Multiple sequence alignment - TraesCS4B01G138300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G138300 chr4B 100.000 3803 0 0 1 3803 182256596 182260398 0.000000e+00 7023
1 TraesCS4B01G138300 chr4A 88.583 2216 103 37 1657 3801 450762851 450764987 0.000000e+00 2553
2 TraesCS4B01G138300 chr4A 92.214 411 11 6 842 1234 450762217 450762624 2.570000e-156 562
3 TraesCS4B01G138300 chr4A 86.780 469 40 12 1 465 450761691 450762141 1.580000e-138 503
4 TraesCS4B01G138300 chr4A 93.750 256 7 6 1290 1537 450762638 450762892 3.590000e-100 375
5 TraesCS4B01G138300 chr4A 87.671 292 27 6 478 765 583161331 583161045 7.870000e-87 331
6 TraesCS4B01G138300 chr4D 93.849 1138 47 3 2077 3192 119803766 119804902 0.000000e+00 1692
7 TraesCS4B01G138300 chr4D 95.532 649 24 5 893 1537 119802462 119803109 0.000000e+00 1033
8 TraesCS4B01G138300 chr4D 90.374 696 22 14 3143 3803 119805010 119805695 0.000000e+00 872
9 TraesCS4B01G138300 chr4D 87.209 430 47 8 1 428 119801801 119802224 2.050000e-132 483
10 TraesCS4B01G138300 chr4D 84.884 430 25 13 1657 2068 119803069 119803476 7.650000e-107 398
11 TraesCS4B01G138300 chr4D 88.462 286 26 5 478 761 324843151 324843431 4.710000e-89 339
12 TraesCS4B01G138300 chr7D 89.825 285 22 5 478 760 441858647 441858368 3.610000e-95 359
13 TraesCS4B01G138300 chr2D 89.123 285 24 4 478 760 327558761 327559040 7.820000e-92 348
14 TraesCS4B01G138300 chr6A 88.462 286 26 5 478 761 117061998 117062278 4.710000e-89 339
15 TraesCS4B01G138300 chr5A 88.462 286 26 4 478 761 224874959 224875239 4.710000e-89 339
16 TraesCS4B01G138300 chr5A 88.421 285 25 6 478 760 283633285 283633563 1.690000e-88 337
17 TraesCS4B01G138300 chr5A 84.615 104 16 0 1355 1458 338231758 338231655 1.870000e-18 104
18 TraesCS4B01G138300 chr3A 88.462 286 26 5 478 761 667233510 667233230 4.710000e-89 339
19 TraesCS4B01G138300 chr7A 88.380 284 26 5 478 759 343833940 343834218 6.090000e-88 335


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G138300 chr4B 182256596 182260398 3802 False 7023.00 7023 100.00000 1 3803 1 chr4B.!!$F1 3802
1 TraesCS4B01G138300 chr4A 450761691 450764987 3296 False 998.25 2553 90.33175 1 3801 4 chr4A.!!$F1 3800
2 TraesCS4B01G138300 chr4D 119801801 119805695 3894 False 895.60 1692 90.36960 1 3803 5 chr4D.!!$F2 3802

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
