.00 0.00 3.32
4701 6709 7.440523 AACAAGTCACATTAATGTTCTCTCC 57.559 36.000 18.50 3.61 39.39 3.71
4717 6725 4.321156 GCCACATATGCAAAGAACAAGTCA 60.321 41.667 1.58 0.00 0.00 3.41
4893 6904 5.467035 CAAGGGAAATTGCAAACCTTCTA 57.533 39.130 19.10 0.00 39.40 2.10
4991 7002 6.850317 CCTTTTAATTTGCACAAAATGGTTCG 59.150 34.615 0.00 0.00 38.52 3.95
5009 7020 8.475639 AGCAACTATCTATTCGAGACCTTTTAA 58.524 33.333 0.00 0.00 36.87 1.52
5011 7022 6.879400 AGCAACTATCTATTCGAGACCTTTT 58.121 36.000 0.00 0.00 36.87 2.27
5012 7023 6.472686 AGCAACTATCTATTCGAGACCTTT 57.527 37.500 0.00 0.00 36.87 3.11
5013 7024 6.472686 AAGCAACTATCTATTCGAGACCTT 57.527 37.500 0.00 0.00 36.87 3.50
5021 7035 7.527084 AACAAGTCGAAGCAACTATCTATTC 57.473 36.000 0.00 0.00 0.00 1.75
5056 7070 6.153340 ACACATGGCAGCAATTAATACTTCTT 59.847 34.615 0.00 0.00 0.00 2.52
5089 7103 0.107993 TCCTTCAATGCTGCCTCTCG 60.108 55.000 0.00 0.00 0.00 4.04
5105 7122 1.146566 GGAATTCCATGGCCTCATCCT 59.853 52.381 20.04 0.00 35.64 3.24
5180 7197 3.603532 TCAATGCTGAGTCTCAACCATC 58.396 45.455 13.27 0.00 0.00 3.51
5212 7229 1.251527 GCTTCTCCCTCACCTGACGA 61.252 60.000 0.00 0.00 0.00 4.20
5237 7254 2.578940 CACTATCCCCTGGTTAAACCCA 59.421 50.000 0.00 0.00 37.50 4.51
5259 7276 0.176680 CTCCATACTGACGCCAGCTT 59.823 55.000 0.00 0.00 44.16 3.74
5270 7287 0.394565 GCGGCCTTGATCTCCATACT 59.605 55.000 0.00 0.00 0.00 2.12
5300 7317 7.977818 TGTAGCTTCCAATATCATAGAATGGT 58.022 34.615 0.00 0.00 32.90 3.55
5326 7343 1.443407 GCTTCTCCCGATGCTGCTA 59.557 57.895 0.00 0.00 37.35 3.49
5392 7410 2.095718 GCTAGGCGACTCAAAAACCTTG 60.096 50.000 0.00 0.00 43.67 3.61
5393 7411 2.152016 GCTAGGCGACTCAAAAACCTT 58.848 47.619 0.00 0.00 43.67 3.50
5394 7412 1.610886 GGCTAGGCGACTCAAAAACCT 60.611 52.381 0.00 0.00 43.67 3.50
5395 7413 0.803117 GGCTAGGCGACTCAAAAACC 59.197 55.000 0.00 0.00 43.67 3.27
5396 7414 1.519408 TGGCTAGGCGACTCAAAAAC 58.481 50.000 12.19 0.00 43.67 2.43
5397 7415 2.151202 CTTGGCTAGGCGACTCAAAAA 58.849 47.619 12.19 0.00 43.67 1.94
5398 7416 1.071699 ACTTGGCTAGGCGACTCAAAA 59.928 47.619 12.19 0.00 43.67 2.44
5399 7417 0.685097 ACTTGGCTAGGCGACTCAAA 59.315 50.000 12.19 0.00 43.67 2.69
5400 7418 0.246635 GACTTGGCTAGGCGACTCAA 59.753 55.000 12.19 0.00 43.67 3.02
5401 7419 1.890894 GACTTGGCTAGGCGACTCA 59.109 57.895 12.19 0.00 43.67 3.41
5402 7420 4.816990 GACTTGGCTAGGCGACTC 57.183 61.111 12.19 4.70 43.67 3.36
5407 7425 1.226717 CGACTCGACTTGGCTAGGC 60.227 63.158 9.85 9.85 0.00 3.93
5408 7426 1.226717 GCGACTCGACTTGGCTAGG 60.227 63.158 1.63 0.00 0.00 3.02
5409 7427 1.226717 GGCGACTCGACTTGGCTAG 60.227 63.158 1.63 0.00 0.00 3.42
5410 7428 1.320344 ATGGCGACTCGACTTGGCTA 61.320 55.000 5.74 0.00 35.04 3.93
