Multiple sequence alignment - TraesCS4B01G154500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G154500 chr4B 100.000 7244 0 0 1 7244 273624134 273616891 0.000000e+00 13378.0
1 TraesCS4B01G154500 chr4B 74.749 895 202 17 4473 5361 276962610 276963486 5.300000e-101 379.0
2 TraesCS4B01G154500 chr4B 99.145 117 1 0 4169 4285 530968708 530968824 2.050000e-50 211.0
3 TraesCS4B01G154500 chr4B 94.845 97 3 2 1695 1790 192792835 192792740 4.530000e-32 150.0
4 TraesCS4B01G154500 chr4B 100.000 47 0 0 6500 6546 186741773 186741727 3.600000e-13 87.9
5 TraesCS4B01G154500 chr4B 100.000 47 0 0 6502 6548 237272720 237272766 3.600000e-13 87.9
6 TraesCS4B01G154500 chr4B 89.286 56 6 0 6588 6643 300934581 300934636 3.630000e-08 71.3
7 TraesCS4B01G154500 chr4B 90.566 53 4 1 6598 6650 579901324 579901375 1.300000e-07 69.4
8 TraesCS4B01G154500 chr4D 95.622 3061 83 23 534 3588 274459292 274462307 0.000000e+00 4863.0
9 TraesCS4B01G154500 chr4D 98.036 2037 40 0 4287 6323 274465070 274467106 0.000000e+00 3541.0
10 TraesCS4B01G154500 chr4D 94.828 348 16 1 3587 3932 274464566 274464913 6.390000e-150 542.0
11 TraesCS4B01G154500 chr4D 75.700 786 169 15 4473 5253 286394633 286393865 2.470000e-99 374.0
12 TraesCS4B01G154500 chr4D 91.129 248 15 5 6610 6854 274467799 274468042 5.420000e-86 329.0
13 TraesCS4B01G154500 chr4D 98.765 162 2 0 4013 4174 274464911 274465072 9.200000e-74 289.0
14 TraesCS4B01G154500 chr4D 90.090 222 9 6 6326 6547 274467302 274467510 7.160000e-70 276.0
15 TraesCS4B01G154500 chr4D 97.479 119 3 0 4171 4289 72256246 72256128 3.430000e-48 204.0
16 TraesCS4B01G154500 chr4D 97.959 49 0 1 6499 6547 5527908 5527955 4.660000e-12 84.2
17 TraesCS4B01G154500 chr4D 96.078 51 2 0 6497 6547 387812503 387812453 4.660000e-12 84.2
18 TraesCS4B01G154500 chr4D 97.872 47 1 0 6502 6548 215459549 215459595 1.670000e-11 82.4
19 TraesCS4B01G154500 chr4D 97.917 48 0 1 6500 6547 372358078 372358032 1.670000e-11 82.4
20 TraesCS4B01G154500 chr4D 100.000 43 0 0 6505 6547 13198281 13198323 6.020000e-11 80.5
21 TraesCS4B01G154500 chr4D 95.833 48 2 0 6500 6547 490940038 490940085 2.170000e-10 78.7
22 TraesCS4B01G154500 chr4D 97.297 37 1 0 6549 6585 355357658 355357622 6.070000e-06 63.9
23 TraesCS4B01G154500 chr4D 96.875 32 1 0 6598 6629 333269825 333269856 4.000000e-03 54.7
24 TraesCS4B01G154500 chr4A 97.426 2137 38 10 4287 6419 208822924 208825047 0.000000e+00 3626.0
25 TraesCS4B01G154500 chr4A 95.933 2164 71 6 1781 3932 208820609 208822767 0.000000e+00 3493.0
26 TraesCS4B01G154500 chr4A 92.571 1050 28 14 551 1571 208815053 208816081 0.000000e+00 1461.0
27 TraesCS4B01G154500 chr4A 75.669 785 171 13 4473 5253 207979887 207979119 2.470000e-99 374.0
28 TraesCS4B01G154500 chr4A 98.148 162 3 0 4013 4174 208822765 208822926 4.280000e-72 283.0
29 TraesCS4B01G154500 chr4A 91.371 197 12 4 6659 6854 208827386 208827578 1.550000e-66 265.0
30 TraesCS4B01G154500 chr4A 94.697 132 4 3 1568 1699 208820483 208820611 1.230000e-47 202.0
31 TraesCS4B01G154500 chr4A 95.000 100 4 1 3931 4030 43612762 43612664 9.730000e-34 156.0
32 TraesCS4B01G154500 chr4A 95.556 90 3 1 1694 1783 511040482 511040570 7.580000e-30 143.0
33 TraesCS4B01G154500 chr4A 80.714 140 14 8 6506 6643 38814273 38814145 5.980000e-16 97.1
34 TraesCS4B01G154500 chr4A 88.732 71 6 2 6851 6920 535437529 535437598 1.290000e-12 86.1
35 TraesCS4B01G154500 chr4A 87.879 66 6 2 6493 6556 618855824 618855889 7.790000e-10 76.8
36 TraesCS4B01G154500 chr4A 88.710 62 6 1 6589 6650 597826986 597827046 2.800000e-09 75.0
37 TraesCS4B01G154500 chr7B 83.733 1168 186 4 4418 5583 599425205 599424040 0.000000e+00 1101.0
38 TraesCS4B01G154500 chr7B 93.506 77 3 2 6857 6932 617585440 617585365 5.940000e-21 113.0
39 TraesCS4B01G154500 chr7B 89.189 74 6 2 6849 6920 106286183 106286110 2.780000e-14 91.6
40 TraesCS4B01G154500 chr7B 92.593 54 4 0 6588 6641 594962695 594962642 2.170000e-10 78.7
41 TraesCS4B01G154500 chr7B 94.737 38 2 0 6548 6585 379768465 379768428 7.850000e-05 60.2
42 TraesCS4B01G154500 chr7D 83.048 1168 191 6 4418 5583 553222090 553220928 0.000000e+00 1053.0
43 TraesCS4B01G154500 chr7D 74.760 416 95 10 4473 4886 533986760 533987167 2.080000e-40 178.0
44 TraesCS4B01G154500 chr7D 94.792 96 3 2 1696 1791 540570510 540570417 1.630000e-31 148.0
45 TraesCS4B01G154500 chr7D 93.220 59 3 1 6592 6650 390929791 390929734 1.290000e-12 86.1
46 TraesCS4B01G154500 chr7D 100.000 45 0 0 6503 6547 135026325 135026281 4.660000e-12 84.2
47 TraesCS4B01G154500 chr7D 97.872 47 1 0 6501 6547 126648467 126648513 1.670000e-11 82.4
48 TraesCS4B01G154500 chr7D 85.135 74 6 5 6850 6921 452742488 452742418 3.630000e-08 71.3
49 TraesCS4B01G154500 chr7D 97.297 37 1 0 6549 6585 423011161 423011197 6.070000e-06 63.9
50 TraesCS4B01G154500 chr7A 82.991 1170 191 7 4418 5583 638867211 638866046 0.000000e+00 1051.0
51 TraesCS4B01G154500 chr7A 89.531 554 50 4 1 547 245308059 245307507 0.000000e+00 695.0
52 TraesCS4B01G154500 chr7A 88.989 554 53 3 1 547 245224144 245223592 0.000000e+00 678.0
53 TraesCS4B01G154500 chr7A 87.637 364 43 2 182 544 577483484 577483846 8.690000e-114 422.0
54 TraesCS4B01G154500 chr7A 87.662 154 8 3 43 185 577478219 577478372 1.250000e-37 169.0
55 TraesCS4B01G154500 chr7A 74.696 411 89 10 4474 4879 614592243 614592643 1.250000e-37 169.0
56 TraesCS4B01G154500 chr7A 92.593 108 5 3 3931 4037 449734146 449734041 1.260000e-32 152.0
57 TraesCS4B01G154500 chr3D 89.818 550 51 3 1 547 564281472 564280925 0.000000e+00 701.0
58 TraesCS4B01G154500 chr3D 93.846 65 3 1 6856 6920 164062580 164062643 5.980000e-16 97.1
59 TraesCS4B01G154500 chr3D 96.429 56 2 0 6492 6547 197994376 197994431 7.740000e-15 93.5
60 TraesCS4B01G154500 chr3D 98.000 50 1 0 6498 6547 360046453 360046502 3.600000e-13 87.9
61 TraesCS4B01G154500 chr3D 96.226 53 1 1 6598 6650 175538852 175538903 1.290000e-12 86.1
62 TraesCS4B01G154500 chr3D 88.710 62 6 1 6853 6914 97914968 97914908 2.800000e-09 75.0
63 TraesCS4B01G154500 chr3D 90.566 53 3 2 6598 6650 277538554 277538604 1.300000e-07 69.4
64 TraesCS4B01G154500 chr3D 89.362 47 5 0 6549 6595 71245791 71245837 7.850000e-05 60.2
65 TraesCS4B01G154500 chr2A 89.834 541 51 2 1 538 433549454 433549993 0.000000e+00 691.0
66 TraesCS4B01G154500 chr2A 97.938 97 1 1 3929 4025 712843536 712843631 4.500000e-37 167.0
67 TraesCS4B01G154500 chr2A 90.909 66 0 5 6488 6547 68155944 68155879 4.660000e-12 84.2
68 TraesCS4B01G154500 chr2A 89.831 59 5 1 499 556 769158577 769158519 2.800000e-09 75.0
69 TraesCS4B01G154500 chr3A 87.645 518 47 7 43 548 575769970 575770482 2.910000e-163 586.0
70 TraesCS4B01G154500 chr3A 98.039 51 1 0 6497 6547 314623890 314623940 1.000000e-13 89.8
71 TraesCS4B01G154500 chr3B 92.537 201 15 0 6931 7131 77157560 77157360 9.200000e-74 289.0
72 TraesCS4B01G154500 chr3B 92.647 136 7 2 4163 4298 231187149 231187017 7.420000e-45 193.0
73 TraesCS4B01G154500 chr3B 92.086 139 7 4 4148 4285 828461649 828461784 7.420000e-45 193.0
74 TraesCS4B01G154500 chr6D 83.946 299 48 0 91 389 457066007 457065709 3.310000e-73 287.0
75 TraesCS4B01G154500 chr6D 95.238 126 6 0 4160 4285 87087840 87087965 4.430000e-47 200.0
76 TraesCS4B01G154500 chr6D 100.000 46 0 0 6502 6547 457543836 457543791 1.290000e-12 86.1
77 TraesCS4B01G154500 chr6D 97.872 47 0 1 6502 6548 59626112 59626157 6.020000e-11 80.5
78 TraesCS4B01G154500 chr6D 97.826 46 1 0 6502 6547 217918764 217918809 6.020000e-11 80.5
79 TraesCS4B01G154500 chr6D 100.000 42 0 0 6506 6547 16366268 16366309 2.170000e-10 78.7
80 TraesCS4B01G154500 chr6D 100.000 42 0 0 6506 6547 18672085 18672126 2.170000e-10 78.7
81 TraesCS4B01G154500 chr6D 100.000 42 0 0 6506 6547 25888980 25889021 2.170000e-10 78.7
82 TraesCS4B01G154500 chr6D 97.778 45 1 0 6503 6547 199867891 199867847 2.170000e-10 78.7
83 TraesCS4B01G154500 chr6D 95.833 48 2 0 6500 6547 291383347 291383394 2.170000e-10 78.7
84 TraesCS4B01G154500 chr6D 100.000 42 0 0 6506 6547 319691572 319691613 2.170000e-10 78.7
85 TraesCS4B01G154500 chr6D 95.918 49 1 1 6500 6547 374820310 374820262 2.170000e-10 78.7
86 TraesCS4B01G154500 chr6D 97.778 45 0 1 6502 6546 91559633 91559590 7.790000e-10 76.8
87 TraesCS4B01G154500 chr6D 95.745 47 2 0 6500 6546 362051420 362051466 7.790000e-10 76.8
88 TraesCS4B01G154500 chr6D 92.453 53 3 1 6496 6547 68866254 68866202 2.800000e-09 75.0
89 TraesCS4B01G154500 chr6D 93.878 49 2 1 6503 6550 808305 808257 1.010000e-08 73.1
90 TraesCS4B01G154500 chr6D 84.722 72 5 4 6855 6924 79997496 79997429 4.690000e-07 67.6
91 TraesCS4B01G154500 chr6D 85.294 68 4 5 6855 6920 112906598 112906535 1.690000e-06 65.8
92 TraesCS4B01G154500 chr6D 97.297 37 1 0 6549 6585 164539502 164539538 6.070000e-06 63.9
93 TraesCS4B01G154500 chr6D 97.297 37 1 0 6549 6585 452258373 452258337 6.070000e-06 63.9
94 TraesCS4B01G154500 chr6D 94.737 38 2 0 6548 6585 83443313 83443276 7.850000e-05 60.2
95 TraesCS4B01G154500 chr6D 94.595 37 2 0 6549 6585 204060176 204060140 2.820000e-04 58.4
96 TraesCS4B01G154500 chr6D 94.595 37 2 0 6549 6585 204185935 204185899 2.820000e-04 58.4
97 TraesCS4B01G154500 chr6D 94.595 37 2 0 6549 6585 234658447 234658411 2.820000e-04 58.4
98 TraesCS4B01G154500 chr6D 94.595 37 2 0 6549 6585 273377754 273377790 2.820000e-04 58.4
99 TraesCS4B01G154500 chr6D 94.595 37 2 0 6549 6585 285312291 285312327 2.820000e-04 58.4
100 TraesCS4B01G154500 chr6D 94.595 37 2 0 6549 6585 452257871 452257835 2.820000e-04 58.4
101 TraesCS4B01G154500 chr5D 96.721 122 3 1 4165 4285 565900782 565900903 1.230000e-47 202.0
102 TraesCS4B01G154500 chr5D 97.872 47 1 0 6502 6548 416422266 416422312 1.670000e-11 82.4
103 TraesCS4B01G154500 chr5D 94.340 53 2 1 6855 6907 335859101 335859050 6.020000e-11 80.5
104 TraesCS4B01G154500 chr5D 94.118 51 3 0 6500 6550 119492176 119492126 2.170000e-10 78.7
105 TraesCS4B01G154500 chr5D 97.826 46 0 1 6502 6547 346885181 346885137 2.170000e-10 78.7
106 TraesCS4B01G154500 chr5D 95.455 44 2 0 6855 6898 231779968 231779925 3.630000e-08 71.3
107 TraesCS4B01G154500 chr5D 83.562 73 6 5 6855 6924 44631789 44631720 6.070000e-06 63.9
108 TraesCS4B01G154500 chr5D 94.872 39 2 0 6860 6898 233720918 233720880 2.180000e-05 62.1
109 TraesCS4B01G154500 chr2B 94.615 130 6 1 4161 4290 723434358 723434230 4.430000e-47 200.0
110 TraesCS4B01G154500 chr2B 97.391 115 3 0 4171 4285 190059223 190059337 5.730000e-46 196.0
111 TraesCS4B01G154500 chr2B 95.050 101 4 1 3918 4018 201234252 201234351 2.710000e-34 158.0
112 TraesCS4B01G154500 chr2B 91.803 61 5 0 6582 6642 2853836 2853776 1.290000e-12 86.1
113 TraesCS4B01G154500 chr2B 94.444 54 3 0 6495 6548 600792517 600792570 4.660000e-12 84.2
114 TraesCS4B01G154500 chr1B 95.276 127 5 1 4160 4285 613246057 613245931 4.430000e-47 200.0
115 TraesCS4B01G154500 chr1B 90.678 118 9 1 3930 4047 234252589 234252704 9.730000e-34 156.0
116 TraesCS4B01G154500 chr1B 94.792 96 2 3 1694 1787 406341757 406341851 5.860000e-31 147.0
117 TraesCS4B01G154500 chr1B 94.643 56 0 3 6493 6546 259511827 259511881 4.660000e-12 84.2
118 TraesCS4B01G154500 chr1B 94.340 53 3 0 6495 6547 664054119 664054171 1.670000e-11 82.4
119 TraesCS4B01G154500 chr1B 85.507 69 6 4 6855 6921 349354593 349354659 1.300000e-07 69.4
120 TraesCS4B01G154500 chr1D 96.000 100 2 2 3918 4016 85191610 85191512 2.090000e-35 161.0
121 TraesCS4B01G154500 chr1D 81.218 197 33 2 6933 7127 20746003 20745809 9.730000e-34 156.0
122 TraesCS4B01G154500 chr1D 81.026 195 37 0 6933 7127 20770733 20770539 9.730000e-34 156.0
123 TraesCS4B01G154500 chr1D 80.513 195 38 0 6933 7127 20758643 20758449 4.530000e-32 150.0
124 TraesCS4B01G154500 chr1D 94.792 96 3 2 1696 1791 469153915 469154008 1.630000e-31 148.0
125 TraesCS4B01G154500 chr1D 80.000 195 39 0 6933 7127 20778167 20777973 2.110000e-30 145.0
126 TraesCS4B01G154500 chr1D 97.959 49 0 1 6500 6547 410503451 410503403 4.660000e-12 84.2
127 TraesCS4B01G154500 chr1D 96.078 51 1 1 6500 6549 365543320 365543370 1.670000e-11 82.4
128 TraesCS4B01G154500 chr1D 95.652 46 2 0 504 549 30321582 30321627 2.800000e-09 75.0
129 TraesCS4B01G154500 chr1D 97.297 37 1 0 6549 6585 77508549 77508513 6.070000e-06 63.9
130 TraesCS4B01G154500 chr1D 89.583 48 5 0 6538 6585 494933174 494933127 2.180000e-05 62.1
131 TraesCS4B01G154500 chr1D 85.000 60 4 4 6852 6911 64426195 64426249 1.000000e-03 56.5
132 TraesCS4B01G154500 chrUn 96.809 94 3 0 3928 4021 244923899 244923806 2.710000e-34 158.0
