Multiple sequence alignment - TraesCS4B01G139600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G139600 | chr4B | 100.000 | 4869 | 0 | 0 | 1 | 4869 | 183680663 | 183675795 | 0.000000e+00 | 8992.0 |
1 | TraesCS4B01G139600 | chr4B | 88.606 | 746 | 50 | 12 | 1364 | 2106 | 270533016 | 270532303 | 0.000000e+00 | 874.0 |
2 | TraesCS4B01G139600 | chr4B | 87.255 | 510 | 41 | 6 | 1364 | 1871 | 270736148 | 270735661 | 1.180000e-155 | 560.0 |
3 | TraesCS4B01G139600 | chr4B | 90.000 | 240 | 19 | 2 | 1867 | 2106 | 270692621 | 270692387 | 6.120000e-79 | 305.0 |
4 | TraesCS4B01G139600 | chr4B | 98.958 | 96 | 1 | 0 | 4774 | 4869 | 183673238 | 183673333 | 6.480000e-39 | 172.0 |
5 | TraesCS4B01G139600 | chr4B | 97.938 | 97 | 2 | 0 | 4773 | 4869 | 602889305 | 602889209 | 8.380000e-38 | 169.0 |
6 | TraesCS4B01G139600 | chr4B | 95.918 | 98 | 4 | 0 | 4772 | 4869 | 602883932 | 602884029 | 5.040000e-35 | 159.0 |
7 | TraesCS4B01G139600 | chr4A | 94.153 | 2651 | 96 | 29 | 726 | 3352 | 452598774 | 452596159 | 0.000000e+00 | 3982.0 |
8 | TraesCS4B01G139600 | chr4A | 93.763 | 978 | 39 | 13 | 3380 | 4343 | 452596163 | 452595194 | 0.000000e+00 | 1448.0 |
9 | TraesCS4B01G139600 | chr4A | 91.628 | 430 | 14 | 8 | 4351 | 4771 | 452595219 | 452594803 | 4.230000e-160 | 575.0 |
10 | TraesCS4B01G139600 | chr4D | 95.765 | 1889 | 61 | 7 | 2460 | 4333 | 121076954 | 121075070 | 0.000000e+00 | 3027.0 |
11 | TraesCS4B01G139600 | chr4D | 93.852 | 1952 | 68 | 29 | 545 | 2467 | 121078923 | 121076995 | 0.000000e+00 | 2892.0 |
12 | TraesCS4B01G139600 | chr4D | 86.649 | 382 | 15 | 4 | 4399 | 4771 | 121074986 | 121074632 | 1.640000e-104 | 390.0 |
13 | TraesCS4B01G139600 | chr4D | 86.770 | 257 | 25 | 1 | 281 | 528 | 121079362 | 121079106 | 1.330000e-70 | 278.0 |
14 | TraesCS4B01G139600 | chr3A | 84.510 | 439 | 47 | 9 | 1786 | 2222 | 16017573 | 16017154 | 9.750000e-112 | 414.0 |
15 | TraesCS4B01G139600 | chr2B | 90.299 | 268 | 19 | 4 | 2586 | 2849 | 105376482 | 105376218 | 1.300000e-90 | 344.0 |
16 | TraesCS4B01G139600 | chr2B | 90.385 | 52 | 5 | 0 | 10 | 61 | 38736428 | 38736377 | 8.740000e-08 | 69.4 |
17 | TraesCS4B01G139600 | chr2A | 90.244 | 246 | 20 | 4 | 1580 | 1824 | 752416445 | 752416203 | 7.860000e-83 | 318.0 |
18 | TraesCS4B01G139600 | chr2A | 98.969 | 97 | 1 | 0 | 4773 | 4869 | 757960595 | 757960499 | 1.800000e-39 | 174.0 |
19 | TraesCS4B01G139600 | chr2A | 97.938 | 97 | 1 | 1 | 4773 | 4869 | 757957940 | 757958035 | 3.010000e-37 | 167.0 |
20 | TraesCS4B01G139600 | chr1A | 90.244 | 246 | 21 | 3 | 1580 | 1824 | 557969670 | 557969427 | 7.860000e-83 | 318.0 |
21 | TraesCS4B01G139600 | chr5A | 100.000 | 97 | 0 | 0 | 4773 | 4869 | 423046850 | 423046754 | 3.870000e-41 | 180.0 |
22 | TraesCS4B01G139600 | chr5A | 95.146 | 103 | 3 | 2 | 4767 | 4869 | 423044189 | 423044289 | 1.400000e-35 | 161.0 |
23 | TraesCS4B01G139600 | chr6B | 98.969 | 97 | 1 | 0 | 4773 | 4869 | 93432494 | 93432590 | 1.800000e-39 | 174.0 |
24 | TraesCS4B01G139600 | chr7B | 97.938 | 97 | 2 | 0 | 4773 | 4869 | 2750831 | 2750927 | 8.380000e-38 | 169.0 |
25 | TraesCS4B01G139600 | chr2D | 85.965 | 57 | 8 | 0 | 8 | 64 | 607650937 | 607650993 | 1.460000e-05 | 62.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G139600 | chr4B | 183675795 | 183680663 | 4868 | True | 8992.000000 | 8992 | 100.000000 | 1 | 4869 | 1 | chr4B.!!$R1 | 4868 |
1 | TraesCS4B01G139600 | chr4B | 270532303 | 270533016 | 713 | True | 874.000000 | 874 | 88.606000 | 1364 | 2106 | 1 | chr4B.!!$R2 | 742 |
2 | TraesCS4B01G139600 | chr4A | 452594803 | 452598774 | 3971 | True | 2001.666667 | 3982 | 93.181333 | 726 | 4771 | 3 | chr4A.!!$R1 | 4045 |
3 | TraesCS4B01G139600 | chr4D | 121074632 | 121079362 | 4730 | True | 1646.750000 | 3027 | 90.759000 | 281 | 4771 | 4 | chr4D.!!$R1 | 4490 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
149 | 150 | 0.175760 | TCTAGCTGCCAATGTCGGTC | 59.824 | 55.000 | 0.0 | 0.0 | 0.00 | 4.79 | F |
307 | 308 | 0.177141 | TGGGTCGGAATCGGATGTTC | 59.823 | 55.000 | 0.0 | 0.0 | 36.95 | 3.18 | F |
893 | 1103 | 0.196118 | TTCCCCCTTCCTTCCTCTGT | 59.804 | 55.000 | 0.0 | 0.0 | 0.00 | 3.41 | F |
894 | 1104 | 0.252742 | TCCCCCTTCCTTCCTCTGTC | 60.253 | 60.000 | 0.0 | 0.0 | 0.00 | 3.51 | F |
1686 | 1908 | 0.465460 | TTGTTGTGCCTGACCACCTC | 60.465 | 55.000 | 0.0 | 0.0 | 34.85 | 3.85 | F |
2388 | 2610 | 1.067060 | GCTGTTTGTGTTGGTTCTCCC | 59.933 | 52.381 | 0.0 | 0.0 | 0.00 | 4.30 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1581 | 1800 | 0.123266 | AGAGAAGGGGGAAATGGGGA | 59.877 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 | R |
2263 | 2485 | 3.462483 | ACACAATACAGTTGACGACCA | 57.538 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 | R |
2715 | 2987 | 0.385029 | GCCATGGATGCACGCATTAA | 59.615 | 50.000 | 18.40 | 0.00 | 36.70 | 1.40 | R |
3094 | 3366 | 7.860373 | TGTGCTTGAAAAACATGTTATAGACAC | 59.140 | 33.333 | 12.39 | 14.01 | 42.04 | 3.67 | R |
3456 | 3738 | 2.160205 | TCAGTACAGAGGGAGAACACG | 58.840 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 | R |
4122 | 4410 | 0.107703 | TTCCCGGCTCATCATCACAC | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
41 | 42 | 9.985730 | TCCGGTTTATGTAAATTATATCGAACT | 57.014 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
58 | 59 | 9.996554 | ATATCGAACTTATGTCCATTTACATGA | 57.003 | 29.630 | 0.00 | 0.00 | 40.29 | 3.07 |
59 | 60 | 8.731275 | ATCGAACTTATGTCCATTTACATGAA | 57.269 | 30.769 | 0.00 | 0.00 | 40.29 | 2.57 |
60 | 61 | 8.731275 | TCGAACTTATGTCCATTTACATGAAT | 57.269 | 30.769 | 0.00 | 0.00 | 40.29 | 2.57 |
61 | 62 | 9.173021 | TCGAACTTATGTCCATTTACATGAATT | 57.827 | 29.630 | 0.00 | 0.00 | 40.29 | 2.17 |
62 | 63 | 9.787532 | CGAACTTATGTCCATTTACATGAATTT | 57.212 | 29.630 | 0.00 | 0.00 | 40.29 | 1.82 |
64 | 65 | 9.787532 | AACTTATGTCCATTTACATGAATTTCG | 57.212 | 29.630 | 0.00 | 0.00 | 40.29 | 3.46 |
65 | 66 | 8.405531 | ACTTATGTCCATTTACATGAATTTCGG | 58.594 | 33.333 | 0.00 | 0.00 | 40.29 | 4.30 |
66 | 67 | 4.992688 | TGTCCATTTACATGAATTTCGGC | 58.007 | 39.130 | 0.00 | 0.00 | 31.07 | 5.54 |
67 | 68 | 4.035017 | GTCCATTTACATGAATTTCGGCG | 58.965 | 43.478 | 0.00 | 0.00 | 31.07 | 6.46 |
68 | 69 | 3.692101 | TCCATTTACATGAATTTCGGCGT | 59.308 | 39.130 | 6.85 | 0.00 | 31.07 | 5.68 |
69 | 70 | 3.790820 | CCATTTACATGAATTTCGGCGTG | 59.209 | 43.478 | 6.85 | 0.00 | 31.07 | 5.34 |
70 | 71 | 3.479505 | TTTACATGAATTTCGGCGTGG | 57.520 | 42.857 | 6.85 | 0.00 | 0.00 | 4.94 |
71 | 72 | 1.374560 | TACATGAATTTCGGCGTGGG | 58.625 | 50.000 | 6.85 | 0.00 | 0.00 | 4.61 |
72 | 73 | 0.608035 | ACATGAATTTCGGCGTGGGT | 60.608 | 50.000 | 6.85 | 0.00 | 0.00 | 4.51 |
73 | 74 | 0.525761 | CATGAATTTCGGCGTGGGTT | 59.474 | 50.000 | 6.85 | 0.00 | 0.00 | 4.11 |
74 | 75 | 1.067915 | CATGAATTTCGGCGTGGGTTT | 60.068 | 47.619 | 6.85 | 0.00 | 0.00 | 3.27 |
75 | 76 | 1.893544 | TGAATTTCGGCGTGGGTTTA | 58.106 | 45.000 | 6.85 | 0.00 | 0.00 | 2.01 |
76 | 77 | 1.536331 | TGAATTTCGGCGTGGGTTTAC | 59.464 | 47.619 | 6.85 | 0.00 | 0.00 | 2.01 |
77 | 78 | 0.518195 | AATTTCGGCGTGGGTTTACG | 59.482 | 50.000 | 6.85 | 0.00 | 46.28 | 3.18 |
78 | 79 | 0.320596 | ATTTCGGCGTGGGTTTACGA | 60.321 | 50.000 | 6.85 | 0.00 | 46.46 | 3.43 |
79 | 80 | 0.320596 | TTTCGGCGTGGGTTTACGAT | 60.321 | 50.000 | 6.85 | 0.00 | 46.46 | 3.73 |
80 | 81 | 1.015085 | TTCGGCGTGGGTTTACGATG | 61.015 | 55.000 | 6.85 | 0.00 | 46.46 | 3.84 |
81 | 82 | 1.446445 | CGGCGTGGGTTTACGATGA | 60.446 | 57.895 | 0.00 | 0.00 | 46.46 | 2.92 |
82 | 83 | 1.418342 | CGGCGTGGGTTTACGATGAG | 61.418 | 60.000 | 0.00 | 0.00 | 46.46 | 2.90 |
83 | 84 | 1.702491 | GGCGTGGGTTTACGATGAGC | 61.702 | 60.000 | 2.14 | 0.00 | 46.46 | 4.26 |
84 | 85 | 1.995991 | CGTGGGTTTACGATGAGCG | 59.004 | 57.895 | 0.00 | 0.00 | 46.46 | 5.03 |
95 | 96 | 0.792640 | CGATGAGCGTTGGATATGCC | 59.207 | 55.000 | 0.00 | 0.00 | 39.74 | 4.40 |
96 | 97 | 1.160137 | GATGAGCGTTGGATATGCCC | 58.840 | 55.000 | 0.00 | 0.00 | 39.74 | 5.36 |
97 | 98 | 0.767375 | ATGAGCGTTGGATATGCCCT | 59.233 | 50.000 | 0.00 | 0.00 | 39.74 | 5.19 |