5411 7429 2.650116 ATGGCGACTCGACTTGGCT 61.650 57.895 5.74 0.00 35.04 4.75
5412 7430 2.125512 ATGGCGACTCGACTTGGC 60.126 61.111 5.74 0.00 35.04 4.52
5413 7431 2.456119 GCATGGCGACTCGACTTGG 61.456 63.158 18.90 4.56 39.83 3.61
5414 7432 2.456119 GGCATGGCGACTCGACTTG 61.456 63.158 14.39 14.39 41.88 3.16
5415 7433 2.125512 GGCATGGCGACTCGACTT 60.126 61.111 2.41 0.00 35.04 3.01
5416 7434 3.069980 GAGGCATGGCGACTCGACT 62.070 63.158 14.30 0.00 35.04 4.18
5417 7435 2.583593 GAGGCATGGCGACTCGAC 60.584 66.667 14.30 0.00 34.27 4.20
5418 7436 3.838271 GGAGGCATGGCGACTCGA 61.838 66.667 14.30 0.00 32.11 4.04
5420 7438 3.838271 TCGGAGGCATGGCGACTC 61.838 66.667 14.30 6.03 0.00 3.36
5421 7439 4.148825 GTCGGAGGCATGGCGACT 62.149 66.667 14.30 0.00 0.00 4.18
5422 7440 2.685387 CTAGTCGGAGGCATGGCGAC 62.685 65.000 14.30 14.78 0.00 5.19
5423 7441 2.441348 TAGTCGGAGGCATGGCGA 60.441 61.111 14.30 2.15 0.00 5.54
5424 7442 2.028190 CTAGTCGGAGGCATGGCG 59.972 66.667 14.30 0.00 0.00 5.69
5425 7443 1.227380 CACTAGTCGGAGGCATGGC 60.227 63.158 12.14 12.14 0.00 4.40
5426 7444 1.443407 CCACTAGTCGGAGGCATGG 59.557 63.158 0.00 0.00 0.00 3.66
5427 7445 1.227380 GCCACTAGTCGGAGGCATG 60.227 63.158 15.26 0.00 46.26 4.06
5428 7446 3.221222 GCCACTAGTCGGAGGCAT 58.779 61.111 15.26 0.00 46.26 4.40
5431 7449 3.111939 CGAGCCACTAGTCGGAGG 58.888 66.667 13.57 4.36 32.40 4.30
5432 7450 2.115911 AGCGAGCCACTAGTCGGAG 61.116 63.158 13.57 6.56 36.67 4.63
5433 7451 2.045242 AGCGAGCCACTAGTCGGA 60.045 61.111 13.57 0.00 36.67 4.55
5434 7452 2.103143 CAGCGAGCCACTAGTCGG 59.897 66.667 0.00 0.00 36.67 4.79
5435 7453 2.580867 GCAGCGAGCCACTAGTCG 60.581 66.667 0.00 0.00 39.25 4.18
5436 7454 2.343163 ATCGCAGCGAGCCACTAGTC 62.343 60.000 24.08 0.00 39.91 2.59
5437 7455 1.949847 AATCGCAGCGAGCCACTAGT 61.950 55.000 24.08 0.00 39.91 2.57
5438 7456 0.030773 TAATCGCAGCGAGCCACTAG 59.969 55.000 24.08 0.00 39.91 2.57
5439 7457 0.030773 CTAATCGCAGCGAGCCACTA 59.969 55.000 24.08 8.17 39.91 2.74
5440 7458 1.227089 CTAATCGCAGCGAGCCACT 60.227 57.895 24.08 2.31 39.91 4.00
5441 7459 1.483424 GACTAATCGCAGCGAGCCAC 61.483 60.000 24.08 9.52 39.91 5.01
5442 7460 1.226974 GACTAATCGCAGCGAGCCA 60.227 57.895 24.08 9.47 39.91 4.75
5443 7461 1.066587 AGACTAATCGCAGCGAGCC 59.933 57.895 24.08 9.73 39.91 4.70
5444 7462 1.816214 GCAGACTAATCGCAGCGAGC 61.816 60.000 24.08 15.02 39.91 5.03
5445 7463 1.535636 CGCAGACTAATCGCAGCGAG 61.536 60.000 24.08 12.29 43.47 5.03
5446 7464 1.586303 CGCAGACTAATCGCAGCGA 60.586 57.895 22.06 22.06 43.47 4.93
5447 7465 1.586303 TCGCAGACTAATCGCAGCG 60.586 57.895 9.06 9.06 42.73 5.18
5448 7466 4.402192 TCGCAGACTAATCGCAGC 57.598 55.556 0.00 0.00 0.00 5.25