133 TraesCS4B01G154500 chrUn 96.809 94 3 0 3928 4021 287095787 287095694 2.710000e-34 158.0
134 TraesCS4B01G154500 chrUn 97.727 44 1 0 6600 6643 30023981 30023938 7.790000e-10 76.8
135 TraesCS4B01G154500 chr6B 95.918 98 3 1 3926 4023 573350073 573349977 2.710000e-34 158.0
136 TraesCS4B01G154500 chr6B 91.525 59 4 1 6587 6644 657091771 657091713 6.020000e-11 80.5
137 TraesCS4B01G154500 chr6B 95.652 46 2 0 6598 6643 617343768 617343813 2.800000e-09 75.0
138 TraesCS4B01G154500 chr6B 85.714 70 7 3 6856 6924 114268166 114268099 3.630000e-08 71.3
139 TraesCS4B01G154500 chr5A 94.737 95 4 1 1689 1783 526875307 526875400 5.860000e-31 147.0
140 TraesCS4B01G154500 chr5A 92.233 103 6 2 1689 1791 533835098 533835198 2.110000e-30 145.0
141 TraesCS4B01G154500 chr5A 89.873 79 6 2 6855 6932 69195610 69195687 4.620000e-17 100.0
142 TraesCS4B01G154500 chr5A 96.154 52 1 1 6498 6548 700362924 700362873 4.660000e-12 84.2
143 TraesCS4B01G154500 chr5A 89.394 66 6 1 6856 6920 44130141 44130206 1.670000e-11 82.4
144 TraesCS4B01G154500 chr5A 97.826 46 1 0 6598 6643 443694742 443694697 6.020000e-11 80.5
145 TraesCS4B01G154500 chr6A 92.857 98 6 1 1697 1794 601226107 601226011 2.720000e-29 141.0
146 TraesCS4B01G154500 chr6A 89.655 58 5 1 6587 6643 395249177 395249120 1.010000e-08 73.1
147 TraesCS4B01G154500 chr5B 87.654 81 8 2 6849 6928 95144412 95144491 7.740000e-15 93.5
148 TraesCS4B01G154500 chr5B 86.905 84 5 6 6845 6927 400469803 400469725 1.000000e-13 89.8
149 TraesCS4B01G154500 chr5B 91.525 59 1 3 489 547 676175088 676175034 2.170000e-10 78.7
150 TraesCS4B01G154500 chr2D 97.959 49 1 0 6499 6547 451974322 451974370 1.290000e-12 86.1
151 TraesCS4B01G154500 chr2D 96.078 51 1 1 6497 6547 124806553 124806602 1.670000e-11 82.4
152 TraesCS4B01G154500 chr2D 89.231 65 6 1 6857 6920 378946424 378946360 6.020000e-11 80.5
153 TraesCS4B01G154500 chr2D 89.231 65 3 3 6834 6898 311822467 311822407 2.170000e-10 78.7
154 TraesCS4B01G154500 chr2D 95.652 46 1 1 6604 6648 564297010 564297055 1.010000e-08 73.1
155 TraesCS4B01G154500 chr2D 91.304 46 4 0 6540 6585 54384121 54384166 6.070000e-06 63.9
156 TraesCS4B01G154500 chr2D 97.297 37 1 0 6549 6585 169343214 169343178 6.070000e-06 63.9
157 TraesCS4B01G154500 chr2D 100.000 28 0 0 6582 6609 154185005 154184978 1.300000e-02 52.8
158 TraesCS4B01G154500 chr1A 97.959 49 0 1 6500 6547 506548691 506548643 4.660000e-12 84.2
159 TraesCS4B01G154500 chr1A 91.379 58 3 2 6490 6546 21621986 21622042 2.170000e-10 78.7
160 TraesCS4B01G154500 chr1A 86.765 68 6 3 6483 6547 74014395 74014462 1.010000e-08 73.1
161 TraesCS4B01G154500 chr1A 90.385 52 3 2 6855 6906 230654696 230654647 4.690000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G154500 chr4B 273616891 273624134 7243 True 13378.0 13378 100.000 1 7244 1 chr4B.!!$R3 7243
1 TraesCS4B01G154500 chr4B 276962610 276963486 876 False 379.0 379 74.749 4473 5361 1 chr4B.!!$F2 888
2 TraesCS4B01G154500 chr4D 274459292 274468042 8750 False 1640.0 4863 94.745 534 6854 6 chr4D.!!$F6 6320
3 TraesCS4B01G154500 chr4D 286393865 286394633 768 True 374.0 374 75.700 4473 5253 1 chr4D.!!$R2 780
4 TraesCS4B01G154500 chr4A 208820483 208827578 7095 False 1573.8 3626 95.515 1568 6854 5 chr4A.!!$F6 5286
5 TraesCS4B01G154500 chr4A 208815053 208816081 1028 False 1461.0 1461 92.571 551 1571 1 chr4A.!!$F1 1020
6 TraesCS4B01G154500 chr4A 207979119 207979887 768 True 374.0 374 75.669 4473 5253 1 chr4A.!!$R3 780
7 TraesCS4B01G154500 chr7B 599424040 599425205 1165 True 1101.0 1101 83.733 4418 5583 1 chr7B.!!$R4 1165
8 TraesCS4B01G154500 chr7D 553220928 553222090 1162 True 1053.0 1053 83.048 4418 5583 1 chr7D.!!$R5 1165
9 TraesCS4B01G154500 chr7A 638866046 638867211 1165 True 1051.0 1051 82.991 4418 5583 1 chr7A.!!$R4 1165
10 TraesCS4B01G154500 chr7A 245307507 245308059 552 True 695.0 695 89.531 1 547 1 chr7A.!!$R2 546
11 TraesCS4B01G154500 chr7A 245223592 245224144 552 True 678.0 678 88.989 1 547 1 chr7A.!!$R1 546
12 TraesCS4B01G154500 chr3D 564280925 564281472 547 True 701.0 701 89.818 1 547 1 chr3D.!!$R2 546
13 TraesCS4B01G154500 chr2A 433549454 433549993 539 False 691.0 691 89.834 1 538 1 chr2A.!!$F1 537
14 TraesCS4B01G154500 chr3A 575769970 575770482 512 False 586.0 586 87.645 43 548 1 chr3A.!!$F2 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
544 557 1.573829 CGCACGGGCTCTTTTGCTAA 61.574 55.000 8.62 0.00 38.10 3.09 F
1808 1859 0.246635 AATTCGCTCGCACACTAGGT 59.753 50.000 0.00 0.00 0.00 3.08 F
2215 2266 2.649816 AGAAGTACCCAGGCCTCAAAAT 59.350 45.455 0.00 0.00 0.00 1.82 F
3527 3578 0.738389 ACGGTTTGTGCAAAGTCCAG 59.262 50.000 0.00 0.00 0.00 3.86 F
4189 6501 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17 F
4283 6595 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
4284 6596 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2113 2164 1.134098 AGAACACCACACTCAACAGGG 60.134 52.381 0.00 0.00 0.00 4.45 R
2694 2745 1.002430 TCTGAAGAATGCTGCCTTCGT 59.998 47.619 11.18 8.63 41.10 3.85 R
4173 6485 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
5483 7798 0.536006 AAAGCTGTGCTGACTGGTCC 60.536 55.000 0.00 0.00 39.62 4.46 R
5855 8170 1.133598 CGACACATACCCTCGTGCTTA 59.866 52.381 0.00 0.00 36.57 3.09 R
6096 8411 1.691163 CCAGGGTTTTTGGGTTCACCT 60.691 52.381 0.00 0.00 41.11 4.00 R
6396 8907 0.321653 CTACTCCACCAGTTGGCCAC 60.322 60.000 3.88 0.00 46.47 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.166173 TGTTGAGTTCAGACCTTCATAAATATG 57.834 33.333 0.00 0.00 35.04 1.78
77 78 4.929819 ATCATGCTAATTGCTGCATCAA 57.070 36.364 5.30 5.30 46.65 2.57
84 85 4.628333 GCTAATTGCTGCATCAACATGTTT 59.372 37.500 8.77 0.00 38.95 2.83
93 94 6.400303 GCTGCATCAACATGTTTTGTGTTATC 60.400 38.462 8.77 0.00 38.99 1.75
99 100 7.653647 TCAACATGTTTTGTGTTATCTTACCC 58.346 34.615 8.77 0.00 38.99 3.69
205 217 3.644823 TGTATCATAACGGCCATACACG 58.355 45.455 2.24 0.00 28.80 4.49
222 234 6.881065 CCATACACGATTCCATCATTAATCCT 59.119 38.462 0.00 0.00 0.00 3.24
304 317 7.259290 ACCACTGAAACAACTGTAAATGTAG 57.741 36.000 0.00 0.00 0.00 2.74
313 326 9.646427 AAACAACTGTAAATGTAGCAAAAGAAA 57.354 25.926 0.00 0.00 0.00 2.52
377 390 7.867445 AAACATACATTTTCACATCGGAAAC 57.133 32.000 0.00 0.00 36.56 2.78
385 398 3.536956 TCACATCGGAAACCATCCTAC 57.463 47.619 0.00 0.00 46.98 3.18
389 402 5.188163 TCACATCGGAAACCATCCTACTAAA 59.812 40.000 0.00 0.00 46.98 1.85
401 414 9.900112 AACCATCCTACTAAATATTAGTCTCCT 57.100 33.333 6.07 0.00 0.00 3.69
424 437 6.599244 CCTTTCAAAGACATAGGTCATAGCAA 59.401 38.462 10.58 0.00 46.80 3.91
435 448 3.584848 AGGTCATAGCAACACTTCTCCTT 59.415 43.478 0.00 0.00 0.00 3.36
439 452 5.121454 GTCATAGCAACACTTCTCCTTCAAG 59.879 44.000 0.00 0.00 0.00 3.02
442 455 4.070716 AGCAACACTTCTCCTTCAAGATG 58.929 43.478 0.00 0.00 0.00 2.90
447 460 5.486526 ACACTTCTCCTTCAAGATGTGATC 58.513 41.667 20.24 0.00 46.53 2.92
451 464 2.864946 CTCCTTCAAGATGTGATCTGCG 59.135 50.000 0.00 0.00 40.13 5.18
464 477 4.934602 TGTGATCTGCGTAAACATGATCAA 59.065 37.500 0.00 0.00 43.07 2.57
471 484 7.537715 TCTGCGTAAACATGATCAATTGATTT 58.462 30.769 21.57 14.32 34.37 2.17
472 485 7.697710 TCTGCGTAAACATGATCAATTGATTTC 59.302 33.333 21.57 11.77 34.37 2.17
486 499 8.792830 TCAATTGATTTCCTACTTCACCTTAG 57.207 34.615 3.38 0.00 0.00 2.18
544 557 1.573829 CGCACGGGCTCTTTTGCTAA 61.574 55.000 8.62 0.00 38.10 3.09
548 561 3.119637 GCACGGGCTCTTTTGCTAATAAA 60.120 43.478 0.00 0.00 36.96 1.40
549 562 4.662145 CACGGGCTCTTTTGCTAATAAAG 58.338 43.478 0.00 0.00 34.63 1.85
550 563 4.156008 CACGGGCTCTTTTGCTAATAAAGT 59.844 41.667 0.00 0.00 34.86 2.66
551 564 4.765339 ACGGGCTCTTTTGCTAATAAAGTT 59.235 37.500 0.00 0.00 34.86 2.66
552 565 5.243060 ACGGGCTCTTTTGCTAATAAAGTTT 59.757 36.000 0.00 0.00 34.86 2.66
553 566 6.156519 CGGGCTCTTTTGCTAATAAAGTTTT 58.843 36.000 0.00 0.00 34.86 2.43
554 567 7.040271 ACGGGCTCTTTTGCTAATAAAGTTTTA 60.040 33.333 0.00 0.00 34.86 1.52
555 568 7.973944 CGGGCTCTTTTGCTAATAAAGTTTTAT 59.026 33.333 0.00 0.00 34.86 1.40
697 711 6.292596 CCGTTCTCTTCTTTCTTTCTCTTGTG 60.293 42.308 0.00 0.00 0.00 3.33
724 743 2.552585 TTAAAGCCCGACTCGCCTCG 62.553 60.000 0.00 0.00 0.00 4.63
758 777 2.124693 CCGTCTCTGCCTCCTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
759 778 2.477176 CGTCTCTGCCTCCTCTCCG 61.477 68.421 0.00 0.00 0.00 4.63
815 834 3.052909 TACTCTACTCCCGGCGGCT 62.053 63.158 23.20 7.37 0.00 5.52
1077 1116 0.317160 CCGCTTAGGATGATGCCGTA 59.683 55.000 0.00 0.00 45.00 4.02
1272 1311 4.113815 CTGCTCCATGCCGGGGAA 62.114 66.667 2.18 0.00 37.51 3.97
1550 1597 3.877508 GTGCTACTTGATATTGGGTGGTC 59.122 47.826 0.00 0.00 0.00 4.02
1666 1717 4.637091 GCATTGCCTTTATTTGCTTCCAAT 59.363 37.500 0.00 0.00 0.00 3.16
1682 1733 5.523438 TTCCAATTTGGTGTTTACACTCC 57.477 39.130 14.98 0.00 45.73 3.85
1683 1734 4.798882 TCCAATTTGGTGTTTACACTCCT 58.201 39.130 14.98 0.00 45.73 3.69
1706 1757 3.806949 TTTTTGCCATGTACTCCCTCT 57.193 42.857 0.00 0.00 0.00 3.69
1712 1763 3.197766 TGCCATGTACTCCCTCTGTAAAG 59.802 47.826 0.00 0.00 0.00 1.85
1714 1765 4.081087 GCCATGTACTCCCTCTGTAAAGAA 60.081 45.833 0.00 0.00 0.00 2.52
1715 1766 5.570844 GCCATGTACTCCCTCTGTAAAGAAA 60.571 44.000 0.00 0.00 0.00 2.52
1716 1767 6.472887 CCATGTACTCCCTCTGTAAAGAAAA 58.527 40.000 0.00 0.00 0.00 2.29
1717 1768 7.112779 CCATGTACTCCCTCTGTAAAGAAAAT 58.887 38.462 0.00 0.00 0.00 1.82
1718 1769 8.265055 CCATGTACTCCCTCTGTAAAGAAAATA 58.735 37.037 0.00 0.00 0.00 1.40
1719 1770 9.838339 CATGTACTCCCTCTGTAAAGAAAATAT 57.162 33.333 0.00 0.00 0.00 1.28
1727 1778 9.892130 CCCTCTGTAAAGAAAATATAAGAGTGT 57.108 33.333 0.00 0.00 0.00 3.55
1808 1859 0.246635 AATTCGCTCGCACACTAGGT 59.753 50.000 0.00 0.00 0.00 3.08
1829 1880 5.420739 AGGTTTTGTTGACTTTTGGAGCTTA 59.579 36.000 0.00 0.00 0.00 3.09
2019 2070 5.418840 GTGGATTTGATGAATGTGGGTTACT 59.581 40.000 0.00 0.00 0.00 2.24
2094 2145 7.796054 AGTTGCTCATCCTGTATGTAGTAAAT 58.204 34.615 0.00 0.00 36.89 1.40
2215 2266 2.649816 AGAAGTACCCAGGCCTCAAAAT 59.350 45.455 0.00 0.00 0.00 1.82
2284 2335 6.611613 AGTCCTGAATGAGATCTGTTAACA 57.388 37.500 8.28 8.28 0.00 2.41
2769 2820 6.617371 AGGATAGTCAGGTGACCTCAATTTAT 59.383 38.462 0.00 0.00 45.85 1.40
2830 2881 3.446161 CCAGGATCAACATTCAATGCTGT 59.554 43.478 0.00 0.00 37.21 4.40
2907 2958 4.440802 CCATTCTCTACTCAAGAAGGTCCG 60.441 50.000 0.00 0.00 36.27 4.79
2924 2975 4.081406 GGTCCGGGTTTTACCAATAAGTT 58.919 43.478 0.00 0.00 41.02 2.66
2934 2985 7.266400 GTTTTACCAATAAGTTGTTGACCCAA 58.734 34.615 13.40 0.00 33.36 4.12
2967 3018 1.745653 GAGCAATTTACTCCACTGCCC 59.254 52.381 0.00 0.00 33.41 5.36
2993 3044 1.576421 CCAGTTCGCTTTGGAGTGC 59.424 57.895 0.00 0.00 36.55 4.40
3051 3102 4.434713 TTTCGGCAAAAATCTAAGCCTC 57.565 40.909 0.00 0.00 44.85 4.70
3297 3348 3.287222 ACGTTGCAAATGTAGGCCATAT 58.713 40.909 5.01 0.00 45.92 1.78
3330 3381 9.665719 TTTTGATCTCTTTTGCCTTTAGTTTTT 57.334 25.926 0.00 0.00 0.00 1.94
3331 3382 8.871686 TTGATCTCTTTTGCCTTTAGTTTTTC 57.128 30.769 0.00 0.00 0.00 2.29
3357 3408 3.130516 GCTGGTTAATTAGTGAAAGGGCC 59.869 47.826 0.00 0.00 0.00 5.80
3391 3442 3.851458 TCCCCATGATCAGATGAGTTG 57.149 47.619 0.09 0.00 0.00 3.16
3527 3578 0.738389 ACGGTTTGTGCAAAGTCCAG 59.262 50.000 0.00 0.00 0.00 3.86
3648 5960 0.937304 TGTCGAAGAGTTGTTGCTGC 59.063 50.000 0.00 0.00 36.95 5.25
3806 6118 8.966069 TCTCTTTCGAGATTATCTCTAGTTCA 57.034 34.615 18.61 0.00 41.26 3.18
3839 6151 6.481644 GGTTCCACTTGCATTGTTCAAAATAA 59.518 34.615 0.00 0.00 0.00 1.40
3899 6211 4.018506 TCCAAATCTCCATAGTTCAGGCAA 60.019 41.667 0.00 0.00 0.00 4.52
3929 6241 4.894784 TGTTTAGGGCTCTACTTCACTTG 58.105 43.478 0.00 0.00 0.00 3.16
3930 6242 4.347000 TGTTTAGGGCTCTACTTCACTTGT 59.653 41.667 0.00 0.00 0.00 3.16
3931 6243 5.541101 TGTTTAGGGCTCTACTTCACTTGTA 59.459 40.000 0.00 0.00 0.00 2.41
3932 6244 5.656213 TTAGGGCTCTACTTCACTTGTAC 57.344 43.478 0.00 0.00 0.00 2.90
3933 6245 3.780626 AGGGCTCTACTTCACTTGTACT 58.219 45.455 0.00 0.00 0.00 2.73
3934 6246 3.764972 AGGGCTCTACTTCACTTGTACTC 59.235 47.826 0.00 0.00 0.00 2.59
3935 6247 3.119065 GGGCTCTACTTCACTTGTACTCC 60.119 52.174 0.00 0.00 0.00 3.85
3936 6248 3.119065 GGCTCTACTTCACTTGTACTCCC 60.119 52.174 0.00 0.00 0.00 4.30
3937 6249 3.764972 GCTCTACTTCACTTGTACTCCCT 59.235 47.826 0.00 0.00 0.00 4.20
3938 6250 4.142337 GCTCTACTTCACTTGTACTCCCTC 60.142 50.000 0.00 0.00 0.00 4.30
3939 6251 5.258051 CTCTACTTCACTTGTACTCCCTCT 58.742 45.833 0.00 0.00 0.00 3.69
3940 6252 5.010933 TCTACTTCACTTGTACTCCCTCTG 58.989 45.833 0.00 0.00 0.00 3.35
3941 6253 3.577919 ACTTCACTTGTACTCCCTCTGT 58.422 45.455 0.00 0.00 0.00 3.41