98 | 99 | 0.546122 | TGAGCGTTGGATATGCCCTT | 59.454 | 50.000 | 0.00 | 0.00 | 39.74 | 3.95 |
99 | 100 | 1.765904 | TGAGCGTTGGATATGCCCTTA | 59.234 | 47.619 | 0.00 | 0.00 | 39.74 | 2.69 |
100 | 101 | 2.224281 | TGAGCGTTGGATATGCCCTTAG | 60.224 | 50.000 | 0.00 | 0.00 | 39.74 | 2.18 |
101 | 102 | 1.072331 | AGCGTTGGATATGCCCTTAGG | 59.928 | 52.381 | 0.00 | 0.00 | 39.74 | 2.69 |
102 | 103 | 1.202770 | GCGTTGGATATGCCCTTAGGT | 60.203 | 52.381 | 0.00 | 0.00 | 34.97 | 3.08 |
103 | 104 | 2.038033 | GCGTTGGATATGCCCTTAGGTA | 59.962 | 50.000 | 0.00 | 0.00 | 34.97 | 3.08 |
104 | 105 | 3.864921 | GCGTTGGATATGCCCTTAGGTAG | 60.865 | 52.174 | 0.00 | 0.00 | 34.97 | 3.18 |
105 | 106 | 3.576982 | CGTTGGATATGCCCTTAGGTAGA | 59.423 | 47.826 | 0.00 | 0.00 | 34.97 | 2.59 |
106 | 107 | 4.039973 | CGTTGGATATGCCCTTAGGTAGAA | 59.960 | 45.833 | 0.00 | 0.00 | 34.97 | 2.10 |
107 | 108 | 5.454187 | CGTTGGATATGCCCTTAGGTAGAAA | 60.454 | 44.000 | 0.00 | 0.00 | 34.97 | 2.52 |
108 | 109 | 5.562298 | TGGATATGCCCTTAGGTAGAAAC | 57.438 | 43.478 | 0.00 | 0.00 | 34.97 | 2.78 |
109 | 110 | 5.224441 | TGGATATGCCCTTAGGTAGAAACT | 58.776 | 41.667 | 0.00 | 0.00 | 34.97 | 2.66 |
110 | 111 | 5.670361 | TGGATATGCCCTTAGGTAGAAACTT | 59.330 | 40.000 | 0.00 | 0.00 | 34.97 | 2.66 |
111 | 112 | 6.159751 | TGGATATGCCCTTAGGTAGAAACTTT | 59.840 | 38.462 | 0.00 | 0.00 | 34.97 | 2.66 |
112 | 113 | 7.061054 | GGATATGCCCTTAGGTAGAAACTTTT | 58.939 | 38.462 | 0.00 | 0.00 | 34.57 | 2.27 |
113 | 114 | 7.560262 | GGATATGCCCTTAGGTAGAAACTTTTT | 59.440 | 37.037 | 0.00 | 0.00 | 34.57 | 1.94 |
135 | 136 | 4.634184 | TTCGTGGTAATGTCTCTCTAGC | 57.366 | 45.455 | 0.00 | 0.00 | 0.00 | 3.42 |
136 | 137 | 3.887352 | TCGTGGTAATGTCTCTCTAGCT | 58.113 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
137 | 138 | 3.628032 | TCGTGGTAATGTCTCTCTAGCTG | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
138 | 139 | 3.712187 | GTGGTAATGTCTCTCTAGCTGC | 58.288 | 50.000 | 0.00 | 0.00 | 0.00 | 5.25 |
139 | 140 | 2.695666 | TGGTAATGTCTCTCTAGCTGCC | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
140 | 141 | 2.695666 | GGTAATGTCTCTCTAGCTGCCA | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 4.92 |
141 | 142 | 3.133003 | GGTAATGTCTCTCTAGCTGCCAA | 59.867 | 47.826 | 0.00 | 0.00 | 0.00 | 4.52 |
142 | 143 | 4.202305 | GGTAATGTCTCTCTAGCTGCCAAT | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
143 | 144 | 2.975732 | TGTCTCTCTAGCTGCCAATG | 57.024 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
144 | 145 | 2.182827 | TGTCTCTCTAGCTGCCAATGT | 58.817 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
145 | 146 | 2.167281 | TGTCTCTCTAGCTGCCAATGTC | 59.833 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
146 | 147 | 1.406898 | TCTCTCTAGCTGCCAATGTCG | 59.593 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
147 | 148 | 0.461548 | TCTCTAGCTGCCAATGTCGG | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
148 | 149 | 0.176680 | CTCTAGCTGCCAATGTCGGT | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
149 | 150 | 0.175760 | TCTAGCTGCCAATGTCGGTC | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
150 | 151 | 1.148157 | CTAGCTGCCAATGTCGGTCG | 61.148 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
151 | 152 | 2.572095 | TAGCTGCCAATGTCGGTCGG | 62.572 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
152 | 153 | 2.819595 | CTGCCAATGTCGGTCGGG | 60.820 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
155 | 156 | 4.444838 | CCAATGTCGGTCGGGCGA | 62.445 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
156 | 157 | 2.885644 | CAATGTCGGTCGGGCGAG | 60.886 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
157 | 158 | 3.066190 | AATGTCGGTCGGGCGAGA | 61.066 | 61.111 | 0.00 | 0.00 | 0.00 | 4.04 |
158 | 159 | 2.642254 | AATGTCGGTCGGGCGAGAA | 61.642 | 57.895 | 0.00 | 0.00 | 0.00 | 2.87 |
159 | 160 | 2.558554 | AATGTCGGTCGGGCGAGAAG | 62.559 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
160 | 161 | 4.493747 | GTCGGTCGGGCGAGAAGG | 62.494 | 72.222 | 0.00 | 0.00 | 0.00 | 3.46 |
163 | 164 | 4.452733 | GGTCGGGCGAGAAGGGTG | 62.453 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
164 | 165 | 4.452733 | GTCGGGCGAGAAGGGTGG | 62.453 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
165 | 166 | 4.689549 | TCGGGCGAGAAGGGTGGA | 62.690 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
166 | 167 | 4.148825 | CGGGCGAGAAGGGTGGAG | 62.149 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
167 | 168 | 3.787001 | GGGCGAGAAGGGTGGAGG | 61.787 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
168 | 169 | 2.683933 | GGCGAGAAGGGTGGAGGA | 60.684 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
169 | 170 | 2.726351 | GGCGAGAAGGGTGGAGGAG | 61.726 | 68.421 | 0.00 | 0.00 | 0.00 | 3.69 |
170 | 171 | 2.726351 | GCGAGAAGGGTGGAGGAGG | 61.726 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
171 | 172 | 1.305381 | CGAGAAGGGTGGAGGAGGT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
172 | 173 | 1.608717 | CGAGAAGGGTGGAGGAGGTG | 61.609 | 65.000 | 0.00 | 0.00 | 0.00 | 4.00 |
173 | 174 | 1.229658 | AGAAGGGTGGAGGAGGTGG | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
174 | 175 | 1.229529 | GAAGGGTGGAGGAGGTGGA | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
175 | 176 | 1.229658 | AAGGGTGGAGGAGGTGGAG | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
176 | 177 | 1.751143 | AAGGGTGGAGGAGGTGGAGA | 61.751 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
177 | 178 | 1.990614 | GGGTGGAGGAGGTGGAGAC | 60.991 | 68.421 | 0.00 | 0.00 | 0.00 | 3.36 |
178 | 179 | 1.229209 | GGTGGAGGAGGTGGAGACA | 60.229 | 63.158 | 0.00 | 0.00 | 38.70 | 3.41 |
179 | 180 | 0.618968 | GGTGGAGGAGGTGGAGACAT | 60.619 | 60.000 | 0.00 | 0.00 | 46.14 | 3.06 |
180 | 181 | 1.343075 | GGTGGAGGAGGTGGAGACATA | 60.343 | 57.143 | 0.00 | 0.00 | 46.14 | 2.29 |
181 | 182 | 2.035632 | GTGGAGGAGGTGGAGACATAG | 58.964 | 57.143 | 0.00 | 0.00 | 46.14 | 2.23 |
182 | 183 | 1.930204 | TGGAGGAGGTGGAGACATAGA | 59.070 | 52.381 | 0.00 | 0.00 | 46.14 | 1.98 |
183 | 184 | 2.091610 | TGGAGGAGGTGGAGACATAGAG | 60.092 | 54.545 | 0.00 | 0.00 | 46.14 | 2.43 |
184 | 185 | 2.175931 | GGAGGAGGTGGAGACATAGAGA | 59.824 | 54.545 | 0.00 | 0.00 | 46.14 | 3.10 |
185 | 186 | 3.486383 | GAGGAGGTGGAGACATAGAGAG | 58.514 | 54.545 | 0.00 | 0.00 | 46.14 | 3.20 |
186 | 187 | 2.856231 | AGGAGGTGGAGACATAGAGAGT | 59.144 | 50.000 | 0.00 | 0.00 | 46.14 | 3.24 |
187 | 188 | 2.955660 | GGAGGTGGAGACATAGAGAGTG | 59.044 | 54.545 | 0.00 | 0.00 | 46.14 | 3.51 |
188 | 189 | 3.626222 | GGAGGTGGAGACATAGAGAGTGT | 60.626 | 52.174 | 0.00 | 0.00 | 46.14 | 3.55 |
189 | 190 | 4.385421 | GGAGGTGGAGACATAGAGAGTGTA | 60.385 | 50.000 | 0.00 | 0.00 | 46.14 | 2.90 |
190 | 191 | 5.381757 | GAGGTGGAGACATAGAGAGTGTAT | 58.618 | 45.833 | 0.00 | 0.00 | 46.14 | 2.29 |
191 | 192 | 6.466038 | GGAGGTGGAGACATAGAGAGTGTATA | 60.466 | 46.154 | 0.00 | 0.00 | 46.14 | 1.47 |
192 | 193 | 7.097623 | AGGTGGAGACATAGAGAGTGTATAT | 57.902 | 40.000 | 0.00 | 0.00 | 46.14 | 0.86 |
193 | 194 | 8.220898 | AGGTGGAGACATAGAGAGTGTATATA | 57.779 | 38.462 | 0.00 | 0.00 | 46.14 | 0.86 |
194 | 195 | 8.670490 | AGGTGGAGACATAGAGAGTGTATATAA | 58.330 | 37.037 | 0.00 | 0.00 | 46.14 | 0.98 |
195 | 196 | 9.298250 | GGTGGAGACATAGAGAGTGTATATAAA | 57.702 | 37.037 | 0.00 | 0.00 | 46.14 | 1.40 |
229 | 230 | 8.598202 | AAAAAGTTACCCAAAGAAAAGGTAGA | 57.402 | 30.769 | 0.00 | 0.00 | 37.44 | 2.59 |
230 | 231 | 8.598202 | AAAAGTTACCCAAAGAAAAGGTAGAA | 57.402 | 30.769 | 0.00 | 0.00 | 37.44 | 2.10 |
231 | 232 | 8.598202 | AAAGTTACCCAAAGAAAAGGTAGAAA | 57.402 | 30.769 | 0.00 | 0.00 | 37.44 | 2.52 |
232 | 233 | 8.598202 | AAGTTACCCAAAGAAAAGGTAGAAAA | 57.402 | 30.769 | 0.00 | 0.00 | 37.44 | 2.29 |
233 | 234 | 8.598202 | AGTTACCCAAAGAAAAGGTAGAAAAA | 57.402 | 30.769 | 0.00 | 0.00 | 37.44 | 1.94 |
234 | 235 | 8.692710 | AGTTACCCAAAGAAAAGGTAGAAAAAG | 58.307 | 33.333 | 0.00 | 0.00 | 37.44 | 2.27 |
235 | 236 | 8.472413 | GTTACCCAAAGAAAAGGTAGAAAAAGT | 58.528 | 33.333 | 0.00 | 0.00 | 37.44 | 2.66 |