5464 7482 1.779724 GGCGATTAATCACGACGAGTC 59.220 52.381 15.57 0.00 0.00 3.36
5465 7483 1.535437 GGGCGATTAATCACGACGAGT 60.535 52.381 15.57 0.00 38.52 4.18
5466 7484 1.129326 GGGCGATTAATCACGACGAG 58.871 55.000 15.57 0.00 38.52 4.18
5467 7485 0.249155 GGGGCGATTAATCACGACGA 60.249 55.000 15.57 0.00 38.52 4.20
5468 7486 0.528901 TGGGGCGATTAATCACGACG 60.529 55.000 15.57 2.90 38.52 5.12
5469 7487 1.597663 CTTGGGGCGATTAATCACGAC 59.402 52.381 15.57 5.10 36.75 4.34
5470 7488 1.208535 ACTTGGGGCGATTAATCACGA 59.791 47.619 15.57 0.07 0.00 4.35
5471 7489 1.597663 GACTTGGGGCGATTAATCACG 59.402 52.381 15.57 4.34 0.00 4.35
5472 7490 1.597663 CGACTTGGGGCGATTAATCAC 59.402 52.381 15.57 5.60 0.00 3.06
5473 7491 1.948104 CGACTTGGGGCGATTAATCA 58.052 50.000 15.57 0.00 0.00 2.57
5474 7492 0.586802 GCGACTTGGGGCGATTAATC 59.413 55.000 5.30 5.30 0.00 1.75
5475 7493 0.818040 GGCGACTTGGGGCGATTAAT 60.818 55.000 0.00 0.00 0.00 1.40
5476 7494 1.450669 GGCGACTTGGGGCGATTAA 60.451 57.895 0.00 0.00 0.00 1.40
5477 7495 2.188469 GGCGACTTGGGGCGATTA 59.812 61.111 0.00 0.00 0.00 1.75
5478 7496 4.796495 GGGCGACTTGGGGCGATT 62.796 66.667 0.00 0.00 0.00 3.34
5484 7502 4.722700 CACCTGGGGCGACTTGGG 62.723 72.222 0.00 0.00 0.00 4.12
5485 7503 2.119484 TAACACCTGGGGCGACTTGG 62.119 60.000 0.00 0.00 0.00 3.61
5486 7504 0.250553 TTAACACCTGGGGCGACTTG 60.251 55.000 0.00 0.00 0.00 3.16
5487 7505 0.036306 CTTAACACCTGGGGCGACTT 59.964 55.000 0.00 0.00 0.00 3.01
5488 7506 0.834687 TCTTAACACCTGGGGCGACT 60.835 55.000 0.00 0.00 0.00 4.18
5489 7507 0.391263 CTCTTAACACCTGGGGCGAC 60.391 60.000 0.00 0.00 0.00 5.19
5490 7508 1.550130 CCTCTTAACACCTGGGGCGA 61.550 60.000 0.00 0.00 0.00 5.54
5491 7509 1.078426 CCTCTTAACACCTGGGGCG 60.078 63.158 0.00 0.00 0.00 6.13
5492 7510 0.253327 CTCCTCTTAACACCTGGGGC 59.747 60.000 0.00 0.00 0.00 5.80
5493 7511 0.912486 CCTCCTCTTAACACCTGGGG 59.088 60.000 0.00 0.00 0.00 4.96
5494 7512 1.834263 CTCCTCCTCTTAACACCTGGG 59.166 57.143 0.00 0.00 0.00 4.45
5495 7513 1.834263 CCTCCTCCTCTTAACACCTGG 59.166 57.143 0.00 0.00 0.00 4.45
5496 7514 2.763448 CTCCTCCTCCTCTTAACACCTG 59.237 54.545 0.00 0.00 0.00 4.00
5497 7515 2.292587 CCTCCTCCTCCTCTTAACACCT 60.293 54.545 0.00 0.00 0.00 4.00
5498 7516 2.112190 CCTCCTCCTCCTCTTAACACC 58.888 57.143 0.00 0.00 0.00 4.16
5499 7517 3.028130 CTCCTCCTCCTCCTCTTAACAC 58.972 54.545 0.00 0.00 0.00 3.32
5500 7518 2.023888 CCTCCTCCTCCTCCTCTTAACA 60.024 54.545 0.00 0.00 0.00 2.41
5501 7519 2.245287 TCCTCCTCCTCCTCCTCTTAAC 59.755 54.545 0.00 0.00 0.00 2.01
5502 7520 2.516277 CTCCTCCTCCTCCTCCTCTTAA 59.484 54.545 0.00 0.00 0.00 1.85
5503 7521 2.140224 CTCCTCCTCCTCCTCCTCTTA 58.860 57.143 0.00 0.00 0.00 2.10