3942 6254 4.737578 ACTTCACTTGTACTCCCTCTGTA 58.262 43.478 0.00 0.00 0.00 2.74
3943 6255 5.145564 ACTTCACTTGTACTCCCTCTGTAA 58.854 41.667 0.00 0.00 0.00 2.41
3944 6256 5.601313 ACTTCACTTGTACTCCCTCTGTAAA 59.399 40.000 0.00 0.00 0.00 2.01
3945 6257 5.464030 TCACTTGTACTCCCTCTGTAAAC 57.536 43.478 0.00 0.00 0.00 2.01
3946 6258 5.145564 TCACTTGTACTCCCTCTGTAAACT 58.854 41.667 0.00 0.00 0.00 2.66
3947 6259 6.309357 TCACTTGTACTCCCTCTGTAAACTA 58.691 40.000 0.00 0.00 0.00 2.24
3948 6260 6.779049 TCACTTGTACTCCCTCTGTAAACTAA 59.221 38.462 0.00 0.00 0.00 2.24
3949 6261 7.453752 TCACTTGTACTCCCTCTGTAAACTAAT 59.546 37.037 0.00 0.00 0.00 1.73
3950 6262 8.746530 CACTTGTACTCCCTCTGTAAACTAATA 58.253 37.037 0.00 0.00 0.00 0.98
3951 6263 9.490083 ACTTGTACTCCCTCTGTAAACTAATAT 57.510 33.333 0.00 0.00 0.00 1.28
3957 6269 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
3959 6271 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
3989 6301 9.733219 GATAACTAAAGTAGTGATCTAAACGCT 57.267 33.333 5.75 0.00 41.55 5.07
3990 6302 9.733219 ATAACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.39 5.03
3991 6303 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
3992 6304 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
3993 6305 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
3994 6306 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
4006 6318 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
4007 6319 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
4008 6320 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
4009 6321 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
4010 6322 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
4011 6323 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
4119 6431 3.147553 TGCAGGTGCTTGGTATTGTTA 57.852 42.857 3.18 0.00 42.66 2.41
4179 6491 8.191534 TCTAGCTTTAATTATGTACTCCCTCC 57.808 38.462 0.00 0.00 0.00 4.30
4180 6492 5.855045 AGCTTTAATTATGTACTCCCTCCG 58.145 41.667 0.00 0.00 0.00 4.63
4181 6493 5.365895 AGCTTTAATTATGTACTCCCTCCGT 59.634 40.000 0.00 0.00 0.00 4.69
4182 6494 5.695363 GCTTTAATTATGTACTCCCTCCGTC 59.305 44.000 0.00 0.00 0.00 4.79
4183 6495 5.796424 TTAATTATGTACTCCCTCCGTCC 57.204 43.478 0.00 0.00 0.00 4.79
4184 6496 1.683943 TTATGTACTCCCTCCGTCCG 58.316 55.000 0.00 0.00 0.00 4.79
4185 6497 0.179009 TATGTACTCCCTCCGTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
4186 6498 1.929860 ATGTACTCCCTCCGTCCGGA 61.930 60.000 0.00 0.00 42.90 5.14
4187 6499 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4188 6500 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4189 6501 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4190 6502 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4191 6503 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4192 6504 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4193 6505 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4194 6506 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4195 6507 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4196 6508 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4197 6509 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4198 6510 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
4199 6511 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
4203 6515 5.341872 TCCGGAAATACTTGTCGGATAAA 57.658 39.130 0.00 0.00 43.84 1.40
4204 6516 5.920903 TCCGGAAATACTTGTCGGATAAAT 58.079 37.500 0.00 0.00 43.84 1.40
4205 6517 5.756347 TCCGGAAATACTTGTCGGATAAATG 59.244 40.000 0.00 0.00 43.84 2.32
4206 6518 5.440685 CGGAAATACTTGTCGGATAAATGC 58.559 41.667 0.00 0.00 0.00 3.56
4207 6519 5.007234 CGGAAATACTTGTCGGATAAATGCA 59.993 40.000 0.00 0.00 0.00 3.96
4208 6520 6.293407 CGGAAATACTTGTCGGATAAATGCAT 60.293 38.462 0.00 0.00 0.00 3.96
4209 6521 7.095397 CGGAAATACTTGTCGGATAAATGCATA 60.095 37.037 0.00 0.00 0.00 3.14
4210 6522 8.564574 GGAAATACTTGTCGGATAAATGCATAA 58.435 33.333 0.00 0.00 0.00 1.90
4211 6523 9.944663 GAAATACTTGTCGGATAAATGCATAAA 57.055 29.630 0.00 0.00 0.00 1.40
4216 6528 8.514594 ACTTGTCGGATAAATGCATAAATATGG 58.485 33.333 0.00 0.00 34.32 2.74
4217 6529 8.628630 TTGTCGGATAAATGCATAAATATGGA 57.371 30.769 0.00 0.00 38.40 3.41
4218 6530 8.806429 TGTCGGATAAATGCATAAATATGGAT 57.194 30.769 0.00 2.00 45.01 3.41
4219 6531 8.676401 TGTCGGATAAATGCATAAATATGGATG 58.324 33.333 0.00 0.00 42.78 3.51
4220 6532 8.677300 GTCGGATAAATGCATAAATATGGATGT 58.323 33.333 0.00 5.68 42.78 3.06
4221 6533 9.898152 TCGGATAAATGCATAAATATGGATGTA 57.102 29.630 0.00 7.53 42.78 2.29
4257 6569 8.423906 AAATACGTCTAGATACATCCATTCCT 57.576 34.615 0.00 0.00 0.00 3.36
4258 6570 5.968528 ACGTCTAGATACATCCATTCCTC 57.031 43.478 0.00 0.00 0.00 3.71
4259 6571 4.767928 ACGTCTAGATACATCCATTCCTCC 59.232 45.833 0.00 0.00 0.00 4.30
4260 6572 4.142578 CGTCTAGATACATCCATTCCTCCG 60.143 50.000 0.00 0.00 0.00 4.63
4261 6573 5.010933 GTCTAGATACATCCATTCCTCCGA 58.989 45.833 0.00 0.00 0.00 4.55
4262 6574 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
4263 6575 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
4264 6576 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
4265 6577 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
4266 6578 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
4267 6579 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
4268 6580 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
4269 6581 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
4270 6582 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
4271 6583 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
4272 6584 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
4273 6585 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
4274 6586 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
4275 6587 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
4276 6588 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
4277 6589 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
4278 6590 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
4279 6591 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
4280 6592 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
4281 6593 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4282 6594 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4283 6595 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4284 6596 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4285 6597 1.397390 TATTTCCGGACGGAGGGAGC 61.397 60.000 13.64 0.00 46.06 4.70
4286 6598 4.689549 TTCCGGACGGAGGGAGCA 62.690 66.667 13.64 0.00 46.06 4.26
5424 7739 5.012148 TGGTCCCAAAACAAAAACTGAAAGA 59.988 36.000 0.00 0.00 37.43 2.52
5483 7798 1.224075 CCCAGCTGTAGCAATGATCG 58.776 55.000 13.81 0.00 45.16 3.69
5848 8163 4.657436 AAACCGGAGACATCACTAGATC 57.343 45.455 9.46 0.00 30.20 2.75
5855 8170 6.376864 CCGGAGACATCACTAGATCATAAGAT 59.623 42.308 0.00 0.00 37.13 2.40
5991 8306 1.003355 TGCTAGCCTGCAACCTGAC 60.003 57.895 13.29 0.00 40.29 3.51
6396 8907 9.715123 TTGTGATTCGTAATATTTACAATGCAG 57.285 29.630 0.00 0.00 0.00 4.41
6426 8937 6.622427 ACTGGTGGAGTAGCTTATTAAGTT 57.378 37.500 0.00 1.92 30.86 2.66
6432 8943 7.041984 GGTGGAGTAGCTTATTAAGTTGTATGC 60.042 40.741 0.00 0.00 0.00 3.14
6485 8996 9.349713 TGGTACTCAATTTATTATGGATTGGAC 57.650 33.333 0.00 0.00 32.91 4.02
6514 9025 8.712103 AGTAGTAACCAATTTATTACTCCCTCC 58.288 37.037 12.37 1.81 38.29 4.30
6550 9061 7.964604 AGTGTCTCAACTTTGTACTAAATCC 57.035 36.000 0.00 0.00 0.00 3.01
6552 9063 8.157476 AGTGTCTCAACTTTGTACTAAATCCAT 58.843 33.333 0.00 0.00 0.00 3.41
6553 9064 8.443937 GTGTCTCAACTTTGTACTAAATCCATC 58.556 37.037 0.00 0.00 0.00 3.51
6554 9065 8.375506 TGTCTCAACTTTGTACTAAATCCATCT 58.624 33.333 0.00 0.00 0.00 2.90
6555 9066 9.871238 GTCTCAACTTTGTACTAAATCCATCTA 57.129 33.333 0.00 0.00 0.00 1.98
6556 9067 9.871238 TCTCAACTTTGTACTAAATCCATCTAC 57.129 33.333 0.00 0.00 0.00 2.59
6557 9068 8.697846 TCAACTTTGTACTAAATCCATCTACG 57.302 34.615 0.00 0.00 0.00 3.51
6558 9069 8.308931 TCAACTTTGTACTAAATCCATCTACGT 58.691 33.333 0.00 0.00 0.00 3.57
6559 9070 8.380644 CAACTTTGTACTAAATCCATCTACGTG 58.619 37.037 0.00 0.00 0.00 4.49
6561 9072 8.742777 ACTTTGTACTAAATCCATCTACGTGTA 58.257 33.333 0.00 0.00 0.00 2.90
6562 9073 9.745880 CTTTGTACTAAATCCATCTACGTGTAT 57.254 33.333 0.00 0.00 0.00 2.29
6568 9079 9.128404 ACTAAATCCATCTACGTGTATAAGTCA 57.872 33.333 0.00 0.00 0.00 3.41
6571 9082 8.410673 AATCCATCTACGTGTATAAGTCATCT 57.589 34.615 0.00 0.00 0.00 2.90
6574 9085 9.000486 TCCATCTACGTGTATAAGTCATCTTAG 58.000 37.037 0.00 0.00 39.17 2.18
6575 9086 8.237949 CCATCTACGTGTATAAGTCATCTTAGG 58.762 40.741 0.00 0.00 39.17 2.69
6576 9087 8.784994 CATCTACGTGTATAAGTCATCTTAGGT 58.215 37.037 0.00 0.00 39.17 3.08
6577 9088 8.743085 TCTACGTGTATAAGTCATCTTAGGTT 57.257 34.615 0.00 0.00 39.17 3.50
6578 9089 8.618677 TCTACGTGTATAAGTCATCTTAGGTTG 58.381 37.037 0.00 0.00 39.17 3.77
6579 9090 7.166691 ACGTGTATAAGTCATCTTAGGTTGT 57.833 36.000 0.00 0.00 39.17 3.32
6580 9091 7.033791 ACGTGTATAAGTCATCTTAGGTTGTG 58.966 38.462 0.00 0.00 39.17 3.33
6581 9092 6.019801 CGTGTATAAGTCATCTTAGGTTGTGC 60.020 42.308 0.00 0.00 39.17 4.57
6582 9093 6.816640 GTGTATAAGTCATCTTAGGTTGTGCA 59.183 38.462 0.00 0.00 39.17 4.57
6583 9094 6.816640 TGTATAAGTCATCTTAGGTTGTGCAC 59.183 38.462 10.75 10.75 39.17 4.57
6596 9345 1.681327 GTGCACCTAGACGGAGGGA 60.681 63.158 5.22 0.00 41.36 4.20
6604 9353 3.525199 ACCTAGACGGAGGGAGTACTAAA 59.475 47.826 0.00 0.00 41.36 1.85
6605 9354 4.136051 CCTAGACGGAGGGAGTACTAAAG 58.864 52.174 0.00 0.00 32.39 1.85
6606 9355 3.735720 AGACGGAGGGAGTACTAAAGT 57.264 47.619 0.00 0.00 0.00 2.66
6607 9356 4.044946 AGACGGAGGGAGTACTAAAGTT 57.955 45.455 0.00 0.00 0.00 2.66
6608 9357 5.184892 AGACGGAGGGAGTACTAAAGTTA 57.815 43.478 0.00 0.00 0.00 2.24
6609 9358 5.192176 AGACGGAGGGAGTACTAAAGTTAG 58.808 45.833 0.00 0.00 36.82 2.34
6610 9359 4.928263 ACGGAGGGAGTACTAAAGTTAGT 58.072 43.478 8.67 8.67 45.39 2.24
6611 9360 6.067217 ACGGAGGGAGTACTAAAGTTAGTA 57.933 41.667 6.81 6.81 43.36 1.82
6643 9392 6.152638 AGAAACTTATTTTGGGATGGAGGA 57.847 37.500 0.00 0.00 0.00 3.71
6651 9400 3.951563 TTGGGATGGAGGAAAGTATGG 57.048 47.619 0.00 0.00 0.00 2.74
6734 11680 6.013032 CCCAAGATCTCCAAGACCACATATAT 60.013 42.308 0.00 0.00 0.00 0.86
6735 11681 7.180946 CCCAAGATCTCCAAGACCACATATATA 59.819 40.741 0.00 0.00 0.00 0.86
6799 11747 8.792830 AGCTTTATTAGATAGCAACTGTTCAA 57.207 30.769 0.00 0.00 37.37 2.69
6822 11770 7.293299 TCAAGGATACATAAATGATCTGGAGGT 59.707 37.037 0.00 0.00 41.41 3.85
6854 11802 4.318332 CACATATGACGCCCAACATCTAT 58.682 43.478 10.38 0.00 0.00 1.98
6855 11803 4.756642 CACATATGACGCCCAACATCTATT 59.243 41.667 10.38 0.00 0.00 1.73
6856 11804 5.239306 CACATATGACGCCCAACATCTATTT 59.761 40.000 10.38 0.00 0.00 1.40
6857 11805 5.827797 ACATATGACGCCCAACATCTATTTT 59.172 36.000 10.38 0.00 0.00 1.82
6858 11806 6.321181 ACATATGACGCCCAACATCTATTTTT 59.679 34.615 10.38 0.00 0.00 1.94
6877 11825 3.478857 TTTTGAAGCCAAGACCGTAGA 57.521 42.857 0.00 0.00 33.23 2.59
6878 11826 3.478857 TTTGAAGCCAAGACCGTAGAA 57.521 42.857 0.00 0.00 33.23 2.10
6879 11827 2.450609 TGAAGCCAAGACCGTAGAAC 57.549 50.000 0.00 0.00 0.00 3.01
6880 11828 1.689813 TGAAGCCAAGACCGTAGAACA 59.310 47.619 0.00 0.00 0.00 3.18
6881 11829 2.103432 TGAAGCCAAGACCGTAGAACAA 59.897 45.455 0.00 0.00 0.00 2.83
6882 11830 3.244422 TGAAGCCAAGACCGTAGAACAAT 60.244 43.478 0.00 0.00 0.00 2.71
6883 11831 3.418684 AGCCAAGACCGTAGAACAATT 57.581 42.857 0.00 0.00 0.00 2.32
6884 11832 3.074412 AGCCAAGACCGTAGAACAATTG 58.926 45.455 3.24 3.24 0.00 2.32
6885 11833 2.812011 GCCAAGACCGTAGAACAATTGT 59.188 45.455 4.92 4.92 0.00 2.71
6886 11834 3.252458 GCCAAGACCGTAGAACAATTGTT 59.748 43.478 23.49 23.49 41.64 2.83
6903 11851 9.974980 AACAATTGTTCTACGGTAAATTTTCAT 57.025 25.926 18.13 0.00 31.64 2.57
6904 11852 9.974980 ACAATTGTTCTACGGTAAATTTTCATT 57.025 25.926 4.92 0.00 0.00 2.57
6937 11885 7.986085 ATGTACATATACAAAGCCTGAATCC 57.014 36.000 6.56 0.00 44.47 3.01
6938 11886 6.894682 TGTACATATACAAAGCCTGAATCCA 58.105 36.000 0.00 0.00 38.40 3.41
6939 11887 6.992123 TGTACATATACAAAGCCTGAATCCAG 59.008 38.462 0.00 0.00 38.40 3.86
6952 11900 5.011090 CTGAATCCAGGTACGAATCTTGA 57.989 43.478 0.00 0.00 36.77 3.02
6953 11901 5.011090 TGAATCCAGGTACGAATCTTGAG 57.989 43.478 0.00 0.00 0.00 3.02
6954 11902 4.466370 TGAATCCAGGTACGAATCTTGAGT 59.534 41.667 0.00 0.00 0.00 3.41
6955 11903 3.868757 TCCAGGTACGAATCTTGAGTG 57.131 47.619 0.00 0.00 0.00 3.51
