Multiple sequence alignment - TraesCS4B01G149500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G149500 chr4B 100.000 5690 0 0 1 5690 222564059 222558370 0.000000e+00 10508.0
1 TraesCS4B01G149500 chr4B 99.763 2957 7 0 2734 5690 222546017 222543061 0.000000e+00 5422.0
2 TraesCS4B01G149500 chr4B 94.444 144 6 2 5547 5688 212540411 212540554 2.670000e-53 220.0
3 TraesCS4B01G149500 chr4B 93.793 145 8 1 5547 5690 35151339 35151195 3.450000e-52 217.0
4 TraesCS4B01G149500 chr4B 93.750 144 8 1 5548 5690 35061182 35061039 1.240000e-51 215.0
5 TraesCS4B01G149500 chr4B 93.151 146 8 2 5546 5690 220096198 220096054 4.470000e-51 213.0
6 TraesCS4B01G149500 chr4B 93.056 144 9 1 5547 5690 220200302 220200160 5.780000e-50 209.0
7 TraesCS4B01G149500 chr4B 92.466 146 10 1 5546 5690 212552592 212552737 2.080000e-49 207.0
8 TraesCS4B01G149500 chr4B 82.105 95 16 1 2841 2934 24565339 24565245 4.730000e-11 80.5
9 TraesCS4B01G149500 chr4D 97.095 2134 51 8 419 2545 166543287 166545416 0.000000e+00 3587.0
10 TraesCS4B01G149500 chr4D 93.070 1674 61 24 3899 5546 166546440 166548084 0.000000e+00 2398.0
11 TraesCS4B01G149500 chr4D 89.381 970 69 19 2944 3905 166545428 166546371 0.000000e+00 1190.0
12 TraesCS4B01G149500 chr4D 89.130 92 9 1 2844 2935 105134480 105134570 4.660000e-21 113.0
13 TraesCS4B01G149500 chr4D 89.412 85 9 0 2850 2934 35665566 35665482 2.170000e-19 108.0
14 TraesCS4B01G149500 chr4D 96.970 33 1 0 1040 1072 235447309 235447277 7.960000e-04 56.5
15 TraesCS4B01G149500 chr4A 96.092 1919 53 7 627 2544 294295775 294297672 0.000000e+00 3109.0
16 TraesCS4B01G149500 chr4A 91.688 1552 87 22 3899 5423 294299727 294301263 0.000000e+00 2113.0
17 TraesCS4B01G149500 chr4A 88.636 572 47 9 3344 3904 294297695 294298259 0.000000e+00 680.0
18 TraesCS4B01G149500 chr4A 94.249 313 13 5 2549 2861 661887920 661887613 1.860000e-129 473.0
19 TraesCS4B01G149500 chr4A 88.636 88 10 0 2850 2937 712853534 712853621 2.170000e-19 108.0
20 TraesCS4B01G149500 chr3B 96.633 297 10 0 2550 2846 651374082 651373786 1.420000e-135 494.0
21 TraesCS4B01G149500 chr3B 95.681 301 13 0 2550 2850 662857186 662856886 8.570000e-133 484.0
22 TraesCS4B01G149500 chr3B 84.866 337 43 8 50 383 71590046 71589715 3.290000e-87 333.0
23 TraesCS4B01G149500 chr3B 84.437 302 42 5 5 305 166533290 166532993 5.580000e-75 292.0
24 TraesCS4B01G149500 chr3B 78.512 121 25 1 6 125 780828219 780828099 1.700000e-10 78.7
25 TraesCS4B01G149500 chrUn 96.296 297 11 0 2549 2845 78173365 78173661 6.630000e-134 488.0
26 TraesCS4B01G149500 chr7B 94.888 313 11 5 2549 2861 187142617 187142924 8.570000e-133 484.0
27 TraesCS4B01G149500 chr7B 94.569 313 14 3 2549 2861 127530067 127529758 1.110000e-131 481.0
28 TraesCS4B01G149500 chr7B 95.364 302 14 0 2549 2850 528985251 528984950 1.110000e-131 481.0
29 TraesCS4B01G149500 chr7B 94.569 313 12 5 2549 2861 41144972 41145279 3.990000e-131 479.0
30 TraesCS4B01G149500 chr7B 93.151 146 8 2 5546 5690 198575677 198575533 4.470000e-51 213.0
31 TraesCS4B01G149500 chr5B 95.681 301 13 0 2550 2850 627033286 627033586 8.570000e-133 484.0
32 TraesCS4B01G149500 chr1D 78.811 387 72 9 3 386 484121405 484121026 9.460000e-63 252.0
33 TraesCS4B01G149500 chr6B 79.672 305 56 5 5 305 646556150 646556452 1.240000e-51 215.0
34 TraesCS4B01G149500 chr2B 92.414 145 10 1 5545 5688 445027287 445027143 7.470000e-49 206.0
35 TraesCS4B01G149500 chr1B 90.909 88 8 0 2850 2937 525700464 525700551 1.000000e-22 119.0
36 TraesCS4B01G149500 chr6A 89.535 86 9 0 2849 2934 611301288 611301203 6.030000e-20 110.0
37 TraesCS4B01G149500 chr7D 89.412 85 9 0 2850 2934 490883310 490883226 2.170000e-19 108.0
38 TraesCS4B01G149500 chr7D 92.308 39 3 0 4394 4432 509836012 509835974 7.960000e-04 56.5
39 TraesCS4B01G149500 chr7D 96.875 32 1 0 1041 1072 205117315 205117284 3.000000e-03 54.7
40 TraesCS4B01G149500 chr7A 87.640 89 10 1 2847 2934 483049317 483049229 1.010000e-17 102.0
41 TraesCS4B01G149500 chr7A 94.286 35 2 0 1038 1072 525319888 525319922 3.000000e-03 54.7
42 TraesCS4B01G149500 chr5A 87.500 88 11 0 2849 2936 584414663 584414750 1.010000e-17 102.0
43 TraesCS4B01G149500 chr5A 94.595 37 1 1 1036 1072 258789296 258789261 7.960000e-04 56.5
44 TraesCS4B01G149500 chr6D 88.608 79 9 0 2845 2923 435751026 435751104 4.690000e-16 97.1
45 TraesCS4B01G149500 chr6D 96.875 32 1 0 1041 1072 350884501 350884470 3.000000e-03 54.7
46 TraesCS4B01G149500 chr2A 87.209 86 9 2 2846 2931 231780892 231780809 4.690000e-16 97.1
47 TraesCS4B01G149500 chr2A 81.720 93 16 1 2844 2935 202889831 202889739 6.110000e-10 76.8
48 TraesCS4B01G149500 chr2A 89.130 46 4 1 2845 2890 613242198 613242154 7.960000e-04 56.5
49 TraesCS4B01G149500 chr2A 94.286 35 2 0 1038 1072 344841439 344841473 3.000000e-03 54.7
50 TraesCS4B01G149500 chr3A 85.106 94 12 2 2843 2934 74353275 74353182 1.690000e-15 95.3
51 TraesCS4B01G149500 chr3A 94.286 35 2 0 1038 1072 143994560 143994594 3.000000e-03 54.7
52 TraesCS4B01G149500 chr5D 88.710 62 5 2 2846 2905 6085166 6085105 2.200000e-09 75.0
53 TraesCS4B01G149500 chr2D 80.851 94 17 1 3787 3879 591920494 591920401 7.910000e-09 73.1
54 TraesCS4B01G149500 chr3D 92.308 39 3 0 3829 3867 608565035 608564997 7.960000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G149500 chr4B 222558370 222564059 5689 True 10508.000000 10508 100.000000 1 5690 1 chr4B.!!$R7 5689
1 TraesCS4B01G149500 chr4B 222543061 222546017 2956 True 5422.000000 5422 99.763000 2734 5690 1 chr4B.!!$R6 2956
2 TraesCS4B01G149500 chr4D 166543287 166548084 4797 False 2391.666667 3587 93.182000 419 5546 3 chr4D.!!$F2 5127
3 TraesCS4B01G149500 chr4A 294295775 294301263 5488 False 1967.333333 3109 92.138667 627 5423 3 chr4A.!!$F2 4796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.038526 ACTTACCAGAGTTGCGACGG 60.039 55.0 0.00 0.00 0.0 4.79 F
296 297 0.041982 GGAGGGAGAGGAACCAGACT 59.958 60.0 0.00 0.00 0.0 3.24 F
578 579 0.107654 AAATACAGCACTCTCCCGCC 60.108 55.0 0.00 0.00 0.0 6.13 F
919 926 0.249073 ATCTCAGCGTGCGTCATACC 60.249 55.0 0.00 0.00 0.0 2.73 F
921 928 0.528466 CTCAGCGTGCGTCATACCAT 60.528 55.0 0.00 0.00 0.0 3.55 F
2687 2694 0.662619 ACCACTGCATGTCGTGTTTG 59.337 50.0 13.12 3.87 0.0 2.93 F
2728 2735 0.034767 CATGCACACCCCACATCTCT 60.035 55.0 0.00 0.00 0.0 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1499 1506 2.111251 GGATAGGGCCGGTGAAGC 59.889 66.667 1.90 0.0 0.00 3.86 R
1764 1771 2.979120 GGGTTACCGGCAAACGCA 60.979 61.111 24.04 0.0 42.52 5.24 R
2499 2506 2.662309 GGTCTTACCGTGGAGGACA 58.338 57.895 0.00 0.0 45.00 4.02 R
2709 2716 0.034767 AGAGATGTGGGGTGTGCATG 60.035 55.000 0.00 0.0 0.00 4.06 R
2710 2717 0.700564 AAGAGATGTGGGGTGTGCAT 59.299 50.000 0.00 0.0 0.00 3.96 R
4150 5652 4.210304 GCTCACGAACCGCATCGC 62.210 66.667 7.83 0.0 46.51 4.58 R
5554 7139 5.658190 GGGCGGGTCATACCTAATAGTTATA 59.342 44.000 0.00 0.0 38.64 0.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.875561 GACAGGAGAACTTACCAGAGTT 57.124 45.455 0.00 0.00 42.31 3.01
22 23 4.561105 GACAGGAGAACTTACCAGAGTTG 58.439 47.826 0.00 0.00 39.84 3.16
23 24 3.244249 ACAGGAGAACTTACCAGAGTTGC 60.244 47.826 0.00 0.00 39.84 4.17
24 25 2.028930 AGGAGAACTTACCAGAGTTGCG 60.029 50.000 0.00 0.00 39.84 4.85
25 26 2.029290 GGAGAACTTACCAGAGTTGCGA 60.029 50.000 0.00 0.00 39.84 5.10
26 27 2.987821 GAGAACTTACCAGAGTTGCGAC 59.012 50.000 0.00 0.00 39.84 5.19
27 28 1.719780 GAACTTACCAGAGTTGCGACG 59.280 52.381 0.00 0.00 39.84 5.12
28 29 0.038526 ACTTACCAGAGTTGCGACGG 60.039 55.000 0.00 0.00 0.00 4.79