481 485 0.031585 TACGGGCTCATTCGGATTCG 59.968 55.0 0.0 0.0 37.82 3.34 F
1475 1508 0.029167 GTCGCTAACGCTCCTACTCC 59.971 60.0 0.0 0.0 39.84 3.85 F
1476 1509 1.099879 TCGCTAACGCTCCTACTCCC 61.100 60.0 0.0 0.0 39.84 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2294 2651 0.250295 TGAAGTTTCCAGGCGGTGAG 60.250 55.000 0.00 0.0 0.00 3.51 R
2295 2652 0.250295 CTGAAGTTTCCAGGCGGTGA 60.250 55.000 0.00 0.0 0.00 4.02 R
3196 3672 1.063174 CTAGTTTCTCAGCATTGCGCC 59.937 52.381 4.18 0.0 44.04 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 1.398739 CGCCGCTCGTATAGATCATCT 59.601 52.381 0.00 0.00 0.00 2.90
63 64 3.441922 GCTCGTATAGATCATCTGCCAGA 59.558 47.826 0.00 0.00 0.00 3.86
88 89 4.868314 AGAACCTTCGTAACTGCTAGTT 57.132 40.909 6.74 6.74 41.97 2.24
119 120 3.320610 TGTTGGGTCAAAAATCCCTCA 57.679 42.857 0.00 0.00 43.74 3.86
120 121 3.647636 TGTTGGGTCAAAAATCCCTCAA 58.352 40.909 0.00 0.00 43.74 3.02
164 165 9.781633 CTCCAAGATAAGAATCAAGATGATCTT 57.218 33.333 0.97 0.97 35.76 2.40
175 176 4.756642 TCAAGATGATCTTTGCGACAACTT 59.243 37.500 4.67 0.00 33.78 2.66
187 188 3.317711 TGCGACAACTTCAATTGAACCAT 59.682 39.130 16.91 3.13 33.57 3.55
224 225 6.422100 GTCGCATCAACATAGATCTTACACAT 59.578 38.462 0.00 0.00 0.00 3.21
239 240 5.880332 TCTTACACATATTTTCAGAGGGTGC 59.120 40.000 0.00 0.00 0.00 5.01
271 272 3.955524 TTGGTCTTACTCCCCACAAAA 57.044 42.857 0.00 0.00 0.00 2.44
273 274 3.827722 TGGTCTTACTCCCCACAAAAAG 58.172 45.455 0.00 0.00 0.00 2.27
275 276 4.105697 TGGTCTTACTCCCCACAAAAAGAT 59.894 41.667 0.00 0.00 0.00 2.40
315 318 1.009903 CGACACGGCGGTTGTATTGA 61.010 55.000 13.24 0.00 0.00 2.57
341 344 5.189180 GGCTTGTCCACAATCTAAAGATCT 58.811 41.667 0.00 0.00 35.02 2.75
342 345 5.065731 GGCTTGTCCACAATCTAAAGATCTG 59.934 44.000 0.00 0.00 35.02 2.90
344 347 6.183360 GCTTGTCCACAATCTAAAGATCTGAC 60.183 42.308 0.00 0.00 35.02 3.51
345 348 6.611613 TGTCCACAATCTAAAGATCTGACT 57.388 37.500 0.00 0.00 32.75 3.41
353 356 9.453572 ACAATCTAAAGATCTGACTTAAATGCA 57.546 29.630 0.00 0.00 32.75 3.96
386 389 1.158904 TGGTGGGTATTGGGGTTTGA 58.841 50.000 0.00 0.00 0.00 2.69
429 433 1.522092 CTCCTTGCGCTCCATACCA 59.478 57.895 9.73 0.00 0.00 3.25
436 440 1.344438 TGCGCTCCATACCATCCTAAG 59.656 52.381 9.73 0.00 0.00 2.18
439 443 2.339769 GCTCCATACCATCCTAAGGGT 58.660 52.381 0.00 0.00 43.39 4.34