6956 11904 2.094182 TCCAGGTACGAATCTTGAGTGC 60.094 50.000 0.00 0.00 0.00 4.40
6957 11905 2.271800 CAGGTACGAATCTTGAGTGCC 58.728 52.381 0.00 0.00 40.27 5.01
6958 11906 2.180276 AGGTACGAATCTTGAGTGCCT 58.820 47.619 0.00 0.00 44.24 4.75
6959 11907 2.567615 AGGTACGAATCTTGAGTGCCTT 59.432 45.455 0.00 0.00 46.29 4.35
6960 11908 3.767673 AGGTACGAATCTTGAGTGCCTTA 59.232 43.478 0.00 0.00 46.29 2.69
6961 11909 4.406003 AGGTACGAATCTTGAGTGCCTTAT 59.594 41.667 0.00 0.00 46.29 1.73
6962 11910 4.745620 GGTACGAATCTTGAGTGCCTTATC 59.254 45.833 0.00 0.00 37.60 1.75
6963 11911 4.744795 ACGAATCTTGAGTGCCTTATCT 57.255 40.909 0.00 0.00 0.00 1.98
6964 11912 4.437239 ACGAATCTTGAGTGCCTTATCTG 58.563 43.478 0.00 0.00 0.00 2.90
6965 11913 3.247173 CGAATCTTGAGTGCCTTATCTGC 59.753 47.826 0.00 0.00 0.00 4.26
6966 11914 4.450053 GAATCTTGAGTGCCTTATCTGCT 58.550 43.478 0.00 0.00 0.00 4.24
6967 11915 3.988976 TCTTGAGTGCCTTATCTGCTT 57.011 42.857 0.00 0.00 0.00 3.91
6968 11916 4.292186 TCTTGAGTGCCTTATCTGCTTT 57.708 40.909 0.00 0.00 0.00 3.51
6969 11917 5.420725 TCTTGAGTGCCTTATCTGCTTTA 57.579 39.130 0.00 0.00 0.00 1.85
6970 11918 5.423015 TCTTGAGTGCCTTATCTGCTTTAG 58.577 41.667 0.00 0.00 0.00 1.85
6971 11919 3.535561 TGAGTGCCTTATCTGCTTTAGC 58.464 45.455 0.00 0.00 42.50 3.09
6972 11920 3.198635 TGAGTGCCTTATCTGCTTTAGCT 59.801 43.478 3.10 0.00 42.66 3.32
6973 11921 3.802866 AGTGCCTTATCTGCTTTAGCTC 58.197 45.455 3.10 0.00 42.66 4.09
6974 11922 3.454082 AGTGCCTTATCTGCTTTAGCTCT 59.546 43.478 3.10 0.00 42.66 4.09
6975 11923 4.651503 AGTGCCTTATCTGCTTTAGCTCTA 59.348 41.667 3.10 0.00 42.66 2.43
6976 11924 5.129485 AGTGCCTTATCTGCTTTAGCTCTAA 59.871 40.000 3.10 0.00 42.66 2.10
6977 11925 5.465056 GTGCCTTATCTGCTTTAGCTCTAAG 59.535 44.000 3.10 0.00 42.66 2.18
6978 11926 5.129485 TGCCTTATCTGCTTTAGCTCTAAGT 59.871 40.000 3.10 0.00 42.66 2.24
6979 11927 6.052360 GCCTTATCTGCTTTAGCTCTAAGTT 58.948 40.000 3.10 0.00 42.66 2.66
6980 11928 6.201997 GCCTTATCTGCTTTAGCTCTAAGTTC 59.798 42.308 3.10 0.00 42.66 3.01
6981 11929 7.496747 CCTTATCTGCTTTAGCTCTAAGTTCT 58.503 38.462 3.10 0.00 42.66 3.01
6982 11930 7.984617 CCTTATCTGCTTTAGCTCTAAGTTCTT 59.015 37.037 3.10 0.00 42.66 2.52
6983 11931 8.934507 TTATCTGCTTTAGCTCTAAGTTCTTC 57.065 34.615 3.10 0.00 42.66 2.87
6984 11932 6.597832 TCTGCTTTAGCTCTAAGTTCTTCT 57.402 37.500 3.10 0.00 42.66 2.85
6985 11933 6.998802 TCTGCTTTAGCTCTAAGTTCTTCTT 58.001 36.000 3.10 0.00 42.66 2.52
6986 11934 7.445945 TCTGCTTTAGCTCTAAGTTCTTCTTT 58.554 34.615 3.10 0.00 42.66 2.52
6987 11935 7.934120 TCTGCTTTAGCTCTAAGTTCTTCTTTT 59.066 33.333 3.10 0.00 42.66 2.27
6988 11936 7.865707 TGCTTTAGCTCTAAGTTCTTCTTTTG 58.134 34.615 3.10 0.00 42.66 2.44
6989 11937 6.799441 GCTTTAGCTCTAAGTTCTTCTTTTGC 59.201 38.462 9.49 0.00 36.53 3.68
6990 11938 6.803154 TTAGCTCTAAGTTCTTCTTTTGCC 57.197 37.500 0.00 0.00 37.56 4.52
6991 11939 4.718961 AGCTCTAAGTTCTTCTTTTGCCA 58.281 39.130 0.00 0.00 37.56 4.92
6992 11940 5.320277 AGCTCTAAGTTCTTCTTTTGCCAT 58.680 37.500 0.00 0.00 37.56 4.40
6993 11941 5.182760 AGCTCTAAGTTCTTCTTTTGCCATG 59.817 40.000 0.00 0.00 37.56 3.66
6994 11942 5.376854 TCTAAGTTCTTCTTTTGCCATGC 57.623 39.130 0.00 0.00 37.56 4.06
6995 11943 3.391506 AAGTTCTTCTTTTGCCATGCC 57.608 42.857 0.00 0.00 31.57 4.40
6996 11944 2.601905 AGTTCTTCTTTTGCCATGCCT 58.398 42.857 0.00 0.00 0.00 4.75
6997 11945 2.967887 AGTTCTTCTTTTGCCATGCCTT 59.032 40.909 0.00 0.00 0.00 4.35
6998 11946 3.006217 AGTTCTTCTTTTGCCATGCCTTC 59.994 43.478 0.00 0.00 0.00 3.46
6999 11947 2.880443 TCTTCTTTTGCCATGCCTTCT 58.120 42.857 0.00 0.00 0.00 2.85
7000 11948 3.233507 TCTTCTTTTGCCATGCCTTCTT 58.766 40.909 0.00 0.00 0.00 2.52
7001 11949 3.642848 TCTTCTTTTGCCATGCCTTCTTT 59.357 39.130 0.00 0.00 0.00 2.52
7002 11950 3.665745 TCTTTTGCCATGCCTTCTTTC 57.334 42.857 0.00 0.00 0.00 2.62
7003 11951 2.964464 TCTTTTGCCATGCCTTCTTTCA 59.036 40.909 0.00 0.00 0.00 2.69
7004 11952 3.387374 TCTTTTGCCATGCCTTCTTTCAA 59.613 39.130 0.00 0.00 0.00 2.69
7005 11953 3.834489 TTTGCCATGCCTTCTTTCAAA 57.166 38.095 0.00 0.00 0.00 2.69
7006 11954 4.354893 TTTGCCATGCCTTCTTTCAAAT 57.645 36.364 0.00 0.00 0.00 2.32
7007 11955 5.480642 TTTGCCATGCCTTCTTTCAAATA 57.519 34.783 0.00 0.00 0.00 1.40
7008 11956 4.724074 TGCCATGCCTTCTTTCAAATAG 57.276 40.909 0.00 0.00 0.00 1.73
7009 11957 4.343231 TGCCATGCCTTCTTTCAAATAGA 58.657 39.130 0.00 0.00 0.00 1.98
7010 11958 4.771577 TGCCATGCCTTCTTTCAAATAGAA 59.228 37.500 0.00 0.00 0.00 2.10
7011 11959 5.105063 GCCATGCCTTCTTTCAAATAGAAC 58.895 41.667 0.00 0.00 35.56 3.01
7012 11960 5.105595 GCCATGCCTTCTTTCAAATAGAACT 60.106 40.000 0.00 0.00 35.56 3.01
7013 11961 6.573094 GCCATGCCTTCTTTCAAATAGAACTT 60.573 38.462 0.00 0.00 35.56 2.66
7014 11962 7.031975 CCATGCCTTCTTTCAAATAGAACTTC 58.968 38.462 0.00 0.00 35.56 3.01
7015 11963 6.575162 TGCCTTCTTTCAAATAGAACTTCC 57.425 37.500 0.00 0.00 35.56 3.46
7016 11964 6.068010 TGCCTTCTTTCAAATAGAACTTCCA 58.932 36.000 0.00 0.00 35.56 3.53
7017 11965 6.207417 TGCCTTCTTTCAAATAGAACTTCCAG 59.793 38.462 0.00 0.00 35.56 3.86
7018 11966 6.349694 GCCTTCTTTCAAATAGAACTTCCAGG 60.350 42.308 0.00 0.00 35.56 4.45
7019 11967 6.717084 CCTTCTTTCAAATAGAACTTCCAGGT 59.283 38.462 0.00 0.00 35.56 4.00
7020 11968 7.883311 CCTTCTTTCAAATAGAACTTCCAGGTA 59.117 37.037 0.00 0.00 35.56 3.08
7021 11969 9.454859 CTTCTTTCAAATAGAACTTCCAGGTAT 57.545 33.333 0.00 0.00 35.56 2.73
7022 11970 9.449719 TTCTTTCAAATAGAACTTCCAGGTATC 57.550 33.333 0.00 0.00 35.56 2.24
7023 11971 8.602424 TCTTTCAAATAGAACTTCCAGGTATCA 58.398 33.333 0.00 0.00 35.56 2.15
7024 11972 9.231297 CTTTCAAATAGAACTTCCAGGTATCAA 57.769 33.333 0.00 0.00 35.56 2.57
7025 11973 9.753674 TTTCAAATAGAACTTCCAGGTATCAAT 57.246 29.630 0.00 0.00 35.56 2.57
7026 11974 8.964476 TCAAATAGAACTTCCAGGTATCAATC 57.036 34.615 0.00 0.00 0.00 2.67
7027 11975 7.710907 TCAAATAGAACTTCCAGGTATCAATCG 59.289 37.037 0.00 0.00 0.00 3.34
7028 11976 6.732896 ATAGAACTTCCAGGTATCAATCGT 57.267 37.500 0.00 0.00 0.00 3.73
7029 11977 5.422214 AGAACTTCCAGGTATCAATCGTT 57.578 39.130 0.00 0.00 0.00 3.85
7030 11978 5.178797 AGAACTTCCAGGTATCAATCGTTG 58.821 41.667 0.00 0.00 0.00 4.10
7031 11979 3.873910 ACTTCCAGGTATCAATCGTTGG 58.126 45.455 0.00 0.00 0.00 3.77
7032 11980 3.517901 ACTTCCAGGTATCAATCGTTGGA 59.482 43.478 0.00 0.00 0.00 3.53
7033 11981 3.819564 TCCAGGTATCAATCGTTGGAG 57.180 47.619 0.00 0.00 0.00 3.86
7034 11982 3.104512 TCCAGGTATCAATCGTTGGAGT 58.895 45.455 0.00 0.00 0.00 3.85
7035 11983 4.283337 TCCAGGTATCAATCGTTGGAGTA 58.717 43.478 0.00 0.00 0.00 2.59
7036 11984 4.341235 TCCAGGTATCAATCGTTGGAGTAG 59.659 45.833 0.00 0.00 0.00 2.57
7037 11985 4.051922 CAGGTATCAATCGTTGGAGTAGC 58.948 47.826 0.00 0.00 0.00 3.58
7038 11986 3.961408 AGGTATCAATCGTTGGAGTAGCT 59.039 43.478 0.00 0.00 0.00 3.32
7039 11987 4.038162 AGGTATCAATCGTTGGAGTAGCTC 59.962 45.833 0.00 0.00 0.00 4.09
7040 11988 4.038162 GGTATCAATCGTTGGAGTAGCTCT 59.962 45.833 0.00 0.00 0.00 4.09
7041 11989 4.744795 ATCAATCGTTGGAGTAGCTCTT 57.255 40.909 0.00 0.00 0.00 2.85
7042 11990 4.111375 TCAATCGTTGGAGTAGCTCTTC 57.889 45.455 0.00 0.00 0.00 2.87
7043 11991 3.764434 TCAATCGTTGGAGTAGCTCTTCT 59.236 43.478 0.00 0.00 0.00 2.85
7044 11992 3.791973 ATCGTTGGAGTAGCTCTTCTG 57.208 47.619 0.00 0.00 0.00 3.02
7045 11993 2.791655 TCGTTGGAGTAGCTCTTCTGA 58.208 47.619 0.00 0.00 0.00 3.27
7046 11994 3.154710 TCGTTGGAGTAGCTCTTCTGAA 58.845 45.455 0.00 0.00 0.00 3.02
7047 11995 3.191581 TCGTTGGAGTAGCTCTTCTGAAG 59.808 47.826 11.18 11.18 0.00 3.02
7048 11996 3.191581 CGTTGGAGTAGCTCTTCTGAAGA 59.808 47.826 18.40 18.40 35.87 2.87
7049 11997 4.142271 CGTTGGAGTAGCTCTTCTGAAGAT 60.142 45.833 19.61 9.34 36.82 2.40
7050 11998 5.348164 GTTGGAGTAGCTCTTCTGAAGATC 58.652 45.833 19.61 15.72 36.82 2.75
7051 11999 4.865905 TGGAGTAGCTCTTCTGAAGATCT 58.134 43.478 22.77 22.77 37.68 2.75
7052 12000 5.268387 TGGAGTAGCTCTTCTGAAGATCTT 58.732 41.667 23.93 7.95 35.71 2.40
7053 12001 5.126869 TGGAGTAGCTCTTCTGAAGATCTTG 59.873 44.000 23.93 12.89 35.71 3.02
7054 12002 5.127031 GGAGTAGCTCTTCTGAAGATCTTGT 59.873 44.000 23.93 14.18 35.71 3.16
7055 12003 6.320164 GGAGTAGCTCTTCTGAAGATCTTGTA 59.680 42.308 23.93 8.21 35.71 2.41
7056 12004 7.147983 GGAGTAGCTCTTCTGAAGATCTTGTAA 60.148 40.741 23.93 7.91 35.71 2.41
7057 12005 8.305046 AGTAGCTCTTCTGAAGATCTTGTAAT 57.695 34.615 23.93 7.61 35.71 1.89
7058 12006 8.757877 AGTAGCTCTTCTGAAGATCTTGTAATT 58.242 33.333 23.93 5.37 35.71 1.40
7059 12007 9.377312 GTAGCTCTTCTGAAGATCTTGTAATTT 57.623 33.333 23.93 5.23 35.71 1.82
7060 12008 8.491331 AGCTCTTCTGAAGATCTTGTAATTTC 57.509 34.615 19.61 0.00 36.82 2.17
7061 12009 8.320617 AGCTCTTCTGAAGATCTTGTAATTTCT 58.679 33.333 19.61 0.00 36.82 2.52
7062 12010 8.389603 GCTCTTCTGAAGATCTTGTAATTTCTG 58.610 37.037 19.61 0.83 36.82 3.02
7063 12011 8.261492 TCTTCTGAAGATCTTGTAATTTCTGC 57.739 34.615 14.00 0.00 31.20 4.26
7064 12012 8.099537 TCTTCTGAAGATCTTGTAATTTCTGCT 58.900 33.333 14.00 0.00 31.20 4.24
7065 12013 7.840342 TCTGAAGATCTTGTAATTTCTGCTC 57.160 36.000 14.00 0.00 0.00 4.26
7066 12014 7.389232 TCTGAAGATCTTGTAATTTCTGCTCA 58.611 34.615 14.00 0.00 0.00 4.26
7067 12015 8.045507 TCTGAAGATCTTGTAATTTCTGCTCAT 58.954 33.333 14.00 0.00 0.00 2.90
7068 12016 8.206325 TGAAGATCTTGTAATTTCTGCTCATC 57.794 34.615 14.00 0.00 0.00 2.92
7069 12017 7.281774 TGAAGATCTTGTAATTTCTGCTCATCC 59.718 37.037 14.00 0.00 0.00 3.51
7070 12018 6.656902 AGATCTTGTAATTTCTGCTCATCCA 58.343 36.000 0.00 0.00 0.00 3.41
7071 12019 7.114754 AGATCTTGTAATTTCTGCTCATCCAA 58.885 34.615 0.00 0.00 0.00 3.53
7072 12020 7.613022 AGATCTTGTAATTTCTGCTCATCCAAA 59.387 33.333 0.00 0.00 0.00 3.28
7073 12021 7.707624 TCTTGTAATTTCTGCTCATCCAAAT 57.292 32.000 0.00 0.00 0.00 2.32
7074 12022 8.806429 TCTTGTAATTTCTGCTCATCCAAATA 57.194 30.769 0.00 0.00 0.00 1.40
7075 12023 8.677300 TCTTGTAATTTCTGCTCATCCAAATAC 58.323 33.333 0.00 0.00 0.00 1.89
7076 12024 8.579850 TTGTAATTTCTGCTCATCCAAATACT 57.420 30.769 0.00 0.00 0.00 2.12
7077 12025 8.213518 TGTAATTTCTGCTCATCCAAATACTC 57.786 34.615 0.00 0.00 0.00 2.59
7078 12026 6.705863 AATTTCTGCTCATCCAAATACTCC 57.294 37.500 0.00 0.00 0.00 3.85
7079 12027 4.842531 TTCTGCTCATCCAAATACTCCA 57.157 40.909 0.00 0.00 0.00 3.86
7080 12028 4.412796 TCTGCTCATCCAAATACTCCAG 57.587 45.455 0.00 0.00 0.00 3.86
7081 12029 2.877168 CTGCTCATCCAAATACTCCAGC 59.123 50.000 0.00 0.00 0.00 4.85
7082 12030 2.239402 TGCTCATCCAAATACTCCAGCA 59.761 45.455 0.00 0.00 33.31 4.41
7083 12031 3.117776 TGCTCATCCAAATACTCCAGCAT 60.118 43.478 0.00 0.00 30.79 3.79
7084 12032 3.501445 GCTCATCCAAATACTCCAGCATC 59.499 47.826 0.00 0.00 0.00 3.91
7085 12033 4.070716 CTCATCCAAATACTCCAGCATCC 58.929 47.826 0.00 0.00 0.00 3.51
7086 12034 3.152341 CATCCAAATACTCCAGCATCCC 58.848 50.000 0.00 0.00 0.00 3.85
7087 12035 2.204463 TCCAAATACTCCAGCATCCCA 58.796 47.619 0.00 0.00 0.00 4.37
7088 12036 2.785269 TCCAAATACTCCAGCATCCCAT 59.215 45.455 0.00 0.00 0.00 4.00
7089 12037 3.152341 CCAAATACTCCAGCATCCCATC 58.848 50.000 0.00 0.00 0.00 3.51
7090 12038 3.435457 CCAAATACTCCAGCATCCCATCA 60.435 47.826 0.00 0.00 0.00 3.07
7091 12039 4.404640 CAAATACTCCAGCATCCCATCAT 58.595 43.478 0.00 0.00 0.00 2.45
7092 12040 3.715638 ATACTCCAGCATCCCATCATG 57.284 47.619 0.00 0.00 0.00 3.07
7093 12041 1.514983 ACTCCAGCATCCCATCATGA 58.485 50.000 0.00 0.00 0.00 3.07
7094 12042 2.063425 ACTCCAGCATCCCATCATGAT 58.937 47.619 1.18 1.18 0.00 2.45
7095 12043 2.040012 ACTCCAGCATCCCATCATGATC 59.960 50.000 4.86 0.00 0.00 2.92
7096 12044 2.039879 CTCCAGCATCCCATCATGATCA 59.960 50.000 4.86 0.00 0.00 2.92
7097 12045 2.647802 TCCAGCATCCCATCATGATCAT 59.352 45.455 4.86 1.18 0.00 2.45
7098 12046 2.755103 CCAGCATCCCATCATGATCATG 59.245 50.000 26.79 26.79 40.09 3.07
7099 12047 3.421844 CAGCATCCCATCATGATCATGT 58.578 45.455 30.01 17.46 39.72 3.21
7100 12048 3.440522 CAGCATCCCATCATGATCATGTC 59.559 47.826 30.01 13.01 39.72 3.06
7101 12049 2.753452 GCATCCCATCATGATCATGTCC 59.247 50.000 30.01 10.74 39.72 4.02
7102 12050 3.812882 GCATCCCATCATGATCATGTCCA 60.813 47.826 30.01 15.44 39.72 4.02
7103 12051 4.600062 CATCCCATCATGATCATGTCCAT 58.400 43.478 30.01 16.88 39.72 3.41
7104 12052 5.751586 CATCCCATCATGATCATGTCCATA 58.248 41.667 30.01 14.75 39.72 2.74
7105 12053 5.431179 TCCCATCATGATCATGTCCATAG 57.569 43.478 30.01 17.23 39.72 2.23
7106 12054 3.945921 CCCATCATGATCATGTCCATAGC 59.054 47.826 30.01 0.00 39.72 2.97
7107 12055 4.566907 CCCATCATGATCATGTCCATAGCA 60.567 45.833 30.01 12.73 39.72 3.49
7108 12056 5.007682 CCATCATGATCATGTCCATAGCAA 58.992 41.667 30.01 12.07 39.72 3.91