236 | 237 | 6.873997 | ACCCAAAGAAAAGGTAGAAAAAGTG | 58.126 | 36.000 | 0.00 | 0.00 | 30.13 | 3.16 |
237 | 238 | 6.666113 | ACCCAAAGAAAAGGTAGAAAAAGTGA | 59.334 | 34.615 | 0.00 | 0.00 | 30.13 | 3.41 |
238 | 239 | 7.179516 | ACCCAAAGAAAAGGTAGAAAAAGTGAA | 59.820 | 33.333 | 0.00 | 0.00 | 30.13 | 3.18 |
239 | 240 | 8.038351 | CCCAAAGAAAAGGTAGAAAAAGTGAAA | 58.962 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
240 | 241 | 9.430623 | CCAAAGAAAAGGTAGAAAAAGTGAAAA | 57.569 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
248 | 249 | 8.494016 | AGGTAGAAAAAGTGAAAATATCTCGG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
249 | 250 | 8.319146 | AGGTAGAAAAAGTGAAAATATCTCGGA | 58.681 | 33.333 | 0.00 | 0.00 | 0.00 | 4.55 |
250 | 251 | 8.604890 | GGTAGAAAAAGTGAAAATATCTCGGAG | 58.395 | 37.037 | 0.00 | 0.00 | 0.00 | 4.63 |
251 | 252 | 7.617041 | AGAAAAAGTGAAAATATCTCGGAGG | 57.383 | 36.000 | 4.96 | 0.00 | 0.00 | 4.30 |
252 | 253 | 7.168905 | AGAAAAAGTGAAAATATCTCGGAGGT | 58.831 | 34.615 | 4.96 | 0.00 | 0.00 | 3.85 |
253 | 254 | 7.665974 | AGAAAAAGTGAAAATATCTCGGAGGTT | 59.334 | 33.333 | 4.96 | 0.00 | 0.00 | 3.50 |
254 | 255 | 7.761038 | AAAAGTGAAAATATCTCGGAGGTTT | 57.239 | 32.000 | 4.96 | 2.15 | 0.00 | 3.27 |
255 | 256 | 6.986904 | AAGTGAAAATATCTCGGAGGTTTC | 57.013 | 37.500 | 4.96 | 10.26 | 0.00 | 2.78 |
256 | 257 | 6.049955 | AGTGAAAATATCTCGGAGGTTTCA | 57.950 | 37.500 | 16.13 | 16.13 | 33.76 | 2.69 |
257 | 258 | 6.472887 | AGTGAAAATATCTCGGAGGTTTCAA | 58.527 | 36.000 | 19.16 | 8.80 | 36.90 | 2.69 |
258 | 259 | 6.371825 | AGTGAAAATATCTCGGAGGTTTCAAC | 59.628 | 38.462 | 19.16 | 15.35 | 36.90 | 3.18 |
259 | 260 | 6.371825 | GTGAAAATATCTCGGAGGTTTCAACT | 59.628 | 38.462 | 19.16 | 2.90 | 36.90 | 3.16 |
260 | 261 | 6.594159 | TGAAAATATCTCGGAGGTTTCAACTC | 59.406 | 38.462 | 17.02 | 8.16 | 33.37 | 3.01 |
270 | 271 | 4.434520 | GAGGTTTCAACTCCTCTATTCCG | 58.565 | 47.826 | 4.24 | 0.00 | 44.68 | 4.30 |
271 | 272 | 2.937149 | GGTTTCAACTCCTCTATTCCGC | 59.063 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
272 | 273 | 3.596214 | GTTTCAACTCCTCTATTCCGCA | 58.404 | 45.455 | 0.00 | 0.00 | 0.00 | 5.69 |
273 | 274 | 3.973206 | TTCAACTCCTCTATTCCGCAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 4.85 |
274 | 275 | 3.526931 | TCAACTCCTCTATTCCGCAAG | 57.473 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
293 | 294 | 5.049405 | CGCAAGGAGTATAATCAAATGGGTC | 60.049 | 44.000 | 2.18 | 0.00 | 0.00 | 4.46 |
299 | 300 | 6.371825 | GGAGTATAATCAAATGGGTCGGAATC | 59.628 | 42.308 | 2.18 | 0.00 | 0.00 | 2.52 |
307 | 308 | 0.177141 | TGGGTCGGAATCGGATGTTC | 59.823 | 55.000 | 0.00 | 0.00 | 36.95 | 3.18 |
317 | 318 | 2.762535 | TCGGATGTTCTTCCAACCTC | 57.237 | 50.000 | 5.76 | 0.00 | 35.34 | 3.85 |
320 | 321 | 2.716217 | GGATGTTCTTCCAACCTCCAG | 58.284 | 52.381 | 4.46 | 0.00 | 35.74 | 3.86 |
325 | 326 | 0.620556 | TCTTCCAACCTCCAGCATCC | 59.379 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
326 | 327 | 0.394899 | CTTCCAACCTCCAGCATCCC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
334 | 335 | 0.394899 | CTCCAGCATCCCCTCCAAAC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 2.93 |
336 | 337 | 0.394899 | CCAGCATCCCCTCCAAACTC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
342 | 343 | 1.672356 | CCCCTCCAAACTCTGCGTG | 60.672 | 63.158 | 0.00 | 0.00 | 0.00 | 5.34 |
375 | 376 | 4.143179 | GCTTTTGAGTGTGGTCGTGTATAC | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 1.47 |
380 | 381 | 2.753452 | AGTGTGGTCGTGTATACTGGAG | 59.247 | 50.000 | 4.17 | 0.00 | 0.00 | 3.86 |
385 | 386 | 2.963782 | GGTCGTGTATACTGGAGGGAAT | 59.036 | 50.000 | 4.17 | 0.00 | 0.00 | 3.01 |
393 | 394 | 5.843969 | TGTATACTGGAGGGAATCTATGCAA | 59.156 | 40.000 | 4.17 | 0.00 | 0.00 | 4.08 |
421 | 431 | 4.339814 | GGATCAACCAGTAGAGGAGTACAG | 59.660 | 50.000 | 0.00 | 0.00 | 38.79 | 2.74 |
445 | 455 | 2.224209 | ACGAAACACTAGGGGAACACAG | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
475 | 485 | 2.546795 | CGTGCAGAGAAGAAACTGGAGT | 60.547 | 50.000 | 0.00 | 0.00 | 35.38 | 3.85 |
491 | 501 | 1.134098 | GGAGTACCACATCCCCACATG | 60.134 | 57.143 | 0.00 | 0.00 | 35.97 | 3.21 |
497 | 507 | 0.329261 | CACATCCCCACATGGTCAGT | 59.671 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
502 | 512 | 1.843851 | TCCCCACATGGTCAGTATTCC | 59.156 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
503 | 513 | 1.475034 | CCCCACATGGTCAGTATTCCG | 60.475 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
504 | 514 | 1.484653 | CCCACATGGTCAGTATTCCGA | 59.515 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
524 | 534 | 4.379813 | CCGAAAGTCCTGAAAACATGGATG | 60.380 | 45.833 | 0.00 | 0.00 | 32.03 | 3.51 |
529 | 614 | 5.573219 | AGTCCTGAAAACATGGATGAATGA | 58.427 | 37.500 | 0.00 | 0.00 | 32.03 | 2.57 |
533 | 618 | 6.046593 | CCTGAAAACATGGATGAATGAATGG | 58.953 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
537 | 622 | 7.766738 | TGAAAACATGGATGAATGAATGGATTG | 59.233 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
542 | 627 | 9.150028 | ACATGGATGAATGAATGGATTGATAAA | 57.850 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
549 | 725 | 9.258629 | TGAATGAATGGATTGATAAAAGGAAGT | 57.741 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
581 | 757 | 6.027025 | ACAACTAGTCTAGTGGGATGGATA | 57.973 | 41.667 | 17.21 | 0.00 | 39.39 | 2.59 |
582 | 758 | 6.625267 | ACAACTAGTCTAGTGGGATGGATAT | 58.375 | 40.000 | 17.21 | 0.00 | 39.39 | 1.63 |
583 | 759 | 6.722129 | ACAACTAGTCTAGTGGGATGGATATC | 59.278 | 42.308 | 17.21 | 0.00 | 39.39 | 1.63 |
589 | 765 | 6.046168 | AGTCTAGTGGGATGGATATCAGTAGT | 59.954 | 42.308 | 4.83 | 0.00 | 35.67 | 2.73 |
590 | 766 | 6.151985 | GTCTAGTGGGATGGATATCAGTAGTG | 59.848 | 46.154 | 4.83 | 0.00 | 35.67 | 2.74 |
597 | 773 | 5.247110 | GGATGGATATCAGTAGTGGTGATGT | 59.753 | 44.000 | 4.83 | 0.00 | 35.39 | 3.06 |
602 | 778 | 3.251479 | TCAGTAGTGGTGATGTGCATC | 57.749 | 47.619 | 5.30 | 5.30 | 38.29 | 3.91 |
874 | 1073 | 4.324641 | GCCAACTCCCTCCTCTTTTTATCT | 60.325 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
875 | 1074 | 5.808050 | GCCAACTCCCTCCTCTTTTTATCTT | 60.808 | 44.000 | 0.00 | 0.00 | 0.00 | 2.40 |
893 | 1103 | 0.196118 | TTCCCCCTTCCTTCCTCTGT | 59.804 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
894 | 1104 | 0.252742 | TCCCCCTTCCTTCCTCTGTC | 60.253 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
927 | 1137 | 2.032204 | CAGCACTTGTGACAGAAGAAGC | 60.032 | 50.000 | 18.49 | 18.91 | 0.00 | 3.86 |
929 | 1139 | 2.205074 | CACTTGTGACAGAAGAAGCGT | 58.795 | 47.619 | 18.49 | 0.00 | 0.00 | 5.07 |
932 | 1142 | 0.750249 | TGTGACAGAAGAAGCGTGGA | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1115 | 1330 | 1.382914 | AACCTAACCCCTGCTTCCAT | 58.617 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1121 | 1336 | 4.113815 | CCCTGCTTCCATCGCCCA | 62.114 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
1243 | 1462 | 2.213499 | GATCGTCCGATTTCCAATGCT | 58.787 | 47.619 | 3.41 | 0.00 | 34.60 | 3.79 |
1244 | 1463 | 1.368641 | TCGTCCGATTTCCAATGCTG | 58.631 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1249 | 1468 | 1.679139 | CGATTTCCAATGCTGCCCTA | 58.321 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1256 | 1475 | 2.983879 | AATGCTGCCCTACGCCCTT | 61.984 | 57.895 | 0.00 | 0.00 | 36.24 | 3.95 |
1259 | 1478 | 4.101448 | CTGCCCTACGCCCTTGCT | 62.101 | 66.667 | 0.00 | 0.00 | 36.24 | 3.91 |
1260 | 1479 | 3.628646 | CTGCCCTACGCCCTTGCTT | 62.629 | 63.158 | 0.00 | 0.00 | 36.24 | 3.91 |
1263 | 1482 | 1.153349 | CCCTACGCCCTTGCTTCTC | 60.153 | 63.158 | 0.00 | 0.00 | 34.43 | 2.87 |
1287 | 1506 | 1.832608 | TCCAGGATCACGCCGCTAT | 60.833 | 57.895 | 0.00 | 0.00 | 0.00 | 2.97 |
1408 | 1627 | 1.303074 | CAGCTGCAGAAGAAGGCCA | 60.303 | 57.895 | 20.43 | 0.00 | 0.00 | 5.36 |
1581 | 1800 | 1.278413 | GAGCCCGTAAGTTTCCCTTCT | 59.722 | 52.381 | 0.00 | 0.00 | 34.46 | 2.85 |
1583 | 1802 | 1.678123 | GCCCGTAAGTTTCCCTTCTCC | 60.678 | 57.143 | 0.00 | 0.00 | 34.46 | 3.71 |
1586 | 1805 | 1.626825 | CGTAAGTTTCCCTTCTCCCCA | 59.373 | 52.381 | 0.00 | 0.00 | 34.46 | 4.96 |