466 470 5.866159 AACCTTCCTCCTAAACTATACGG 57.134 43.478 0.00 0.00 0.00 4.02
470 474 3.494332 TCCTCCTAAACTATACGGGCTC 58.506 50.000 0.00 0.00 0.00 4.70
471 475 3.117398 TCCTCCTAAACTATACGGGCTCA 60.117 47.826 0.00 0.00 0.00 4.26
474 478 5.464030 TCCTAAACTATACGGGCTCATTC 57.536 43.478 0.00 0.00 0.00 2.67
475 479 4.022589 TCCTAAACTATACGGGCTCATTCG 60.023 45.833 0.00 0.00 0.00 3.34
481 485 0.031585 TACGGGCTCATTCGGATTCG 59.968 55.000 0.00 0.00 37.82 3.34
482 486 1.956170 CGGGCTCATTCGGATTCGG 60.956 63.158 0.00 0.00 36.95 4.30
484 488 0.463833 GGGCTCATTCGGATTCGGTT 60.464 55.000 0.00 0.00 36.95 4.44
486 490 1.064060 GGCTCATTCGGATTCGGTTTG 59.936 52.381 0.00 0.00 36.95 2.93
487 491 1.064060 GCTCATTCGGATTCGGTTTGG 59.936 52.381 0.00 0.00 36.95 3.28
489 493 2.609459 CTCATTCGGATTCGGTTTGGAG 59.391 50.000 0.00 0.00 36.95 3.86
490 494 1.670811 CATTCGGATTCGGTTTGGAGG 59.329 52.381 0.00 0.00 36.95 4.30
491 495 0.035820 TTCGGATTCGGTTTGGAGGG 60.036 55.000 0.00 0.00 36.95 4.30
492 496 1.196104 TCGGATTCGGTTTGGAGGGT 61.196 55.000 0.00 0.00 36.95 4.34
494 498 1.884928 CGGATTCGGTTTGGAGGGTTT 60.885 52.381 0.00 0.00 0.00 3.27
497 501 2.438800 TTCGGTTTGGAGGGTTTTCA 57.561 45.000 0.00 0.00 0.00 2.69
498 502 2.668144 TCGGTTTGGAGGGTTTTCAT 57.332 45.000 0.00 0.00 0.00 2.57
500 504 3.681593 TCGGTTTGGAGGGTTTTCATAG 58.318 45.455 0.00 0.00 0.00 2.23
501 505 2.752903 CGGTTTGGAGGGTTTTCATAGG 59.247 50.000 0.00 0.00 0.00 2.57
502 506 3.560453 CGGTTTGGAGGGTTTTCATAGGA 60.560 47.826 0.00 0.00 0.00 2.94
504 508 4.836175 GGTTTGGAGGGTTTTCATAGGAAA 59.164 41.667 0.00 0.00 41.13 3.13
524 528 7.840931 AGGAAAAACATATGAACAAGGATTCC 58.159 34.615 10.38 10.58 33.36 3.01
525 529 6.751888 GGAAAAACATATGAACAAGGATTCCG 59.248 38.462 10.38 0.00 0.00 4.30
527 531 3.820557 ACATATGAACAAGGATTCCGGG 58.179 45.455 10.38 0.00 0.00 5.73
528 532 3.458118 ACATATGAACAAGGATTCCGGGA 59.542 43.478 10.38 0.00 0.00 5.14
529 533 4.080015 ACATATGAACAAGGATTCCGGGAA 60.080 41.667 12.67 12.67 0.00 3.97
530 534 2.961531 TGAACAAGGATTCCGGGAAA 57.038 45.000 14.45 0.00 0.00 3.13
531 535 2.790433 TGAACAAGGATTCCGGGAAAG 58.210 47.619 14.45 4.50 0.00 2.62
534 538 3.739401 ACAAGGATTCCGGGAAAGATT 57.261 42.857 14.45 5.78 0.00 2.40
535 539 3.621558 ACAAGGATTCCGGGAAAGATTC 58.378 45.455 14.45 6.56 0.00 2.52
551 555 8.147642 GGAAAGATTCCTATATATGCATTCGG 57.852 38.462 3.54 0.00 46.57 4.30