7109 12057 5.475564 CCATCATGATCATGTCCATAGCAAA 59.524 40.000 30.01 11.40 39.72 3.68
7110 12058 6.152831 CCATCATGATCATGTCCATAGCAAAT 59.847 38.462 30.01 13.01 39.72 2.32
7111 12059 7.309805 CCATCATGATCATGTCCATAGCAAATT 60.310 37.037 30.01 0.00 39.72 1.82
7112 12060 7.210718 TCATGATCATGTCCATAGCAAATTC 57.789 36.000 30.01 0.00 39.72 2.17
7113 12061 7.002276 TCATGATCATGTCCATAGCAAATTCT 58.998 34.615 30.01 0.00 39.72 2.40
7114 12062 6.628919 TGATCATGTCCATAGCAAATTCTG 57.371 37.500 0.00 0.00 0.00 3.02
7115 12063 5.533528 TGATCATGTCCATAGCAAATTCTGG 59.466 40.000 0.00 0.00 0.00 3.86
7116 12064 4.858850 TCATGTCCATAGCAAATTCTGGT 58.141 39.130 0.00 0.00 39.65 4.00
7117 12065 4.641541 TCATGTCCATAGCAAATTCTGGTG 59.358 41.667 0.00 0.00 36.95 4.17
7118 12066 3.355378 TGTCCATAGCAAATTCTGGTGG 58.645 45.455 0.00 0.00 36.95 4.61
7119 12067 2.689983 GTCCATAGCAAATTCTGGTGGG 59.310 50.000 0.00 5.09 36.95 4.61
7120 12068 2.580322 TCCATAGCAAATTCTGGTGGGA 59.420 45.455 0.00 9.07 37.74 4.37
7121 12069 2.954318 CCATAGCAAATTCTGGTGGGAG 59.046 50.000 0.00 0.00 36.95 4.30
7122 12070 3.624777 CATAGCAAATTCTGGTGGGAGT 58.375 45.455 0.00 0.00 36.95 3.85
7123 12071 1.915141 AGCAAATTCTGGTGGGAGTG 58.085 50.000 0.00 0.00 33.42 3.51
7124 12072 1.145738 AGCAAATTCTGGTGGGAGTGT 59.854 47.619 0.00 0.00 33.42 3.55
7125 12073 2.375174 AGCAAATTCTGGTGGGAGTGTA 59.625 45.455 0.00 0.00 33.42 2.90
7126 12074 2.749621 GCAAATTCTGGTGGGAGTGTAG 59.250 50.000 0.00 0.00 0.00 2.74
7127 12075 2.749621 CAAATTCTGGTGGGAGTGTAGC 59.250 50.000 0.00 0.00 0.00 3.58
7128 12076 1.958288 ATTCTGGTGGGAGTGTAGCT 58.042 50.000 0.00 0.00 0.00 3.32
7129 12077 2.615986 TTCTGGTGGGAGTGTAGCTA 57.384 50.000 0.00 0.00 0.00 3.32
7130 12078 2.145397 TCTGGTGGGAGTGTAGCTAG 57.855 55.000 0.00 0.00 0.00 3.42
7131 12079 1.639108 TCTGGTGGGAGTGTAGCTAGA 59.361 52.381 0.00 0.00 0.00 2.43
7132 12080 1.751924 CTGGTGGGAGTGTAGCTAGAC 59.248 57.143 12.99 12.99 0.00 2.59
7133 12081 1.358103 TGGTGGGAGTGTAGCTAGACT 59.642 52.381 22.56 22.56 31.89 3.24
7134 12082 1.751924 GGTGGGAGTGTAGCTAGACTG 59.248 57.143 26.79 0.00 29.05 3.51
7135 12083 2.620886 GGTGGGAGTGTAGCTAGACTGA 60.621 54.545 26.79 8.79 29.05 3.41
7136 12084 2.424246 GTGGGAGTGTAGCTAGACTGAC 59.576 54.545 26.79 18.47 29.05 3.51
7137 12085 2.041216 TGGGAGTGTAGCTAGACTGACA 59.959 50.000 26.79 20.56 29.05 3.58
7138 12086 3.090037 GGGAGTGTAGCTAGACTGACAA 58.910 50.000 26.79 0.00 29.05 3.18
7139 12087 3.510360 GGGAGTGTAGCTAGACTGACAAA 59.490 47.826 26.79 0.00 29.05 2.83
7140 12088 4.381079 GGGAGTGTAGCTAGACTGACAAAG 60.381 50.000 26.79 0.00 29.05 2.77
7141 12089 4.381079 GGAGTGTAGCTAGACTGACAAAGG 60.381 50.000 26.79 0.00 29.05 3.11
7142 12090 4.153411 AGTGTAGCTAGACTGACAAAGGT 58.847 43.478 21.83 0.00 0.00 3.50
7143 12091 4.218852 AGTGTAGCTAGACTGACAAAGGTC 59.781 45.833 21.83 0.00 44.57 3.85
7144 12092 4.218852 GTGTAGCTAGACTGACAAAGGTCT 59.781 45.833 13.56 0.00 44.61 3.85
7145 12093 3.951775 AGCTAGACTGACAAAGGTCTG 57.048 47.619 6.18 0.00 44.61 3.51
7152 12100 3.475566 CTGACAAAGGTCTGTGAAGGA 57.524 47.619 0.00 0.00 44.61 3.36
7153 12101 3.397482 CTGACAAAGGTCTGTGAAGGAG 58.603 50.000 0.00 0.00 44.61 3.69
7154 12102 3.038280 TGACAAAGGTCTGTGAAGGAGA 58.962 45.455 0.00 0.00 44.61 3.71
7155 12103 3.648067 TGACAAAGGTCTGTGAAGGAGAT 59.352 43.478 0.00 0.00 44.61 2.75
7156 12104 3.999663 GACAAAGGTCTGTGAAGGAGATG 59.000 47.826 0.00 0.00 40.99 2.90
7157 12105 3.648067 ACAAAGGTCTGTGAAGGAGATGA 59.352 43.478 0.00 0.00 0.00 2.92
7158 12106 3.971245 AAGGTCTGTGAAGGAGATGAC 57.029 47.619 0.00 0.00 0.00 3.06
7159 12107 3.182887 AGGTCTGTGAAGGAGATGACT 57.817 47.619 0.00 0.00 0.00 3.41
7160 12108 4.323569 AGGTCTGTGAAGGAGATGACTA 57.676 45.455 0.00 0.00 0.00 2.59
7161 12109 4.678256 AGGTCTGTGAAGGAGATGACTAA 58.322 43.478 0.00 0.00 0.00 2.24
7162 12110 5.276440 AGGTCTGTGAAGGAGATGACTAAT 58.724 41.667 0.00 0.00 0.00 1.73
7163 12111 6.436027 AGGTCTGTGAAGGAGATGACTAATA 58.564 40.000 0.00 0.00 0.00 0.98
7164 12112 7.072562 AGGTCTGTGAAGGAGATGACTAATAT 58.927 38.462 0.00 0.00 0.00 1.28
7165 12113 7.232534 AGGTCTGTGAAGGAGATGACTAATATC 59.767 40.741 0.00 0.00 0.00 1.63
7166 12114 7.014711 GGTCTGTGAAGGAGATGACTAATATCA 59.985 40.741 0.00 0.00 0.00 2.15
7167 12115 7.865385 GTCTGTGAAGGAGATGACTAATATCAC 59.135 40.741 0.00 0.00 36.19 3.06
7168 12116 7.782168 TCTGTGAAGGAGATGACTAATATCACT 59.218 37.037 0.00 0.00 36.51 3.41
7169 12117 8.996651 TGTGAAGGAGATGACTAATATCACTA 57.003 34.615 0.00 0.00 36.51 2.74
7170 12118 9.072375 TGTGAAGGAGATGACTAATATCACTAG 57.928 37.037 0.00 0.00 36.51 2.57
7171 12119 8.026607 GTGAAGGAGATGACTAATATCACTAGC 58.973 40.741 0.00 0.00 33.65 3.42
7172 12120 7.177568 TGAAGGAGATGACTAATATCACTAGCC 59.822 40.741 0.00 0.00 0.00 3.93
7173 12121 6.799827 AGGAGATGACTAATATCACTAGCCT 58.200 40.000 0.00 0.00 0.00 4.58
7174 12122 6.889722 AGGAGATGACTAATATCACTAGCCTC 59.110 42.308 0.00 0.00 0.00 4.70
7175 12123 6.183360 GGAGATGACTAATATCACTAGCCTCG 60.183 46.154 0.00 0.00 0.00 4.63
7176 12124 6.477253 AGATGACTAATATCACTAGCCTCGA 58.523 40.000 0.00 0.00 0.00 4.04
7177 12125 6.597672 AGATGACTAATATCACTAGCCTCGAG 59.402 42.308 5.13 5.13 0.00 4.04
7178 12126 4.456222 TGACTAATATCACTAGCCTCGAGC 59.544 45.833 6.99 2.54 44.25 5.03
7197 12145 3.427161 GCACCTCCTGCAATGAAATAC 57.573 47.619 0.00 0.00 46.29 1.89
7198 12146 3.019564 GCACCTCCTGCAATGAAATACT 58.980 45.455 0.00 0.00 46.29 2.12
7199 12147 3.065925 GCACCTCCTGCAATGAAATACTC 59.934 47.826 0.00 0.00 46.29 2.59
7200 12148 4.521146 CACCTCCTGCAATGAAATACTCT 58.479 43.478 0.00 0.00 0.00 3.24
7201 12149 4.334759 CACCTCCTGCAATGAAATACTCTG 59.665 45.833 0.00 0.00 0.00 3.35
7202 12150 4.225942 ACCTCCTGCAATGAAATACTCTGA 59.774 41.667 0.00 0.00 0.00 3.27
7203 12151 4.574013 CCTCCTGCAATGAAATACTCTGAC 59.426 45.833 0.00 0.00 0.00 3.51
7204 12152 5.426504 CTCCTGCAATGAAATACTCTGACT 58.573 41.667 0.00 0.00 0.00 3.41
7205 12153 5.181009 TCCTGCAATGAAATACTCTGACTG 58.819 41.667 0.00 0.00 0.00 3.51
7206 12154 4.940046 CCTGCAATGAAATACTCTGACTGT 59.060 41.667 0.00 0.00 0.00 3.55
7207 12155 5.413833 CCTGCAATGAAATACTCTGACTGTT 59.586 40.000 0.00 0.00 0.00 3.16
7208 12156 6.595326 CCTGCAATGAAATACTCTGACTGTTA 59.405 38.462 0.00 0.00 0.00 2.41
7209 12157 7.201591 CCTGCAATGAAATACTCTGACTGTTAG 60.202 40.741 0.00 0.00 0.00 2.34
7210 12158 6.092670 TGCAATGAAATACTCTGACTGTTAGC 59.907 38.462 0.00 0.00 0.00 3.09
7211 12159 6.092670 GCAATGAAATACTCTGACTGTTAGCA 59.907 38.462 0.00 0.00 0.00 3.49
7212 12160 7.361201 GCAATGAAATACTCTGACTGTTAGCAA 60.361 37.037 0.00 0.00 0.00 3.91
7213 12161 8.506437 CAATGAAATACTCTGACTGTTAGCAAA 58.494 33.333 0.00 0.00 0.00 3.68
7214 12162 8.798859 ATGAAATACTCTGACTGTTAGCAAAT 57.201 30.769 0.00 0.00 0.00 2.32
7215 12163 8.032952 TGAAATACTCTGACTGTTAGCAAATG 57.967 34.615 0.00 0.00 0.00 2.32
7216 12164 7.877612 TGAAATACTCTGACTGTTAGCAAATGA 59.122 33.333 0.00 0.00 0.00 2.57
7217 12165 7.840342 AATACTCTGACTGTTAGCAAATGAG 57.160 36.000 0.00 0.00 0.00 2.90
7218 12166 5.220710 ACTCTGACTGTTAGCAAATGAGT 57.779 39.130 0.00 0.00 0.00 3.41
7219 12167 5.615289 ACTCTGACTGTTAGCAAATGAGTT 58.385 37.500 0.00 0.00 0.00 3.01
7220 12168 5.698545 ACTCTGACTGTTAGCAAATGAGTTC 59.301 40.000 0.00 0.00 0.00 3.01
7221 12169 5.610398 TCTGACTGTTAGCAAATGAGTTCA 58.390 37.500 0.00 0.00 0.00 3.18
7222 12170 5.698089 TCTGACTGTTAGCAAATGAGTTCAG 59.302 40.000 0.00 0.00 0.00 3.02
7223 12171 5.368145 TGACTGTTAGCAAATGAGTTCAGT 58.632 37.500 0.00 0.00 37.56 3.41
7224 12172 5.822519 TGACTGTTAGCAAATGAGTTCAGTT 59.177 36.000 0.00 0.00 35.50 3.16
7232 12180 5.964958 CAAATGAGTTCAGTTGTGGGTAT 57.035 39.130 12.68 0.00 44.17 2.73
7233 12181 6.331369 CAAATGAGTTCAGTTGTGGGTATT 57.669 37.500 12.68 0.00 44.17 1.89
7234 12182 6.748132 CAAATGAGTTCAGTTGTGGGTATTT 58.252 36.000 12.68 0.00 44.17 1.40
7235 12183 6.976934 AATGAGTTCAGTTGTGGGTATTTT 57.023 33.333 0.00 0.00 0.00 1.82
7236 12184 6.976934 ATGAGTTCAGTTGTGGGTATTTTT 57.023 33.333 0.00 0.00 0.00 1.94
7237 12185 6.142818 TGAGTTCAGTTGTGGGTATTTTTG 57.857 37.500 0.00 0.00 0.00 2.44
7238 12186 4.944048 AGTTCAGTTGTGGGTATTTTTGC 58.056 39.130 0.00 0.00 0.00 3.68
7239 12187 4.649218 AGTTCAGTTGTGGGTATTTTTGCT 59.351 37.500 0.00 0.00 0.00 3.91
7240 12188 4.582701 TCAGTTGTGGGTATTTTTGCTG 57.417 40.909 0.00 0.00 0.00 4.41
7241 12189 4.211125 TCAGTTGTGGGTATTTTTGCTGA 58.789 39.130 0.00 0.00 0.00 4.26
7242 12190 4.646945 TCAGTTGTGGGTATTTTTGCTGAA 59.353 37.500 0.00 0.00 0.00 3.02
7243 12191 4.984161 CAGTTGTGGGTATTTTTGCTGAAG 59.016 41.667 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 7.554118 CACCACATATTTATGAAGGTCTGAACT 59.446 37.037 12.98 0.00 40.69 3.01
33 34 0.958091 TGCACCAACTAATGCACCAC 59.042 50.000 0.00 0.00 46.63 4.16
77 78 6.311735 AGGGGTAAGATAACACAAAACATGT 58.688 36.000 0.00 0.00 45.34 3.21
84 85 6.826741 GCAAAGATAGGGGTAAGATAACACAA 59.173 38.462 0.00 0.00 0.00 3.33
93 94 6.773976 TGAATTTGCAAAGATAGGGGTAAG 57.226 37.500 18.19 0.00 0.00 2.34
175 187 5.013704 TGGCCGTTATGATACATTAATCCCT 59.986 40.000 0.00 0.00 0.00 4.20
194 206 1.148310 GATGGAATCGTGTATGGCCG 58.852 55.000 0.00 0.00 31.13 6.13
230 242 9.602568 CAATCCAATATTCCAAAACATGATCAA 57.397 29.630 0.00 0.00 0.00 2.57
243 255 8.632679 TCAGATTTGTAAGCAATCCAATATTCC 58.367 33.333 0.00 0.00 34.18 3.01
248 260 9.729281 ATTTTTCAGATTTGTAAGCAATCCAAT 57.271 25.926 0.00 0.00 34.18 3.16
326 339 9.784531 TTTCAAGAATGGCCATTTGTAATTTTA 57.215 25.926 31.13 6.86 0.00 1.52
395 408 5.794894 TGACCTATGTCTTTGAAAGGAGAC 58.205 41.667 4.94 0.00 42.28 3.36
401 414 6.939730 TGTTGCTATGACCTATGTCTTTGAAA 59.060 34.615 0.00 0.00 42.28 2.69
424 437 4.963318 TCACATCTTGAAGGAGAAGTGT 57.037 40.909 9.26 0.00 42.75 3.55
435 448 4.565022 TGTTTACGCAGATCACATCTTGA 58.435 39.130 0.00 0.00 37.58 3.02
439 452 5.234972 TGATCATGTTTACGCAGATCACATC 59.765 40.000 0.00 0.00 39.89 3.06
442 455 5.469373 TTGATCATGTTTACGCAGATCAC 57.531 39.130 0.00 0.00 43.20 3.06
447 460 7.043854 GGAAATCAATTGATCATGTTTACGCAG 60.044 37.037 20.95 0.00 32.75 5.18
464 477 8.152023 AGTCTAAGGTGAAGTAGGAAATCAAT 57.848 34.615 0.00 0.00 0.00 2.57
471 484 5.828871 AGCTTAGTCTAAGGTGAAGTAGGA 58.171 41.667 20.82 0.00 44.11 2.94
472 485 7.826918 ATAGCTTAGTCTAAGGTGAAGTAGG 57.173 40.000 27.18 0.32 45.23 3.18
499 512 5.921408 TGCAACGGGTACAAAATAAATGAAC 59.079 36.000 0.00 0.00 0.00 3.18
563 576 9.545105 TCTGATTGTTTTTATGCACTCAAAAAT 57.455 25.926 14.78 2.94 36.38 1.82
617 630 3.826729 GGAAAGGTAGACCAGCAAATTGT 59.173 43.478 0.66 0.00 38.89 2.71
697 711 0.165295 GTCGGGCTTTAAAGACACGC 59.835 55.000 22.43 14.93 35.04 5.34
731 750 4.544689 CAGAGACGGCGAGGCGAG 62.545 72.222 25.16 6.04 0.00 5.03
735 754 4.200283 GAGGCAGAGACGGCGAGG 62.200 72.222 16.62 0.00 36.37 4.63
739 758 2.757917 AGAGGAGGCAGAGACGGC 60.758 66.667 0.00 0.00 0.00 5.68
782 801 3.391382 GTACGGTGAGGGCCTGCT 61.391 66.667 12.95 0.00 0.00 4.24
929 958 0.173481 CCTCCGATTCTCTTGTCGCA 59.827 55.000 0.00 0.00 36.57 5.10
1550 1597 1.737735 TGCAGTCGTCGCAGATTGG 60.738 57.895 5.08 0.00 40.67 3.16
1735 1786 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
1736 1787 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
1808 1859 6.767524 TCTAAGCTCCAAAAGTCAACAAAA 57.232 33.333 0.00 0.00 0.00 2.44
1829 1880 3.008485 GGACCATCAAACTGAGACCTTCT 59.992 47.826 0.00 0.00 0.00 2.85
2019 2070 4.291249 AGAGTTCAACTTAGGCCCCATAAA 59.709 41.667 0.00 0.00 0.00 1.40
2094 2145 6.721318 ACAGGGAAGTATTGAGCAGAAATAA 58.279 36.000 0.00 0.00 0.00 1.40
2113 2164 1.134098 AGAACACCACACTCAACAGGG 60.134 52.381 0.00 0.00 0.00 4.45
2693 2744 1.129998 CTGAAGAATGCTGCCTTCGTG 59.870 52.381 10.34 4.02 41.10 4.35
2694 2745 1.002430 TCTGAAGAATGCTGCCTTCGT 59.998 47.619 11.18 8.63 41.10 3.85
2769 2820 7.344093 TGGGCATTTGTATTATTTCTGATTGGA 59.656 33.333 0.00 0.00 0.00 3.53
2907 2958 6.218019 GGTCAACAACTTATTGGTAAAACCC 58.782 40.000 0.00 0.00 40.42 4.11
2934 2985 2.514458 ATTGCTCGATTTCCCCTTGT 57.486 45.000 0.00 0.00 0.00 3.16
2967 3018 2.070654 AAAGCGAACTGGGCAAACCG 62.071 55.000 0.00 0.00 44.64 4.44
2993 3044 5.936956 AGAAGAAAACATTCTGCCTCAGTAG 59.063 40.000 0.00 0.00 35.70 2.57
3051 3102 6.655003 TCTTATTACCAAGAAACCTGCTCAAG 59.345 38.462 0.00 0.00 31.63 3.02
3330 3381 6.208599 CCCTTTCACTAATTAACCAGCAAAGA 59.791 38.462 9.60 0.00 0.00 2.52
3331 3382 6.389906 CCCTTTCACTAATTAACCAGCAAAG 58.610 40.000 0.00 0.00 0.00 2.77
3357 3408 8.598202 TGATCATGGGGATAATTTCATATTGG 57.402 34.615 0.00 0.00 36.00 3.16
3501 3552 1.757682 TTGCACAAACCGTTCCTTCT 58.242 45.000 0.00 0.00 0.00 2.85