1686 | 1908 | 0.465460 | TTGTTGTGCCTGACCACCTC | 60.465 | 55.000 | 0.00 | 0.00 | 34.85 | 3.85 |
1780 | 2002 | 1.203250 | TCACCACTGGTACCCTCATCA | 60.203 | 52.381 | 10.07 | 0.00 | 32.11 | 3.07 |
1822 | 2044 | 6.684897 | TTTCCCTTCCATGTGAAATGAAAT | 57.315 | 33.333 | 11.88 | 0.00 | 32.17 | 2.17 |
1823 | 2045 | 5.664294 | TCCCTTCCATGTGAAATGAAATG | 57.336 | 39.130 | 0.00 | 0.00 | 31.06 | 2.32 |
1824 | 2046 | 5.331906 | TCCCTTCCATGTGAAATGAAATGA | 58.668 | 37.500 | 0.00 | 0.00 | 31.06 | 2.57 |
1825 | 2047 | 5.779260 | TCCCTTCCATGTGAAATGAAATGAA | 59.221 | 36.000 | 0.00 | 0.00 | 31.06 | 2.57 |
1826 | 2048 | 6.269538 | TCCCTTCCATGTGAAATGAAATGAAA | 59.730 | 34.615 | 0.00 | 0.00 | 31.06 | 2.69 |
2388 | 2610 | 1.067060 | GCTGTTTGTGTTGGTTCTCCC | 59.933 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2419 | 2641 | 1.327303 | GAGATGTCCTCCTCGCTCAT | 58.673 | 55.000 | 0.00 | 0.00 | 35.87 | 2.90 |
2508 | 2778 | 8.792831 | ATTAATTATTCTGAGCAATGCTTTCG | 57.207 | 30.769 | 9.91 | 0.92 | 39.88 | 3.46 |
2527 | 2797 | 6.314400 | GCTTTCGTGGTGTATTTATCCACTAA | 59.686 | 38.462 | 10.97 | 4.63 | 46.36 | 2.24 |
2612 | 2882 | 3.834489 | ACTGAGATATGCCAGTTCTGG | 57.166 | 47.619 | 13.88 | 13.88 | 40.40 | 3.86 |
2627 | 2897 | 5.361857 | CCAGTTCTGGCCTTTATTTCATGAT | 59.638 | 40.000 | 3.32 | 0.00 | 0.00 | 2.45 |
2671 | 2943 | 7.517321 | CAAAGCTGATTTCTTAGTTCAGTCTC | 58.483 | 38.462 | 0.00 | 0.00 | 39.24 | 3.36 |
2674 | 2946 | 5.063312 | GCTGATTTCTTAGTTCAGTCTCTGC | 59.937 | 44.000 | 9.76 | 0.00 | 39.24 | 4.26 |
2912 | 3184 | 8.812972 | TCTTACCTTAAAGATATGCGACCATAT | 58.187 | 33.333 | 0.00 | 0.00 | 45.10 | 1.78 |
3088 | 3360 | 5.353678 | ACTTTTCAGTCAGCATTAGATGAGC | 59.646 | 40.000 | 0.00 | 0.00 | 41.50 | 4.26 |
3089 | 3361 | 4.476628 | TTCAGTCAGCATTAGATGAGCA | 57.523 | 40.909 | 0.00 | 0.00 | 41.50 | 4.26 |
3094 | 3366 | 4.987285 | AGTCAGCATTAGATGAGCAATACG | 59.013 | 41.667 | 0.00 | 0.00 | 41.50 | 3.06 |
3140 | 3412 | 3.488467 | CTAGCATCTGGGGCTGGGC | 62.488 | 68.421 | 0.00 | 0.00 | 42.62 | 5.36 |
3156 | 3428 | 1.322538 | GGGCCATGTTTGCGGAGAAT | 61.323 | 55.000 | 4.39 | 0.00 | 0.00 | 2.40 |
3254 | 3526 | 4.702131 | AGAATTAACTGCCCTGATTGTCAC | 59.298 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
3306 | 3578 | 5.950758 | TTAACAGCGCTTTATTTCCAAGA | 57.049 | 34.783 | 7.50 | 0.00 | 0.00 | 3.02 |
3397 | 3679 | 4.397481 | TCATGACTGCTCATTGTAGGAG | 57.603 | 45.455 | 0.00 | 0.00 | 40.50 | 3.69 |
3599 | 3881 | 3.610911 | AGGAACTGCTTTGTATACCTGC | 58.389 | 45.455 | 0.00 | 2.91 | 37.18 | 4.85 |
3681 | 3966 | 4.262592 | CCTCTGGCATTTTACAAAGGCTTT | 60.263 | 41.667 | 6.68 | 6.68 | 0.00 | 3.51 |
3806 | 4091 | 1.264288 | GCATGCTAAATCGGCTACACC | 59.736 | 52.381 | 11.37 | 0.00 | 0.00 | 4.16 |
3810 | 4095 | 2.027561 | TGCTAAATCGGCTACACCAACT | 60.028 | 45.455 | 0.00 | 0.00 | 39.03 | 3.16 |
3872 | 4157 | 5.631096 | GTGAGAAAGCCTGCAAATTAAAGAC | 59.369 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3911 | 4196 | 5.410355 | TGTAGAGGGTGGTATACAACAAC | 57.590 | 43.478 | 12.50 | 4.67 | 39.06 | 3.32 |
4050 | 4337 | 4.892934 | ACAGGACCTTAAACAAATGCTGAA | 59.107 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
4064 | 4351 | 3.784701 | TGCTGAAGTAGTTCGGAGATC | 57.215 | 47.619 | 21.15 | 5.60 | 41.09 | 2.75 |
4122 | 4410 | 5.114780 | ACATTAGCTGCAGTAGATCTTGTG | 58.885 | 41.667 | 16.64 | 8.01 | 0.00 | 3.33 |
4137 | 4425 | 1.395954 | CTTGTGTGTGATGATGAGCCG | 59.604 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
4231 | 4522 | 0.031178 | CACACTGCCTTTGCTTGGTC | 59.969 | 55.000 | 0.00 | 0.00 | 38.71 | 4.02 |
4237 | 4528 | 3.319122 | ACTGCCTTTGCTTGGTCTTTTAG | 59.681 | 43.478 | 0.00 | 0.00 | 38.71 | 1.85 |
4296 | 4588 | 6.367686 | TGCAATGTTATAACTGAGATGCTG | 57.632 | 37.500 | 16.33 | 0.39 | 0.00 | 4.41 |
4329 | 4621 | 2.297315 | CAGACACTGGTGAGCACTAGAA | 59.703 | 50.000 | 18.94 | 0.00 | 41.75 | 2.10 |
4333 | 4625 | 3.134804 | ACACTGGTGAGCACTAGAACTTT | 59.865 | 43.478 | 18.94 | 0.00 | 41.75 | 2.66 |
4335 | 4627 | 4.576463 | CACTGGTGAGCACTAGAACTTTTT | 59.424 | 41.667 | 18.94 | 0.00 | 41.75 | 1.94 |
4361 | 4653 | 6.764877 | TTTTTGAAACGAGAGCACTAGTAG | 57.235 | 37.500 | 0.00 | 0.00 | 32.09 | 2.57 |
4362 | 4654 | 5.449107 | TTTGAAACGAGAGCACTAGTAGT | 57.551 | 39.130 | 0.00 | 0.00 | 32.09 | 2.73 |
4363 | 4655 | 5.449107 | TTGAAACGAGAGCACTAGTAGTT | 57.551 | 39.130 | 0.00 | 0.00 | 32.09 | 2.24 |
4364 | 4656 | 5.449107 | TGAAACGAGAGCACTAGTAGTTT | 57.551 | 39.130 | 0.00 | 2.17 | 32.09 | 2.66 |
4470 | 4845 | 3.006110 | GGTTAATCGATGGGGACGTGATA | 59.994 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
4491 | 4866 | 0.539669 | GTTAGGCCAGGCTGTTTGGT | 60.540 | 55.000 | 12.43 | 0.00 | 38.02 | 3.67 |
4493 | 4868 | 1.715019 | TAGGCCAGGCTGTTTGGTGT | 61.715 | 55.000 | 12.43 | 0.00 | 38.02 | 4.16 |
4501 | 4876 | 4.021192 | CCAGGCTGTTTGGTGTTAATTGAT | 60.021 | 41.667 | 14.43 | 0.00 | 0.00 | 2.57 |
4549 | 4924 | 2.103042 | GGTAGCTGCTTGGTCTGCG | 61.103 | 63.158 | 7.79 | 0.00 | 36.26 | 5.18 |
4591 | 4966 | 4.986645 | TGCGCACGCTGGACACAT | 62.987 | 61.111 | 16.77 | 0.00 | 42.51 | 3.21 |
4592 | 4967 | 3.726517 | GCGCACGCTGGACACATT | 61.727 | 61.111 | 7.96 | 0.00 | 38.26 | 2.71 |
4593 | 4968 | 2.945984 | CGCACGCTGGACACATTT | 59.054 | 55.556 | 0.00 | 0.00 | 0.00 | 2.32 |
4594 | 4969 | 1.282570 | CGCACGCTGGACACATTTT | 59.717 | 52.632 | 0.00 | 0.00 | 0.00 | 1.82 |
4595 | 4970 | 0.725784 | CGCACGCTGGACACATTTTC | 60.726 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4596 | 4971 | 0.725784 | GCACGCTGGACACATTTTCG | 60.726 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4597 | 4972 | 0.110238 | CACGCTGGACACATTTTCGG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4598 | 4973 | 1.154225 | CGCTGGACACATTTTCGGC | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
4599 | 4974 | 1.851021 | CGCTGGACACATTTTCGGCA | 61.851 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
4600 | 4975 | 0.387239 | GCTGGACACATTTTCGGCAC | 60.387 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4657 | 5032 | 5.236478 | GGATTCAGTACACAACATATTCCCG | 59.764 | 44.000 | 0.00 | 0.00 | 0.00 | 5.14 |
4756 | 5137 | 5.287226 | GCCATTTAGGAAAGAAGATGCATG | 58.713 | 41.667 | 2.46 | 0.00 | 41.22 | 4.06 |
4771 | 5152 | 4.771577 | AGATGCATGATAGACTAGTGGAGG | 59.228 | 45.833 | 2.46 | 0.00 | 0.00 | 4.30 |
4773 | 5154 | 2.564947 | GCATGATAGACTAGTGGAGGGG | 59.435 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
4774 | 5155 | 3.755483 | GCATGATAGACTAGTGGAGGGGA | 60.755 | 52.174 | 0.00 | 0.00 | 0.00 | 4.81 |
4775 | 5156 | 3.596940 | TGATAGACTAGTGGAGGGGAC | 57.403 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
4776 | 5157 | 2.158652 | TGATAGACTAGTGGAGGGGACG | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
4777 | 5158 | 0.549950 | TAGACTAGTGGAGGGGACGG | 59.450 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4778 | 5159 | 1.757340 | GACTAGTGGAGGGGACGGG | 60.757 | 68.421 | 0.00 | 0.00 | 0.00 | 5.28 |
4779 | 5160 | 2.444140 | CTAGTGGAGGGGACGGGG | 60.444 | 72.222 | 0.00 | 0.00 | 0.00 | 5.73 |
4780 | 5161 | 4.791069 | TAGTGGAGGGGACGGGGC | 62.791 | 72.222 | 0.00 | 0.00 | 0.00 | 5.80 |
4837 | 5218 | 2.813908 | GACACGCGTCACCCATCC | 60.814 | 66.667 | 9.86 | 0.00 | 42.13 | 3.51 |
4838 | 5219 | 3.583276 | GACACGCGTCACCCATCCA | 62.583 | 63.158 | 9.86 | 0.00 | 42.13 | 3.41 |
4839 | 5220 | 2.125147 | CACGCGTCACCCATCCAT | 60.125 | 61.111 | 9.86 | 0.00 | 0.00 | 3.41 |
4840 | 5221 | 2.125147 | ACGCGTCACCCATCCATG | 60.125 | 61.111 | 5.58 | 0.00 | 0.00 | 3.66 |
4841 | 5222 | 3.576356 | CGCGTCACCCATCCATGC | 61.576 | 66.667 | 0.00 | 0.00 | 0.00 | 4.06 |
4842 | 5223 | 3.211963 | GCGTCACCCATCCATGCC | 61.212 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
4843 | 5224 | 2.591753 | CGTCACCCATCCATGCCT | 59.408 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
4844 | 5225 | 1.524621 | CGTCACCCATCCATGCCTC | 60.525 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
4845 | 5226 | 1.152881 | GTCACCCATCCATGCCTCC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