29 30 1.352156 CTTACCAGAGTTGCGACGGC 61.352 60.000 0.00 0.00 40.52 5.68
30 31 3.620300 TACCAGAGTTGCGACGGCG 62.620 63.158 6.12 6.12 44.10 6.46
31 32 4.717629 CCAGAGTTGCGACGGCGA 62.718 66.667 18.90 0.00 44.10 5.54
32 33 2.507102 CAGAGTTGCGACGGCGAT 60.507 61.111 18.90 0.00 44.10 4.58
33 34 2.507102 AGAGTTGCGACGGCGATG 60.507 61.111 18.90 6.30 44.10 3.84
34 35 2.506217 GAGTTGCGACGGCGATGA 60.506 61.111 18.90 0.00 44.10 2.92
35 36 2.507102 AGTTGCGACGGCGATGAG 60.507 61.111 18.90 2.30 44.10 2.90
36 37 2.506217 GTTGCGACGGCGATGAGA 60.506 61.111 18.90 0.00 44.10 3.27
37 38 2.202610 TTGCGACGGCGATGAGAG 60.203 61.111 18.90 0.00 44.10 3.20
38 39 2.696759 TTGCGACGGCGATGAGAGA 61.697 57.895 18.90 0.00 44.10 3.10
39 40 2.004808 TTGCGACGGCGATGAGAGAT 62.005 55.000 18.90 0.00 44.10 2.75
40 41 1.727723 GCGACGGCGATGAGAGATC 60.728 63.158 18.90 0.00 40.82 2.75
41 42 1.081774 CGACGGCGATGAGAGATCC 60.082 63.158 16.62 0.00 40.82 3.36
42 43 1.081774 GACGGCGATGAGAGATCCG 60.082 63.158 16.62 0.00 45.04 4.18
43 44 1.507974 GACGGCGATGAGAGATCCGA 61.508 60.000 16.62 0.00 42.43 4.55
44 45 1.101635 ACGGCGATGAGAGATCCGAA 61.102 55.000 16.62 0.00 42.43 4.30
45 46 0.661780 CGGCGATGAGAGATCCGAAC 60.662 60.000 0.00 0.00 42.43 3.95
46 47 0.319125 GGCGATGAGAGATCCGAACC 60.319 60.000 0.00 0.00 0.00 3.62
47 48 0.319125 GCGATGAGAGATCCGAACCC 60.319 60.000 0.00 0.00 0.00 4.11
48 49 1.032794 CGATGAGAGATCCGAACCCA 58.967 55.000 0.00 0.00 0.00 4.51
49 50 1.409064 CGATGAGAGATCCGAACCCAA 59.591 52.381 0.00 0.00 0.00 4.12
50 51 2.799917 CGATGAGAGATCCGAACCCAAC 60.800 54.545 0.00 0.00 0.00 3.77
51 52 0.902531 TGAGAGATCCGAACCCAACC 59.097 55.000 0.00 0.00 0.00 3.77
52 53 0.902531 GAGAGATCCGAACCCAACCA 59.097 55.000 0.00 0.00 0.00 3.67
53 54 0.905357 AGAGATCCGAACCCAACCAG 59.095 55.000 0.00 0.00 0.00 4.00
54 55 0.744771 GAGATCCGAACCCAACCAGC 60.745 60.000 0.00 0.00 0.00 4.85
55 56 1.002624 GATCCGAACCCAACCAGCA 60.003 57.895 0.00 0.00 0.00 4.41
56 57 0.394352 GATCCGAACCCAACCAGCAT 60.394 55.000 0.00 0.00 0.00 3.79
57 58 0.916086 ATCCGAACCCAACCAGCATA 59.084 50.000 0.00 0.00 0.00 3.14
58 59 0.693622 TCCGAACCCAACCAGCATAA 59.306 50.000 0.00 0.00 0.00 1.90
59 60 1.094785 CCGAACCCAACCAGCATAAG 58.905 55.000 0.00 0.00 0.00 1.73
60 61 1.339631 CCGAACCCAACCAGCATAAGA 60.340 52.381 0.00 0.00 0.00 2.10
61 62 1.737793 CGAACCCAACCAGCATAAGAC 59.262 52.381 0.00 0.00 0.00 3.01
62 63 1.737793 GAACCCAACCAGCATAAGACG 59.262 52.381 0.00 0.00 0.00 4.18
63 64 0.981183 ACCCAACCAGCATAAGACGA 59.019 50.000 0.00 0.00 0.00 4.20
64 65 1.338769 ACCCAACCAGCATAAGACGAC 60.339 52.381 0.00 0.00 0.00 4.34
65 66 0.999406 CCAACCAGCATAAGACGACG 59.001 55.000 0.00 0.00 0.00 5.12
66 67 0.999406 CAACCAGCATAAGACGACGG 59.001 55.000 0.00 0.00 0.00 4.79
67 68 0.739813 AACCAGCATAAGACGACGGC 60.740 55.000 0.00 0.00 0.00 5.68
68 69 2.230940 CCAGCATAAGACGACGGCG 61.231 63.158 10.39 10.39 44.79 6.46
69 70 1.226575 CAGCATAAGACGACGGCGA 60.227 57.895 22.49 0.00 41.64 5.54
70 71 1.226603 AGCATAAGACGACGGCGAC 60.227 57.895 22.49 13.05 41.64 5.19
104 105 4.660938 GACCCCCAGGCGCAAACT 62.661 66.667 10.83 0.00 36.11 2.66
105 106 4.218686 ACCCCCAGGCGCAAACTT 62.219 61.111 10.83 0.00 36.11 2.66
106 107 3.683937 CCCCCAGGCGCAAACTTG 61.684 66.667 10.83 0.00 0.00 3.16
136 137 3.706373 GCAGCGGTGGGAGAAGGA 61.706 66.667 17.54 0.00 0.00 3.36
137 138 2.581354 CAGCGGTGGGAGAAGGAG 59.419 66.667 6.74 0.00 0.00 3.69
138 139 3.394836 AGCGGTGGGAGAAGGAGC 61.395 66.667 0.00 0.00 0.00 4.70
139 140 4.475135 GCGGTGGGAGAAGGAGCC 62.475 72.222 0.00 0.00 0.00 4.70
140 141 3.787001 CGGTGGGAGAAGGAGCCC 61.787 72.222 0.00 0.00 44.93 5.19
144 145 4.475135 GGGAGAAGGAGCCCGCAC 62.475 72.222 0.00 0.00 34.00 5.34
145 146 3.706373 GGAGAAGGAGCCCGCACA 61.706 66.667 0.00 0.00 0.00 4.57
146 147 2.125350 GAGAAGGAGCCCGCACAG 60.125 66.667 0.00 0.00 0.00 3.66
147 148 3.672295 GAGAAGGAGCCCGCACAGG 62.672 68.421 0.00 0.00 40.63 4.00
148 149 3.706373 GAAGGAGCCCGCACAGGA 61.706 66.667 0.00 0.00 45.00 3.86
149 150 3.249189 AAGGAGCCCGCACAGGAA 61.249 61.111 0.00 0.00 45.00 3.36
150 151 3.259633 AAGGAGCCCGCACAGGAAG 62.260 63.158 0.00 0.00 45.00 3.46
151 152 4.785453 GGAGCCCGCACAGGAAGG 62.785 72.222 0.00 0.00 45.00 3.46
152 153 3.706373 GAGCCCGCACAGGAAGGA 61.706 66.667 0.00 0.00 45.00 3.36
153 154 3.959991 GAGCCCGCACAGGAAGGAC 62.960 68.421 0.00 0.00 45.00 3.85
155 156 4.760047 CCCGCACAGGAAGGACCG 62.760 72.222 0.00 0.00 45.00 4.79
156 157 4.760047 CCGCACAGGAAGGACCGG 62.760 72.222 0.00 0.00 45.00 5.28
159 160 3.691342 CACAGGAAGGACCGGCGA 61.691 66.667 9.30 0.00 44.74 5.54
160 161 2.920912 ACAGGAAGGACCGGCGAA 60.921 61.111 9.30 0.00 44.74 4.70
161 162 2.125512 CAGGAAGGACCGGCGAAG 60.126 66.667 9.30 0.00 44.74 3.79
162 163 3.391382 AGGAAGGACCGGCGAAGG 61.391 66.667 9.30 0.00 44.74 3.46
173 174 3.191539 GCGAAGGCGAGCAAGAGG 61.192 66.667 0.00 0.00 40.82 3.69
174 175 3.191539 CGAAGGCGAGCAAGAGGC 61.192 66.667 0.00 0.00 45.30 4.70
175 176 2.821810 GAAGGCGAGCAAGAGGCC 60.822 66.667 0.00 0.00 46.50 5.19
190 191 4.933064 GCCGCCTCATCCGACGAG 62.933 72.222 0.00 0.00 0.00 4.18
191 192 4.933064 CCGCCTCATCCGACGAGC 62.933 72.222 0.00 0.00 0.00 5.03
192 193 4.193334 CGCCTCATCCGACGAGCA 62.193 66.667 0.00 0.00 0.00 4.26
193 194 2.184322 GCCTCATCCGACGAGCAA 59.816 61.111 0.00 0.00 0.00 3.91
194 195 1.227380 GCCTCATCCGACGAGCAAT 60.227 57.895 0.00 0.00 0.00 3.56
195 196 1.218230 GCCTCATCCGACGAGCAATC 61.218 60.000 0.00 0.00 0.00 2.67
196 197 0.598680 CCTCATCCGACGAGCAATCC 60.599 60.000 0.00 0.00 0.00 3.01
197 198 0.387202 CTCATCCGACGAGCAATCCT 59.613 55.000 0.00 0.00 0.00 3.24
198 199 0.385751 TCATCCGACGAGCAATCCTC 59.614 55.000 0.00 0.00 37.22 3.71
199 200 0.103026 CATCCGACGAGCAATCCTCA 59.897 55.000 0.00 0.00 40.78 3.86
200 201 1.043816 ATCCGACGAGCAATCCTCAT 58.956 50.000 0.00 0.00 40.78 2.90
201 202 0.385751 TCCGACGAGCAATCCTCATC 59.614 55.000 0.00 0.00 40.78 2.92
203 204 2.892305 GACGAGCAATCCTCATCGG 58.108 57.895 0.00 0.00 40.78 4.18
217 218 4.689549 TCGGAGTCGAGGGCCCAA 62.690 66.667 27.56 5.89 40.88 4.12
218 219 3.702048 CGGAGTCGAGGGCCCAAA 61.702 66.667 27.56 5.44 39.00 3.28
219 220 2.754375 GGAGTCGAGGGCCCAAAA 59.246 61.111 27.56 4.99 0.00 2.44
220 221 1.377333 GGAGTCGAGGGCCCAAAAG 60.377 63.158 27.56 12.17 0.00 2.27
221 222 2.034221 AGTCGAGGGCCCAAAAGC 59.966 61.111 27.56 10.00 0.00 3.51
222 223 3.431725 GTCGAGGGCCCAAAAGCG 61.432 66.667 27.56 18.65 0.00 4.68
223 224 3.632080 TCGAGGGCCCAAAAGCGA 61.632 61.111 27.56 20.65 0.00 4.93
224 225 3.127533 CGAGGGCCCAAAAGCGAG 61.128 66.667 27.56 1.22 0.00 5.03
225 226 2.351276 GAGGGCCCAAAAGCGAGA 59.649 61.111 27.56 0.00 0.00 4.04
226 227 1.746991 GAGGGCCCAAAAGCGAGAG 60.747 63.158 27.56 0.00 0.00 3.20
245 246 4.096003 CAAGTGGCGTCGGGGGAT 62.096 66.667 0.00 0.00 0.00 3.85
246 247 4.096003 AAGTGGCGTCGGGGGATG 62.096 66.667 0.00 0.00 0.00 3.51
248 249 4.530857 GTGGCGTCGGGGGATGAG 62.531 72.222 0.00 0.00 0.00 2.90
253 254 3.467226 GTCGGGGGATGAGCCGAA 61.467 66.667 0.00 0.00 37.63 4.30
254 255 2.685743 TCGGGGGATGAGCCGAAA 60.686 61.111 0.00 0.00 37.63 3.46
255 256 2.513897 CGGGGGATGAGCCGAAAC 60.514 66.667 0.00 0.00 37.63 2.78
256 257 2.124278 GGGGGATGAGCCGAAACC 60.124 66.667 0.00 0.00 37.63 3.27
257 258 2.124278 GGGGATGAGCCGAAACCC 60.124 66.667 0.00 0.00 39.79 4.11
258 259 2.513897 GGGATGAGCCGAAACCCG 60.514 66.667 0.00 0.00 37.63 5.28
259 260 2.267961 GGATGAGCCGAAACCCGT 59.732 61.111 0.00 0.00 36.31 5.28
260 261 2.106683 GGATGAGCCGAAACCCGTG 61.107 63.158 0.00 0.00 36.31 4.94