552 556 7.770897 GGAAAGATTCCTATATATGCATTCGGT 59.229 37.037 3.54 0.00 46.57 4.69
553 557 9.167311 GAAAGATTCCTATATATGCATTCGGTT 57.833 33.333 3.54 0.00 0.00 4.44
554 558 9.520515 AAAGATTCCTATATATGCATTCGGTTT 57.479 29.630 3.54 0.00 0.00 3.27
555 559 8.498054 AGATTCCTATATATGCATTCGGTTTG 57.502 34.615 3.54 0.00 0.00 2.93
558 562 8.542497 TTCCTATATATGCATTCGGTTTGTAC 57.458 34.615 3.54 0.00 0.00 2.90
559 563 6.809689 TCCTATATATGCATTCGGTTTGTACG 59.190 38.462 3.54 0.00 0.00 3.67
560 564 6.809689 CCTATATATGCATTCGGTTTGTACGA 59.190 38.462 3.54 0.00 38.78 3.43
561 565 6.706055 ATATATGCATTCGGTTTGTACGAG 57.294 37.500 3.54 0.00 41.81 4.18
563 567 2.967362 TGCATTCGGTTTGTACGAGAT 58.033 42.857 0.00 0.00 41.81 2.75
564 568 2.670905 TGCATTCGGTTTGTACGAGATG 59.329 45.455 0.00 0.00 41.81 2.90
565 569 2.536928 GCATTCGGTTTGTACGAGATGC 60.537 50.000 14.15 14.15 41.95 3.91
566 570 5.868268 GCATTCGGTTTGTACGAGATGCG 62.868 52.174 14.15 0.00 40.79 4.73
579 583 3.838839 CGAGATGCGTACAGAAAATTCG 58.161 45.455 0.00 0.00 34.64 3.34
580 584 3.303495 CGAGATGCGTACAGAAAATTCGT 59.697 43.478 0.00 0.00 34.64 3.85
581 585 4.497966 CGAGATGCGTACAGAAAATTCGTA 59.502 41.667 0.00 0.00 34.64 3.43
582 586 5.330866 CGAGATGCGTACAGAAAATTCGTAG 60.331 44.000 0.00 0.00 34.64 3.51
583 587 4.804139 AGATGCGTACAGAAAATTCGTAGG 59.196 41.667 0.00 10.55 0.00 3.18
585 589 4.558178 TGCGTACAGAAAATTCGTAGGAA 58.442 39.130 0.00 0.00 36.41 3.36
586 590 5.172934 TGCGTACAGAAAATTCGTAGGAAT 58.827 37.500 4.83 4.83 44.69 3.01
587 591 6.331845 TGCGTACAGAAAATTCGTAGGAATA 58.668 36.000 10.88 0.00 41.99 1.75
589 593 6.474751 GCGTACAGAAAATTCGTAGGAATACT 59.525 38.462 10.88 8.34 41.99 2.12
590 594 7.645340 GCGTACAGAAAATTCGTAGGAATACTA 59.355 37.037 10.88 0.00 41.99 1.82
591 595 8.951969 CGTACAGAAAATTCGTAGGAATACTAC 58.048 37.037 10.88 0.00 46.94 2.73
602 606 6.402456 GTAGGAATACTACTCATTTCCCGT 57.598 41.667 0.00 0.00 46.89 5.28
604 608 4.715297 AGGAATACTACTCATTTCCCGTGT 59.285 41.667 0.00 0.00 38.73 4.49
605 609 5.189145 AGGAATACTACTCATTTCCCGTGTT 59.811 40.000 0.00 0.00 38.73 3.32
607 611 6.373495 GGAATACTACTCATTTCCCGTGTTTT 59.627 38.462 0.00 0.00 33.08 2.43
608 612 7.094506 GGAATACTACTCATTTCCCGTGTTTTT 60.095 37.037 0.00 0.00 33.08 1.94
609 613 5.432885 ACTACTCATTTCCCGTGTTTTTG 57.567 39.130 0.00 0.00 0.00 2.44
610 614 5.127491 ACTACTCATTTCCCGTGTTTTTGA 58.873 37.500 0.00 0.00 0.00 2.69