3581 3632 5.559148 ACACCAGAAGAAAAGTGAGAGAT 57.441 39.130 0.00 0.00 34.33 2.75
3582 3633 6.672266 ATACACCAGAAGAAAAGTGAGAGA 57.328 37.500 0.00 0.00 34.33 3.10
3583 3634 7.736447 AAATACACCAGAAGAAAAGTGAGAG 57.264 36.000 0.00 0.00 34.33 3.20
3584 3635 8.519799 AAAAATACACCAGAAGAAAAGTGAGA 57.480 30.769 0.00 0.00 34.33 3.27
3585 3636 8.624776 AGAAAAATACACCAGAAGAAAAGTGAG 58.375 33.333 0.00 0.00 34.33 3.51
3648 5960 3.211865 AGAATGACCATATGTGCAGCAG 58.788 45.455 0.00 0.00 0.00 4.24
3698 6010 3.621558 GATTGGTTCCCTACTTCCCTTG 58.378 50.000 0.00 0.00 0.00 3.61
3806 6118 1.830477 TGCAAGTGGAACCAAAAGCTT 59.170 42.857 0.00 0.00 37.80 3.74
3839 6151 7.479980 TGAAGAAAAATCAAGATCAAACGTGT 58.520 30.769 0.00 0.00 0.00 4.49
3899 6211 2.896039 AGAGCCCTAAACAGACTCAGT 58.104 47.619 0.00 0.00 0.00 3.41
3914 6226 3.119065 GGGAGTACAAGTGAAGTAGAGCC 60.119 52.174 0.00 0.00 0.00 4.70
3931 6243 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
3933 6245 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
3962 6274 9.733219 GCGTTTAGATCACTACTTTAGTTATCT 57.267 33.333 12.46 12.46 46.18 1.98
3963 6275 9.733219 AGCGTTTAGATCACTACTTTAGTTATC 57.267 33.333 0.00 0.95 38.88 1.75
3964 6276 9.733219 GAGCGTTTAGATCACTACTTTAGTTAT 57.267 33.333 0.00 0.00 36.76 1.89
3965 6277 8.954350 AGAGCGTTTAGATCACTACTTTAGTTA 58.046 33.333 0.00 0.00 37.82 2.24
3966 6278 7.828712 AGAGCGTTTAGATCACTACTTTAGTT 58.171 34.615 0.00 0.00 37.82 2.24
3967 6279 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
3968 6280 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
3980 6292 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
3981 6293 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
3982 6294 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
3983 6295 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
3984 6296 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
3985 6297 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
3986 6298 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
3987 6299 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
3988 6300 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
3993 6305 9.986157 TGATATACTCCCTCCGTAAACTAATAT 57.014 33.333 0.00 0.00 0.00 1.28
3994 6306 9.458727 CTGATATACTCCCTCCGTAAACTAATA 57.541 37.037 0.00 0.00 0.00 0.98
3995 6307 7.949006 ACTGATATACTCCCTCCGTAAACTAAT 59.051 37.037 0.00 0.00 0.00 1.73
3996 6308 7.293073 ACTGATATACTCCCTCCGTAAACTAA 58.707 38.462 0.00 0.00 0.00 2.24
3997 6309 6.845908 ACTGATATACTCCCTCCGTAAACTA 58.154 40.000 0.00 0.00 0.00 2.24
3998 6310 5.703310 ACTGATATACTCCCTCCGTAAACT 58.297 41.667 0.00 0.00 0.00 2.66
3999 6311 7.700022 ATACTGATATACTCCCTCCGTAAAC 57.300 40.000 0.00 0.00 0.00 2.01
4000 6312 9.624373 GATATACTGATATACTCCCTCCGTAAA 57.376 37.037 0.00 0.00 0.00 2.01
4001 6313 9.000978 AGATATACTGATATACTCCCTCCGTAA 57.999 37.037 0.00 0.00 0.00 3.18
4002 6314 8.564364 AGATATACTGATATACTCCCTCCGTA 57.436 38.462 0.00 0.00 0.00 4.02
4003 6315 7.454553 AGATATACTGATATACTCCCTCCGT 57.545 40.000 0.00 0.00 0.00 4.69
4062 6374 5.556915 TCAGGTTTCAGGTTCATAATCGTT 58.443 37.500 0.00 0.00 0.00 3.85
4119 6431 3.173953 TCAGGACAGCCAAATGGATTT 57.826 42.857 2.98 0.00 37.39 2.17
4172 6484 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4173 6485 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4174 6486 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4175 6487 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4176 6488 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
4177 6489 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
4178 6490 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
4179 6491 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
4180 6492 2.660189 TCCGACAAGTATTTCCGGAC 57.340 50.000 1.83 0.00 43.47 4.79
4182 6494 5.560183 GCATTTATCCGACAAGTATTTCCGG 60.560 44.000 0.00 0.00 41.36 5.14
4183 6495 5.007234 TGCATTTATCCGACAAGTATTTCCG 59.993 40.000 0.00 0.00 0.00 4.30
4184 6496 6.371809 TGCATTTATCCGACAAGTATTTCC 57.628 37.500 0.00 0.00 0.00 3.13
4185 6497 9.944663 TTTATGCATTTATCCGACAAGTATTTC 57.055 29.630 3.54 0.00 0.00 2.17
4190 6502 8.514594 CCATATTTATGCATTTATCCGACAAGT 58.485 33.333 3.54 0.00 32.40 3.16
4191 6503 8.729756 TCCATATTTATGCATTTATCCGACAAG 58.270 33.333 3.54 0.00 32.40 3.16
4192 6504 8.628630 TCCATATTTATGCATTTATCCGACAA 57.371 30.769 3.54 0.00 32.40 3.18
4193 6505 8.676401 CATCCATATTTATGCATTTATCCGACA 58.324 33.333 3.54 0.00 32.40 4.35
4194 6506 8.677300 ACATCCATATTTATGCATTTATCCGAC 58.323 33.333 3.54 0.00 32.40 4.79
4195 6507 8.806429 ACATCCATATTTATGCATTTATCCGA 57.194 30.769 3.54 0.00 32.40 4.55
4231 6543 8.871125 AGGAATGGATGTATCTAGACGTATTTT 58.129 33.333 0.00 0.00 0.00 1.82
4232 6544 8.423906 AGGAATGGATGTATCTAGACGTATTT 57.576 34.615 0.00 0.00 0.00 1.40
4233 6545 7.122948 GGAGGAATGGATGTATCTAGACGTATT 59.877 40.741 0.00 0.00 0.00 1.89
4234 6546 6.603997 GGAGGAATGGATGTATCTAGACGTAT 59.396 42.308 0.00 0.00 0.00 3.06
4235 6547 5.944599 GGAGGAATGGATGTATCTAGACGTA 59.055 44.000 0.00 0.00 0.00 3.57
4236 6548 4.767928 GGAGGAATGGATGTATCTAGACGT 59.232 45.833 0.00 0.00 0.00 4.34
4237 6549 4.142578 CGGAGGAATGGATGTATCTAGACG 60.143 50.000 0.00 0.00 0.00 4.18
4238 6550 5.010933 TCGGAGGAATGGATGTATCTAGAC 58.989 45.833 0.00 0.00 0.00 2.59
4239 6551 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
4240 6552 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
4241 6553 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
4242 6554 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
4243 6555 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
4244 6556 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
4245 6557 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
4246 6558 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
4247 6559 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
4248 6560 5.368989 GAAATACTTGTCGGAGGAATGGAT 58.631 41.667 0.00 0.00 0.00 3.41
4249 6561 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
4250 6562 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
4251 6563 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
4252 6564 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
4253 6565 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
4254 6566 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
4255 6567 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
4256 6568 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
4257 6569 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
4258 6570 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
4259 6571 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4260 6572 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4261 6573 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4262 6574 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4263 6575 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4264 6576 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4265 6577 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4266 6578 1.397390 GCTCCCTCCGTCCGGAAATA 61.397 60.000 5.23 0.00 44.66 1.40
4267 6579 2.732619 GCTCCCTCCGTCCGGAAAT 61.733 63.158 5.23 0.00 44.66 2.17
4268 6580 3.387947 GCTCCCTCCGTCCGGAAA 61.388 66.667 5.23 0.00 44.66 3.13
4269 6581 4.689549 TGCTCCCTCCGTCCGGAA 62.690 66.667 5.23 0.00 44.66 4.30
4272 6584 3.382832 AAGTGCTCCCTCCGTCCG 61.383 66.667 0.00 0.00 0.00 4.79
4273 6585 2.266055 CAAGTGCTCCCTCCGTCC 59.734 66.667 0.00 0.00 0.00 4.79
4274 6586 1.255667 TACCAAGTGCTCCCTCCGTC 61.256 60.000 0.00 0.00 0.00 4.79
4275 6587 0.617820 ATACCAAGTGCTCCCTCCGT 60.618 55.000 0.00 0.00 0.00 4.69
4276 6588 0.541863 AATACCAAGTGCTCCCTCCG 59.458 55.000 0.00 0.00 0.00 4.63
4277 6589 1.282157 ACAATACCAAGTGCTCCCTCC 59.718 52.381 0.00 0.00 0.00 4.30
4278 6590 2.789409 ACAATACCAAGTGCTCCCTC 57.211 50.000 0.00 0.00 0.00 4.30
4279 6591 3.525800 AAACAATACCAAGTGCTCCCT 57.474 42.857 0.00 0.00 0.00 4.20
4280 6592 5.163550 GGATTAAACAATACCAAGTGCTCCC 60.164 44.000 0.00 0.00 0.00 4.30
4281 6593 5.448632 CGGATTAAACAATACCAAGTGCTCC 60.449 44.000 0.00 0.00 0.00 4.70
4282 6594 5.123344 ACGGATTAAACAATACCAAGTGCTC 59.877 40.000 0.00 0.00 0.00 4.26
4283 6595 5.007682 ACGGATTAAACAATACCAAGTGCT 58.992 37.500 0.00 0.00 0.00 4.40
4284 6596 5.305139 ACGGATTAAACAATACCAAGTGC 57.695 39.130 0.00 0.00 0.00 4.40
4285 6597 9.498307 GAATAACGGATTAAACAATACCAAGTG 57.502 33.333 0.00 0.00 0.00 3.16
4286 6598 8.680001 GGAATAACGGATTAAACAATACCAAGT 58.320 33.333 0.00 0.00 0.00 3.16
4837 7152 6.350612 CCTTTAGTGAGTTTCCTTCTCGAGAT 60.351 42.308 17.44 0.00 34.99 2.75
4842 7157 4.452795 GTGCCTTTAGTGAGTTTCCTTCTC 59.547 45.833 0.00 0.00 0.00 2.87
5424 7739 3.836562 ACACTGGGGTTAAATACTCGAGT 59.163 43.478 23.66 23.66 46.01 4.18
5464 7779 1.224075 CGATCATTGCTACAGCTGGG 58.776 55.000 19.93 11.52 42.66 4.45
5483 7798 0.536006 AAAGCTGTGCTGACTGGTCC 60.536 55.000 0.00 0.00 39.62 4.46
5787 8102 2.820059 CCCCTTCTTTGGCAACTTTC 57.180 50.000 0.00 0.00 37.61 2.62
5848 8163 5.635280 CACATACCCTCGTGCTTATCTTATG 59.365 44.000 0.00 0.00 0.00 1.90
5855 8170 1.133598 CGACACATACCCTCGTGCTTA 59.866 52.381 0.00 0.00 36.57 3.09
6096 8411 1.691163 CCAGGGTTTTTGGGTTCACCT 60.691 52.381 0.00 0.00 41.11 4.00
6396 8907 0.321653 CTACTCCACCAGTTGGCCAC 60.322 60.000 3.88 0.00 46.47 5.01
6412 8923 7.494625 TCACAGGCATACAACTTAATAAGCTAC 59.505 37.037 0.00 0.00 0.00 3.58
6413 8924 7.561251 TCACAGGCATACAACTTAATAAGCTA 58.439 34.615 0.00 0.00 0.00 3.32
6414 8925 6.414732 TCACAGGCATACAACTTAATAAGCT 58.585 36.000 0.00 0.00 0.00 3.74
6415 8926 6.677781 TCACAGGCATACAACTTAATAAGC 57.322 37.500 0.00 0.00 0.00 3.09
6416 8927 8.268850 ACTTCACAGGCATACAACTTAATAAG 57.731 34.615 0.00 0.00 0.00 1.73
6417 8928 8.100791 AGACTTCACAGGCATACAACTTAATAA 58.899 33.333 0.00 0.00 0.00 1.40
6418 8929 7.620880 AGACTTCACAGGCATACAACTTAATA 58.379 34.615 0.00 0.00 0.00 0.98
6419 8930 6.476378 AGACTTCACAGGCATACAACTTAAT 58.524 36.000 0.00 0.00 0.00 1.40
6420 8931 5.865085 AGACTTCACAGGCATACAACTTAA 58.135 37.500 0.00 0.00 0.00 1.85
6421 8932 5.483685 AGACTTCACAGGCATACAACTTA 57.516 39.130 0.00 0.00 0.00 2.24
6422 8933 4.357918 AGACTTCACAGGCATACAACTT 57.642 40.909 0.00 0.00 0.00 2.66
6426 8937 2.813754 GCAAAGACTTCACAGGCATACA 59.186 45.455 0.00 0.00 0.00 2.29
6432 8943 3.108144 CGTTTTGCAAAGACTTCACAGG 58.892 45.455 12.41 0.00 0.00 4.00
6461 8972 8.504005 CCGTCCAATCCATAATAAATTGAGTAC 58.496 37.037 0.00 0.00 33.22 2.73
6481 8992 4.895668 AAATTGGTTACTACTCCGTCCA 57.104 40.909 0.00 0.00 0.00 4.02
6495 9006 4.141551 GGACGGAGGGAGTAATAAATTGGT 60.142 45.833 0.00 0.00 0.00 3.67
6514 9025 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
6547 9058 8.410673 AAGATGACTTATACACGTAGATGGAT 57.589 34.615 0.00 0.00 34.28 3.41
6550 9061 8.784994 ACCTAAGATGACTTATACACGTAGATG 58.215 37.037 0.00 0.00 37.85 2.90
6552 9063 8.618677 CAACCTAAGATGACTTATACACGTAGA 58.381 37.037 0.00 0.00 37.85 2.59
6553 9064 8.404000 ACAACCTAAGATGACTTATACACGTAG 58.596 37.037 0.00 0.00 37.85 3.51
6554 9065 8.186163 CACAACCTAAGATGACTTATACACGTA 58.814 37.037 0.00 0.00 37.85 3.57
6555 9066 7.033791 CACAACCTAAGATGACTTATACACGT 58.966 38.462 0.00 0.00 37.85 4.49
6556 9067 6.019801 GCACAACCTAAGATGACTTATACACG 60.020 42.308 0.00 0.00 37.85 4.49
6557 9068 6.816640 TGCACAACCTAAGATGACTTATACAC 59.183 38.462 0.00 0.00 37.85 2.90
6558 9069 6.816640 GTGCACAACCTAAGATGACTTATACA 59.183 38.462 13.17 0.00 37.85 2.29
6559 9070 6.258068 GGTGCACAACCTAAGATGACTTATAC 59.742 42.308 20.43 0.00 46.55 1.47
6561 9072 5.186198 GGTGCACAACCTAAGATGACTTAT 58.814 41.667 20.43 0.00 46.55 1.73
6562 9073 4.575885 GGTGCACAACCTAAGATGACTTA 58.424 43.478 20.43 0.00 46.55 2.24
6563 9074 3.412386 GGTGCACAACCTAAGATGACTT 58.588 45.455 20.43 0.00 46.55 3.01
6564 9075 3.059352 GGTGCACAACCTAAGATGACT 57.941 47.619 20.43 0.00 46.55 3.41
6575 9086 0.389948 CCTCCGTCTAGGTGCACAAC 60.390 60.000 20.43 9.75 41.99 3.32
6576 9087 1.541310 CCCTCCGTCTAGGTGCACAA 61.541 60.000 20.43 4.96 41.99 3.33
6577 9088 1.982395 CCCTCCGTCTAGGTGCACA 60.982 63.158 20.43 0.00 41.99 4.57
6578 9089 1.668101 CTCCCTCCGTCTAGGTGCAC 61.668 65.000 8.80 8.80 41.99 4.57
6579 9090 1.379977 CTCCCTCCGTCTAGGTGCA 60.380 63.158 0.00 0.00 41.99 4.57
6580 9091 0.106819 TACTCCCTCCGTCTAGGTGC 60.107 60.000 0.00 0.00 41.99 5.01
6581 9092 1.212441 AGTACTCCCTCCGTCTAGGTG 59.788 57.143 0.00 0.00 41.99 4.00
6582 9093 1.594129 AGTACTCCCTCCGTCTAGGT 58.406 55.000 0.00 0.00 41.99 3.08
6583 9094 3.853355 TTAGTACTCCCTCCGTCTAGG 57.147 52.381 0.00 0.00 42.97 3.02