261 262 2.046314 ATGAGCCGAAACCCGTGG 60.046 61.111 0.00 0.00 36.31 4.94
284 285 4.856607 GCGAGCGAACGGAGGGAG 62.857 72.222 0.00 0.00 0.00 4.30
285 286 3.132139 CGAGCGAACGGAGGGAGA 61.132 66.667 0.00 0.00 0.00 3.71
286 287 2.802106 GAGCGAACGGAGGGAGAG 59.198 66.667 0.00 0.00 0.00 3.20
287 288 2.756283 AGCGAACGGAGGGAGAGG 60.756 66.667 0.00 0.00 0.00 3.69
288 289 2.754658 GCGAACGGAGGGAGAGGA 60.755 66.667 0.00 0.00 0.00 3.71
289 290 2.348888 GCGAACGGAGGGAGAGGAA 61.349 63.158 0.00 0.00 0.00 3.36
290 291 1.511768 CGAACGGAGGGAGAGGAAC 59.488 63.158 0.00 0.00 0.00 3.62
291 292 1.898885 GAACGGAGGGAGAGGAACC 59.101 63.158 0.00 0.00 0.00 3.62
292 293 0.903454 GAACGGAGGGAGAGGAACCA 60.903 60.000 0.00 0.00 0.00 3.67
293 294 0.905337 AACGGAGGGAGAGGAACCAG 60.905 60.000 0.00 0.00 0.00 4.00
294 295 1.000486 CGGAGGGAGAGGAACCAGA 60.000 63.158 0.00 0.00 0.00 3.86
295 296 1.324005 CGGAGGGAGAGGAACCAGAC 61.324 65.000 0.00 0.00 0.00 3.51
296 297 0.041982 GGAGGGAGAGGAACCAGACT 59.958 60.000 0.00 0.00 0.00 3.24
297 298 1.480789 GAGGGAGAGGAACCAGACTC 58.519 60.000 0.00 0.00 0.00 3.36
298 299 0.323908 AGGGAGAGGAACCAGACTCG 60.324 60.000 0.00 0.00 38.72 4.18
299 300 1.324005 GGGAGAGGAACCAGACTCGG 61.324 65.000 0.00 0.00 38.72 4.63
300 301 0.323542 GGAGAGGAACCAGACTCGGA 60.324 60.000 0.00 0.00 38.72 4.55
301 302 1.099689 GAGAGGAACCAGACTCGGAG 58.900 60.000 2.83 2.83 38.72 4.63
302 303 0.323908 AGAGGAACCAGACTCGGAGG 60.324 60.000 10.23 0.00 38.72 4.30
303 304 0.323542 GAGGAACCAGACTCGGAGGA 60.324 60.000 10.23 0.00 0.00 3.71
304 305 0.323908 AGGAACCAGACTCGGAGGAG 60.324 60.000 10.23 0.00 46.13 3.69
305 306 0.323542 GGAACCAGACTCGGAGGAGA 60.324 60.000 10.23 0.00 43.27 3.71
306 307 1.546961 GAACCAGACTCGGAGGAGAA 58.453 55.000 10.23 0.00 43.27 2.87
307 308 1.474879 GAACCAGACTCGGAGGAGAAG 59.525 57.143 10.23 0.00 43.27 2.85
308 309 0.323908 ACCAGACTCGGAGGAGAAGG 60.324 60.000 10.23 6.36 43.27 3.46
309 310 1.671901 CCAGACTCGGAGGAGAAGGC 61.672 65.000 10.23 0.00 43.27 4.35
310 311 0.967887 CAGACTCGGAGGAGAAGGCA 60.968 60.000 10.23 0.00 43.27 4.75
311 312 0.682855 AGACTCGGAGGAGAAGGCAG 60.683 60.000 10.23 0.00 43.27 4.85
312 313 0.681564 GACTCGGAGGAGAAGGCAGA 60.682 60.000 10.23 0.00 43.27 4.26
313 314 0.968393 ACTCGGAGGAGAAGGCAGAC 60.968 60.000 10.23 0.00 43.27 3.51
314 315 1.671901 CTCGGAGGAGAAGGCAGACC 61.672 65.000 0.00 0.00 43.27 3.85
315 316 2.896443 GGAGGAGAAGGCAGACCG 59.104 66.667 0.00 0.00 42.76 4.79
316 317 2.726351 GGAGGAGAAGGCAGACCGG 61.726 68.421 0.00 0.00 42.76 5.28
317 318 1.682684 GAGGAGAAGGCAGACCGGA 60.683 63.158 9.46 0.00 42.76 5.14
318 319 1.671901 GAGGAGAAGGCAGACCGGAG 61.672 65.000 9.46 0.00 42.76 4.63
331 332 2.125512 CGGAGGAGCAAGGAACGG 60.126 66.667 0.00 0.00 0.00 4.44
332 333 2.436824 GGAGGAGCAAGGAACGGC 60.437 66.667 0.00 0.00 0.00 5.68
333 334 2.815647 GAGGAGCAAGGAACGGCG 60.816 66.667 4.80 4.80 38.48 6.46
334 335 4.394712 AGGAGCAAGGAACGGCGG 62.395 66.667 13.24 0.00 38.48 6.13
352 353 4.558884 CGGAGGGGTAGGGGAGGG 62.559 77.778 0.00 0.00 0.00 4.30
353 354 4.188511 GGAGGGGTAGGGGAGGGG 62.189 77.778 0.00 0.00 0.00 4.79
354 355 4.188511 GAGGGGTAGGGGAGGGGG 62.189 77.778 0.00 0.00 0.00 5.40
355 356 4.773222 AGGGGTAGGGGAGGGGGA 62.773 72.222 0.00 0.00 0.00 4.81
356 357 4.188511 GGGGTAGGGGAGGGGGAG 62.189 77.778 0.00 0.00 0.00 4.30
357 358 4.188511 GGGTAGGGGAGGGGGAGG 62.189 77.778 0.00 0.00 0.00 4.30
358 359 3.040814 GGTAGGGGAGGGGGAGGA 61.041 72.222 0.00 0.00 0.00 3.71
359 360 2.615773 GTAGGGGAGGGGGAGGAG 59.384 72.222 0.00 0.00 0.00 3.69
360 361 2.019272 GTAGGGGAGGGGGAGGAGA 61.019 68.421 0.00 0.00 0.00 3.71
361 362 1.705450 TAGGGGAGGGGGAGGAGAG 60.705 68.421 0.00 0.00 0.00 3.20
362 363 4.179599 GGGGAGGGGGAGGAGAGG 62.180 77.778 0.00 0.00 0.00 3.69
363 364 4.179599 GGGAGGGGGAGGAGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
364 365 4.179599 GGAGGGGGAGGAGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
365 366 4.890306 GAGGGGGAGGAGAGGGGC 62.890 77.778 0.00 0.00 0.00 5.80
369 370 4.144727 GGGAGGAGAGGGGCGAGA 62.145 72.222 0.00 0.00 0.00 4.04
370 371 2.520741 GGAGGAGAGGGGCGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
371 372 2.520741 GAGGAGAGGGGCGAGAGG 60.521 72.222 0.00 0.00 0.00 3.69
372 373 4.150454 AGGAGAGGGGCGAGAGGG 62.150 72.222 0.00 0.00 0.00 4.30
388 389 2.288643 GGGGGAGAGGAGAGGCAT 59.711 66.667 0.00 0.00 0.00 4.40
389 390 1.841103 GGGGGAGAGGAGAGGCATC 60.841 68.421 0.00 0.00 0.00 3.91
390 391 1.074926 GGGGAGAGGAGAGGCATCA 60.075 63.158 0.00 0.00 0.00 3.07
391 392 1.406860 GGGGAGAGGAGAGGCATCAC 61.407 65.000 0.00 0.00 0.00 3.06
392 393 1.406860 GGGAGAGGAGAGGCATCACC 61.407 65.000 6.74 6.74 37.33 4.02
393 394 1.739049 GAGAGGAGAGGCATCACCG 59.261 63.158 9.21 0.00 46.52 4.94
394 395 1.743321 GAGAGGAGAGGCATCACCGG 61.743 65.000 9.21 0.00 46.52 5.28
395 396 1.758514 GAGGAGAGGCATCACCGGA 60.759 63.158 9.46 0.00 46.52 5.14
396 397 1.074926 AGGAGAGGCATCACCGGAT 60.075 57.895 9.46 0.00 46.52 4.18
397 398 1.118356 AGGAGAGGCATCACCGGATC 61.118 60.000 9.46 0.00 46.52 3.36
398 399 1.402896 GGAGAGGCATCACCGGATCA 61.403 60.000 9.46 0.00 46.52 2.92
399 400 0.249657 GAGAGGCATCACCGGATCAC 60.250 60.000 9.46 0.00 46.52 3.06
400 401 1.592669 GAGGCATCACCGGATCACG 60.593 63.158 9.46 0.00 46.52 4.35
401 402 2.186903 GGCATCACCGGATCACGT 59.813 61.111 9.46 0.00 42.24 4.49
402 403 1.449601 GGCATCACCGGATCACGTT 60.450 57.895 9.46 0.00 42.24 3.99
403 404 1.024579 GGCATCACCGGATCACGTTT 61.025 55.000 9.46 0.00 42.24 3.60
404 405 0.802494 GCATCACCGGATCACGTTTT 59.198 50.000 9.46 0.00 42.24 2.43
405 406 1.199097 GCATCACCGGATCACGTTTTT 59.801 47.619 9.46 0.00 42.24 1.94
406 407 2.727916 GCATCACCGGATCACGTTTTTC 60.728 50.000 9.46 0.00 42.24 2.29
407 408 2.536761 TCACCGGATCACGTTTTTCT 57.463 45.000 9.46 0.00 42.24 2.52
408 409 2.409975 TCACCGGATCACGTTTTTCTC 58.590 47.619 9.46 0.00 42.24 2.87
409 410 1.463444 CACCGGATCACGTTTTTCTCC 59.537 52.381 9.46 0.00 42.24 3.71
410 411 1.346722 ACCGGATCACGTTTTTCTCCT 59.653 47.619 9.46 0.00 42.24 3.69
411 412 2.224450 ACCGGATCACGTTTTTCTCCTT 60.224 45.455 9.46 0.00 42.24 3.36
412 413 2.159627 CCGGATCACGTTTTTCTCCTTG 59.840 50.000 0.00 0.00 42.24 3.61
413 414 2.412847 CGGATCACGTTTTTCTCCTTGC 60.413 50.000 0.00 0.00 37.93 4.01
414 415 2.552315 GGATCACGTTTTTCTCCTTGCA 59.448 45.455 0.00 0.00 0.00 4.08
415 416 3.555518 GATCACGTTTTTCTCCTTGCAC 58.444 45.455 0.00 0.00 0.00 4.57
416 417 1.329292 TCACGTTTTTCTCCTTGCACG 59.671 47.619 0.00 0.00 0.00 5.34
417 418 1.063469 CACGTTTTTCTCCTTGCACGT 59.937 47.619 0.00 0.00 41.33 4.49
423 424 0.242825 TTCTCCTTGCACGTACCTCG 59.757 55.000 0.00 0.00 46.00 4.63
451 452 3.815856 TCCACAAAAATGAAGCAAGCA 57.184 38.095 0.00 0.00 0.00 3.91
461 462 3.837213 TGAAGCAAGCATAGCAACTTC 57.163 42.857 10.01 10.01 35.83 3.01
523 524 3.988976 AGATGGCTGCTGAAGAAAGTA 57.011 42.857 0.00 0.00 0.00 2.24
525 526 2.928801 TGGCTGCTGAAGAAAGTACA 57.071 45.000 0.00 0.00 0.00 2.90
569 570 4.342772 CGGAAGCATGTTAAATACAGCAC 58.657 43.478 0.00 0.00 40.83 4.40
578 579 0.107654 AAATACAGCACTCTCCCGCC 60.108 55.000 0.00 0.00 0.00 6.13
583 584 1.150536 AGCACTCTCCCGCCAAAAA 59.849 52.632 0.00 0.00 0.00 1.94
624 627 6.573094 GCAGTGCTATGATATACTGATGGTCA 60.573 42.308 8.18 0.00 42.28 4.02
843 850 8.988934 ACTTTTCTTTTCTTTTCTTTTGTGGAC 58.011 29.630 0.00 0.00 0.00 4.02
919 926 0.249073 ATCTCAGCGTGCGTCATACC 60.249 55.000 0.00 0.00 0.00 2.73
920 927 1.153842 CTCAGCGTGCGTCATACCA 60.154 57.895 0.00 0.00 0.00 3.25