4846 | 5227 | 2.196776 | CACCCATCCATGCCTCCC | 59.803 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4847 | 5228 | 3.105928 | ACCCATCCATGCCTCCCC | 61.106 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
4848 | 5229 | 3.907130 | CCCATCCATGCCTCCCCC | 61.907 | 72.222 | 0.00 | 0.00 | 0.00 | 5.40 |
4849 | 5230 | 2.780040 | CCATCCATGCCTCCCCCT | 60.780 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
4850 | 5231 | 2.838467 | CCATCCATGCCTCCCCCTC | 61.838 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
4851 | 5232 | 2.451294 | ATCCATGCCTCCCCCTCC | 60.451 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4852 | 5233 | 4.843331 | TCCATGCCTCCCCCTCCC | 62.843 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
4863 | 5244 | 3.979497 | CCCTCCCGTGGCCCTTTT | 61.979 | 66.667 | 0.00 | 0.00 | 0.00 | 2.27 |
4864 | 5245 | 2.117423 | CCTCCCGTGGCCCTTTTT | 59.883 | 61.111 | 0.00 | 0.00 | 0.00 | 1.94 |
4865 | 5246 | 1.381076 | CCTCCCGTGGCCCTTTTTA | 59.619 | 57.895 | 0.00 | 0.00 | 0.00 | 1.52 |
4866 | 5247 | 0.679960 | CCTCCCGTGGCCCTTTTTAG | 60.680 | 60.000 | 0.00 | 0.00 | 0.00 | 1.85 |
4867 | 5248 | 1.303806 | TCCCGTGGCCCTTTTTAGC | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 3.09 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
15 | 16 | 9.985730 | AGTTCGATATAATTTACATAAACCGGA | 57.014 | 29.630 | 9.46 | 0.00 | 0.00 | 5.14 |
32 | 33 | 9.996554 | TCATGTAAATGGACATAAGTTCGATAT | 57.003 | 29.630 | 0.00 | 0.00 | 37.99 | 1.63 |
33 | 34 | 9.825109 | TTCATGTAAATGGACATAAGTTCGATA | 57.175 | 29.630 | 0.00 | 0.00 | 37.99 | 2.92 |
34 | 35 | 8.731275 | TTCATGTAAATGGACATAAGTTCGAT | 57.269 | 30.769 | 0.00 | 0.00 | 37.99 | 3.59 |
35 | 36 | 8.731275 | ATTCATGTAAATGGACATAAGTTCGA | 57.269 | 30.769 | 0.00 | 0.00 | 37.99 | 3.71 |
36 | 37 | 9.787532 | AAATTCATGTAAATGGACATAAGTTCG | 57.212 | 29.630 | 0.00 | 0.00 | 37.99 | 3.95 |
38 | 39 | 9.787532 | CGAAATTCATGTAAATGGACATAAGTT | 57.212 | 29.630 | 0.00 | 0.00 | 37.99 | 2.66 |
39 | 40 | 8.405531 | CCGAAATTCATGTAAATGGACATAAGT | 58.594 | 33.333 | 0.00 | 0.00 | 37.99 | 2.24 |
40 | 41 | 7.379529 | GCCGAAATTCATGTAAATGGACATAAG | 59.620 | 37.037 | 0.00 | 0.00 | 37.99 | 1.73 |
41 | 42 | 7.199766 | GCCGAAATTCATGTAAATGGACATAA | 58.800 | 34.615 | 0.00 | 0.00 | 37.99 | 1.90 |
42 | 43 | 6.512578 | CGCCGAAATTCATGTAAATGGACATA | 60.513 | 38.462 | 0.00 | 0.00 | 37.99 | 2.29 |
43 | 44 | 5.591099 | GCCGAAATTCATGTAAATGGACAT | 58.409 | 37.500 | 0.00 | 0.00 | 40.78 | 3.06 |
44 | 45 | 4.438065 | CGCCGAAATTCATGTAAATGGACA | 60.438 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
45 | 46 | 4.035017 | CGCCGAAATTCATGTAAATGGAC | 58.965 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
46 | 47 | 3.692101 | ACGCCGAAATTCATGTAAATGGA | 59.308 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
47 | 48 | 3.790820 | CACGCCGAAATTCATGTAAATGG | 59.209 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
48 | 49 | 3.790820 | CCACGCCGAAATTCATGTAAATG | 59.209 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
49 | 50 | 3.181491 | CCCACGCCGAAATTCATGTAAAT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
50 | 51 | 2.162608 | CCCACGCCGAAATTCATGTAAA | 59.837 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
51 | 52 | 1.740585 | CCCACGCCGAAATTCATGTAA | 59.259 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
52 | 53 | 1.339247 | ACCCACGCCGAAATTCATGTA | 60.339 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
53 | 54 | 0.608035 | ACCCACGCCGAAATTCATGT | 60.608 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
54 | 55 | 0.525761 | AACCCACGCCGAAATTCATG | 59.474 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
55 | 56 | 1.253100 | AAACCCACGCCGAAATTCAT | 58.747 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
56 | 57 | 1.536331 | GTAAACCCACGCCGAAATTCA | 59.464 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
57 | 58 | 1.464521 | CGTAAACCCACGCCGAAATTC | 60.465 | 52.381 | 0.00 | 0.00 | 34.78 | 2.17 |
58 | 59 | 0.518195 | CGTAAACCCACGCCGAAATT | 59.482 | 50.000 | 0.00 | 0.00 | 34.78 | 1.82 |
59 | 60 | 0.320596 | TCGTAAACCCACGCCGAAAT | 60.321 | 50.000 | 0.00 | 0.00 | 41.67 | 2.17 |
60 | 61 | 0.320596 | ATCGTAAACCCACGCCGAAA | 60.321 | 50.000 | 0.00 | 0.00 | 41.67 | 3.46 |
61 | 62 | 1.015085 | CATCGTAAACCCACGCCGAA | 61.015 | 55.000 | 0.00 | 0.00 | 41.67 | 4.30 |
62 | 63 | 1.446445 | CATCGTAAACCCACGCCGA | 60.446 | 57.895 | 0.00 | 0.00 | 41.67 | 5.54 |
63 | 64 | 1.418342 | CTCATCGTAAACCCACGCCG | 61.418 | 60.000 | 0.00 | 0.00 | 41.67 | 6.46 |
64 | 65 | 1.702491 | GCTCATCGTAAACCCACGCC | 61.702 | 60.000 | 0.00 | 0.00 | 41.67 | 5.68 |
65 | 66 | 1.713830 | GCTCATCGTAAACCCACGC | 59.286 | 57.895 | 0.00 | 0.00 | 41.67 | 5.34 |
66 | 67 | 1.995991 | CGCTCATCGTAAACCCACG | 59.004 | 57.895 | 0.00 | 0.00 | 43.28 | 4.94 |
76 | 77 | 0.792640 | GGCATATCCAACGCTCATCG | 59.207 | 55.000 | 0.00 | 0.00 | 38.41 | 3.84 |
77 | 78 | 1.160137 | GGGCATATCCAACGCTCATC | 58.840 | 55.000 | 0.00 | 0.00 | 36.21 | 2.92 |
78 | 79 | 0.767375 | AGGGCATATCCAACGCTCAT | 59.233 | 50.000 | 0.00 | 0.00 | 36.21 | 2.90 |
79 | 80 | 0.546122 | AAGGGCATATCCAACGCTCA | 59.454 | 50.000 | 0.00 | 0.00 | 36.21 | 4.26 |
80 | 81 | 2.417719 | CTAAGGGCATATCCAACGCTC | 58.582 | 52.381 | 0.00 | 0.00 | 36.21 | 5.03 |
81 | 82 | 1.072331 | CCTAAGGGCATATCCAACGCT | 59.928 | 52.381 | 0.00 | 0.00 | 36.21 | 5.07 |
82 | 83 | 1.202770 | ACCTAAGGGCATATCCAACGC | 60.203 | 52.381 | 0.00 | 0.00 | 36.21 | 4.84 |
83 | 84 | 2.930826 | ACCTAAGGGCATATCCAACG | 57.069 | 50.000 | 0.00 | 0.00 | 36.21 | 4.10 |
84 | 85 | 5.562298 | TTCTACCTAAGGGCATATCCAAC | 57.438 | 43.478 | 0.00 | 0.00 | 36.21 | 3.77 |
85 | 86 | 5.670361 | AGTTTCTACCTAAGGGCATATCCAA | 59.330 | 40.000 | 0.00 | 0.00 | 36.21 | 3.53 |
86 | 87 | 5.224441 | AGTTTCTACCTAAGGGCATATCCA | 58.776 | 41.667 | 0.00 | 0.00 | 36.21 | 3.41 |
87 | 88 | 5.827326 | AGTTTCTACCTAAGGGCATATCC | 57.173 | 43.478 | 0.00 | 0.00 | 35.63 | 2.59 |
88 | 89 | 8.521170 | AAAAAGTTTCTACCTAAGGGCATATC | 57.479 | 34.615 | 0.00 | 0.00 | 35.63 | 1.63 |
111 | 112 | 5.867716 | GCTAGAGAGACATTACCACGAAAAA | 59.132 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
112 | 113 | 5.185249 | AGCTAGAGAGACATTACCACGAAAA | 59.815 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
113 | 114 | 4.705507 | AGCTAGAGAGACATTACCACGAAA | 59.294 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
114 | 115 | 4.096532 | CAGCTAGAGAGACATTACCACGAA | 59.903 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
115 | 116 | 3.628032 | CAGCTAGAGAGACATTACCACGA | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
116 | 117 | 3.793801 | GCAGCTAGAGAGACATTACCACG | 60.794 | 52.174 | 0.00 | 0.00 | 0.00 | 4.94 |
117 | 118 | 3.491792 | GGCAGCTAGAGAGACATTACCAC | 60.492 | 52.174 | 0.00 | 0.00 | 0.00 | 4.16 |
118 | 119 | 2.695666 | GGCAGCTAGAGAGACATTACCA | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
119 | 120 | 2.695666 | TGGCAGCTAGAGAGACATTACC | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
120 | 121 | 4.392921 | TTGGCAGCTAGAGAGACATTAC | 57.607 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
121 | 122 | 4.406972 | ACATTGGCAGCTAGAGAGACATTA | 59.593 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
122 | 123 | 3.199508 | ACATTGGCAGCTAGAGAGACATT | 59.800 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
123 | 124 | 2.770802 | ACATTGGCAGCTAGAGAGACAT | 59.229 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
124 | 125 | 2.167281 | GACATTGGCAGCTAGAGAGACA | 59.833 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
125 | 126 | 2.797792 | CGACATTGGCAGCTAGAGAGAC | 60.798 | 54.545 | 0.00 | 0.00 | 0.00 | 3.36 |
126 | 127 | 1.406898 | CGACATTGGCAGCTAGAGAGA | 59.593 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
127 | 128 | 1.537776 | CCGACATTGGCAGCTAGAGAG | 60.538 | 57.143 | 0.00 | 0.00 | 0.00 | 3.20 |
128 | 129 | 0.461548 | CCGACATTGGCAGCTAGAGA | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
129 | 130 | 0.176680 | ACCGACATTGGCAGCTAGAG | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