6615 9364 7.010160 TCCATCCCAAAATAAGTTTCTCAACT 58.990 34.615 0.00 0.00 45.89 3.16
6616 9365 7.227049 TCCATCCCAAAATAAGTTTCTCAAC 57.773 36.000 0.00 0.00 0.00 3.18
6623 9372 6.322931 ACTTTCCTCCATCCCAAAATAAGTT 58.677 36.000 0.00 0.00 0.00 2.66
6643 9392 9.453572 CATGTATATCATGTAAGCCCATACTTT 57.546 33.333 0.00 0.00 46.18 2.66
6673 11619 5.163723 ACGAGTTATCAACCAAAGCATCATG 60.164 40.000 0.00 0.00 0.00 3.07
6676 11622 4.631813 AGACGAGTTATCAACCAAAGCATC 59.368 41.667 0.00 0.00 0.00 3.91
6750 11696 5.310451 ACGCTGTTTATCTAAAGAAACCCA 58.690 37.500 0.00 0.00 36.07 4.51
6752 11698 6.313164 AGCTACGCTGTTTATCTAAAGAAACC 59.687 38.462 0.00 0.00 37.57 3.27
6753 11699 7.292129 AGCTACGCTGTTTATCTAAAGAAAC 57.708 36.000 0.00 0.00 37.57 2.78
6792 11740 8.781196 CCAGATCATTTATGTATCCTTGAACAG 58.219 37.037 0.00 0.00 0.00 3.16
6793 11741 8.493607 TCCAGATCATTTATGTATCCTTGAACA 58.506 33.333 0.00 0.00 0.00 3.18
6799 11747 6.521427 GCACCTCCAGATCATTTATGTATCCT 60.521 42.308 0.00 0.00 0.00 3.24
6822 11770 2.009051 CGTCATATGTGGCTTCTTGCA 58.991 47.619 1.90 0.00 45.15 4.08
6856 11804 3.811083 TCTACGGTCTTGGCTTCAAAAA 58.189 40.909 0.00 0.00 0.00 1.94
6857 11805 3.478857 TCTACGGTCTTGGCTTCAAAA 57.521 42.857 0.00 0.00 0.00 2.44
6858 11806 3.135994 GTTCTACGGTCTTGGCTTCAAA 58.864 45.455 0.00 0.00 0.00 2.69
6859 11807 2.103432 TGTTCTACGGTCTTGGCTTCAA 59.897 45.455 0.00 0.00 0.00 2.69
6860 11808 1.689813 TGTTCTACGGTCTTGGCTTCA 59.310 47.619 0.00 0.00 0.00 3.02
6861 11809 2.450609 TGTTCTACGGTCTTGGCTTC 57.549 50.000 0.00 0.00 0.00 3.86
6862 11810 2.922740 TTGTTCTACGGTCTTGGCTT 57.077 45.000 0.00 0.00 0.00 4.35
6863 11811 3.074412 CAATTGTTCTACGGTCTTGGCT 58.926 45.455 0.00 0.00 0.00 4.75
6864 11812 2.812011 ACAATTGTTCTACGGTCTTGGC 59.188 45.455 4.92 0.00 0.00 4.52
6877 11825 9.974980 ATGAAAATTTACCGTAGAACAATTGTT 57.025 25.926 23.49 23.49 41.64 2.83
6878 11826 9.974980 AATGAAAATTTACCGTAGAACAATTGT 57.025 25.926 4.92 4.92 0.00 2.71
6911 11859 9.672673 GGATTCAGGCTTTGTATATGTACATAT 57.327 33.333 27.09 27.09 40.35 1.78
6912 11860 8.655901 TGGATTCAGGCTTTGTATATGTACATA 58.344 33.333 17.65 17.65 40.35 2.29
6913 11861 7.517320 TGGATTCAGGCTTTGTATATGTACAT 58.483 34.615 13.93 13.93 40.35 2.29
6914 11862 6.894682 TGGATTCAGGCTTTGTATATGTACA 58.105 36.000 0.00 0.00 39.00 2.90
6915 11863 7.426929 CTGGATTCAGGCTTTGTATATGTAC 57.573 40.000 0.00 0.00 37.36 2.90
6930 11878 5.011090 TCAAGATTCGTACCTGGATTCAG 57.989 43.478 0.00 0.00 40.59 3.02
6931 11879 4.466370 ACTCAAGATTCGTACCTGGATTCA 59.534 41.667 0.00 0.00 0.00 2.57
6932 11880 4.806247 CACTCAAGATTCGTACCTGGATTC 59.194 45.833 0.00 0.00 0.00 2.52
6933 11881 4.759782 CACTCAAGATTCGTACCTGGATT 58.240 43.478 0.00 0.00 0.00 3.01
6934 11882 3.430929 GCACTCAAGATTCGTACCTGGAT 60.431 47.826 0.00 0.00 0.00 3.41
6935 11883 2.094182 GCACTCAAGATTCGTACCTGGA 60.094 50.000 0.00 0.00 0.00 3.86
6936 11884 2.271800 GCACTCAAGATTCGTACCTGG 58.728 52.381 0.00 0.00 0.00 4.45
6937 11885 2.093973 AGGCACTCAAGATTCGTACCTG 60.094 50.000 0.00 0.00 0.00 4.00
6938 11886 2.180276 AGGCACTCAAGATTCGTACCT 58.820 47.619 0.00 0.00 0.00 3.08
6939 11887 2.674796 AGGCACTCAAGATTCGTACC 57.325 50.000 0.00 0.00 0.00 3.34
6940 11888 5.460419 CAGATAAGGCACTCAAGATTCGTAC 59.540 44.000 0.00 0.00 38.49 3.67
6941 11889 5.592054 CAGATAAGGCACTCAAGATTCGTA 58.408 41.667 0.00 0.00 38.49 3.43
6942 11890 4.437239 CAGATAAGGCACTCAAGATTCGT 58.563 43.478 0.00 0.00 38.49 3.85
6943 11891 3.247173 GCAGATAAGGCACTCAAGATTCG 59.753 47.826 0.00 0.00 38.49 3.34
6944 11892 4.450053 AGCAGATAAGGCACTCAAGATTC 58.550 43.478 0.00 0.00 38.49 2.52
6945 11893 4.500499 AGCAGATAAGGCACTCAAGATT 57.500 40.909 0.00 0.00 38.49 2.40
6946 11894 4.500499 AAGCAGATAAGGCACTCAAGAT 57.500 40.909 0.00 0.00 38.49 2.40
6947 11895 3.988976 AAGCAGATAAGGCACTCAAGA 57.011 42.857 0.00 0.00 38.49 3.02
6948 11896 4.034975 GCTAAAGCAGATAAGGCACTCAAG 59.965 45.833 0.00 0.00 38.56 3.02
6949 11897 3.941483 GCTAAAGCAGATAAGGCACTCAA 59.059 43.478 0.00 0.00 38.56 3.02
6950 11898 3.198635 AGCTAAAGCAGATAAGGCACTCA 59.801 43.478 4.54 0.00 45.16 3.41
6951 11899 3.802866 AGCTAAAGCAGATAAGGCACTC 58.197 45.455 4.54 0.00 45.16 3.51
6952 11900 3.454082 AGAGCTAAAGCAGATAAGGCACT 59.546 43.478 4.54 0.00 45.16 4.40
6953 11901 3.802866 AGAGCTAAAGCAGATAAGGCAC 58.197 45.455 4.54 0.00 45.16 5.01
6954 11902 5.129485 ACTTAGAGCTAAAGCAGATAAGGCA 59.871 40.000 17.61 0.00 45.16 4.75
6955 11903 5.606505 ACTTAGAGCTAAAGCAGATAAGGC 58.393 41.667 17.61 0.00 45.16 4.35
6956 11904 7.496747 AGAACTTAGAGCTAAAGCAGATAAGG 58.503 38.462 17.61 6.99 45.16 2.69
6957 11905 8.940768 AAGAACTTAGAGCTAAAGCAGATAAG 57.059 34.615 4.54 10.85 45.16 1.73
6958 11906 8.754080 AGAAGAACTTAGAGCTAAAGCAGATAA 58.246 33.333 4.54 0.00 45.16 1.75
6959 11907 8.299990 AGAAGAACTTAGAGCTAAAGCAGATA 57.700 34.615 4.54 0.00 45.16 1.98
6960 11908 7.181569 AGAAGAACTTAGAGCTAAAGCAGAT 57.818 36.000 4.54 0.00 45.16 2.90
6961 11909 6.597832 AGAAGAACTTAGAGCTAAAGCAGA 57.402 37.500 4.54 0.00 45.16 4.26
6962 11910 7.665561 AAAGAAGAACTTAGAGCTAAAGCAG 57.334 36.000 4.54 0.00 39.82 4.24
6963 11911 7.520614 GCAAAAGAAGAACTTAGAGCTAAAGCA 60.521 37.037 4.54 0.00 39.82 3.91
6964 11912 6.799441 GCAAAAGAAGAACTTAGAGCTAAAGC 59.201 38.462 7.96 0.00 37.93 3.51
6965 11913 7.041098 TGGCAAAAGAAGAACTTAGAGCTAAAG 60.041 37.037 6.73 6.73 37.93 1.85
6966 11914 6.770785 TGGCAAAAGAAGAACTTAGAGCTAAA 59.229 34.615 0.00 0.00 37.93 1.85
6967 11915 6.296026 TGGCAAAAGAAGAACTTAGAGCTAA 58.704 36.000 0.00 0.00 37.93 3.09
6968 11916 5.865085 TGGCAAAAGAAGAACTTAGAGCTA 58.135 37.500 0.00 0.00 37.93 3.32
6969 11917 4.718961 TGGCAAAAGAAGAACTTAGAGCT 58.281 39.130 0.00 0.00 37.93 4.09
6970 11918 5.397326 CATGGCAAAAGAAGAACTTAGAGC 58.603 41.667 0.00 0.00 37.93 4.09
6971 11919 5.397326 GCATGGCAAAAGAAGAACTTAGAG 58.603 41.667 0.00 0.00 37.93 2.43
6972 11920 4.218417 GGCATGGCAAAAGAAGAACTTAGA 59.782 41.667 15.47 0.00 37.93 2.10
6973 11921 4.219288 AGGCATGGCAAAAGAAGAACTTAG 59.781 41.667 22.64 0.00 37.93 2.18
6974 11922 4.151883 AGGCATGGCAAAAGAAGAACTTA 58.848 39.130 22.64 0.00 37.93 2.24
6975 11923 2.967887 AGGCATGGCAAAAGAAGAACTT 59.032 40.909 22.64 0.00 40.98 2.66
6976 11924 2.601905 AGGCATGGCAAAAGAAGAACT 58.398 42.857 22.64 0.00 0.00 3.01
6977 11925 3.006217 AGAAGGCATGGCAAAAGAAGAAC 59.994 43.478 22.64 0.40 0.00 3.01
6978 11926 3.233507 AGAAGGCATGGCAAAAGAAGAA 58.766 40.909 22.64 0.00 0.00 2.52
6979 11927 2.880443 AGAAGGCATGGCAAAAGAAGA 58.120 42.857 22.64 0.00 0.00 2.87
6980 11928 3.672767 AAGAAGGCATGGCAAAAGAAG 57.327 42.857 22.64 0.00 0.00 2.85
6981 11929 3.387374 TGAAAGAAGGCATGGCAAAAGAA 59.613 39.130 22.64 0.00 0.00 2.52
6982 11930 2.964464 TGAAAGAAGGCATGGCAAAAGA 59.036 40.909 22.64 0.00 0.00 2.52
6983 11931 3.389925 TGAAAGAAGGCATGGCAAAAG 57.610 42.857 22.64 0.00 0.00 2.27
6984 11932 3.834489 TTGAAAGAAGGCATGGCAAAA 57.166 38.095 22.64 1.96 0.00 2.44
6985 11933 3.834489 TTTGAAAGAAGGCATGGCAAA 57.166 38.095 22.64 8.24 0.00 3.68
6986 11934 4.771577 TCTATTTGAAAGAAGGCATGGCAA 59.228 37.500 22.64 4.40 0.00 4.52
6987 11935 4.343231 TCTATTTGAAAGAAGGCATGGCA 58.657 39.130 22.64 0.00 0.00 4.92
6988 11936 4.989279 TCTATTTGAAAGAAGGCATGGC 57.011 40.909 12.14 12.14 0.00 4.40
6989 11937 6.521151 AGTTCTATTTGAAAGAAGGCATGG 57.479 37.500 0.00 0.00 36.30 3.66
6990 11938 7.031975 GGAAGTTCTATTTGAAAGAAGGCATG 58.968 38.462 2.25 0.00 36.30 4.06
6991 11939 6.721208 TGGAAGTTCTATTTGAAAGAAGGCAT 59.279 34.615 2.25 0.00 36.30 4.40
6992 11940 6.068010 TGGAAGTTCTATTTGAAAGAAGGCA 58.932 36.000 2.25 0.00 36.30 4.75
6993 11941 6.349694 CCTGGAAGTTCTATTTGAAAGAAGGC 60.350 42.308 2.25 0.00 36.30 4.35
6994 11942 6.717084 ACCTGGAAGTTCTATTTGAAAGAAGG 59.283 38.462 0.00 0.00 36.30 3.46
6995 11943 7.751768 ACCTGGAAGTTCTATTTGAAAGAAG 57.248 36.000 0.00 0.00 36.30 2.85
6996 11944 9.449719 GATACCTGGAAGTTCTATTTGAAAGAA 57.550 33.333 0.00 0.00 36.30 2.52
6997 11945 8.602424 TGATACCTGGAAGTTCTATTTGAAAGA 58.398 33.333 0.00 0.00 36.30 2.52
6998 11946 8.792830 TGATACCTGGAAGTTCTATTTGAAAG 57.207 34.615 0.00 0.00 36.30 2.62
6999 11947 9.753674 ATTGATACCTGGAAGTTCTATTTGAAA 57.246 29.630 0.00 0.00 36.30 2.69
7000 11948 9.396022 GATTGATACCTGGAAGTTCTATTTGAA 57.604 33.333 0.00 0.00 0.00 2.69
7001 11949 7.710907 CGATTGATACCTGGAAGTTCTATTTGA 59.289 37.037 0.00 0.00 0.00 2.69
7002 11950 7.495934 ACGATTGATACCTGGAAGTTCTATTTG 59.504 37.037 0.00 0.00 0.00 2.32
7003 11951 7.565680 ACGATTGATACCTGGAAGTTCTATTT 58.434 34.615 0.00 0.00 0.00 1.40
7004 11952 7.125792 ACGATTGATACCTGGAAGTTCTATT 57.874 36.000 0.00 0.00 0.00 1.73
7005 11953 6.732896 ACGATTGATACCTGGAAGTTCTAT 57.267 37.500 0.00 0.00 0.00 1.98
7006 11954 6.338146 CAACGATTGATACCTGGAAGTTCTA 58.662 40.000 0.00 0.00 0.00 2.10
7007 11955 5.178797 CAACGATTGATACCTGGAAGTTCT 58.821 41.667 0.00 0.00 0.00 3.01
7008 11956 4.332819 CCAACGATTGATACCTGGAAGTTC 59.667 45.833 0.00 0.00 0.00 3.01
7009 11957 4.019681 TCCAACGATTGATACCTGGAAGTT 60.020 41.667 0.00 0.00 30.12 2.66
7010 11958 3.517901 TCCAACGATTGATACCTGGAAGT 59.482 43.478 0.00 0.00 30.12 3.01
7011 11959 4.122776 CTCCAACGATTGATACCTGGAAG 58.877 47.826 0.00 0.00 32.74 3.46
7012 11960 3.517901 ACTCCAACGATTGATACCTGGAA 59.482 43.478 0.00 0.00 32.74 3.53
7013 11961 3.104512 ACTCCAACGATTGATACCTGGA 58.895 45.455 0.00 0.00 0.00 3.86
7014 11962 3.543680 ACTCCAACGATTGATACCTGG 57.456 47.619 0.00 0.00 0.00 4.45
7015 11963 4.051922 GCTACTCCAACGATTGATACCTG 58.948 47.826 0.00 0.00 0.00 4.00
7016 11964 3.961408 AGCTACTCCAACGATTGATACCT 59.039 43.478 0.00 0.00 0.00 3.08
7017 11965 4.038162 AGAGCTACTCCAACGATTGATACC 59.962 45.833 0.00 0.00 0.00 2.73
7018 11966 5.189659 AGAGCTACTCCAACGATTGATAC 57.810 43.478 0.00 0.00 0.00 2.24
7019 11967 5.594725 AGAAGAGCTACTCCAACGATTGATA 59.405 40.000 0.00 0.00 0.00 2.15
7020 11968 4.404073 AGAAGAGCTACTCCAACGATTGAT 59.596 41.667 0.00 0.00 0.00 2.57
7021 11969 3.764434 AGAAGAGCTACTCCAACGATTGA 59.236 43.478 0.00 0.00 0.00 2.57
7022 11970 3.862267 CAGAAGAGCTACTCCAACGATTG 59.138 47.826 0.00 0.00 0.00 2.67
7023 11971 3.764434 TCAGAAGAGCTACTCCAACGATT 59.236 43.478 0.00 0.00 0.00 3.34
7024 11972 3.357203 TCAGAAGAGCTACTCCAACGAT 58.643 45.455 0.00 0.00 0.00 3.73
7025 11973 2.791655 TCAGAAGAGCTACTCCAACGA 58.208 47.619 0.00 0.00 0.00 3.85
7026 11974 3.191581 TCTTCAGAAGAGCTACTCCAACG 59.808 47.826 8.95 0.00 32.71 4.10
7027 11975 4.792521 TCTTCAGAAGAGCTACTCCAAC 57.207 45.455 8.95 0.00 32.71 3.77
7028 11976 5.590530 GATCTTCAGAAGAGCTACTCCAA 57.409 43.478 19.37 0.00 40.64 3.53
7036 11984 8.389603 CAGAAATTACAAGATCTTCAGAAGAGC 58.610 37.037 19.08 19.08 44.03 4.09
7037 11985 8.389603 GCAGAAATTACAAGATCTTCAGAAGAG 58.610 37.037 17.91 7.23 41.61 2.85
7038 11986 8.099537 AGCAGAAATTACAAGATCTTCAGAAGA 58.900 33.333 15.44 15.44 42.69 2.87
7039 11987 8.266392 AGCAGAAATTACAAGATCTTCAGAAG 57.734 34.615 4.57 3.45 0.00 2.85
7040 11988 7.879677 TGAGCAGAAATTACAAGATCTTCAGAA 59.120 33.333 4.57 0.34 0.00 3.02
7041 11989 7.389232 TGAGCAGAAATTACAAGATCTTCAGA 58.611 34.615 4.57 0.00 0.00 3.27
7042 11990 7.606858 TGAGCAGAAATTACAAGATCTTCAG 57.393 36.000 4.57 0.00 0.00 3.02
7043 11991 7.281774 GGATGAGCAGAAATTACAAGATCTTCA 59.718 37.037 4.57 0.00 0.00 3.02
7044 11992 7.281774 TGGATGAGCAGAAATTACAAGATCTTC 59.718 37.037 4.57 0.00 0.00 2.87
7045 11993 7.114754 TGGATGAGCAGAAATTACAAGATCTT 58.885 34.615 0.88 0.88 0.00 2.40
7046 11994 6.656902 TGGATGAGCAGAAATTACAAGATCT 58.343 36.000 0.00 0.00 0.00 2.75
7047 11995 6.932356 TGGATGAGCAGAAATTACAAGATC 57.068 37.500 0.00 0.00 0.00 2.75
7048 11996 7.707624 TTTGGATGAGCAGAAATTACAAGAT 57.292 32.000 0.00 0.00 0.00 2.40
7049 11997 7.707624 ATTTGGATGAGCAGAAATTACAAGA 57.292 32.000 0.00 0.00 0.00 3.02
7050 11998 8.680903 AGTATTTGGATGAGCAGAAATTACAAG 58.319 33.333 0.00 0.00 0.00 3.16
7051 11999 8.579850 AGTATTTGGATGAGCAGAAATTACAA 57.420 30.769 0.00 0.00 0.00 2.41
7052 12000 7.283127 GGAGTATTTGGATGAGCAGAAATTACA 59.717 37.037 0.00 0.00 0.00 2.41
7053 12001 7.283127 TGGAGTATTTGGATGAGCAGAAATTAC 59.717 37.037 0.00 0.00 0.00 1.89
7054 12002 7.345691 TGGAGTATTTGGATGAGCAGAAATTA 58.654 34.615 0.00 0.00 0.00 1.40
7055 12003 6.189859 TGGAGTATTTGGATGAGCAGAAATT 58.810 36.000 0.00 0.00 0.00 1.82
7056 12004 5.759059 TGGAGTATTTGGATGAGCAGAAAT 58.241 37.500 0.00 0.00 0.00 2.17
7057 12005 5.178096 TGGAGTATTTGGATGAGCAGAAA 57.822 39.130 0.00 0.00 0.00 2.52
7058 12006 4.774124 CTGGAGTATTTGGATGAGCAGAA 58.226 43.478 0.00 0.00 0.00 3.02
7059 12007 3.432749 GCTGGAGTATTTGGATGAGCAGA 60.433 47.826 0.00 0.00 0.00 4.26