5504 7522 0.933700 CTCCTCCTCCTCCTCCTCTT 59.066 60.000 0.00 0.00 0.00 2.85
5505 7523 0.998945 CCTCCTCCTCCTCCTCCTCT 60.999 65.000 0.00 0.00 0.00 3.69
5506 7524 1.541672 CCTCCTCCTCCTCCTCCTC 59.458 68.421 0.00 0.00 0.00 3.71
5507 7525 2.018086 CCCTCCTCCTCCTCCTCCT 61.018 68.421 0.00 0.00 0.00 3.69
5508 7526 2.612251 CCCTCCTCCTCCTCCTCC 59.388 72.222 0.00 0.00 0.00 4.30
5509 7527 2.612251 CCCCTCCTCCTCCTCCTC 59.388 72.222 0.00 0.00 0.00 3.71
5510 7528 3.039526 CCCCCTCCTCCTCCTCCT 61.040 72.222 0.00 0.00 0.00 3.69
5511 7529 2.613576 CTTCCCCCTCCTCCTCCTCC 62.614 70.000 0.00 0.00 0.00 4.30
5512 7530 1.074850 CTTCCCCCTCCTCCTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
5513 7531 1.550374 TCTTCCCCCTCCTCCTCCT 60.550 63.158 0.00 0.00 0.00 3.69
5514 7532 1.074850 CTCTTCCCCCTCCTCCTCC 60.075 68.421 0.00 0.00 0.00 4.30
5515 7533 1.074850 CCTCTTCCCCCTCCTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
5516 7534 1.869452 ACCTCTTCCCCCTCCTCCT 60.869 63.158 0.00 0.00 0.00 3.69
5517 7535 1.690985 CACCTCTTCCCCCTCCTCC 60.691 68.421 0.00 0.00 0.00 4.30
5518 7536 2.371259 GCACCTCTTCCCCCTCCTC 61.371 68.421 0.00 0.00 0.00 3.71
5519 7537 2.285743 GCACCTCTTCCCCCTCCT 60.286 66.667 0.00 0.00 0.00 3.69
5520 7538 2.285743 AGCACCTCTTCCCCCTCC 60.286 66.667 0.00 0.00 0.00 4.30
5521 7539 1.492993 AACAGCACCTCTTCCCCCTC 61.493 60.000 0.00 0.00 0.00 4.30
5522 7540 1.464198 AACAGCACCTCTTCCCCCT 60.464 57.895 0.00 0.00 0.00 4.79
5523 7541 1.303643 CAACAGCACCTCTTCCCCC 60.304 63.158 0.00 0.00 0.00 5.40
5524 7542 0.690762 TACAACAGCACCTCTTCCCC 59.309 55.000 0.00 0.00 0.00 4.81
5525 7543 1.339151 CCTACAACAGCACCTCTTCCC 60.339 57.143 0.00 0.00 0.00 3.97
5526 7544 1.946283 GCCTACAACAGCACCTCTTCC 60.946 57.143 0.00 0.00 0.00 3.46
5527 7545 1.443802 GCCTACAACAGCACCTCTTC 58.556 55.000 0.00 0.00 0.00 2.87
5528 7546 0.320771 CGCCTACAACAGCACCTCTT 60.321 55.000 0.00 0.00 0.00 2.85
5529 7547 1.293498 CGCCTACAACAGCACCTCT 59.707 57.895 0.00 0.00 0.00 3.69
5530 7548 1.741770 CCGCCTACAACAGCACCTC 60.742 63.158 0.00 0.00 0.00 3.85
5531 7549 2.172483 CTCCGCCTACAACAGCACCT 62.172 60.000 0.00 0.00 0.00 4.00
5532 7550 1.741770 CTCCGCCTACAACAGCACC 60.742 63.158 0.00 0.00 0.00 5.01
5533 7551 1.741770 CCTCCGCCTACAACAGCAC 60.742 63.158 0.00 0.00 0.00 4.40
5534 7552 1.888436 CTCCTCCGCCTACAACAGCA 61.888 60.000 0.00 0.00 0.00 4.41
5535 7553 1.153549 CTCCTCCGCCTACAACAGC 60.154 63.158 0.00 0.00 0.00 4.40
5536 7554 1.517832 CCTCCTCCGCCTACAACAG 59.482 63.158 0.00 0.00 0.00 3.16
5537 7555 1.987855 CCCTCCTCCGCCTACAACA 60.988 63.158 0.00 0.00 0.00 3.33
5538 7556 2.732619 CCCCTCCTCCGCCTACAAC 61.733 68.421 0.00 0.00 0.00 3.32
5539 7557 2.365105 CCCCTCCTCCGCCTACAA 60.365 66.667 0.00 0.00 0.00 2.41