921 928 0.528466 CTCAGCGTGCGTCATACCAT 60.528 55.000 0.00 0.00 0.00 3.55
922 929 0.741915 TCAGCGTGCGTCATACCATA 59.258 50.000 0.00 0.00 0.00 2.74
1043 1050 5.833131 ACATTTACAGAGGCTGGAAGAAAAA 59.167 36.000 0.00 0.00 35.56 1.94
1499 1506 0.992072 CTGTATCTGTCGCACAACGG 59.008 55.000 0.00 0.00 43.89 4.44
1764 1771 1.660575 CACGCGGTTCAACGAGTCT 60.661 57.895 12.47 0.00 44.80 3.24
2013 2020 2.103042 GCAAGACGAGCAGCGGAAT 61.103 57.895 4.06 0.00 46.49 3.01
2177 2184 4.903010 GACACGTGGTGGTGCCGT 62.903 66.667 21.57 0.00 41.65 5.68
2385 2392 2.772287 GAGGAGTTTGAGAACCACCTG 58.228 52.381 9.28 0.00 40.59 4.00
2416 2423 2.928396 AGCTACGCCACCCCAACT 60.928 61.111 0.00 0.00 0.00 3.16
2421 2428 2.346284 TACGCCACCCCAACTTGCTT 62.346 55.000 0.00 0.00 0.00 3.91
2499 2506 3.610669 CGCGGCAGCCTCCTCTAT 61.611 66.667 10.54 0.00 41.18 1.98
2559 2566 8.836268 ATGATTACTAGTACTTACTCTCTCCG 57.164 38.462 0.00 0.00 37.73 4.63
2560 2567 7.790027 TGATTACTAGTACTTACTCTCTCCGT 58.210 38.462 0.00 0.00 37.73 4.69
2561 2568 7.925483 TGATTACTAGTACTTACTCTCTCCGTC 59.075 40.741 0.00 0.00 37.73 4.79
2562 2569 5.937975 ACTAGTACTTACTCTCTCCGTCT 57.062 43.478 0.00 0.00 37.73 4.18
2563 2570 8.526667 TTACTAGTACTTACTCTCTCCGTCTA 57.473 38.462 0.00 0.00 37.73 2.59
2564 2571 7.042797 ACTAGTACTTACTCTCTCCGTCTAG 57.957 44.000 0.00 0.00 37.73 2.43
2565 2572 5.280654 AGTACTTACTCTCTCCGTCTAGG 57.719 47.826 0.00 0.00 42.97 3.02
2566 2573 4.716287 AGTACTTACTCTCTCCGTCTAGGT 59.284 45.833 0.00 0.00 41.99 3.08
2567 2574 3.876341 ACTTACTCTCTCCGTCTAGGTG 58.124 50.000 0.00 0.00 41.99 4.00
2568 2575 3.518705 ACTTACTCTCTCCGTCTAGGTGA 59.481 47.826 0.00 0.00 41.99 4.02
2574 2581 3.996921 TCTCCGTCTAGGTGAGTAAGT 57.003 47.619 0.00 0.00 41.99 2.24
2575 2582 3.871485 TCTCCGTCTAGGTGAGTAAGTC 58.129 50.000 0.00 0.00 41.99 3.01
2576 2583 3.262660 TCTCCGTCTAGGTGAGTAAGTCA 59.737 47.826 0.00 0.00 41.99 3.41
2577 2584 4.080469 TCTCCGTCTAGGTGAGTAAGTCAT 60.080 45.833 0.00 0.00 41.99 3.06
2578 2585 4.197750 TCCGTCTAGGTGAGTAAGTCATC 58.802 47.826 0.00 0.00 41.99 2.92
2580 2587 4.641094 CCGTCTAGGTGAGTAAGTCATCTT 59.359 45.833 0.00 0.00 45.09 2.40
2581 2588 5.821470 CCGTCTAGGTGAGTAAGTCATCTTA 59.179 44.000 0.00 0.00 45.09 2.10
2582 2589 6.017770 CCGTCTAGGTGAGTAAGTCATCTTAG 60.018 46.154 0.00 0.00 45.09 2.18
2583 2590 6.017770 CGTCTAGGTGAGTAAGTCATCTTAGG 60.018 46.154 0.00 0.00 45.09 2.69
2584 2591 6.829811 GTCTAGGTGAGTAAGTCATCTTAGGT 59.170 42.308 0.00 0.00 45.09 3.08
2585 2592 7.339976 GTCTAGGTGAGTAAGTCATCTTAGGTT 59.660 40.741 0.00 0.00 45.09 3.50
2586 2593 6.287589 AGGTGAGTAAGTCATCTTAGGTTG 57.712 41.667 0.00 0.00 45.09 3.77
2587 2594 5.780793 AGGTGAGTAAGTCATCTTAGGTTGT 59.219 40.000 0.00 0.00 45.09 3.32
2588 2595 5.869888 GGTGAGTAAGTCATCTTAGGTTGTG 59.130 44.000 0.00 0.00 37.56 3.33
2589 2596 5.348997 GTGAGTAAGTCATCTTAGGTTGTGC 59.651 44.000 0.00 0.00 37.56 4.57
2590 2597 5.011635 TGAGTAAGTCATCTTAGGTTGTGCA 59.988 40.000 0.00 0.00 36.90 4.57
2591 2598 5.238583 AGTAAGTCATCTTAGGTTGTGCAC 58.761 41.667 10.75 10.75 36.90 4.57
2592 2599 4.392138 GTAAGTCATCTTAGGTTGTGCACC 59.608 45.833 15.69 0.00 39.22 5.01
2593 2600 4.858007 TAAGTCATCTTAGGTTGTGCACCG 60.858 45.833 15.69 0.00 41.54 4.94
2594 2601 7.249927 TAAGTCATCTTAGGTTGTGCACCGT 62.250 44.000 15.69 3.89 41.54 4.83
2599 2606 2.515057 GGTTGTGCACCGTGACCA 60.515 61.111 15.69 0.00 35.12 4.02
2600 2607 2.115911 GGTTGTGCACCGTGACCAA 61.116 57.895 15.69 1.00 35.12 3.67
2601 2608 1.063488 GTTGTGCACCGTGACCAAC 59.937 57.895 15.69 14.26 0.00 3.77
2611 2618 2.654802 GTGACCAACGAGGAGAGGA 58.345 57.895 5.70 0.00 41.22 3.71
2612 2619 0.966920 GTGACCAACGAGGAGAGGAA 59.033 55.000 5.70 0.00 41.22 3.36
2613 2620 1.343465 GTGACCAACGAGGAGAGGAAA 59.657 52.381 5.70 0.00 41.22 3.13
2614 2621 2.043992 TGACCAACGAGGAGAGGAAAA 58.956 47.619 5.70 0.00 41.22 2.29
2615 2622 2.224209 TGACCAACGAGGAGAGGAAAAC 60.224 50.000 5.70 0.00 41.22 2.43
2616 2623 1.270147 ACCAACGAGGAGAGGAAAACG 60.270 52.381 5.70 0.00 41.22 3.60
2617 2624 1.000506 CCAACGAGGAGAGGAAAACGA 59.999 52.381 0.00 0.00 41.22 3.85
2618 2625 2.329379 CAACGAGGAGAGGAAAACGAG 58.671 52.381 0.00 0.00 0.00 4.18
2619 2626 1.906990 ACGAGGAGAGGAAAACGAGA 58.093 50.000 0.00 0.00 0.00 4.04
2620 2627 1.813786 ACGAGGAGAGGAAAACGAGAG 59.186 52.381 0.00 0.00 0.00 3.20
2621 2628 2.085320 CGAGGAGAGGAAAACGAGAGA 58.915 52.381 0.00 0.00 0.00 3.10
2622 2629 2.488545 CGAGGAGAGGAAAACGAGAGAA 59.511 50.000 0.00 0.00 0.00 2.87
2623 2630 3.671164 CGAGGAGAGGAAAACGAGAGAAC 60.671 52.174 0.00 0.00 0.00 3.01
2624 2631 3.502356 AGGAGAGGAAAACGAGAGAACT 58.498 45.455 0.00 0.00 0.00 3.01
2625 2632 3.898741 AGGAGAGGAAAACGAGAGAACTT 59.101 43.478 0.00 0.00 0.00 2.66
2626 2633 5.078256 AGGAGAGGAAAACGAGAGAACTTA 58.922 41.667 0.00 0.00 0.00 2.24
2627 2634 5.539193 AGGAGAGGAAAACGAGAGAACTTAA 59.461 40.000 0.00 0.00 0.00 1.85
2628 2635 6.211785 AGGAGAGGAAAACGAGAGAACTTAAT 59.788 38.462 0.00 0.00 0.00 1.40
2629 2636 6.311690 GGAGAGGAAAACGAGAGAACTTAATG 59.688 42.308 0.00 0.00 0.00 1.90
2630 2637 6.760291 AGAGGAAAACGAGAGAACTTAATGT 58.240 36.000 0.00 0.00 0.00 2.71
2631 2638 7.217906 AGAGGAAAACGAGAGAACTTAATGTT 58.782 34.615 0.00 0.00 42.38 2.71
2675 2682 3.855689 ATGCAATGAACTAACCACTGC 57.144 42.857 0.00 0.00 0.00 4.40
2676 2683 2.580962 TGCAATGAACTAACCACTGCA 58.419 42.857 0.00 0.00 36.06 4.41
2677 2684 3.156293 TGCAATGAACTAACCACTGCAT 58.844 40.909 0.00 0.00 33.65 3.96
2678 2685 3.057386 TGCAATGAACTAACCACTGCATG 60.057 43.478 0.00 0.00 33.65 4.06
2679 2686 3.057315 GCAATGAACTAACCACTGCATGT 60.057 43.478 0.00 0.00 0.00 3.21
2680 2687 4.726416 CAATGAACTAACCACTGCATGTC 58.274 43.478 0.00 0.00 0.00 3.06
2681 2688 2.412870 TGAACTAACCACTGCATGTCG 58.587 47.619 0.00 0.00 0.00 4.35
2682 2689 2.224185 TGAACTAACCACTGCATGTCGT 60.224 45.455 0.00 0.00 0.00 4.34
2683 2690 1.795768 ACTAACCACTGCATGTCGTG 58.204 50.000 8.87 8.87 0.00 4.35
2684 2691 1.070134 ACTAACCACTGCATGTCGTGT 59.930 47.619 13.12 2.00 0.00 4.49
2685 2692 2.143122 CTAACCACTGCATGTCGTGTT 58.857 47.619 13.12 10.39 0.00 3.32
2686 2693 1.388547 AACCACTGCATGTCGTGTTT 58.611 45.000 13.12 5.09 0.00 2.83
2687 2694 0.662619 ACCACTGCATGTCGTGTTTG 59.337 50.000 13.12 3.87 0.00 2.93
2688 2695 0.943673 CCACTGCATGTCGTGTTTGA 59.056 50.000 13.12 0.00 0.00 2.69
2689 2696 1.536766 CCACTGCATGTCGTGTTTGAT 59.463 47.619 13.12 0.00 0.00 2.57
2690 2697 2.741517 CCACTGCATGTCGTGTTTGATA 59.258 45.455 13.12 0.00 0.00 2.15
2691 2698 3.181517 CCACTGCATGTCGTGTTTGATAG 60.182 47.826 13.12 0.00 0.00 2.08
2692 2699 3.433274 CACTGCATGTCGTGTTTGATAGT 59.567 43.478 7.95 0.00 0.00 2.12
2693 2700 3.679980 ACTGCATGTCGTGTTTGATAGTC 59.320 43.478 0.00 0.00 0.00 2.59
2694 2701 3.925379 TGCATGTCGTGTTTGATAGTCT 58.075 40.909 0.00 0.00 0.00 3.24
2695 2702 3.926527 TGCATGTCGTGTTTGATAGTCTC 59.073 43.478 0.00 0.00 0.00 3.36
2696 2703 3.926527 GCATGTCGTGTTTGATAGTCTCA 59.073 43.478 0.00 0.00 0.00 3.27
2697 2704 4.388773 GCATGTCGTGTTTGATAGTCTCAA 59.611 41.667 0.00 0.00 42.15 3.02
2698 2705 5.445142 GCATGTCGTGTTTGATAGTCTCAAG 60.445 44.000 0.00 0.00 44.48 3.02
2699 2706 5.196341 TGTCGTGTTTGATAGTCTCAAGT 57.804 39.130 0.00 0.00 44.48 3.16
2700 2707 5.220381 TGTCGTGTTTGATAGTCTCAAGTC 58.780 41.667 0.00 0.00 44.48 3.01
2701 2708 5.220381 GTCGTGTTTGATAGTCTCAAGTCA 58.780 41.667 0.00 0.00 44.48 3.41
2702 2709 5.864474 GTCGTGTTTGATAGTCTCAAGTCAT 59.136 40.000 0.00 0.00 44.48 3.06
2703 2710 6.366332 GTCGTGTTTGATAGTCTCAAGTCATT 59.634 38.462 0.00 0.00 44.48 2.57
2704 2711 7.541091 GTCGTGTTTGATAGTCTCAAGTCATTA 59.459 37.037 0.00 0.00 44.48 1.90