611 615 4.993029 ACTCATTTCCCGTGTTTTTGAA 57.007 36.364 0.00 0.00 0.00 2.69
612 616 4.932146 ACTCATTTCCCGTGTTTTTGAAG 58.068 39.130 0.00 0.00 0.00 3.02
613 617 4.202111 ACTCATTTCCCGTGTTTTTGAAGG 60.202 41.667 0.00 0.00 0.00 3.46
614 618 3.954904 TCATTTCCCGTGTTTTTGAAGGA 59.045 39.130 0.00 0.00 0.00 3.36
615 619 4.402793 TCATTTCCCGTGTTTTTGAAGGAA 59.597 37.500 0.00 0.00 0.00 3.36
617 621 3.786516 TCCCGTGTTTTTGAAGGAAAC 57.213 42.857 0.00 0.00 37.48 2.78
618 622 5.105106 ATTTCCCGTGTTTTTGAAGGAAACT 60.105 36.000 4.28 0.00 43.91 2.66
619 623 4.525024 TCCCGTGTTTTTGAAGGAAACTA 58.475 39.130 0.00 0.00 42.68 2.24
620 624 4.336153 TCCCGTGTTTTTGAAGGAAACTAC 59.664 41.667 0.00 0.00 42.68 2.73
621 625 4.096682 CCCGTGTTTTTGAAGGAAACTACA 59.903 41.667 0.00 0.00 42.68 2.74
622 626 5.032220 CCGTGTTTTTGAAGGAAACTACAC 58.968 41.667 0.00 0.00 42.68 2.90
623 627 5.392165 CCGTGTTTTTGAAGGAAACTACACA 60.392 40.000 0.00 0.00 42.68 3.72
624 628 6.262601 CGTGTTTTTGAAGGAAACTACACAT 58.737 36.000 0.00 0.00 42.68 3.21
625 629 6.413818 CGTGTTTTTGAAGGAAACTACACATC 59.586 38.462 0.00 0.00 42.68 3.06
626 630 6.695713 GTGTTTTTGAAGGAAACTACACATCC 59.304 38.462 0.00 0.00 42.68 3.51
627 631 6.378564 TGTTTTTGAAGGAAACTACACATCCA 59.621 34.615 0.00 0.00 42.68 3.41
628 632 6.385649 TTTTGAAGGAAACTACACATCCAC 57.614 37.500 0.00 0.00 42.68 4.02
629 633 4.974645 TGAAGGAAACTACACATCCACT 57.025 40.909 0.00 0.00 42.68 4.00
630 634 4.894784 TGAAGGAAACTACACATCCACTC 58.105 43.478 0.00 0.00 42.68 3.51
631 635 4.346709 TGAAGGAAACTACACATCCACTCA 59.653 41.667 0.00 0.00 42.68 3.41
632 636 4.974645 AGGAAACTACACATCCACTCAA 57.025 40.909 0.00 0.00 40.61 3.02
633 637 5.304686 AGGAAACTACACATCCACTCAAA 57.695 39.130 0.00 0.00 40.61 2.69
634 638 5.880901 AGGAAACTACACATCCACTCAAAT 58.119 37.500 0.00 0.00 40.61 2.32
635 639 5.940470 AGGAAACTACACATCCACTCAAATC 59.060 40.000 0.00 0.00 40.61 2.17
636 640 5.940470 GGAAACTACACATCCACTCAAATCT 59.060 40.000 0.00 0.00 33.30 2.40
637 641 6.092807 GGAAACTACACATCCACTCAAATCTC 59.907 42.308 0.00 0.00 33.30 2.75
638 642 5.745312 ACTACACATCCACTCAAATCTCA 57.255 39.130 0.00 0.00 0.00 3.27
639 643 6.305272 ACTACACATCCACTCAAATCTCAT 57.695 37.500 0.00 0.00 0.00 2.90
640 644 6.715280 ACTACACATCCACTCAAATCTCATT 58.285 36.000 0.00 0.00 0.00 2.57
641 645 7.170965 ACTACACATCCACTCAAATCTCATTT 58.829 34.615 0.00 0.00 0.00 2.32