5540 7558 4.475444 CCCCCTCCTCCGCCTACA 62.475 72.222 0.00 0.00 0.00 2.74
5541 7559 2.998301 CTACCCCCTCCTCCGCCTAC 62.998 70.000 0.00 0.00 0.00 3.18
5542 7560 2.701093 TACCCCCTCCTCCGCCTA 60.701 66.667 0.00 0.00 0.00 3.93
5543 7561 4.159108 CTACCCCCTCCTCCGCCT 62.159 72.222 0.00 0.00 0.00 5.52
5546 7564 4.475444 TGCCTACCCCCTCCTCCG 62.475 72.222 0.00 0.00 0.00 4.63
5547 7565 2.446802 CTGCCTACCCCCTCCTCC 60.447 72.222 0.00 0.00 0.00 4.30
5548 7566 3.164977 GCTGCCTACCCCCTCCTC 61.165 72.222 0.00 0.00 0.00 3.71
5549 7567 3.700350 AGCTGCCTACCCCCTCCT 61.700 66.667 0.00 0.00 0.00 3.69
5550 7568 3.483869 CAGCTGCCTACCCCCTCC 61.484 72.222 0.00 0.00 0.00 4.30
5551 7569 4.182433 GCAGCTGCCTACCCCCTC 62.182 72.222 28.76 0.00 34.31 4.30
5552 7570 4.748798 AGCAGCTGCCTACCCCCT 62.749 66.667 34.39 11.28 43.38 4.79
5553 7571 3.732849 AAGCAGCTGCCTACCCCC 61.733 66.667 34.39 5.26 43.38 5.40
5554 7572 2.439156 CAAGCAGCTGCCTACCCC 60.439 66.667 34.39 6.08 43.38 4.95
5555 7573 2.439156 CCAAGCAGCTGCCTACCC 60.439 66.667 34.39 6.88 43.38 3.69
5556 7574 1.451028 CTCCAAGCAGCTGCCTACC 60.451 63.158 34.39 7.70 43.38 3.18
5557 7575 1.451028 CCTCCAAGCAGCTGCCTAC 60.451 63.158 34.39 8.12 43.38 3.18
5558 7576 0.984961 ATCCTCCAAGCAGCTGCCTA 60.985 55.000 34.39 16.41 43.38 3.93
5559 7577 0.984961 TATCCTCCAAGCAGCTGCCT 60.985 55.000 34.39 20.85 43.38 4.75
5560 7578 0.817229 GTATCCTCCAAGCAGCTGCC 60.817 60.000 34.39 17.05 43.38 4.85
5561 7579 0.179936 AGTATCCTCCAAGCAGCTGC 59.820 55.000 31.53 31.53 42.49 5.25
5562 7580 2.093288 TGAAGTATCCTCCAAGCAGCTG 60.093 50.000 10.11 10.11 0.00 4.24
5563 7581 2.170187 CTGAAGTATCCTCCAAGCAGCT 59.830 50.000 0.00 0.00 0.00 4.24
5564 7582 2.559440 CTGAAGTATCCTCCAAGCAGC 58.441 52.381 0.00 0.00 0.00 5.25
5565 7583 2.170187 AGCTGAAGTATCCTCCAAGCAG 59.830 50.000 0.00 0.00 0.00 4.24
5566 7584 2.169352 GAGCTGAAGTATCCTCCAAGCA 59.831 50.000 0.00 0.00 0.00 3.91
5567 7585 2.801342 CGAGCTGAAGTATCCTCCAAGC 60.801 54.545 0.00 0.00 0.00 4.01
5568 7586 2.223923 CCGAGCTGAAGTATCCTCCAAG 60.224 54.545 0.00 0.00 0.00 3.61
5569 7587 1.757118 CCGAGCTGAAGTATCCTCCAA 59.243 52.381 0.00 0.00 0.00 3.53
5570 7588 1.063942 TCCGAGCTGAAGTATCCTCCA 60.064 52.381 0.00 0.00 0.00 3.86
5571 7589 1.611491 CTCCGAGCTGAAGTATCCTCC 59.389 57.143 0.00 0.00 0.00 4.30
5572 7590 2.577700 TCTCCGAGCTGAAGTATCCTC 58.422 52.381 0.00 0.00 0.00 3.71
5573 7591 2.738587 TCTCCGAGCTGAAGTATCCT 57.261 50.000 0.00 0.00 0.00 3.24
5574 7592 2.035321 CCTTCTCCGAGCTGAAGTATCC 59.965 54.545 9.84 0.00 38.30 2.59
5575 7593 2.544903 GCCTTCTCCGAGCTGAAGTATC 60.545 54.545 9.84 0.00 38.30 2.24
5576 7594 1.410882 GCCTTCTCCGAGCTGAAGTAT 59.589 52.381 9.84 0.00 38.30 2.12