2705 2712 8.085909 TCGTGTTTGATAGTCTCAAGTCATTAA 58.914 33.333 0.00 0.00 44.48 1.40
2706 2713 8.708742 CGTGTTTGATAGTCTCAAGTCATTAAA 58.291 33.333 0.00 0.00 44.48 1.52
2709 2716 9.548208 GTTTGATAGTCTCAAGTCATTAAAAGC 57.452 33.333 0.00 0.00 44.48 3.51
2710 2717 8.846943 TTGATAGTCTCAAGTCATTAAAAGCA 57.153 30.769 0.00 0.00 38.97 3.91
2711 2718 9.453572 TTGATAGTCTCAAGTCATTAAAAGCAT 57.546 29.630 0.00 0.00 38.97 3.79
2712 2719 8.886719 TGATAGTCTCAAGTCATTAAAAGCATG 58.113 33.333 0.00 0.00 0.00 4.06
2713 2720 5.947443 AGTCTCAAGTCATTAAAAGCATGC 58.053 37.500 10.51 10.51 0.00 4.06
2714 2721 5.474532 AGTCTCAAGTCATTAAAAGCATGCA 59.525 36.000 21.98 0.00 0.00 3.96
2715 2722 5.570589 GTCTCAAGTCATTAAAAGCATGCAC 59.429 40.000 21.98 6.43 0.00 4.57
2716 2723 5.241285 TCTCAAGTCATTAAAAGCATGCACA 59.759 36.000 21.98 0.00 0.00 4.57
2717 2724 5.221880 TCAAGTCATTAAAAGCATGCACAC 58.778 37.500 21.98 4.04 0.00 3.82
2718 2725 4.178545 AGTCATTAAAAGCATGCACACC 57.821 40.909 21.98 0.00 0.00 4.16
2719 2726 3.056607 AGTCATTAAAAGCATGCACACCC 60.057 43.478 21.98 0.00 0.00 4.61
2720 2727 2.233431 TCATTAAAAGCATGCACACCCC 59.767 45.455 21.98 0.00 0.00 4.95
2721 2728 1.709578 TTAAAAGCATGCACACCCCA 58.290 45.000 21.98 0.00 0.00 4.96
2722 2729 0.965439 TAAAAGCATGCACACCCCAC 59.035 50.000 21.98 0.00 0.00 4.61
2723 2730 1.047596 AAAAGCATGCACACCCCACA 61.048 50.000 21.98 0.00 0.00 4.17
2724 2731 0.832983 AAAGCATGCACACCCCACAT 60.833 50.000 21.98 0.00 0.00 3.21
2725 2732 1.252904 AAGCATGCACACCCCACATC 61.253 55.000 21.98 0.00 0.00 3.06
2726 2733 1.679977 GCATGCACACCCCACATCT 60.680 57.895 14.21 0.00 0.00 2.90
2727 2734 1.660560 GCATGCACACCCCACATCTC 61.661 60.000 14.21 0.00 0.00 2.75
2728 2735 0.034767 CATGCACACCCCACATCTCT 60.035 55.000 0.00 0.00 0.00 3.10
2729 2736 0.700564 ATGCACACCCCACATCTCTT 59.299 50.000 0.00 0.00 0.00 2.85
2730 2737 1.357137 TGCACACCCCACATCTCTTA 58.643 50.000 0.00 0.00 0.00 2.10
2731 2738 1.915489 TGCACACCCCACATCTCTTAT 59.085 47.619 0.00 0.00 0.00 1.73
2732 2739 2.308570 TGCACACCCCACATCTCTTATT 59.691 45.455 0.00 0.00 0.00 1.40
2747 2754 9.685276 ACATCTCTTATTGGTTGATATGTCAAA 57.315 29.630 6.45 0.00 45.38 2.69
4459 5961 0.325296 ATTCCCCTCGCAGTACCTCA 60.325 55.000 0.00 0.00 0.00 3.86
5554 7139 6.554784 TGCTCATTTCCATATATGTTGGGAT 58.445 36.000 11.73 0.00 34.85 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.244249 GCAACTCTGGTAAGTTCTCCTGT 60.244 47.826 0.00 0.00 37.38 4.00
2 3 3.330267 GCAACTCTGGTAAGTTCTCCTG 58.670 50.000 0.00 0.00 37.38 3.86
3 4 2.028930 CGCAACTCTGGTAAGTTCTCCT 60.029 50.000 0.00 0.00 37.38 3.69
6 7 2.607282 CGTCGCAACTCTGGTAAGTTCT 60.607 50.000 0.00 0.00 37.38 3.01
7 8 1.719780 CGTCGCAACTCTGGTAAGTTC 59.280 52.381 0.00 0.00 37.38 3.01
8 9 1.604693 CCGTCGCAACTCTGGTAAGTT 60.605 52.381 0.00 0.00 40.08 2.66
9 10 0.038526 CCGTCGCAACTCTGGTAAGT 60.039 55.000 0.00 0.00 0.00 2.24
10 11 1.352156 GCCGTCGCAACTCTGGTAAG 61.352 60.000 0.00 0.00 34.03 2.34
11 12 1.373748 GCCGTCGCAACTCTGGTAA 60.374 57.895 0.00 0.00 34.03 2.85
12 13 2.260434 GCCGTCGCAACTCTGGTA 59.740 61.111 0.00 0.00 34.03 3.25
14 15 3.989698 ATCGCCGTCGCAACTCTGG 62.990 63.158 0.00 0.00 35.26 3.86
15 16 2.507102 ATCGCCGTCGCAACTCTG 60.507 61.111 0.00 0.00 35.26 3.35
16 17 2.507102 CATCGCCGTCGCAACTCT 60.507 61.111 0.00 0.00 35.26 3.24
17 18 2.506217 TCATCGCCGTCGCAACTC 60.506 61.111 0.00 0.00 35.26 3.01
18 19 2.507102 CTCATCGCCGTCGCAACT 60.507 61.111 0.00 0.00 35.26 3.16
19 20 2.506217 TCTCATCGCCGTCGCAAC 60.506 61.111 0.00 0.00 35.26 4.17
20 21 2.004808 ATCTCTCATCGCCGTCGCAA 62.005 55.000 0.00 0.00 35.26 4.85
21 22 2.393989 GATCTCTCATCGCCGTCGCA 62.394 60.000 0.00 0.00 35.26 5.10
22 23 1.727723 GATCTCTCATCGCCGTCGC 60.728 63.158 0.00 0.00 35.26 5.19
23 24 1.081774 GGATCTCTCATCGCCGTCG 60.082 63.158 0.00 0.00 0.00 5.12
24 25 1.081774 CGGATCTCTCATCGCCGTC 60.082 63.158 0.00 0.00 37.35 4.79
25 26 1.101635 TTCGGATCTCTCATCGCCGT 61.102 55.000 0.00 0.00 42.40 5.68
26 27 0.661780 GTTCGGATCTCTCATCGCCG 60.662 60.000 0.00 0.00 43.11 6.46
27 28 0.319125 GGTTCGGATCTCTCATCGCC 60.319 60.000 0.00 0.00 0.00 5.54
28 29 0.319125 GGGTTCGGATCTCTCATCGC 60.319 60.000 0.00 0.00 0.00 4.58
29 30 1.032794 TGGGTTCGGATCTCTCATCG 58.967 55.000 0.00 0.00 0.00 3.84
30 31 2.483889 GGTTGGGTTCGGATCTCTCATC 60.484 54.545 0.00 0.00 0.00 2.92
31 32 1.486726 GGTTGGGTTCGGATCTCTCAT 59.513 52.381 0.00 0.00 0.00 2.90
32 33 0.902531 GGTTGGGTTCGGATCTCTCA 59.097 55.000 0.00 0.00 0.00 3.27
33 34 0.902531 TGGTTGGGTTCGGATCTCTC 59.097 55.000 0.00 0.00 0.00 3.20
34 35 0.905357 CTGGTTGGGTTCGGATCTCT 59.095 55.000 0.00 0.00 0.00 3.10
35 36 0.744771 GCTGGTTGGGTTCGGATCTC 60.745 60.000 0.00 0.00 0.00 2.75
36 37 1.299976 GCTGGTTGGGTTCGGATCT 59.700 57.895 0.00 0.00 0.00 2.75
37 38 0.394352 ATGCTGGTTGGGTTCGGATC 60.394 55.000 0.00 0.00 0.00 3.36
38 39 0.916086 TATGCTGGTTGGGTTCGGAT 59.084 50.000 0.00 0.00 0.00 4.18
39 40 0.693622 TTATGCTGGTTGGGTTCGGA 59.306 50.000 0.00 0.00 0.00 4.55
40 41 1.094785 CTTATGCTGGTTGGGTTCGG 58.905 55.000 0.00 0.00 0.00 4.30
41 42 1.737793 GTCTTATGCTGGTTGGGTTCG 59.262 52.381 0.00 0.00 0.00 3.95
42 43 1.737793 CGTCTTATGCTGGTTGGGTTC 59.262 52.381 0.00 0.00 0.00 3.62
43 44 1.349688 TCGTCTTATGCTGGTTGGGTT 59.650 47.619 0.00 0.00 0.00 4.11
44 45 0.981183 TCGTCTTATGCTGGTTGGGT 59.019 50.000 0.00 0.00 0.00 4.51
45 46 1.369625 GTCGTCTTATGCTGGTTGGG 58.630 55.000 0.00 0.00 0.00 4.12
46 47 0.999406 CGTCGTCTTATGCTGGTTGG 59.001 55.000 0.00 0.00 0.00 3.77
47 48 0.999406 CCGTCGTCTTATGCTGGTTG 59.001 55.000 0.00 0.00 0.00 3.77
48 49 0.739813 GCCGTCGTCTTATGCTGGTT 60.740 55.000 0.00 0.00 0.00 3.67
49 50 1.153628 GCCGTCGTCTTATGCTGGT 60.154 57.895 0.00 0.00 0.00 4.00
50 51 2.230940 CGCCGTCGTCTTATGCTGG 61.231 63.158 0.00 0.00 0.00 4.85
51 52 1.226575 TCGCCGTCGTCTTATGCTG 60.227 57.895 0.00 0.00 36.96 4.41
52 53 1.226603 GTCGCCGTCGTCTTATGCT 60.227 57.895 0.00 0.00 36.96 3.79
53 54 2.565394 CGTCGCCGTCGTCTTATGC 61.565 63.158 0.00 0.00 36.96 3.14
54 55 1.937846 CCGTCGCCGTCGTCTTATG 60.938 63.158 2.78 0.00 36.96 1.90
55 56 2.406401 CCGTCGCCGTCGTCTTAT 59.594 61.111 2.78 0.00 36.96 1.73
56 57 4.465512 GCCGTCGCCGTCGTCTTA 62.466 66.667 2.78 0.00 36.96 2.10
87 88 4.660938 AGTTTGCGCCTGGGGGTC 62.661 66.667 13.07 0.00 34.45 4.46
88 89 4.218686 AAGTTTGCGCCTGGGGGT 62.219 61.111 13.07 0.00 34.45 4.95
89 90 3.683937 CAAGTTTGCGCCTGGGGG 61.684 66.667 13.07 2.93 0.00 5.40
90 91 4.362476 GCAAGTTTGCGCCTGGGG 62.362 66.667 4.18 6.36 45.11 4.96
99 100 3.737172 CCCGCTCCCGCAAGTTTG 61.737 66.667 0.00 0.00 35.30 2.93
119 120 3.672295 CTCCTTCTCCCACCGCTGC 62.672 68.421 0.00 0.00 0.00 5.25
120 121 2.581354 CTCCTTCTCCCACCGCTG 59.419 66.667 0.00 0.00 0.00 5.18
121 122 3.394836 GCTCCTTCTCCCACCGCT 61.395 66.667 0.00 0.00 0.00 5.52
122 123 4.475135 GGCTCCTTCTCCCACCGC 62.475 72.222 0.00 0.00 0.00 5.68
123 124 3.787001 GGGCTCCTTCTCCCACCG 61.787 72.222 0.00 0.00 42.18 4.94
124 125 3.787001 CGGGCTCCTTCTCCCACC 61.787 72.222 0.00 0.00 42.75 4.61
125 126 4.475135 GCGGGCTCCTTCTCCCAC 62.475 72.222 0.00 0.00 42.75 4.61
127 128 4.475135 GTGCGGGCTCCTTCTCCC 62.475 72.222 0.00 0.00 39.17 4.30
128 129 3.672295 CTGTGCGGGCTCCTTCTCC 62.672 68.421 0.00 0.00 0.00 3.71
129 130 2.125350 CTGTGCGGGCTCCTTCTC 60.125 66.667 0.00 0.00 0.00 2.87
130 131 3.710722 CCTGTGCGGGCTCCTTCT 61.711 66.667 0.00 0.00 0.00 2.85
131 132 3.254024 TTCCTGTGCGGGCTCCTTC 62.254 63.158 0.00 0.00 0.00 3.46
132 133 3.249189 TTCCTGTGCGGGCTCCTT 61.249 61.111 0.00 0.00 0.00 3.36