642 646 6.906157 ACACATCCACTCAAATCTCATTTT 57.094 33.333 0.00 0.00 0.00 1.82
643 647 6.684686 ACACATCCACTCAAATCTCATTTTG 58.315 36.000 0.00 0.00 37.83 2.44
644 648 5.575606 CACATCCACTCAAATCTCATTTTGC 59.424 40.000 0.00 0.00 36.69 3.68
645 649 4.424061 TCCACTCAAATCTCATTTTGCG 57.576 40.909 0.00 0.00 36.69 4.85
646 650 2.919229 CCACTCAAATCTCATTTTGCGC 59.081 45.455 0.00 0.00 36.69 6.09
647 651 2.591148 CACTCAAATCTCATTTTGCGCG 59.409 45.455 0.00 0.00 36.69 6.86
648 652 2.226437 ACTCAAATCTCATTTTGCGCGT 59.774 40.909 8.43 0.00 36.69 6.01
649 653 3.435327 ACTCAAATCTCATTTTGCGCGTA 59.565 39.130 8.43 0.00 36.69 4.42
650 654 3.742786 TCAAATCTCATTTTGCGCGTAC 58.257 40.909 8.43 0.00 36.69 3.67
651 655 3.187432 TCAAATCTCATTTTGCGCGTACA 59.813 39.130 8.43 0.00 36.69 2.90
652 656 3.822594 AATCTCATTTTGCGCGTACAA 57.177 38.095 8.43 2.21 0.00 2.41
653 657 3.822594 ATCTCATTTTGCGCGTACAAA 57.177 38.095 8.43 7.97 37.74 2.83
654 658 2.911120 TCTCATTTTGCGCGTACAAAC 58.089 42.857 8.43 0.00 39.18 2.93
655 659 8.724252 CAAATCTCATTTTGCGCGTACAAACG 62.724 42.308 8.43 4.89 39.18 3.60
668 672 4.483476 GTACAAACGAGGCAAGTCAATT 57.517 40.909 0.00 0.00 0.00 2.32
669 673 3.626028 ACAAACGAGGCAAGTCAATTC 57.374 42.857 0.00 0.00 0.00 2.17
670 674 2.293399 ACAAACGAGGCAAGTCAATTCC 59.707 45.455 0.00 0.00 0.00 3.01
671 675 2.554032 CAAACGAGGCAAGTCAATTCCT 59.446 45.455 0.00 0.00 0.00 3.36
672 676 2.568623 ACGAGGCAAGTCAATTCCTT 57.431 45.000 0.00 0.00 0.00 3.36
673 677 3.695830 ACGAGGCAAGTCAATTCCTTA 57.304 42.857 0.00 0.00 0.00 2.69
674 678 3.600388 ACGAGGCAAGTCAATTCCTTAG 58.400 45.455 0.00 0.00 0.00 2.18
675 679 3.260884 ACGAGGCAAGTCAATTCCTTAGA 59.739 43.478 0.00 0.00 0.00 2.10
676 680 4.253685 CGAGGCAAGTCAATTCCTTAGAA 58.746 43.478 0.00 0.00 36.15 2.10
677 681 4.878397 CGAGGCAAGTCAATTCCTTAGAAT 59.122 41.667 0.00 0.00 44.86 2.40
678 682 5.220739 CGAGGCAAGTCAATTCCTTAGAATG 60.221 44.000 0.00 0.00 42.03 2.67
679 683 4.952335 AGGCAAGTCAATTCCTTAGAATGG 59.048 41.667 0.00 0.00 42.03 3.16
680 684 4.440663 GGCAAGTCAATTCCTTAGAATGGC 60.441 45.833 0.00 0.00 42.03 4.40
681 685 4.158394 GCAAGTCAATTCCTTAGAATGGCA 59.842 41.667 0.00 0.00 42.03 4.92
682 686 5.336690 GCAAGTCAATTCCTTAGAATGGCAA 60.337 40.000 0.00 0.00 42.03 4.52
683 687 6.690530 CAAGTCAATTCCTTAGAATGGCAAA 58.309 36.000 0.00 0.00 42.03 3.68