5577 7595 0.818296 GCCTTCTCCGAGCTGAAGTA 59.182 55.000 9.84 0.00 38.30 2.24
5578 7596 1.188219 TGCCTTCTCCGAGCTGAAGT 61.188 55.000 9.84 0.00 38.30 3.01
5579 7597 0.459934 CTGCCTTCTCCGAGCTGAAG 60.460 60.000 0.00 0.00 39.32 3.02
5580 7598 1.593787 CTGCCTTCTCCGAGCTGAA 59.406 57.895 0.00 0.00 0.00 3.02
5581 7599 3.011635 GCTGCCTTCTCCGAGCTGA 62.012 63.158 0.00 0.00 0.00 4.26
5582 7600 2.511145 GCTGCCTTCTCCGAGCTG 60.511 66.667 0.00 0.00 0.00 4.24
5583 7601 2.999648 TGCTGCCTTCTCCGAGCT 61.000 61.111 0.00 0.00 32.41 4.09
5584 7602 2.511145 CTGCTGCCTTCTCCGAGC 60.511 66.667 0.00 0.00 0.00 5.03
5585 7603 2.511145 GCTGCTGCCTTCTCCGAG 60.511 66.667 3.85 0.00 0.00 4.63
5586 7604 3.306595 CTGCTGCTGCCTTCTCCGA 62.307 63.158 13.47 0.00 38.71 4.55
5587 7605 2.818714 CTGCTGCTGCCTTCTCCG 60.819 66.667 13.47 0.00 38.71 4.63
5588 7606 3.132801 GCTGCTGCTGCCTTCTCC 61.133 66.667 19.30 0.00 38.71 3.71
5589 7607 3.132801 GGCTGCTGCTGCCTTCTC 61.133 66.667 34.54 14.47 43.62 2.87
5594 7612 2.823147 CTACAGGCTGCTGCTGCC 60.823 66.667 34.80 34.80 46.61 4.85
5595 7613 2.823147 CCTACAGGCTGCTGCTGC 60.823 66.667 21.42 21.42 39.59 5.25
5596 7614 1.153409 CTCCTACAGGCTGCTGCTG 60.153 63.158 15.89 13.21 39.59 4.41
5597 7615 3.028921 GCTCCTACAGGCTGCTGCT 62.029 63.158 15.89 0.00 39.59 4.24
5598 7616 2.513435 GCTCCTACAGGCTGCTGC 60.513 66.667 15.89 7.10 38.76 5.25
5599 7617 0.107312 ATTGCTCCTACAGGCTGCTG 60.107 55.000 15.89 7.41 36.10 4.41
5600 7618 0.107312 CATTGCTCCTACAGGCTGCT 60.107 55.000 15.89 4.57 36.10 4.24
5601 7619 1.099879 CCATTGCTCCTACAGGCTGC 61.100 60.000 15.89 0.00 35.83 5.25
5602 7620 0.543277 TCCATTGCTCCTACAGGCTG 59.457 55.000 14.16 14.16 34.44 4.85
5603 7621 0.835941 CTCCATTGCTCCTACAGGCT 59.164 55.000 0.00 0.00 34.44 4.58
5604 7622 0.179034 CCTCCATTGCTCCTACAGGC 60.179 60.000 0.00 0.00 34.44 4.85
5605 7623 0.179034 GCCTCCATTGCTCCTACAGG 60.179 60.000 0.00 0.00 0.00 4.00
5606 7624 0.531532 CGCCTCCATTGCTCCTACAG 60.532 60.000 0.00 0.00 0.00 2.74
5607 7625 1.522092 CGCCTCCATTGCTCCTACA 59.478 57.895 0.00 0.00 0.00 2.74
5608 7626 1.227674 CCGCCTCCATTGCTCCTAC 60.228 63.158 0.00 0.00 0.00 3.18
5609 7627 3.106986 GCCGCCTCCATTGCTCCTA 62.107 63.158 0.00 0.00 0.00 2.94
5610 7628 4.496336 GCCGCCTCCATTGCTCCT 62.496 66.667 0.00 0.00 0.00 3.69
5612 7630 4.838152 TCGCCGCCTCCATTGCTC 62.838 66.667 0.00 0.00 0.00 4.26
5613 7631 3.704231 AATCGCCGCCTCCATTGCT 62.704 57.895 0.00 0.00 0.00 3.91
5614 7632 3.186390 GAATCGCCGCCTCCATTGC 62.186 63.158 0.00 0.00 0.00 3.56
5615 7633 1.524621 AGAATCGCCGCCTCCATTG 60.525 57.895 0.00 0.00 0.00 2.82
5616 7634 1.524621 CAGAATCGCCGCCTCCATT 60.525 57.895 0.00 0.00 0.00 3.16