133 134 3.710722 CTTCCTGTGCGGGCTCCT 61.711 66.667 0.00 0.00 0.00 3.69
134 135 4.785453 CCTTCCTGTGCGGGCTCC 62.785 72.222 0.00 0.00 0.00 4.70
135 136 3.706373 TCCTTCCTGTGCGGGCTC 61.706 66.667 0.00 0.00 0.00 4.70
136 137 4.021925 GTCCTTCCTGTGCGGGCT 62.022 66.667 0.00 0.00 0.00 5.19
138 139 4.760047 CGGTCCTTCCTGTGCGGG 62.760 72.222 0.00 0.00 0.00 6.13
139 140 4.760047 CCGGTCCTTCCTGTGCGG 62.760 72.222 0.00 0.00 0.00 5.69
142 143 3.234630 TTCGCCGGTCCTTCCTGTG 62.235 63.158 1.90 0.00 33.23 3.66
143 144 2.920912 TTCGCCGGTCCTTCCTGT 60.921 61.111 1.90 0.00 0.00 4.00
144 145 2.125512 CTTCGCCGGTCCTTCCTG 60.126 66.667 1.90 0.00 0.00 3.86
145 146 3.391382 CCTTCGCCGGTCCTTCCT 61.391 66.667 1.90 0.00 0.00 3.36
155 156 3.191539 CTCTTGCTCGCCTTCGCC 61.192 66.667 0.00 0.00 35.26 5.54
156 157 3.191539 CCTCTTGCTCGCCTTCGC 61.192 66.667 0.00 0.00 35.26 4.70
157 158 3.191539 GCCTCTTGCTCGCCTTCG 61.192 66.667 0.00 0.00 36.87 3.79
158 159 2.821810 GGCCTCTTGCTCGCCTTC 60.822 66.667 0.00 0.00 39.70 3.46
159 160 4.767255 CGGCCTCTTGCTCGCCTT 62.767 66.667 0.00 0.00 40.70 4.35
173 174 4.933064 CTCGTCGGATGAGGCGGC 62.933 72.222 17.66 0.00 40.01 6.53
174 175 4.933064 GCTCGTCGGATGAGGCGG 62.933 72.222 24.53 4.85 40.01 6.13
175 176 2.960957 ATTGCTCGTCGGATGAGGCG 62.961 60.000 24.53 4.16 41.09 5.52
176 177 1.218230 GATTGCTCGTCGGATGAGGC 61.218 60.000 24.53 17.77 31.96 4.70
177 178 0.598680 GGATTGCTCGTCGGATGAGG 60.599 60.000 24.53 9.92 31.96 3.86
178 179 0.387202 AGGATTGCTCGTCGGATGAG 59.613 55.000 20.44 20.44 34.41 2.90
179 180 0.385751 GAGGATTGCTCGTCGGATGA 59.614 55.000 0.00 0.00 0.00 2.92
180 181 0.103026 TGAGGATTGCTCGTCGGATG 59.897 55.000 0.47 0.00 38.78 3.51
181 182 1.000283 GATGAGGATTGCTCGTCGGAT 60.000 52.381 11.08 0.00 38.78 4.18
182 183 0.385751 GATGAGGATTGCTCGTCGGA 59.614 55.000 11.08 0.00 38.78 4.55
183 184 2.892305 GATGAGGATTGCTCGTCGG 58.108 57.895 11.08 0.00 38.78 4.79
185 186 0.385751 TCCGATGAGGATTGCTCGTC 59.614 55.000 15.34 15.34 45.98 4.20
186 187 2.504920 TCCGATGAGGATTGCTCGT 58.495 52.632 0.00 0.00 45.98 4.18
196 197 2.725008 GCCCTCGACTCCGATGAG 59.275 66.667 0.00 0.00 44.62 2.90
197 198 2.833582 GGCCCTCGACTCCGATGA 60.834 66.667 0.00 0.00 44.62 2.92
198 199 3.917760 GGGCCCTCGACTCCGATG 61.918 72.222 17.04 0.00 44.62 3.84
199 200 3.976490 TTGGGCCCTCGACTCCGAT 62.976 63.158 25.70 0.00 44.62 4.18
200 201 4.689549 TTGGGCCCTCGACTCCGA 62.690 66.667 25.70 0.00 43.35 4.55
201 202 3.248446 TTTTGGGCCCTCGACTCCG 62.248 63.158 25.70 0.00 37.07 4.63
202 203 1.377333 CTTTTGGGCCCTCGACTCC 60.377 63.158 25.70 0.00 0.00 3.85
203 204 2.041115 GCTTTTGGGCCCTCGACTC 61.041 63.158 25.70 3.94 0.00 3.36
204 205 2.034221 GCTTTTGGGCCCTCGACT 59.966 61.111 25.70 0.00 0.00 4.18
205 206 3.431725 CGCTTTTGGGCCCTCGAC 61.432 66.667 25.70 7.85 0.00 4.20
206 207 3.605749 CTCGCTTTTGGGCCCTCGA 62.606 63.158 25.70 20.58 0.00 4.04
207 208 3.127533 CTCGCTTTTGGGCCCTCG 61.128 66.667 25.70 17.59 0.00 4.63
208 209 1.746991 CTCTCGCTTTTGGGCCCTC 60.747 63.158 25.70 5.92 0.00 4.30
209 210 2.352805 CTCTCGCTTTTGGGCCCT 59.647 61.111 25.70 0.00 0.00 5.19
210 211 3.443925 GCTCTCGCTTTTGGGCCC 61.444 66.667 17.59 17.59 0.00 5.80
211 212 3.443925 GGCTCTCGCTTTTGGGCC 61.444 66.667 0.00 0.00 36.09 5.80
212 213 2.205243 CTTGGCTCTCGCTTTTGGGC 62.205 60.000 0.00 0.00 36.09 5.36
213 214 0.890996 ACTTGGCTCTCGCTTTTGGG 60.891 55.000 0.00 0.00 36.09 4.12
214 215 0.239347 CACTTGGCTCTCGCTTTTGG 59.761 55.000 0.00 0.00 36.09 3.28
215 216 0.239347 CCACTTGGCTCTCGCTTTTG 59.761 55.000 0.00 0.00 36.09 2.44
216 217 2.633860 CCACTTGGCTCTCGCTTTT 58.366 52.632 0.00 0.00 36.09 2.27
217 218 4.386413 CCACTTGGCTCTCGCTTT 57.614 55.556 0.00 0.00 36.09 3.51
228 229 4.096003 ATCCCCCGACGCCACTTG 62.096 66.667 0.00 0.00 0.00 3.16
229 230 4.096003 CATCCCCCGACGCCACTT 62.096 66.667 0.00 0.00 0.00 3.16
231 232 4.530857 CTCATCCCCCGACGCCAC 62.531 72.222 0.00 0.00 0.00 5.01
238 239 2.513897 GTTTCGGCTCATCCCCCG 60.514 66.667 0.00 0.00 45.64 5.73
239 240 2.124278 GGTTTCGGCTCATCCCCC 60.124 66.667 0.00 0.00 0.00 5.40
240 241 2.124278 GGGTTTCGGCTCATCCCC 60.124 66.667 0.00 0.00 32.66 4.81
241 242 2.513897 CGGGTTTCGGCTCATCCC 60.514 66.667 0.00 0.00 34.75 3.85
242 243 2.106683 CACGGGTTTCGGCTCATCC 61.107 63.158 0.00 0.00 44.45 3.51
243 244 2.106683 CCACGGGTTTCGGCTCATC 61.107 63.158 0.00 0.00 44.45 2.92
244 245 2.046314 CCACGGGTTTCGGCTCAT 60.046 61.111 0.00 0.00 44.45 2.90
267 268 4.856607 CTCCCTCCGTTCGCTCGC 62.857 72.222 0.00 0.00 0.00 5.03
268 269 3.114647 CTCTCCCTCCGTTCGCTCG 62.115 68.421 0.00 0.00 0.00 5.03
269 270 2.776913 CCTCTCCCTCCGTTCGCTC 61.777 68.421 0.00 0.00 0.00 5.03
270 271 2.756283 CCTCTCCCTCCGTTCGCT 60.756 66.667 0.00 0.00 0.00 4.93
271 272 2.348888 TTCCTCTCCCTCCGTTCGC 61.349 63.158 0.00 0.00 0.00 4.70
272 273 1.511768 GTTCCTCTCCCTCCGTTCG 59.488 63.158 0.00 0.00 0.00 3.95
273 274 0.903454 TGGTTCCTCTCCCTCCGTTC 60.903 60.000 0.00 0.00 0.00 3.95
274 275 0.905337 CTGGTTCCTCTCCCTCCGTT 60.905 60.000 0.00 0.00 0.00 4.44
275 276 1.305381 CTGGTTCCTCTCCCTCCGT 60.305 63.158 0.00 0.00 0.00 4.69
276 277 1.000486 TCTGGTTCCTCTCCCTCCG 60.000 63.158 0.00 0.00 0.00 4.63
277 278 0.041982 AGTCTGGTTCCTCTCCCTCC 59.958 60.000 0.00 0.00 0.00 4.30
278 279 1.480789 GAGTCTGGTTCCTCTCCCTC 58.519 60.000 0.00 0.00 0.00 4.30
279 280 0.323908 CGAGTCTGGTTCCTCTCCCT 60.324 60.000 0.00 0.00 0.00 4.20
280 281 1.324005 CCGAGTCTGGTTCCTCTCCC 61.324 65.000 0.00 0.00 0.00 4.30
281 282 0.323542 TCCGAGTCTGGTTCCTCTCC 60.324 60.000 0.00 0.00 0.00 3.71
282 283 1.099689 CTCCGAGTCTGGTTCCTCTC 58.900 60.000 0.00 0.00 0.00 3.20
283 284 0.323908 CCTCCGAGTCTGGTTCCTCT 60.324 60.000 0.00 0.00 0.00 3.69
284 285 0.323542 TCCTCCGAGTCTGGTTCCTC 60.324 60.000 0.00 0.00 0.00 3.71
285 286 0.323908 CTCCTCCGAGTCTGGTTCCT 60.324 60.000 0.00 0.00 0.00 3.36
286 287 0.323542 TCTCCTCCGAGTCTGGTTCC 60.324 60.000 0.00 0.00 37.40 3.62
287 288 1.474879 CTTCTCCTCCGAGTCTGGTTC 59.525 57.143 0.00 0.00 37.40 3.62
288 289 1.551452 CTTCTCCTCCGAGTCTGGTT 58.449 55.000 0.00 0.00 37.40 3.67
289 290 0.323908 CCTTCTCCTCCGAGTCTGGT 60.324 60.000 0.00 0.00 37.40 4.00
290 291 1.671901 GCCTTCTCCTCCGAGTCTGG 61.672 65.000 0.00 0.00 37.40 3.86
291 292 0.967887 TGCCTTCTCCTCCGAGTCTG 60.968 60.000 0.00 0.00 37.40 3.51
292 293 0.682855 CTGCCTTCTCCTCCGAGTCT 60.683 60.000 0.00 0.00 37.40 3.24
293 294 0.681564 TCTGCCTTCTCCTCCGAGTC 60.682 60.000 0.00 0.00 37.40 3.36
294 295 0.968393 GTCTGCCTTCTCCTCCGAGT 60.968 60.000 0.00 0.00 37.40 4.18
295 296 1.671901 GGTCTGCCTTCTCCTCCGAG 61.672 65.000 0.00 0.00 37.48 4.63
296 297 1.682684 GGTCTGCCTTCTCCTCCGA 60.683 63.158 0.00 0.00 0.00 4.55
297 298 2.896443 GGTCTGCCTTCTCCTCCG 59.104 66.667 0.00 0.00 0.00 4.63
298 299 2.726351 CCGGTCTGCCTTCTCCTCC 61.726 68.421 0.00 0.00 0.00 4.30
299 300 1.671901 CTCCGGTCTGCCTTCTCCTC 61.672 65.000 0.00 0.00 0.00 3.71
300 301 1.684049 CTCCGGTCTGCCTTCTCCT 60.684 63.158 0.00 0.00 0.00 3.69
301 302 2.726351 CCTCCGGTCTGCCTTCTCC 61.726 68.421 0.00 0.00 0.00 3.71
302 303 1.671901 CTCCTCCGGTCTGCCTTCTC 61.672 65.000 0.00 0.00 0.00 2.87
303 304 1.684049 CTCCTCCGGTCTGCCTTCT 60.684 63.158 0.00 0.00 0.00 2.85
304 305 2.896443 CTCCTCCGGTCTGCCTTC 59.104 66.667 0.00 0.00 0.00 3.46
305 306 3.394836 GCTCCTCCGGTCTGCCTT 61.395 66.667 0.00 0.00 0.00 4.35
306 307 4.704103 TGCTCCTCCGGTCTGCCT 62.704 66.667 0.00 0.00 0.00 4.75
307 308 3.672295 CTTGCTCCTCCGGTCTGCC 62.672 68.421 0.00 0.00 0.00 4.85
308 309 2.125350 CTTGCTCCTCCGGTCTGC 60.125 66.667 0.00 2.82 0.00 4.26