130 | 131 | 0.175760 | GACCGACATTGGCAGCTAGA | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
131 | 132 | 1.148157 | CGACCGACATTGGCAGCTAG | 61.148 | 60.000 | 0.00 | 0.00 | 0.00 | 3.42 |
132 | 133 | 1.153647 | CGACCGACATTGGCAGCTA | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.32 |
133 | 134 | 2.434884 | CGACCGACATTGGCAGCT | 60.435 | 61.111 | 0.00 | 0.00 | 0.00 | 4.24 |
134 | 135 | 3.499737 | CCGACCGACATTGGCAGC | 61.500 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
135 | 136 | 2.819595 | CCCGACCGACATTGGCAG | 60.820 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
138 | 139 | 4.444838 | TCGCCCGACCGACATTGG | 62.445 | 66.667 | 0.00 | 0.00 | 31.36 | 3.16 |
139 | 140 | 2.829043 | TTCTCGCCCGACCGACATTG | 62.829 | 60.000 | 0.00 | 0.00 | 33.12 | 2.82 |
140 | 141 | 2.558554 | CTTCTCGCCCGACCGACATT | 62.559 | 60.000 | 0.00 | 0.00 | 33.12 | 2.71 |
141 | 142 | 3.064987 | CTTCTCGCCCGACCGACAT | 62.065 | 63.158 | 0.00 | 0.00 | 33.12 | 3.06 |
142 | 143 | 3.744719 | CTTCTCGCCCGACCGACA | 61.745 | 66.667 | 0.00 | 0.00 | 33.12 | 4.35 |
143 | 144 | 4.493747 | CCTTCTCGCCCGACCGAC | 62.494 | 72.222 | 0.00 | 0.00 | 33.12 | 4.79 |
146 | 147 | 4.452733 | CACCCTTCTCGCCCGACC | 62.453 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
147 | 148 | 4.452733 | CCACCCTTCTCGCCCGAC | 62.453 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
148 | 149 | 4.689549 | TCCACCCTTCTCGCCCGA | 62.690 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
149 | 150 | 4.148825 | CTCCACCCTTCTCGCCCG | 62.149 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
150 | 151 | 3.787001 | CCTCCACCCTTCTCGCCC | 61.787 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
151 | 152 | 2.683933 | TCCTCCACCCTTCTCGCC | 60.684 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
152 | 153 | 2.726351 | CCTCCTCCACCCTTCTCGC | 61.726 | 68.421 | 0.00 | 0.00 | 0.00 | 5.03 |
153 | 154 | 1.305381 | ACCTCCTCCACCCTTCTCG | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.04 |
154 | 155 | 1.268283 | CCACCTCCTCCACCCTTCTC | 61.268 | 65.000 | 0.00 | 0.00 | 0.00 | 2.87 |
155 | 156 | 1.229658 | CCACCTCCTCCACCCTTCT | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 2.85 |
156 | 157 | 1.229529 | TCCACCTCCTCCACCCTTC | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
157 | 158 | 1.229658 | CTCCACCTCCTCCACCCTT | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
158 | 159 | 2.177518 | TCTCCACCTCCTCCACCCT | 61.178 | 63.158 | 0.00 | 0.00 | 0.00 | 4.34 |
159 | 160 | 1.990614 | GTCTCCACCTCCTCCACCC | 60.991 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
160 | 161 | 0.618968 | ATGTCTCCACCTCCTCCACC | 60.619 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
161 | 162 | 2.035632 | CTATGTCTCCACCTCCTCCAC | 58.964 | 57.143 | 0.00 | 0.00 | 0.00 | 4.02 |
162 | 163 | 1.930204 | TCTATGTCTCCACCTCCTCCA | 59.070 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
163 | 164 | 2.175931 | TCTCTATGTCTCCACCTCCTCC | 59.824 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
164 | 165 | 3.117663 | ACTCTCTATGTCTCCACCTCCTC | 60.118 | 52.174 | 0.00 | 0.00 | 0.00 | 3.71 |
165 | 166 | 2.856231 | ACTCTCTATGTCTCCACCTCCT | 59.144 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
166 | 167 | 2.955660 | CACTCTCTATGTCTCCACCTCC | 59.044 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
167 | 168 | 3.626930 | ACACTCTCTATGTCTCCACCTC | 58.373 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
168 | 169 | 3.748645 | ACACTCTCTATGTCTCCACCT | 57.251 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
169 | 170 | 8.865420 | TTATATACACTCTCTATGTCTCCACC | 57.135 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
204 | 205 | 8.598202 | TCTACCTTTTCTTTGGGTAACTTTTT | 57.402 | 30.769 | 0.00 | 0.00 | 35.51 | 1.94 |
205 | 206 | 8.598202 | TTCTACCTTTTCTTTGGGTAACTTTT | 57.402 | 30.769 | 0.00 | 0.00 | 35.51 | 2.27 |
206 | 207 | 8.598202 | TTTCTACCTTTTCTTTGGGTAACTTT | 57.402 | 30.769 | 0.00 | 0.00 | 35.51 | 2.66 |
207 | 208 | 8.598202 | TTTTCTACCTTTTCTTTGGGTAACTT | 57.402 | 30.769 | 0.00 | 0.00 | 35.51 | 2.66 |
208 | 209 | 8.598202 | TTTTTCTACCTTTTCTTTGGGTAACT | 57.402 | 30.769 | 0.00 | 0.00 | 35.51 | 2.24 |
209 | 210 | 8.472413 | ACTTTTTCTACCTTTTCTTTGGGTAAC | 58.528 | 33.333 | 0.00 | 0.00 | 35.51 | 2.50 |
210 | 211 | 8.471609 | CACTTTTTCTACCTTTTCTTTGGGTAA | 58.528 | 33.333 | 0.00 | 0.00 | 35.51 | 2.85 |
211 | 212 | 7.835181 | TCACTTTTTCTACCTTTTCTTTGGGTA | 59.165 | 33.333 | 0.00 | 0.00 | 34.86 | 3.69 |
212 | 213 | 6.666113 | TCACTTTTTCTACCTTTTCTTTGGGT | 59.334 | 34.615 | 0.00 | 0.00 | 37.16 | 4.51 |
213 | 214 | 7.107639 | TCACTTTTTCTACCTTTTCTTTGGG | 57.892 | 36.000 | 0.00 | 0.00 | 0.00 | 4.12 |
214 | 215 | 8.996024 | TTTCACTTTTTCTACCTTTTCTTTGG | 57.004 | 30.769 | 0.00 | 0.00 | 0.00 | 3.28 |
222 | 223 | 8.947115 | CCGAGATATTTTCACTTTTTCTACCTT | 58.053 | 33.333 | 0.00 | 0.00 | 0.00 | 3.50 |
223 | 224 | 8.319146 | TCCGAGATATTTTCACTTTTTCTACCT | 58.681 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
224 | 225 | 8.488651 | TCCGAGATATTTTCACTTTTTCTACC | 57.511 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
225 | 226 | 8.604890 | CCTCCGAGATATTTTCACTTTTTCTAC | 58.395 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
226 | 227 | 8.319146 | ACCTCCGAGATATTTTCACTTTTTCTA | 58.681 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
227 | 228 | 7.168905 | ACCTCCGAGATATTTTCACTTTTTCT | 58.831 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
228 | 229 | 7.379098 | ACCTCCGAGATATTTTCACTTTTTC | 57.621 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
229 | 230 | 7.761038 | AACCTCCGAGATATTTTCACTTTTT | 57.239 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
230 | 231 | 7.447238 | TGAAACCTCCGAGATATTTTCACTTTT | 59.553 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
231 | 232 | 6.940298 | TGAAACCTCCGAGATATTTTCACTTT | 59.060 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
232 | 233 | 6.472887 | TGAAACCTCCGAGATATTTTCACTT | 58.527 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
233 | 234 | 6.049955 | TGAAACCTCCGAGATATTTTCACT | 57.950 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
234 | 235 | 6.371825 | AGTTGAAACCTCCGAGATATTTTCAC | 59.628 | 38.462 | 0.00 | 3.05 | 0.00 | 3.18 |
235 | 236 | 6.472887 | AGTTGAAACCTCCGAGATATTTTCA | 58.527 | 36.000 | 0.00 | 4.12 | 0.00 | 2.69 |
236 | 237 | 6.037281 | GGAGTTGAAACCTCCGAGATATTTTC | 59.963 | 42.308 | 0.00 | 1.73 | 0.00 | 2.29 |
237 | 238 | 5.880887 | GGAGTTGAAACCTCCGAGATATTTT | 59.119 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
238 | 239 | 5.189934 | AGGAGTTGAAACCTCCGAGATATTT | 59.810 | 40.000 | 0.00 | 0.00 | 41.82 | 1.40 |
239 | 240 | 4.717280 | AGGAGTTGAAACCTCCGAGATATT | 59.283 | 41.667 | 0.00 | 0.00 | 41.82 | 1.28 |
240 | 241 | 4.290942 | AGGAGTTGAAACCTCCGAGATAT | 58.709 | 43.478 | 0.00 | 0.00 | 41.82 | 1.63 |
241 | 242 | 3.700038 | GAGGAGTTGAAACCTCCGAGATA | 59.300 | 47.826 | 8.01 | 0.00 | 44.70 | 1.98 |
242 | 243 | 2.498078 | GAGGAGTTGAAACCTCCGAGAT | 59.502 | 50.000 | 8.01 | 0.00 | 44.70 | 2.75 |
243 | 244 | 1.893801 | GAGGAGTTGAAACCTCCGAGA | 59.106 | 52.381 | 8.01 | 0.00 | 44.70 | 4.04 |
244 | 245 | 2.371910 | GAGGAGTTGAAACCTCCGAG | 57.628 | 55.000 | 8.01 | 0.00 | 44.70 | 4.63 |
249 | 250 | 3.369576 | GCGGAATAGAGGAGTTGAAACCT | 60.370 | 47.826 | 0.00 | 0.00 | 39.41 | 3.50 |
250 | 251 | 2.937149 | GCGGAATAGAGGAGTTGAAACC | 59.063 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
251 | 252 | 3.596214 | TGCGGAATAGAGGAGTTGAAAC | 58.404 | 45.455 | 0.00 | 0.00 | 0.00 | 2.78 |
252 | 253 | 3.973206 | TGCGGAATAGAGGAGTTGAAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
253 | 254 | 3.369471 | CCTTGCGGAATAGAGGAGTTGAA | 60.369 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
254 | 255 | 2.168521 | CCTTGCGGAATAGAGGAGTTGA | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
255 | 256 | 2.168521 | TCCTTGCGGAATAGAGGAGTTG | 59.831 | 50.000 | 0.00 | 0.00 | 36.03 | 3.16 |
256 | 257 | 2.432510 | CTCCTTGCGGAATAGAGGAGTT | 59.567 | 50.000 | 12.83 | 0.00 | 46.55 | 3.01 |