5617 7635 1.762522 ATCAGAATCGCCGCCTCCAT 61.763 55.000 0.00 0.00 0.00 3.41
5618 7636 2.369257 GATCAGAATCGCCGCCTCCA 62.369 60.000 0.00 0.00 0.00 3.86
5619 7637 1.666234 GATCAGAATCGCCGCCTCC 60.666 63.158 0.00 0.00 0.00 4.30
5620 7638 0.943359 CAGATCAGAATCGCCGCCTC 60.943 60.000 0.00 0.00 36.97 4.70
5621 7639 1.068753 CAGATCAGAATCGCCGCCT 59.931 57.895 0.00 0.00 36.97 5.52
5622 7640 1.958205 CCAGATCAGAATCGCCGCC 60.958 63.158 0.00 0.00 36.97 6.13
5623 7641 1.958205 CCCAGATCAGAATCGCCGC 60.958 63.158 0.00 0.00 36.97 6.53
5624 7642 0.319728 ATCCCAGATCAGAATCGCCG 59.680 55.000 0.00 0.00 36.97 6.46
5625 7643 1.610102 CCATCCCAGATCAGAATCGCC 60.610 57.143 0.00 0.00 36.97 5.54
5626 7644 1.610102 CCCATCCCAGATCAGAATCGC 60.610 57.143 0.00 0.00 36.97 4.58
5627 7645 1.973515 TCCCATCCCAGATCAGAATCG 59.026 52.381 0.00 0.00 36.97 3.34
5628 7646 2.290197 GCTCCCATCCCAGATCAGAATC 60.290 54.545 0.00 0.00 0.00 2.52
5629 7647 1.704070 GCTCCCATCCCAGATCAGAAT 59.296 52.381 0.00 0.00 0.00 2.40
5630 7648 1.135094 GCTCCCATCCCAGATCAGAA 58.865 55.000 0.00 0.00 0.00 3.02
5631 7649 0.030807 TGCTCCCATCCCAGATCAGA 60.031 55.000 0.00 0.00 0.00 3.27
5632 7650 0.108207 GTGCTCCCATCCCAGATCAG 59.892 60.000 0.00 0.00 0.00 2.90
5633 7651 1.689243 CGTGCTCCCATCCCAGATCA 61.689 60.000 0.00 0.00 0.00 2.92
5634 7652 1.070445 CGTGCTCCCATCCCAGATC 59.930 63.158 0.00 0.00 0.00 2.75
5635 7653 3.112205 GCGTGCTCCCATCCCAGAT 62.112 63.158 0.00 0.00 0.00 2.90
5636 7654 3.785859 GCGTGCTCCCATCCCAGA 61.786 66.667 0.00 0.00 0.00 3.86
5640 7658 3.665675 AAGACGCGTGCTCCCATCC 62.666 63.158 20.70 0.00 0.00 3.51
5641 7659 2.125512 AAGACGCGTGCTCCCATC 60.126 61.111 20.70 0.00 0.00 3.51
5642 7660 2.434884 CAAGACGCGTGCTCCCAT 60.435 61.111 20.70 0.00 0.00 4.00
5652 7670 0.793250 GAAACAGAGGAGCAAGACGC 59.207 55.000 0.00 0.00 42.91 5.19
5653 7671 1.063806 CGAAACAGAGGAGCAAGACG 58.936 55.000 0.00 0.00 0.00 4.18
5654 7672 1.795286 CACGAAACAGAGGAGCAAGAC 59.205 52.381 0.00 0.00 0.00 3.01
5655 7673 1.873903 GCACGAAACAGAGGAGCAAGA 60.874 52.381 0.00 0.00 0.00 3.02
5656 7674 0.514691 GCACGAAACAGAGGAGCAAG 59.485 55.000 0.00 0.00 0.00 4.01
5657 7675 0.106708 AGCACGAAACAGAGGAGCAA 59.893 50.000 0.00 0.00 0.00 3.91
5658 7676 0.966179 TAGCACGAAACAGAGGAGCA 59.034 50.000 0.00 0.00 0.00 4.26
5659 7677 1.202582 TCTAGCACGAAACAGAGGAGC 59.797 52.381 0.00 0.00 0.00 4.70
5660 7678 2.750166 TCTCTAGCACGAAACAGAGGAG 59.250 50.000 0.00 0.00 36.11 3.69
5661 7679 2.750166 CTCTCTAGCACGAAACAGAGGA 59.250 50.000 0.00 0.00 36.11 3.71
5662 7680 3.143807 CTCTCTAGCACGAAACAGAGG 57.856 52.381 0.00 0.00 36.11 3.69
5675 7693 1.622811 CCTATTGGGCCAGCTCTCTAG 59.377 57.143 6.23 2.73 0.00 2.43