309 310 1.544825 TTCCTTGCTCCTCCGGTCTG 61.545 60.000 0.00 0.00 0.00 3.51
310 311 1.229209 TTCCTTGCTCCTCCGGTCT 60.229 57.895 0.00 0.00 0.00 3.85
311 312 1.079057 GTTCCTTGCTCCTCCGGTC 60.079 63.158 0.00 0.00 0.00 4.79
312 313 2.943978 CGTTCCTTGCTCCTCCGGT 61.944 63.158 0.00 0.00 0.00 5.28
313 314 2.125512 CGTTCCTTGCTCCTCCGG 60.126 66.667 0.00 0.00 0.00 5.14
314 315 2.125512 CCGTTCCTTGCTCCTCCG 60.126 66.667 0.00 0.00 0.00 4.63
315 316 2.436824 GCCGTTCCTTGCTCCTCC 60.437 66.667 0.00 0.00 0.00 4.30
316 317 2.815647 CGCCGTTCCTTGCTCCTC 60.816 66.667 0.00 0.00 0.00 3.71
317 318 4.394712 CCGCCGTTCCTTGCTCCT 62.395 66.667 0.00 0.00 0.00 3.69
335 336 4.558884 CCCTCCCCTACCCCTCCG 62.559 77.778 0.00 0.00 0.00 4.63
336 337 4.188511 CCCCTCCCCTACCCCTCC 62.189 77.778 0.00 0.00 0.00 4.30
337 338 4.188511 CCCCCTCCCCTACCCCTC 62.189 77.778 0.00 0.00 0.00 4.30
338 339 4.773222 TCCCCCTCCCCTACCCCT 62.773 72.222 0.00 0.00 0.00 4.79
339 340 4.188511 CTCCCCCTCCCCTACCCC 62.189 77.778 0.00 0.00 0.00 4.95
340 341 4.188511 CCTCCCCCTCCCCTACCC 62.189 77.778 0.00 0.00 0.00 3.69
341 342 3.040814 TCCTCCCCCTCCCCTACC 61.041 72.222 0.00 0.00 0.00 3.18
342 343 2.019272 TCTCCTCCCCCTCCCCTAC 61.019 68.421 0.00 0.00 0.00 3.18
343 344 1.705450 CTCTCCTCCCCCTCCCCTA 60.705 68.421 0.00 0.00 0.00 3.53
344 345 3.039526 CTCTCCTCCCCCTCCCCT 61.040 72.222 0.00 0.00 0.00 4.79
345 346 4.179599 CCTCTCCTCCCCCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
346 347 4.179599 CCCTCTCCTCCCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
347 348 4.179599 CCCCTCTCCTCCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
348 349 4.890306 GCCCCTCTCCTCCCCCTC 62.890 77.778 0.00 0.00 0.00 4.30
352 353 4.144727 TCTCGCCCCTCTCCTCCC 62.145 72.222 0.00 0.00 0.00 4.30
353 354 2.520741 CTCTCGCCCCTCTCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
354 355 2.520741 CCTCTCGCCCCTCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
355 356 4.150454 CCCTCTCGCCCCTCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
371 372 1.841103 GATGCCTCTCCTCTCCCCC 60.841 68.421 0.00 0.00 0.00 5.40
372 373 1.074926 TGATGCCTCTCCTCTCCCC 60.075 63.158 0.00 0.00 0.00 4.81
373 374 1.406860 GGTGATGCCTCTCCTCTCCC 61.407 65.000 3.14 0.00 33.16 4.30
374 375 1.743321 CGGTGATGCCTCTCCTCTCC 61.743 65.000 8.23 0.00 33.66 3.71
375 376 1.739049 CGGTGATGCCTCTCCTCTC 59.261 63.158 8.23 0.00 33.66 3.20
376 377 1.760086 CCGGTGATGCCTCTCCTCT 60.760 63.158 8.23 0.00 33.66 3.69
377 378 1.118356 ATCCGGTGATGCCTCTCCTC 61.118 60.000 0.00 0.00 33.66 3.71
378 379 1.074926 ATCCGGTGATGCCTCTCCT 60.075 57.895 0.00 0.00 33.66 3.69
379 380 1.369321 GATCCGGTGATGCCTCTCC 59.631 63.158 0.00 0.39 34.25 3.71
380 381 0.249657 GTGATCCGGTGATGCCTCTC 60.250 60.000 0.00 0.00 34.25 3.20
381 382 1.826024 GTGATCCGGTGATGCCTCT 59.174 57.895 0.00 0.00 34.25 3.69
382 383 1.592669 CGTGATCCGGTGATGCCTC 60.593 63.158 0.00 0.00 34.25 4.70
383 384 1.899437 AACGTGATCCGGTGATGCCT 61.899 55.000 0.00 0.00 42.24 4.75
384 385 1.024579 AAACGTGATCCGGTGATGCC 61.025 55.000 0.00 0.00 42.24 4.40
385 386 0.802494 AAAACGTGATCCGGTGATGC 59.198 50.000 0.00 0.00 42.24 3.91
386 387 2.742053 AGAAAAACGTGATCCGGTGATG 59.258 45.455 0.00 0.00 42.24 3.07
387 388 3.000727 GAGAAAAACGTGATCCGGTGAT 58.999 45.455 0.00 0.00 42.24 3.06
388 389 2.409975 GAGAAAAACGTGATCCGGTGA 58.590 47.619 0.00 0.00 42.24 4.02
389 390 1.463444 GGAGAAAAACGTGATCCGGTG 59.537 52.381 0.00 0.00 42.24 4.94
390 391 1.346722 AGGAGAAAAACGTGATCCGGT 59.653 47.619 0.00 0.00 42.24 5.28
391 392 2.094762 AGGAGAAAAACGTGATCCGG 57.905 50.000 0.00 0.00 42.24 5.14
392 393 2.412847 GCAAGGAGAAAAACGTGATCCG 60.413 50.000 0.00 2.55 44.03 4.18
393 394 2.552315 TGCAAGGAGAAAAACGTGATCC 59.448 45.455 0.00 0.00 0.00 3.36
394 395 3.555518 GTGCAAGGAGAAAAACGTGATC 58.444 45.455 0.00 0.00 0.00 2.92
395 396 2.032030 CGTGCAAGGAGAAAAACGTGAT 60.032 45.455 0.00 0.00 0.00 3.06
396 397 1.329292 CGTGCAAGGAGAAAAACGTGA 59.671 47.619 0.00 0.00 0.00 4.35
397 398 1.063469 ACGTGCAAGGAGAAAAACGTG 59.937 47.619 4.26 0.00 42.13 4.49
398 399 1.375551 ACGTGCAAGGAGAAAAACGT 58.624 45.000 4.26 0.00 39.24 3.99
399 400 2.349155 GGTACGTGCAAGGAGAAAAACG 60.349 50.000 5.86 0.00 37.09 3.60
400 401 2.876550 AGGTACGTGCAAGGAGAAAAAC 59.123 45.455 5.86 0.00 0.00 2.43
401 402 3.135994 GAGGTACGTGCAAGGAGAAAAA 58.864 45.455 5.86 0.00 0.00 1.94
402 403 2.762745 GAGGTACGTGCAAGGAGAAAA 58.237 47.619 5.86 0.00 0.00 2.29
403 404 1.336517 CGAGGTACGTGCAAGGAGAAA 60.337 52.381 5.86 0.00 37.22 2.52
404 405 0.242825 CGAGGTACGTGCAAGGAGAA 59.757 55.000 5.86 0.00 37.22 2.87
405 406 1.880894 CGAGGTACGTGCAAGGAGA 59.119 57.895 5.86 0.00 37.22 3.71
406 407 4.478195 CGAGGTACGTGCAAGGAG 57.522 61.111 5.86 0.00 37.22 3.69
416 417 3.587797 TGTGGAAGAATCACGAGGTAC 57.412 47.619 0.00 0.00 37.91 3.34
417 418 4.610605 TTTGTGGAAGAATCACGAGGTA 57.389 40.909 0.00 0.00 37.91 3.08
423 424 5.984926 TGCTTCATTTTTGTGGAAGAATCAC 59.015 36.000 4.91 0.00 40.28 3.06
491 492 4.022935 CAGCAGCCATCTTACTGTTTTTCA 60.023 41.667 0.00 0.00 36.26 2.69
523 524 1.064314 AGACGAGTATGAGGCTCCTGT 60.064 52.381 12.86 0.54 0.00 4.00
525 526 2.303175 GAAGACGAGTATGAGGCTCCT 58.697 52.381 12.86 4.55 0.00 3.69
596 599 6.396450 CATCAGTATATCATAGCACTGCTGT 58.604 40.000 14.15 3.85 40.10 4.40
624 627 1.605710 GTGCAGTGTGCTCTGAAACAT 59.394 47.619 5.56 0.00 45.31 2.71
843 850 5.643348 TGCAATAGGTCTGCCATTATATTCG 59.357 40.000 0.00 0.00 39.13 3.34
851 858 2.101917 GCAAATGCAATAGGTCTGCCAT 59.898 45.455 0.00 0.00 39.13 4.40
919 926 8.428186 TTTGGAGCCTAAAAATAGTACGTATG 57.572 34.615 0.00 0.00 0.00 2.39
920 927 8.886719 GTTTTGGAGCCTAAAAATAGTACGTAT 58.113 33.333 0.00 0.00 0.00 3.06
921 928 8.096414 AGTTTTGGAGCCTAAAAATAGTACGTA 58.904 33.333 0.00 0.00 0.00 3.57
922 929 6.938596 AGTTTTGGAGCCTAAAAATAGTACGT 59.061 34.615 0.00 0.00 0.00 3.57
1043 1050 3.304829 GAGGTCAGAGCCTTTCCTCTAT 58.695 50.000 0.00 0.00 40.11 1.98
1499 1506 2.111251 GGATAGGGCCGGTGAAGC 59.889 66.667 1.90 0.00 0.00 3.86
1764 1771 2.979120 GGGTTACCGGCAAACGCA 60.979 61.111 24.04 0.00 42.52 5.24
1868 1875 3.832492 TCATCGGCGGCATCGACA 61.832 61.111 10.53 0.00 46.65 4.35
2161 2168 4.903010 GACGGCACCACCACGTGT 62.903 66.667 15.65 0.00 41.40 4.49
2177 2184 4.812476 CGTCCATCCGCTTGCCGA 62.812 66.667 0.00 0.00 40.02 5.54
2358 2365 4.388499 TCAAACTCCTCGCGGCCC 62.388 66.667 6.13 0.00 0.00 5.80
2373 2380 3.923864 ACGCGCAGGTGGTTCTCA 61.924 61.111 5.73 0.00 0.00 3.27
2403 2410 3.731766 AAGCAAGTTGGGGTGGCGT 62.732 57.895 4.75 0.00 0.00 5.68
2416 2423 4.722700 GCCGAGGGGAGCAAGCAA 62.723 66.667 0.00 0.00 34.06 3.91
2421 2428 3.696518 ATGGTAGCCGAGGGGAGCA 62.697 63.158 0.00 0.00 34.06 4.26
2499 2506 2.662309 GGTCTTACCGTGGAGGACA 58.338 57.895 0.00 0.00 45.00 4.02
2545 2552 4.713814 TCACCTAGACGGAGAGAGTAAGTA 59.286 45.833 0.00 0.00 36.31 2.24
2546 2553 3.518705 TCACCTAGACGGAGAGAGTAAGT 59.481 47.826 0.00 0.00 36.31 2.24
2547 2554 4.139859 TCACCTAGACGGAGAGAGTAAG 57.860 50.000 0.00 0.00 36.31 2.34
2554 2561 3.262660 TGACTTACTCACCTAGACGGAGA 59.737 47.826 10.87 0.00 36.31 3.71
2556 2563 3.708403 TGACTTACTCACCTAGACGGA 57.292 47.619 0.00 0.00 36.31 4.69
2557 2564 4.200874 AGATGACTTACTCACCTAGACGG 58.799 47.826 0.00 0.00 39.35 4.79
2558 2565 5.821516 AAGATGACTTACTCACCTAGACG 57.178 43.478 0.00 0.00 34.28 4.18
2559 2566 6.829811 ACCTAAGATGACTTACTCACCTAGAC 59.170 42.308 0.00 0.00 37.53 2.59
2560 2567 6.971340 ACCTAAGATGACTTACTCACCTAGA 58.029 40.000 0.00 0.00 37.53 2.43