257 | 258 | 2.035632 | CTCCTTGCGGAATAGAGGAGT | 58.964 | 52.381 | 12.83 | 0.00 | 46.55 | 3.85 |
258 | 259 | 2.810439 | CTCCTTGCGGAATAGAGGAG | 57.190 | 55.000 | 7.86 | 7.86 | 46.56 | 3.69 |
259 | 260 | 2.160721 | ACTCCTTGCGGAATAGAGGA | 57.839 | 50.000 | 17.30 | 8.06 | 39.29 | 3.71 |
260 | 261 | 5.723672 | TTATACTCCTTGCGGAATAGAGG | 57.276 | 43.478 | 17.30 | 4.22 | 39.29 | 3.69 |
261 | 262 | 6.925211 | TGATTATACTCCTTGCGGAATAGAG | 58.075 | 40.000 | 13.17 | 13.17 | 39.29 | 2.43 |
262 | 263 | 6.911250 | TGATTATACTCCTTGCGGAATAGA | 57.089 | 37.500 | 6.23 | 0.00 | 39.29 | 1.98 |
263 | 264 | 7.962964 | TTTGATTATACTCCTTGCGGAATAG | 57.037 | 36.000 | 0.00 | 0.00 | 39.29 | 1.73 |
264 | 265 | 7.390440 | CCATTTGATTATACTCCTTGCGGAATA | 59.610 | 37.037 | 0.00 | 0.00 | 39.29 | 1.75 |
265 | 266 | 6.207417 | CCATTTGATTATACTCCTTGCGGAAT | 59.793 | 38.462 | 0.00 | 0.00 | 39.29 | 3.01 |
266 | 267 | 5.530915 | CCATTTGATTATACTCCTTGCGGAA | 59.469 | 40.000 | 0.00 | 0.00 | 39.29 | 4.30 |
267 | 268 | 5.063204 | CCATTTGATTATACTCCTTGCGGA | 58.937 | 41.667 | 0.00 | 0.00 | 37.82 | 5.54 |
268 | 269 | 4.216257 | CCCATTTGATTATACTCCTTGCGG | 59.784 | 45.833 | 0.00 | 0.00 | 0.00 | 5.69 |
269 | 270 | 4.821805 | ACCCATTTGATTATACTCCTTGCG | 59.178 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
270 | 271 | 5.049405 | CGACCCATTTGATTATACTCCTTGC | 60.049 | 44.000 | 0.00 | 0.00 | 0.00 | 4.01 |
271 | 272 | 5.470098 | CCGACCCATTTGATTATACTCCTTG | 59.530 | 44.000 | 0.00 | 0.00 | 0.00 | 3.61 |
272 | 273 | 5.368523 | TCCGACCCATTTGATTATACTCCTT | 59.631 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
273 | 274 | 4.905456 | TCCGACCCATTTGATTATACTCCT | 59.095 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
274 | 275 | 5.223449 | TCCGACCCATTTGATTATACTCC | 57.777 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
275 | 276 | 6.090898 | CGATTCCGACCCATTTGATTATACTC | 59.909 | 42.308 | 0.00 | 0.00 | 38.22 | 2.59 |
276 | 277 | 5.932303 | CGATTCCGACCCATTTGATTATACT | 59.068 | 40.000 | 0.00 | 0.00 | 38.22 | 2.12 |
277 | 278 | 5.121768 | CCGATTCCGACCCATTTGATTATAC | 59.878 | 44.000 | 0.00 | 0.00 | 38.22 | 1.47 |
278 | 279 | 5.012251 | TCCGATTCCGACCCATTTGATTATA | 59.988 | 40.000 | 0.00 | 0.00 | 38.22 | 0.98 |
279 | 280 | 4.072131 | CCGATTCCGACCCATTTGATTAT | 58.928 | 43.478 | 0.00 | 0.00 | 38.22 | 1.28 |
283 | 284 | 0.906066 | TCCGATTCCGACCCATTTGA | 59.094 | 50.000 | 0.00 | 0.00 | 38.22 | 2.69 |
293 | 294 | 2.309528 | TGGAAGAACATCCGATTCCG | 57.690 | 50.000 | 0.00 | 0.00 | 43.43 | 4.30 |
299 | 300 | 1.739067 | GGAGGTTGGAAGAACATCCG | 58.261 | 55.000 | 2.77 | 0.00 | 40.61 | 4.18 |
307 | 308 | 0.394899 | GGGATGCTGGAGGTTGGAAG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
317 | 318 | 0.394899 | GAGTTTGGAGGGGATGCTGG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
320 | 321 | 1.034292 | GCAGAGTTTGGAGGGGATGC | 61.034 | 60.000 | 0.00 | 0.00 | 0.00 | 3.91 |
325 | 326 | 1.672356 | CCACGCAGAGTTTGGAGGG | 60.672 | 63.158 | 0.00 | 0.00 | 31.39 | 4.30 |
326 | 327 | 2.328099 | GCCACGCAGAGTTTGGAGG | 61.328 | 63.158 | 0.00 | 0.00 | 31.39 | 4.30 |
334 | 335 | 2.436646 | AAATCGGGCCACGCAGAG | 60.437 | 61.111 | 4.39 | 0.00 | 43.86 | 3.35 |
336 | 337 | 4.481112 | GCAAATCGGGCCACGCAG | 62.481 | 66.667 | 4.39 | 0.00 | 43.86 | 5.18 |
342 | 343 | 0.603065 | ACTCAAAAGCAAATCGGGCC | 59.397 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
375 | 376 | 3.181436 | ACCATTGCATAGATTCCCTCCAG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
380 | 381 | 3.228188 | TCCACCATTGCATAGATTCCC | 57.772 | 47.619 | 0.00 | 0.00 | 0.00 | 3.97 |
385 | 386 | 3.053768 | TGGTTGATCCACCATTGCATAGA | 60.054 | 43.478 | 14.51 | 0.00 | 42.27 | 1.98 |
393 | 394 | 2.774234 | CCTCTACTGGTTGATCCACCAT | 59.226 | 50.000 | 18.40 | 11.38 | 46.16 | 3.55 |
421 | 431 | 1.534163 | GTTCCCCTAGTGTTTCGTTGC | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
445 | 455 | 2.125753 | CTCTGCACGTCTGCTCCC | 60.126 | 66.667 | 0.00 | 0.00 | 44.57 | 4.30 |
460 | 470 | 4.602340 | TGTGGTACTCCAGTTTCTTCTC | 57.398 | 45.455 | 0.00 | 0.00 | 45.24 | 2.87 |
475 | 485 | 0.916086 | GACCATGTGGGGATGTGGTA | 59.084 | 55.000 | 3.77 | 0.00 | 44.56 | 3.25 |
491 | 501 | 3.194968 | TCAGGACTTTCGGAATACTGACC | 59.805 | 47.826 | 2.77 | 0.09 | 0.00 | 4.02 |
497 | 507 | 5.414454 | CCATGTTTTCAGGACTTTCGGAATA | 59.586 | 40.000 | 0.00 | 0.00 | 32.95 | 1.75 |
502 | 512 | 4.455533 | TCATCCATGTTTTCAGGACTTTCG | 59.544 | 41.667 | 0.00 | 0.00 | 32.95 | 3.46 |
503 | 513 | 5.964958 | TCATCCATGTTTTCAGGACTTTC | 57.035 | 39.130 | 0.00 | 0.00 | 32.95 | 2.62 |
504 | 514 | 6.494491 | TCATTCATCCATGTTTTCAGGACTTT | 59.506 | 34.615 | 0.00 | 0.00 | 32.95 | 2.66 |
529 | 614 | 9.768215 | TTCCTTACTTCCTTTTATCAATCCATT | 57.232 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
542 | 627 | 9.102453 | AGACTAGTTGTATTTCCTTACTTCCTT | 57.898 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
549 | 725 | 8.117956 | TCCCACTAGACTAGTTGTATTTCCTTA | 58.882 | 37.037 | 12.62 | 0.00 | 36.76 | 2.69 |
581 | 757 | 3.453717 | AGATGCACATCACCACTACTGAT | 59.546 | 43.478 | 12.87 | 0.00 | 40.22 | 2.90 |
582 | 758 | 2.833943 | AGATGCACATCACCACTACTGA | 59.166 | 45.455 | 12.87 | 0.00 | 40.22 | 3.41 |
583 | 759 | 2.934553 | CAGATGCACATCACCACTACTG | 59.065 | 50.000 | 12.87 | 0.00 | 40.22 | 2.74 |
589 | 765 | 1.624813 | TGACTCAGATGCACATCACCA | 59.375 | 47.619 | 12.87 | 1.10 | 40.22 | 4.17 |
590 | 766 | 2.391616 | TGACTCAGATGCACATCACC | 57.608 | 50.000 | 12.87 | 0.00 | 40.22 | 4.02 |
597 | 773 | 2.223900 | GGTGATCGATGACTCAGATGCA | 60.224 | 50.000 | 14.74 | 0.00 | 0.00 | 3.96 |
602 | 778 | 2.027385 | TGGAGGTGATCGATGACTCAG | 58.973 | 52.381 | 14.74 | 0.00 | 0.00 | 3.35 |
712 | 888 | 6.435428 | TCTATTGTTTCTTTGGTTTCGCTTC | 58.565 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
713 | 889 | 6.385649 | TCTATTGTTTCTTTGGTTTCGCTT | 57.614 | 33.333 | 0.00 | 0.00 | 0.00 | 4.68 |
714 | 890 | 5.048713 | CCTCTATTGTTTCTTTGGTTTCGCT | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 4.93 |
816 | 1008 | 3.320256 | AGGGAAAAAGCAAAAGAGAGCAG | 59.680 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
821 | 1013 | 4.502087 | CCTCCAAGGGAAAAAGCAAAAGAG | 60.502 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
874 | 1073 | 0.196118 | ACAGAGGAAGGAAGGGGGAA | 59.804 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
875 | 1074 | 0.252742 | GACAGAGGAAGGAAGGGGGA | 60.253 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
893 | 1103 | 0.536724 | AGTGCTGTCACACACACAGA | 59.463 | 50.000 | 11.53 | 0.00 | 43.54 | 3.41 |
894 | 1104 | 1.063027 | CAAGTGCTGTCACACACACAG | 59.937 | 52.381 | 11.53 | 0.00 | 45.49 | 3.66 |
1115 | 1330 | 2.682136 | TGGAGATCCGTTGGGCGA | 60.682 | 61.111 | 0.00 | 0.00 | 44.77 | 5.54 |
1121 | 1336 | 1.890894 | CGTCTGGTGGAGATCCGTT | 59.109 | 57.895 | 0.00 | 0.00 | 39.43 | 4.44 |
1211 | 1426 | 1.722011 | GGACGATCCAGCGAGAAAAA | 58.278 | 50.000 | 0.00 | 0.00 | 36.28 | 1.94 |
1214 | 1433 | 1.101635 | ATCGGACGATCCAGCGAGAA | 61.102 | 55.000 | 0.65 | 0.00 | 35.91 | 2.87 |
1256 | 1475 | 3.003173 | CTGGACGGGGGAGAAGCA | 61.003 | 66.667 | 0.00 | 0.00 | 0.00 | 3.91 |
1259 | 1478 | 1.382695 | GATCCTGGACGGGGGAGAA | 60.383 | 63.158 | 0.00 | 0.00 | 34.89 | 2.87 |
1260 | 1479 | 2.282446 | GATCCTGGACGGGGGAGA | 59.718 | 66.667 | 0.00 | 0.00 | 34.89 | 3.71 |
1263 | 1482 | 3.849951 | CGTGATCCTGGACGGGGG | 61.850 | 72.222 | 0.00 | 0.00 | 31.84 | 5.40 |
1581 | 1800 | 0.123266 | AGAGAAGGGGGAAATGGGGA | 59.877 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1583 | 1802 | 4.542906 | AAATAGAGAAGGGGGAAATGGG | 57.457 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
1686 | 1908 | 4.641989 | CCAACATAGAAGGATTTGACCTGG | 59.358 | 45.833 | 0.00 | 0.00 | 40.49 | 4.45 |
1780 | 2002 | 8.154420 | AGGGAAAATTGATTTGAGAATCCAAT | 57.846 | 30.769 | 6.50 | 0.00 | 40.79 | 3.16 |
1822 | 2044 | 6.127394 | ACCATGTTATGTTGCTGCATATTTCA | 60.127 | 34.615 | 1.84 | 5.22 | 32.16 | 2.69 |
1823 | 2045 | 6.199531 | CACCATGTTATGTTGCTGCATATTTC | 59.800 | 38.462 | 1.84 | 0.01 | 32.16 | 2.17 |