5676 7694 1.722034 CCTATTGGGCCAGCTCTCTA 58.278 55.000 6.23 0.00 0.00 2.43
5677 7695 2.537600 CCTATTGGGCCAGCTCTCT 58.462 57.895 6.23 0.00 0.00 3.10
5687 7705 4.086457 GGTTACATAATGGGCCTATTGGG 58.914 47.826 23.59 16.79 38.36 4.12
5688 7706 4.086457 GGGTTACATAATGGGCCTATTGG 58.914 47.826 23.59 17.12 0.00 3.16
5689 7707 4.998051 AGGGTTACATAATGGGCCTATTG 58.002 43.478 23.59 11.68 0.00 1.90
5690 7708 5.281037 GCTAGGGTTACATAATGGGCCTATT 60.281 44.000 19.21 19.21 0.00 1.73
5691 7709 4.227527 GCTAGGGTTACATAATGGGCCTAT 59.772 45.833 4.53 0.00 0.00 2.57
5692 7710 3.585732 GCTAGGGTTACATAATGGGCCTA 59.414 47.826 4.53 0.00 0.00 3.93
5693 7711 2.375509 GCTAGGGTTACATAATGGGCCT 59.624 50.000 4.53 0.00 0.00 5.19
5694 7712 2.375509 AGCTAGGGTTACATAATGGGCC 59.624 50.000 0.00 0.00 0.00 5.80
5695 7713 3.790089 AGCTAGGGTTACATAATGGGC 57.210 47.619 0.00 0.00 0.00 5.36
5696 7714 4.104102 TGGAAGCTAGGGTTACATAATGGG 59.896 45.833 0.00 0.00 28.18 4.00
5697 7715 5.304686 TGGAAGCTAGGGTTACATAATGG 57.695 43.478 0.00 0.00 28.18 3.16
5698 7716 7.823745 ATTTGGAAGCTAGGGTTACATAATG 57.176 36.000 0.00 0.00 33.70 1.90
5699 7717 9.930158 TTTATTTGGAAGCTAGGGTTACATAAT 57.070 29.630 0.00 2.73 33.70 1.28
5700 7718 9.756571 TTTTATTTGGAAGCTAGGGTTACATAA 57.243 29.630 0.00 0.00 33.70 1.90
5701 7719 9.930158 ATTTTATTTGGAAGCTAGGGTTACATA 57.070 29.630 0.00 0.00 33.70 2.29
5702 7720 8.838649 ATTTTATTTGGAAGCTAGGGTTACAT 57.161 30.769 0.00 0.00 33.70 2.29
5703 7721 7.340999 GGATTTTATTTGGAAGCTAGGGTTACA 59.659 37.037 0.00 0.00 31.59 2.41
5704 7722 7.340999 TGGATTTTATTTGGAAGCTAGGGTTAC 59.659 37.037 0.00 0.00 0.00 2.50
5705 7723 7.415086 TGGATTTTATTTGGAAGCTAGGGTTA 58.585 34.615 0.00 0.00 0.00 2.85
5706 7724 6.260663 TGGATTTTATTTGGAAGCTAGGGTT 58.739 36.000 0.00 0.00 0.00 4.11
5707 7725 5.837829 TGGATTTTATTTGGAAGCTAGGGT 58.162 37.500 0.00 0.00 0.00 4.34
5708 7726 6.790232 TTGGATTTTATTTGGAAGCTAGGG 57.210 37.500 0.00 0.00 0.00 3.53
5709 7727 7.041721 GGTTTGGATTTTATTTGGAAGCTAGG 58.958 38.462 0.00 0.00 0.00 3.02
5710 7728 6.751888 CGGTTTGGATTTTATTTGGAAGCTAG 59.248 38.462 0.00 0.00 0.00 3.42
5711 7729 6.209788 ACGGTTTGGATTTTATTTGGAAGCTA 59.790 34.615 0.00 0.00 0.00 3.32
5712 7730 5.011635 ACGGTTTGGATTTTATTTGGAAGCT 59.988 36.000 0.00 0.00 0.00 3.74
5713 7731 5.234752 ACGGTTTGGATTTTATTTGGAAGC 58.765 37.500 0.00 0.00 0.00 3.86
5714 7732 5.867174 GGACGGTTTGGATTTTATTTGGAAG 59.133 40.000 0.00 0.00 0.00 3.46
5715 7733 5.304614 TGGACGGTTTGGATTTTATTTGGAA 59.695 36.000 0.00 0.00 0.00 3.53
5716 7734 4.833380 TGGACGGTTTGGATTTTATTTGGA 59.167 37.500 0.00 0.00 0.00 3.53
5717 7735 5.140747 TGGACGGTTTGGATTTTATTTGG 57.859 39.130 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.