7060 12008 2.877168 GCTGGAGTATTTGGATGAGCAG 59.123 50.000 0.00 0.00 0.00 4.24
7061 12009 2.239402 TGCTGGAGTATTTGGATGAGCA 59.761 45.455 0.00 0.00 32.96 4.26
7062 12010 2.923121 TGCTGGAGTATTTGGATGAGC 58.077 47.619 0.00 0.00 0.00 4.26
7063 12011 4.070716 GGATGCTGGAGTATTTGGATGAG 58.929 47.826 0.00 0.00 0.00 2.90
7064 12012 3.181440 GGGATGCTGGAGTATTTGGATGA 60.181 47.826 0.00 0.00 0.00 2.92
7065 12013 3.152341 GGGATGCTGGAGTATTTGGATG 58.848 50.000 0.00 0.00 0.00 3.51
7066 12014 2.785269 TGGGATGCTGGAGTATTTGGAT 59.215 45.455 0.00 0.00 0.00 3.41
7067 12015 2.204463 TGGGATGCTGGAGTATTTGGA 58.796 47.619 0.00 0.00 0.00 3.53
7068 12016 2.734755 TGGGATGCTGGAGTATTTGG 57.265 50.000 0.00 0.00 0.00 3.28
7069 12017 3.824133 TGATGGGATGCTGGAGTATTTG 58.176 45.455 0.00 0.00 0.00 2.32
7070 12018 4.105217 TCATGATGGGATGCTGGAGTATTT 59.895 41.667 0.00 0.00 0.00 1.40
7071 12019 3.654321 TCATGATGGGATGCTGGAGTATT 59.346 43.478 0.00 0.00 0.00 1.89
7072 12020 3.254089 TCATGATGGGATGCTGGAGTAT 58.746 45.455 0.00 0.00 0.00 2.12
7073 12021 2.693210 TCATGATGGGATGCTGGAGTA 58.307 47.619 0.00 0.00 0.00 2.59
7074 12022 1.514983 TCATGATGGGATGCTGGAGT 58.485 50.000 0.00 0.00 0.00 3.85
7075 12023 2.039879 TGATCATGATGGGATGCTGGAG 59.960 50.000 14.30 0.00 0.00 3.86
7076 12024 2.059490 TGATCATGATGGGATGCTGGA 58.941 47.619 14.30 0.00 0.00 3.86
7077 12025 2.579410 TGATCATGATGGGATGCTGG 57.421 50.000 14.30 0.00 0.00 4.85
7078 12026 3.421844 ACATGATCATGATGGGATGCTG 58.578 45.455 36.37 12.21 41.20 4.41
7079 12027 3.561528 GGACATGATCATGATGGGATGCT 60.562 47.826 36.37 14.94 41.20 3.79
7080 12028 2.753452 GGACATGATCATGATGGGATGC 59.247 50.000 36.37 17.85 41.20 3.91
7081 12029 4.028993 TGGACATGATCATGATGGGATG 57.971 45.455 36.37 14.13 41.20 3.51
7082 12030 4.948062 ATGGACATGATCATGATGGGAT 57.052 40.909 36.37 17.04 41.20 3.85
7083 12031 4.324022 GCTATGGACATGATCATGATGGGA 60.324 45.833 36.37 19.22 41.20 4.37
7084 12032 3.945921 GCTATGGACATGATCATGATGGG 59.054 47.826 36.37 21.68 41.20 4.00
7085 12033 4.585879 TGCTATGGACATGATCATGATGG 58.414 43.478 36.37 23.25 41.20 3.51
7086 12034 6.569179 TTTGCTATGGACATGATCATGATG 57.431 37.500 36.37 17.00 41.20 3.07
7087 12035 7.670140 AGAATTTGCTATGGACATGATCATGAT 59.330 33.333 36.37 23.38 41.20 2.45
7088 12036 7.002276 AGAATTTGCTATGGACATGATCATGA 58.998 34.615 36.37 18.65 41.20 3.07
7089 12037 7.084486 CAGAATTTGCTATGGACATGATCATG 58.916 38.462 29.95 29.95 44.15 3.07
7090 12038 6.208797 CCAGAATTTGCTATGGACATGATCAT 59.791 38.462 1.18 1.18 34.60 2.45
7091 12039 5.533528 CCAGAATTTGCTATGGACATGATCA 59.466 40.000 0.00 0.00 34.60 2.92
7092 12040 5.533903 ACCAGAATTTGCTATGGACATGATC 59.466 40.000 0.00 0.00 36.62 2.92
7093 12041 5.301045 CACCAGAATTTGCTATGGACATGAT 59.699 40.000 0.00 0.00 36.62 2.45
7094 12042 4.641541 CACCAGAATTTGCTATGGACATGA 59.358 41.667 0.00 0.00 36.62 3.07
7095 12043 4.202080 CCACCAGAATTTGCTATGGACATG 60.202 45.833 0.00 0.00 36.62 3.21
7096 12044 3.956199 CCACCAGAATTTGCTATGGACAT 59.044 43.478 0.00 0.00 36.62 3.06
7097 12045 3.355378 CCACCAGAATTTGCTATGGACA 58.645 45.455 0.00 0.00 36.62 4.02
7098 12046 2.689983 CCCACCAGAATTTGCTATGGAC 59.310 50.000 0.00 0.00 36.62 4.02
7099 12047 2.580322 TCCCACCAGAATTTGCTATGGA 59.420 45.455 0.00 0.00 36.62 3.41
7100 12048 2.954318 CTCCCACCAGAATTTGCTATGG 59.046 50.000 0.00 0.00 38.83 2.74
7101 12049 3.379372 CACTCCCACCAGAATTTGCTATG 59.621 47.826 0.00 0.00 0.00 2.23
7102 12050 3.010584 ACACTCCCACCAGAATTTGCTAT 59.989 43.478 0.00 0.00 0.00 2.97
7103 12051 2.375174 ACACTCCCACCAGAATTTGCTA 59.625 45.455 0.00 0.00 0.00 3.49
7104 12052 1.145738 ACACTCCCACCAGAATTTGCT 59.854 47.619 0.00 0.00 0.00 3.91
7105 12053 1.620822 ACACTCCCACCAGAATTTGC 58.379 50.000 0.00 0.00 0.00 3.68
7106 12054 2.749621 GCTACACTCCCACCAGAATTTG 59.250 50.000 0.00 0.00 0.00 2.32
7107 12055 2.644798 AGCTACACTCCCACCAGAATTT 59.355 45.455 0.00 0.00 0.00 1.82
7108 12056 2.269940 AGCTACACTCCCACCAGAATT 58.730 47.619 0.00 0.00 0.00 2.17
7109 12057 1.958288 AGCTACACTCCCACCAGAAT 58.042 50.000 0.00 0.00 0.00 2.40
7110 12058 2.042569 TCTAGCTACACTCCCACCAGAA 59.957 50.000 0.00 0.00 0.00 3.02
7111 12059 1.639108 TCTAGCTACACTCCCACCAGA 59.361 52.381 0.00 0.00 0.00 3.86
7112 12060 1.751924 GTCTAGCTACACTCCCACCAG 59.248 57.143 0.00 0.00 0.00 4.00
7113 12061 1.358103 AGTCTAGCTACACTCCCACCA 59.642 52.381 0.00 0.00 0.00 4.17
7114 12062 1.751924 CAGTCTAGCTACACTCCCACC 59.248 57.143 0.00 0.00 0.00 4.61
7115 12063 2.424246 GTCAGTCTAGCTACACTCCCAC 59.576 54.545 0.00 0.00 0.00 4.61
7116 12064 2.041216 TGTCAGTCTAGCTACACTCCCA 59.959 50.000 0.00 0.00 0.00 4.37
7117 12065 2.724454 TGTCAGTCTAGCTACACTCCC 58.276 52.381 0.00 0.00 0.00 4.30
7118 12066 4.381079 CCTTTGTCAGTCTAGCTACACTCC 60.381 50.000 0.00 0.00 0.00 3.85
7119 12067 4.218852 ACCTTTGTCAGTCTAGCTACACTC 59.781 45.833 0.00 0.00 0.00 3.51
7120 12068 4.153411 ACCTTTGTCAGTCTAGCTACACT 58.847 43.478 0.00 0.00 0.00 3.55
7121 12069 4.218852 AGACCTTTGTCAGTCTAGCTACAC 59.781 45.833 0.00 0.00 44.33 2.90
7122 12070 4.218635 CAGACCTTTGTCAGTCTAGCTACA 59.781 45.833 0.00 0.00 44.33 2.74
7123 12071 4.218852 ACAGACCTTTGTCAGTCTAGCTAC 59.781 45.833 0.00 0.00 44.33 3.58
7124 12072 4.218635 CACAGACCTTTGTCAGTCTAGCTA 59.781 45.833 0.00 0.00 44.33 3.32
7125 12073 3.006323 CACAGACCTTTGTCAGTCTAGCT 59.994 47.826 0.00 0.00 44.33 3.32
7126 12074 3.005897 TCACAGACCTTTGTCAGTCTAGC 59.994 47.826 0.00 0.00 44.33 3.42
7127 12075 4.855715 TCACAGACCTTTGTCAGTCTAG 57.144 45.455 0.00 0.00 44.33 2.43
7128 12076 4.039245 CCTTCACAGACCTTTGTCAGTCTA 59.961 45.833 0.00 0.00 44.33 2.59
7129 12077 3.181461 CCTTCACAGACCTTTGTCAGTCT 60.181 47.826 0.00 0.00 44.33 3.24
7130 12078 3.134458 CCTTCACAGACCTTTGTCAGTC 58.866 50.000 0.00 0.00 44.33 3.51
7131 12079 2.771943 TCCTTCACAGACCTTTGTCAGT 59.228 45.455 0.00 0.00 44.33 3.41
7132 12080 3.070159 TCTCCTTCACAGACCTTTGTCAG 59.930 47.826 0.00 0.00 44.33 3.51
7133 12081 3.038280 TCTCCTTCACAGACCTTTGTCA 58.962 45.455 0.00 0.00 44.33 3.58
7134 12082 3.753294 TCTCCTTCACAGACCTTTGTC 57.247 47.619 0.00 0.00 42.09 3.18
7135 12083 3.648067 TCATCTCCTTCACAGACCTTTGT 59.352 43.478 0.00 0.00 0.00 2.83
7136 12084 3.999663 GTCATCTCCTTCACAGACCTTTG 59.000 47.826 0.00 0.00 0.00 2.77
7137 12085 3.906846 AGTCATCTCCTTCACAGACCTTT 59.093 43.478 0.00 0.00 0.00 3.11
7138 12086 3.515562 AGTCATCTCCTTCACAGACCTT 58.484 45.455 0.00 0.00 0.00 3.50
7139 12087 3.182887 AGTCATCTCCTTCACAGACCT 57.817 47.619 0.00 0.00 0.00 3.85
7140 12088 5.606348 ATTAGTCATCTCCTTCACAGACC 57.394 43.478 0.00 0.00 0.00 3.85
7141 12089 7.865385 GTGATATTAGTCATCTCCTTCACAGAC 59.135 40.741 0.00 0.00 33.08 3.51
7142 12090 7.782168 AGTGATATTAGTCATCTCCTTCACAGA 59.218 37.037 0.00 0.00 34.79 3.41
7143 12091 7.950512 AGTGATATTAGTCATCTCCTTCACAG 58.049 38.462 0.00 0.00 34.79 3.66
7144 12092 7.904558 AGTGATATTAGTCATCTCCTTCACA 57.095 36.000 0.00 0.00 34.79 3.58
7145 12093 8.026607 GCTAGTGATATTAGTCATCTCCTTCAC 58.973 40.741 0.00 0.00 33.03 3.18
7146 12094 7.177568 GGCTAGTGATATTAGTCATCTCCTTCA 59.822 40.741 0.00 0.00 0.00 3.02
7147 12095 7.396055 AGGCTAGTGATATTAGTCATCTCCTTC 59.604 40.741 0.00 0.00 0.00 3.46
7148 12096 7.245292 AGGCTAGTGATATTAGTCATCTCCTT 58.755 38.462 0.00 0.00 0.00 3.36
7149 12097 6.799827 AGGCTAGTGATATTAGTCATCTCCT 58.200 40.000 0.00 0.00 0.00 3.69
7150 12098 6.183360 CGAGGCTAGTGATATTAGTCATCTCC 60.183 46.154 0.00 0.00 0.00 3.71
7151 12099 6.596106 TCGAGGCTAGTGATATTAGTCATCTC 59.404 42.308 0.00 0.00 0.00 2.75
7152 12100 6.477253 TCGAGGCTAGTGATATTAGTCATCT 58.523 40.000 0.00 0.00 0.00 2.90
7153 12101 6.676943 GCTCGAGGCTAGTGATATTAGTCATC 60.677 46.154 15.58 0.00 38.06 2.92
7154 12102 5.124776 GCTCGAGGCTAGTGATATTAGTCAT 59.875 44.000 15.58 0.00 38.06 3.06
7155 12103 4.456222 GCTCGAGGCTAGTGATATTAGTCA 59.544 45.833 15.58 0.00 38.06 3.41
7156 12104 4.456222 TGCTCGAGGCTAGTGATATTAGTC 59.544 45.833 15.58 0.00 42.39 2.59
7157 12105 4.216687 GTGCTCGAGGCTAGTGATATTAGT 59.783 45.833 15.58 0.00 42.39 2.24
7158 12106 4.380023 GGTGCTCGAGGCTAGTGATATTAG 60.380 50.000 15.58 0.00 42.39 1.73
7159 12107 3.506455 GGTGCTCGAGGCTAGTGATATTA 59.494 47.826 15.58 0.00 42.39 0.98
7160 12108 2.297597 GGTGCTCGAGGCTAGTGATATT 59.702 50.000 15.58 0.00 42.39 1.28
7161 12109 1.889829 GGTGCTCGAGGCTAGTGATAT 59.110 52.381 15.58 0.00 42.39 1.63
7162 12110 1.133761 AGGTGCTCGAGGCTAGTGATA 60.134 52.381 15.58 0.00 42.39 2.15
7163 12111 0.396417 AGGTGCTCGAGGCTAGTGAT 60.396 55.000 15.58 0.00 42.39 3.06
7164 12112 1.000771 AGGTGCTCGAGGCTAGTGA 60.001 57.895 15.58 0.00 42.39 3.41
7165 12113 1.435515 GAGGTGCTCGAGGCTAGTG 59.564 63.158 15.58 0.00 42.39 2.74
7166 12114 1.755008 GGAGGTGCTCGAGGCTAGT 60.755 63.158 15.58 0.00 42.39 2.57
7167 12115 1.454847 AGGAGGTGCTCGAGGCTAG 60.455 63.158 15.58 0.00 42.39 3.42
7168 12116 1.754621 CAGGAGGTGCTCGAGGCTA 60.755 63.158 15.58 0.00 42.39 3.93
7169 12117 3.073735 CAGGAGGTGCTCGAGGCT 61.074 66.667 15.58 0.00 42.39 4.58
7178 12126 4.334759 CAGAGTATTTCATTGCAGGAGGTG 59.665 45.833 0.00 0.00 0.00 4.00
7179 12127 4.225942 TCAGAGTATTTCATTGCAGGAGGT 59.774 41.667 0.00 0.00 0.00 3.85
7180 12128 4.574013 GTCAGAGTATTTCATTGCAGGAGG 59.426 45.833 0.00 0.00 0.00 4.30
7181 12129 5.293814 CAGTCAGAGTATTTCATTGCAGGAG 59.706 44.000 0.00 0.00 0.00 3.69
7182 12130 5.181009 CAGTCAGAGTATTTCATTGCAGGA 58.819 41.667 0.00 0.00 0.00 3.86
7183 12131 4.940046 ACAGTCAGAGTATTTCATTGCAGG 59.060 41.667 0.00 0.00 0.00 4.85
7184 12132 6.492007 AACAGTCAGAGTATTTCATTGCAG 57.508 37.500 0.00 0.00 0.00 4.41
7185 12133 6.092670 GCTAACAGTCAGAGTATTTCATTGCA 59.907 38.462 0.00 0.00 0.00 4.08
7186 12134 6.092670 TGCTAACAGTCAGAGTATTTCATTGC 59.907 38.462 0.00 0.00 0.00 3.56
7187 12135 7.601073 TGCTAACAGTCAGAGTATTTCATTG 57.399 36.000 0.00 0.00 0.00 2.82
7188 12136 8.621532 TTTGCTAACAGTCAGAGTATTTCATT 57.378 30.769 0.00 0.00 0.00 2.57
7189 12137 8.671921 CATTTGCTAACAGTCAGAGTATTTCAT 58.328 33.333 0.00 0.00 0.00 2.57
7190 12138 7.877612 TCATTTGCTAACAGTCAGAGTATTTCA 59.122 33.333 0.00 0.00 0.00 2.69
7191 12139 8.256611 TCATTTGCTAACAGTCAGAGTATTTC 57.743 34.615 0.00 0.00 0.00 2.17
7192 12140 7.880195 ACTCATTTGCTAACAGTCAGAGTATTT 59.120 33.333 0.00 0.00 32.58 1.40
7193 12141 7.390027 ACTCATTTGCTAACAGTCAGAGTATT 58.610 34.615 0.00 0.00 32.58 1.89
7194 12142 6.940739 ACTCATTTGCTAACAGTCAGAGTAT 58.059 36.000 0.00 0.00 32.58 2.12
7195 12143 6.346477 ACTCATTTGCTAACAGTCAGAGTA 57.654 37.500 0.00 0.00 32.58 2.59
7196 12144 5.220710 ACTCATTTGCTAACAGTCAGAGT 57.779 39.130 0.00 0.00 0.00 3.24
7197 12145 5.698089 TGAACTCATTTGCTAACAGTCAGAG 59.302 40.000 0.00 0.00 0.00 3.35
7198 12146 5.610398 TGAACTCATTTGCTAACAGTCAGA 58.390 37.500 0.00 0.00 0.00 3.27
7199 12147 5.468072 ACTGAACTCATTTGCTAACAGTCAG 59.532 40.000 0.00 13.23 33.06 3.51
7200 12148 5.368145 ACTGAACTCATTTGCTAACAGTCA 58.632 37.500 0.00 0.00 33.06 3.41
7201 12149 5.931441 ACTGAACTCATTTGCTAACAGTC 57.069 39.130 0.00 0.00 33.06 3.51
7202 12150 5.590259 ACAACTGAACTCATTTGCTAACAGT 59.410 36.000 9.09 0.00 39.29 3.55
7203 12151 5.911280 CACAACTGAACTCATTTGCTAACAG 59.089 40.000 9.09 0.00 39.29 3.16
7204 12152 5.221028 CCACAACTGAACTCATTTGCTAACA 60.221 40.000 9.09 0.00 39.29 2.41
7205 12153 5.215160 CCACAACTGAACTCATTTGCTAAC 58.785 41.667 9.09 0.00 39.29 2.34
7206 12154 4.278170 CCCACAACTGAACTCATTTGCTAA 59.722 41.667 9.09 0.00 39.29 3.09
7207 12155 3.820467 CCCACAACTGAACTCATTTGCTA 59.180 43.478 9.09 0.00 39.29 3.49
7208 12156 2.624838 CCCACAACTGAACTCATTTGCT 59.375 45.455 9.09 0.00 39.29 3.91
7209 12157 2.362077 ACCCACAACTGAACTCATTTGC 59.638 45.455 9.09 0.00 39.29 3.68
7210 12158 5.964958 ATACCCACAACTGAACTCATTTG 57.035 39.130 7.92 7.92 40.82 2.32
7211 12159 6.976934 AAATACCCACAACTGAACTCATTT 57.023 33.333 0.00 0.00 0.00 2.32
7212 12160 6.976934 AAAATACCCACAACTGAACTCATT 57.023 33.333 0.00 0.00 0.00 2.57
7213 12161 6.738453 GCAAAAATACCCACAACTGAACTCAT 60.738 38.462 0.00 0.00 0.00 2.90
7214 12162 5.451242 GCAAAAATACCCACAACTGAACTCA 60.451 40.000 0.00 0.00 0.00 3.41
7215 12163 4.982295 GCAAAAATACCCACAACTGAACTC 59.018 41.667 0.00 0.00 0.00 3.01
7216 12164 4.649218 AGCAAAAATACCCACAACTGAACT 59.351 37.500 0.00 0.00 0.00 3.01
7217 12165 4.744631 CAGCAAAAATACCCACAACTGAAC 59.255 41.667 0.00 0.00 0.00 3.18
7218 12166 4.646945 TCAGCAAAAATACCCACAACTGAA 59.353 37.500 0.00 0.00 0.00 3.02
7219 12167 4.211125 TCAGCAAAAATACCCACAACTGA 58.789 39.130 0.00 0.00 0.00 3.41
7220 12168 4.582701 TCAGCAAAAATACCCACAACTG 57.417 40.909 0.00 0.00 0.00 3.16
7221 12169 5.200368 CTTCAGCAAAAATACCCACAACT 57.800 39.130 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.