2561 2568 7.122948 ACAACCTAAGATGACTTACTCACCTAG 59.877 40.741 0.00 0.00 37.53 3.02
2562 2569 6.952358 ACAACCTAAGATGACTTACTCACCTA 59.048 38.462 0.00 0.00 37.53 3.08
2563 2570 5.780793 ACAACCTAAGATGACTTACTCACCT 59.219 40.000 0.00 0.00 37.53 4.00
2564 2571 5.869888 CACAACCTAAGATGACTTACTCACC 59.130 44.000 0.00 0.00 37.53 4.02
2565 2572 5.348997 GCACAACCTAAGATGACTTACTCAC 59.651 44.000 0.00 0.00 37.53 3.51
2566 2573 5.011635 TGCACAACCTAAGATGACTTACTCA 59.988 40.000 0.00 0.00 37.53 3.41
2567 2574 5.348997 GTGCACAACCTAAGATGACTTACTC 59.651 44.000 13.17 0.00 37.53 2.59
2568 2575 5.238583 GTGCACAACCTAAGATGACTTACT 58.761 41.667 13.17 0.00 37.53 2.24
2569 2576 4.392138 GGTGCACAACCTAAGATGACTTAC 59.608 45.833 20.43 0.00 46.55 2.34
2570 2577 4.575885 GGTGCACAACCTAAGATGACTTA 58.424 43.478 20.43 0.00 46.55 2.24
2571 2578 3.412386 GGTGCACAACCTAAGATGACTT 58.588 45.455 20.43 0.00 46.55 3.01
2572 2579 3.059352 GGTGCACAACCTAAGATGACT 57.941 47.619 20.43 0.00 46.55 3.41
2582 2589 2.115911 TTGGTCACGGTGCACAACC 61.116 57.895 20.43 18.91 46.60 3.77
2583 2590 1.063488 GTTGGTCACGGTGCACAAC 59.937 57.895 20.43 22.43 35.28 3.32
2584 2591 2.465299 CGTTGGTCACGGTGCACAA 61.465 57.895 20.43 8.11 45.89 3.33
2585 2592 2.892914 CGTTGGTCACGGTGCACA 60.893 61.111 20.43 1.81 45.89 4.57
2593 2600 0.966920 TTCCTCTCCTCGTTGGTCAC 59.033 55.000 0.00 0.00 37.07 3.67
2594 2601 1.712056 TTTCCTCTCCTCGTTGGTCA 58.288 50.000 0.00 0.00 37.07 4.02
2595 2602 2.414806 GTTTTCCTCTCCTCGTTGGTC 58.585 52.381 0.00 0.00 37.07 4.02
2596 2603 1.270147 CGTTTTCCTCTCCTCGTTGGT 60.270 52.381 0.00 0.00 37.07 3.67
2597 2604 1.000506 TCGTTTTCCTCTCCTCGTTGG 59.999 52.381 0.00 0.00 37.10 3.77
2598 2605 2.030185 TCTCGTTTTCCTCTCCTCGTTG 60.030 50.000 0.00 0.00 0.00 4.10
2599 2606 2.229302 CTCTCGTTTTCCTCTCCTCGTT 59.771 50.000 0.00 0.00 0.00 3.85
2600 2607 1.813786 CTCTCGTTTTCCTCTCCTCGT 59.186 52.381 0.00 0.00 0.00 4.18
2601 2608 2.085320 TCTCTCGTTTTCCTCTCCTCG 58.915 52.381 0.00 0.00 0.00 4.63
2602 2609 3.508402 AGTTCTCTCGTTTTCCTCTCCTC 59.492 47.826 0.00 0.00 0.00 3.71
2603 2610 3.502356 AGTTCTCTCGTTTTCCTCTCCT 58.498 45.455 0.00 0.00 0.00 3.69
2604 2611 3.945981 AGTTCTCTCGTTTTCCTCTCC 57.054 47.619 0.00 0.00 0.00 3.71
2605 2612 6.869388 ACATTAAGTTCTCTCGTTTTCCTCTC 59.131 38.462 0.00 0.00 0.00 3.20
2606 2613 6.760291 ACATTAAGTTCTCTCGTTTTCCTCT 58.240 36.000 0.00 0.00 0.00 3.69
2607 2614 7.422878 AACATTAAGTTCTCTCGTTTTCCTC 57.577 36.000 0.00 0.00 34.74 3.71
2650 2657 4.221262 AGTGGTTAGTTCATTGCATGCAAT 59.779 37.500 34.78 34.78 46.35 3.56
2651 2658 3.573538 AGTGGTTAGTTCATTGCATGCAA 59.426 39.130 33.57 33.57 40.47 4.08
2652 2659 3.057386 CAGTGGTTAGTTCATTGCATGCA 60.057 43.478 18.46 18.46 0.00 3.96
2653 2660 3.504863 CAGTGGTTAGTTCATTGCATGC 58.495 45.455 11.82 11.82 0.00 4.06
2654 2661 3.504863 GCAGTGGTTAGTTCATTGCATG 58.495 45.455 6.68 0.00 44.01 4.06
2655 2662 3.855689 GCAGTGGTTAGTTCATTGCAT 57.144 42.857 6.68 0.00 44.01 3.96
2657 2664 3.057315 ACATGCAGTGGTTAGTTCATTGC 60.057 43.478 0.00 4.92 44.56 3.56
2658 2665 4.669965 CGACATGCAGTGGTTAGTTCATTG 60.670 45.833 0.00 0.00 0.00 2.82
2659 2666 3.436704 CGACATGCAGTGGTTAGTTCATT 59.563 43.478 0.00 0.00 0.00 2.57
2660 2667 3.002791 CGACATGCAGTGGTTAGTTCAT 58.997 45.455 0.00 0.00 0.00 2.57
2661 2668 2.224185 ACGACATGCAGTGGTTAGTTCA 60.224 45.455 0.00 0.00 35.47 3.18
2662 2669 2.157668 CACGACATGCAGTGGTTAGTTC 59.842 50.000 11.93 0.00 37.03 3.01
2663 2670 2.143122 CACGACATGCAGTGGTTAGTT 58.857 47.619 11.93 0.00 37.03 2.24
2664 2671 1.070134 ACACGACATGCAGTGGTTAGT 59.930 47.619 20.60 1.96 42.25 2.24
2665 2672 1.795768 ACACGACATGCAGTGGTTAG 58.204 50.000 20.60 1.38 42.25 2.34
2666 2673 2.248280 AACACGACATGCAGTGGTTA 57.752 45.000 20.60 0.00 42.25 2.85
2667 2674 1.388547 AAACACGACATGCAGTGGTT 58.611 45.000 20.60 18.36 42.73 3.67
2668 2675 0.662619 CAAACACGACATGCAGTGGT 59.337 50.000 20.60 14.15 42.25 4.16
2669 2676 0.943673 TCAAACACGACATGCAGTGG 59.056 50.000 20.60 7.50 42.25 4.00
2670 2677 2.975410 ATCAAACACGACATGCAGTG 57.025 45.000 16.62 16.62 43.46 3.66
2671 2678 3.664107 ACTATCAAACACGACATGCAGT 58.336 40.909 0.00 0.00 0.00 4.40
2672 2679 3.928992 AGACTATCAAACACGACATGCAG 59.071 43.478 0.00 0.00 0.00 4.41
2673 2680 3.925379 AGACTATCAAACACGACATGCA 58.075 40.909 0.00 0.00 0.00 3.96
2674 2681 3.926527 TGAGACTATCAAACACGACATGC 59.073 43.478 0.00 0.00 34.02 4.06
2685 2692 8.846943 TGCTTTTAATGACTTGAGACTATCAA 57.153 30.769 0.00 0.00 45.79 2.57
2686 2693 8.886719 CATGCTTTTAATGACTTGAGACTATCA 58.113 33.333 0.00 0.00 35.62 2.15
2687 2694 7.854916 GCATGCTTTTAATGACTTGAGACTATC 59.145 37.037 11.37 0.00 0.00 2.08
2688 2695 7.337689 TGCATGCTTTTAATGACTTGAGACTAT 59.662 33.333 20.33 0.00 0.00 2.12
2689 2696 6.654582 TGCATGCTTTTAATGACTTGAGACTA 59.345 34.615 20.33 0.00 0.00 2.59
2690 2697 5.474532 TGCATGCTTTTAATGACTTGAGACT 59.525 36.000 20.33 0.00 0.00 3.24
2691 2698 5.570589 GTGCATGCTTTTAATGACTTGAGAC 59.429 40.000 20.33 0.00 0.00 3.36
2692 2699 5.241285 TGTGCATGCTTTTAATGACTTGAGA 59.759 36.000 20.33 0.00 0.00 3.27
2693 2700 5.344128 GTGTGCATGCTTTTAATGACTTGAG 59.656 40.000 20.33 0.00 0.00 3.02
2694 2701 5.221880 GTGTGCATGCTTTTAATGACTTGA 58.778 37.500 20.33 0.00 0.00 3.02
2695 2702 4.386652 GGTGTGCATGCTTTTAATGACTTG 59.613 41.667 20.33 0.00 0.00 3.16
2696 2703 4.559153 GGTGTGCATGCTTTTAATGACTT 58.441 39.130 20.33 0.00 0.00 3.01
2697 2704 3.056607 GGGTGTGCATGCTTTTAATGACT 60.057 43.478 20.33 0.00 0.00 3.41
2698 2705 3.253230 GGGTGTGCATGCTTTTAATGAC 58.747 45.455 20.33 6.41 0.00 3.06
2699 2706 2.233431 GGGGTGTGCATGCTTTTAATGA 59.767 45.455 20.33 0.00 0.00 2.57
2700 2707 2.028294 TGGGGTGTGCATGCTTTTAATG 60.028 45.455 20.33 0.00 0.00 1.90
2701 2708 2.028203 GTGGGGTGTGCATGCTTTTAAT 60.028 45.455 20.33 0.00 0.00 1.40
2702 2709 1.342819 GTGGGGTGTGCATGCTTTTAA 59.657 47.619 20.33 0.00 0.00 1.52
2703 2710 0.965439 GTGGGGTGTGCATGCTTTTA 59.035 50.000 20.33 0.00 0.00 1.52
2704 2711 1.047596 TGTGGGGTGTGCATGCTTTT 61.048 50.000 20.33 0.00 0.00 2.27
2705 2712 0.832983 ATGTGGGGTGTGCATGCTTT 60.833 50.000 20.33 0.00 0.00 3.51
2706 2713 1.228956 ATGTGGGGTGTGCATGCTT 60.229 52.632 20.33 0.00 0.00 3.91
2707 2714 1.679977 GATGTGGGGTGTGCATGCT 60.680 57.895 20.33 0.00 0.00 3.79
2708 2715 1.660560 GAGATGTGGGGTGTGCATGC 61.661 60.000 11.82 11.82 0.00 4.06
2709 2716 0.034767 AGAGATGTGGGGTGTGCATG 60.035 55.000 0.00 0.00 0.00 4.06
2710 2717 0.700564 AAGAGATGTGGGGTGTGCAT 59.299 50.000 0.00 0.00 0.00 3.96
2711 2718 1.357137 TAAGAGATGTGGGGTGTGCA 58.643 50.000 0.00 0.00 0.00 4.57
2712 2719 2.684881 CAATAAGAGATGTGGGGTGTGC 59.315 50.000 0.00 0.00 0.00 4.57
2713 2720 3.282021 CCAATAAGAGATGTGGGGTGTG 58.718 50.000 0.00 0.00 0.00 3.82
2714 2721 2.919602 ACCAATAAGAGATGTGGGGTGT 59.080 45.455 0.00 0.00 35.32 4.16
2715 2722 3.652057 ACCAATAAGAGATGTGGGGTG 57.348 47.619 0.00 0.00 35.32 4.61
2716 2723 3.591527 TCAACCAATAAGAGATGTGGGGT 59.408 43.478 0.00 0.00 35.32 4.95
2717 2724 4.235079 TCAACCAATAAGAGATGTGGGG 57.765 45.455 0.00 0.00 35.32 4.96
2718 2725 7.000472 ACATATCAACCAATAAGAGATGTGGG 59.000 38.462 0.00 0.00 41.18 4.61
2719 2726 7.716560 TGACATATCAACCAATAAGAGATGTGG 59.283 37.037 6.64 0.00 42.33 4.17
2720 2727 8.667076 TGACATATCAACCAATAAGAGATGTG 57.333 34.615 6.64 0.00 42.33 3.21
2721 2728 9.685276 TTTGACATATCAACCAATAAGAGATGT 57.315 29.630 0.00 0.00 44.66 3.06
4150 5652 4.210304 GCTCACGAACCGCATCGC 62.210 66.667 7.83 0.00 46.51 4.58
5554 7139 5.658190 GGGCGGGTCATACCTAATAGTTATA 59.342 44.000 0.00 0.00 38.64 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.