1824 | 2046 | 6.044046 | CACCATGTTATGTTGCTGCATATTT | 58.956 | 36.000 | 1.84 | 0.00 | 32.16 | 1.40 |
1825 | 2047 | 5.127519 | ACACCATGTTATGTTGCTGCATATT | 59.872 | 36.000 | 1.84 | 0.00 | 32.16 | 1.28 |
1826 | 2048 | 4.646040 | ACACCATGTTATGTTGCTGCATAT | 59.354 | 37.500 | 1.84 | 4.13 | 32.16 | 1.78 |
1927 | 2149 | 3.655211 | CCAGGTGCCAGCTTCCCT | 61.655 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2263 | 2485 | 3.462483 | ACACAATACAGTTGACGACCA | 57.538 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
2264 | 2486 | 5.165676 | TGATACACAATACAGTTGACGACC | 58.834 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2388 | 2610 | 1.550065 | GACATCTCACCACATCGACG | 58.450 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
2472 | 2742 | 7.975616 | GCTCAGAATAATTAATTTGCAGTTGGA | 59.024 | 33.333 | 5.91 | 0.00 | 0.00 | 3.53 |
2546 | 2816 | 6.403866 | TGCTGTCAAAGATAACCATTTGTT | 57.596 | 33.333 | 0.00 | 0.00 | 41.11 | 2.83 |
2627 | 2897 | 6.016024 | AGCTTTGCTGAAAGAACATGAATACA | 60.016 | 34.615 | 0.00 | 0.00 | 41.12 | 2.29 |
2671 | 2943 | 2.627945 | TGGCAGAAGTATAAACCGCAG | 58.372 | 47.619 | 0.00 | 0.00 | 0.00 | 5.18 |
2674 | 2946 | 4.260784 | GCAGAATGGCAGAAGTATAAACCG | 60.261 | 45.833 | 0.00 | 0.00 | 35.86 | 4.44 |
2715 | 2987 | 0.385029 | GCCATGGATGCACGCATTAA | 59.615 | 50.000 | 18.40 | 0.00 | 36.70 | 1.40 |
3094 | 3366 | 7.860373 | TGTGCTTGAAAAACATGTTATAGACAC | 59.140 | 33.333 | 12.39 | 14.01 | 42.04 | 3.67 |
3140 | 3412 | 5.505173 | AAGAATATTCTCCGCAAACATGG | 57.495 | 39.130 | 18.19 | 0.00 | 36.28 | 3.66 |
3254 | 3526 | 3.415212 | TCAAATTTGAGAGCCACCAGAG | 58.585 | 45.455 | 16.91 | 0.00 | 32.50 | 3.35 |
3412 | 3694 | 4.928020 | GGTTAAGAGTTAGTTGTTCGGAGG | 59.072 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3456 | 3738 | 2.160205 | TCAGTACAGAGGGAGAACACG | 58.840 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 |
3599 | 3881 | 4.085415 | GCTTGAACTTTCGTTTGCATTCAG | 60.085 | 41.667 | 0.00 | 0.00 | 32.39 | 3.02 |
3635 | 3917 | 3.069443 | TCCCTGCACACAAAAATCCTTTC | 59.931 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
3681 | 3966 | 4.389374 | CCAGTCTAGCAAAGTTTGGAAGA | 58.611 | 43.478 | 17.11 | 3.11 | 34.00 | 2.87 |
3769 | 4054 | 5.842907 | AGCATGCTTACATAACATAGTCGA | 58.157 | 37.500 | 16.30 | 0.00 | 33.67 | 4.20 |
3872 | 4157 | 5.928839 | CCTCTACAAAACCCATATCATCTCG | 59.071 | 44.000 | 0.00 | 0.00 | 0.00 | 4.04 |
3911 | 4196 | 3.120923 | GGAGAAAACAAATGCGCACATTG | 60.121 | 43.478 | 27.14 | 27.14 | 45.90 | 2.82 |
4012 | 4299 | 3.139077 | GTCCTGTCAAGACCGACAAAAT | 58.861 | 45.455 | 10.78 | 0.00 | 44.97 | 1.82 |
4050 | 4337 | 4.767928 | ACACTTTGAGATCTCCGAACTACT | 59.232 | 41.667 | 20.03 | 0.00 | 0.00 | 2.57 |
4064 | 4351 | 8.167985 | CCAACACAAATTTAACAACACTTTGAG | 58.832 | 33.333 | 0.00 | 0.00 | 36.48 | 3.02 |
4122 | 4410 | 0.107703 | TTCCCGGCTCATCATCACAC | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
4137 | 4425 | 2.867647 | GCAAAGACATTGTTGCCTTCCC | 60.868 | 50.000 | 1.28 | 0.00 | 43.49 | 3.97 |
4231 | 4522 | 7.604164 | ACACAGGACATCATCTACAACTAAAAG | 59.396 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
4237 | 4528 | 4.997395 | ACAACACAGGACATCATCTACAAC | 59.003 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
4296 | 4588 | 1.137872 | CAGTGTCTGATCTACCCAGCC | 59.862 | 57.143 | 0.00 | 0.00 | 32.44 | 4.85 |
4338 | 4630 | 6.278363 | ACTACTAGTGCTCTCGTTTCAAAAA | 58.722 | 36.000 | 5.39 | 0.00 | 0.00 | 1.94 |
4339 | 4631 | 5.839621 | ACTACTAGTGCTCTCGTTTCAAAA | 58.160 | 37.500 | 5.39 | 0.00 | 0.00 | 2.44 |
4340 | 4632 | 5.449107 | ACTACTAGTGCTCTCGTTTCAAA | 57.551 | 39.130 | 5.39 | 0.00 | 0.00 | 2.69 |
4341 | 4633 | 5.449107 | AACTACTAGTGCTCTCGTTTCAA | 57.551 | 39.130 | 5.39 | 0.00 | 0.00 | 2.69 |
4342 | 4634 | 5.449107 | AAACTACTAGTGCTCTCGTTTCA | 57.551 | 39.130 | 5.39 | 0.00 | 0.00 | 2.69 |
4343 | 4635 | 6.766452 | AAAAACTACTAGTGCTCTCGTTTC | 57.234 | 37.500 | 5.39 | 0.00 | 0.00 | 2.78 |
4421 | 4796 | 1.065418 | AGCCTGGCCTAACACATACAC | 60.065 | 52.381 | 16.57 | 0.00 | 0.00 | 2.90 |
4423 | 4798 | 1.065418 | ACAGCCTGGCCTAACACATAC | 60.065 | 52.381 | 16.57 | 0.00 | 0.00 | 2.39 |
4470 | 4845 | 1.549203 | CAAACAGCCTGGCCTAACAT | 58.451 | 50.000 | 16.57 | 0.00 | 0.00 | 2.71 |
4491 | 4866 | 3.704800 | TCACGTCCCCATCAATTAACA | 57.295 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
4493 | 4868 | 4.006989 | CACTTCACGTCCCCATCAATTAA | 58.993 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
4501 | 4876 | 1.003839 | GCATCACTTCACGTCCCCA | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
4549 | 4924 | 2.762327 | ACCATTGTCAGCCATTTGATCC | 59.238 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
4593 | 4968 | 1.008995 | GCTGCTTTTTCGTGCCGAA | 60.009 | 52.632 | 6.01 | 6.01 | 44.28 | 4.30 |
4594 | 4969 | 2.183504 | TGCTGCTTTTTCGTGCCGA | 61.184 | 52.632 | 0.00 | 0.00 | 0.00 | 5.54 |
4595 | 4970 | 2.010817 | GTGCTGCTTTTTCGTGCCG | 61.011 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
4596 | 4971 | 0.527385 | TTGTGCTGCTTTTTCGTGCC | 60.527 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4597 | 4972 | 0.848305 | CTTGTGCTGCTTTTTCGTGC | 59.152 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
4598 | 4973 | 2.111756 | GTCTTGTGCTGCTTTTTCGTG | 58.888 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
4599 | 4974 | 1.742831 | TGTCTTGTGCTGCTTTTTCGT | 59.257 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
4600 | 4975 | 2.223340 | ACTGTCTTGTGCTGCTTTTTCG | 60.223 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
4657 | 5032 | 3.626028 | AAAAGGATGCGTGTTCTCAAC | 57.374 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
4713 | 5088 | 4.133078 | GGCCTCTCATGTATCTTTCTTGG | 58.867 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
4756 | 5137 | 2.506444 | CGTCCCCTCCACTAGTCTATC | 58.494 | 57.143 | 0.00 | 0.00 | 0.00 | 2.08 |
4820 | 5201 | 2.813908 | GGATGGGTGACGCGTGTC | 60.814 | 66.667 | 20.70 | 22.00 | 45.71 | 3.67 |
4821 | 5202 | 2.954684 | ATGGATGGGTGACGCGTGT | 61.955 | 57.895 | 20.70 | 0.00 | 0.00 | 4.49 |
4822 | 5203 | 2.125147 | ATGGATGGGTGACGCGTG | 60.125 | 61.111 | 20.70 | 0.00 | 0.00 | 5.34 |
4823 | 5204 | 2.125147 | CATGGATGGGTGACGCGT | 60.125 | 61.111 | 13.85 | 13.85 | 0.00 | 6.01 |
4824 | 5205 | 3.576356 | GCATGGATGGGTGACGCG | 61.576 | 66.667 | 3.53 | 3.53 | 0.00 | 6.01 |
4825 | 5206 | 3.211963 | GGCATGGATGGGTGACGC | 61.212 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
4826 | 5207 | 1.524621 | GAGGCATGGATGGGTGACG | 60.525 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
4827 | 5208 | 1.152881 | GGAGGCATGGATGGGTGAC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
4828 | 5209 | 2.386100 | GGGAGGCATGGATGGGTGA | 61.386 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
4829 | 5210 | 2.196776 | GGGAGGCATGGATGGGTG | 59.803 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
4830 | 5211 | 3.105928 | GGGGAGGCATGGATGGGT | 61.106 | 66.667 | 0.00 | 0.00 | 0.00 | 4.51 |
4831 | 5212 | 3.907130 | GGGGGAGGCATGGATGGG | 61.907 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
4832 | 5213 | 2.780040 | AGGGGGAGGCATGGATGG | 60.780 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
4833 | 5214 | 2.838467 | GGAGGGGGAGGCATGGATG | 61.838 | 68.421 | 0.00 | 0.00 | 0.00 | 3.51 |
4834 | 5215 | 2.451294 | GGAGGGGGAGGCATGGAT | 60.451 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
4835 | 5216 | 4.843331 | GGGAGGGGGAGGCATGGA | 62.843 | 72.222 | 0.00 | 0.00 | 0.00 | 3.41 |
4846 | 5227 | 2.144859 | TAAAAAGGGCCACGGGAGGG | 62.145 | 60.000 | 6.18 | 0.00 | 0.00 | 4.30 |
4847 | 5228 | 0.679960 | CTAAAAAGGGCCACGGGAGG | 60.680 | 60.000 | 6.18 | 0.00 | 0.00 | 4.30 |
4848 | 5229 | 1.313091 | GCTAAAAAGGGCCACGGGAG | 61.313 | 60.000 | 6.18 | 0.00 | 0.00 | 4.30 |
4849 | 5230 | 1.303806 | GCTAAAAAGGGCCACGGGA | 60.304 | 57.895 | 6.18 | 0.00 | 0.00 | 5.14 |
4850 | 5231 | 2.348104 | GGCTAAAAAGGGCCACGGG | 61.348 | 63.158 | 6.18 | 0.00 | 0.00 | 5.28 |
4851 | 5232 | 3.284336 | GGCTAAAAAGGGCCACGG | 58.716 | 61.111 | 6.18 | 0.00 | 0.00 | 4.94 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.