684 688 7.325694 CAAGTCAATTCCTTAGAATGGCAAAT 58.674 34.615 0.00 0.00 42.03 2.32
685 689 6.870769 AGTCAATTCCTTAGAATGGCAAATG 58.129 36.000 0.00 0.00 42.03 2.32
686 690 6.438425 AGTCAATTCCTTAGAATGGCAAATGT 59.562 34.615 0.00 0.00 42.03 2.71
687 691 6.753744 GTCAATTCCTTAGAATGGCAAATGTC 59.246 38.462 0.00 0.00 42.03 3.06
688 692 6.436847 TCAATTCCTTAGAATGGCAAATGTCA 59.563 34.615 0.00 0.00 42.03 3.58
689 693 7.124599 TCAATTCCTTAGAATGGCAAATGTCAT 59.875 33.333 0.00 0.00 42.03 3.06
690 694 6.455360 TTCCTTAGAATGGCAAATGTCATC 57.545 37.500 0.29 0.00 39.84 2.92
691 695 4.889409 TCCTTAGAATGGCAAATGTCATCC 59.111 41.667 0.29 0.00 39.84 3.51
692 696 4.891756 CCTTAGAATGGCAAATGTCATCCT 59.108 41.667 0.29 0.00 39.84 3.24
693 697 6.064060 CCTTAGAATGGCAAATGTCATCCTA 58.936 40.000 0.29 0.00 39.84 2.94
694 698 6.718454 CCTTAGAATGGCAAATGTCATCCTAT 59.282 38.462 0.29 0.00 39.84 2.57
695 699 7.094463 CCTTAGAATGGCAAATGTCATCCTATC 60.094 40.741 0.29 0.00 39.84 2.08
696 700 5.698104 AGAATGGCAAATGTCATCCTATCA 58.302 37.500 0.29 0.00 39.84 2.15
697 701 6.131264 AGAATGGCAAATGTCATCCTATCAA 58.869 36.000 0.29 0.00 39.84 2.57
698 702 6.608405 AGAATGGCAAATGTCATCCTATCAAA 59.392 34.615 0.29 0.00 39.84 2.69
699 703 6.989155 ATGGCAAATGTCATCCTATCAAAT 57.011 33.333 0.00 0.00 34.97 2.32
700 704 6.795144 TGGCAAATGTCATCCTATCAAATT 57.205 33.333 0.00 0.00 0.00 1.82
701 705 6.808829 TGGCAAATGTCATCCTATCAAATTC 58.191 36.000 0.00 0.00 0.00 2.17
702 706 6.183360 TGGCAAATGTCATCCTATCAAATTCC 60.183 38.462 0.00 0.00 0.00 3.01
703 707 6.041296 GGCAAATGTCATCCTATCAAATTCCT 59.959 38.462 0.00 0.00 0.00 3.36
704 708 7.231317 GGCAAATGTCATCCTATCAAATTCCTA 59.769 37.037 0.00 0.00 0.00 2.94
705 709 8.800332 GCAAATGTCATCCTATCAAATTCCTAT 58.200 33.333 0.00 0.00 0.00 2.57
720 724 9.322769 TCAAATTCCTATACTACTCCTAATCCC 57.677 37.037 0.00 0.00 0.00 3.85
721 725 9.327731 CAAATTCCTATACTACTCCTAATCCCT 57.672 37.037 0.00 0.00 0.00 4.20
723 727 9.994017 AATTCCTATACTACTCCTAATCCCTAC 57.006 37.037 0.00 0.00 0.00 3.18
724 728 8.529952 TTCCTATACTACTCCTAATCCCTACA 57.470 38.462 0.00 0.00 0.00 2.74
725 729 8.529952 TCCTATACTACTCCTAATCCCTACAA 57.470 38.462 0.00 0.00 0.00 2.41
726 730 9.136828 TCCTATACTACTCCTAATCCCTACAAT 57.863 37.037 0.00 0.00 0.00 2.71
732 736 9.448587 ACTACTCCTAATCCCTACAATACATTT 57.551 33.333 0.00 0.00 0.00 2.32
753 757 8.987890 ACATTTTAATTTCCTTCAAACCGAATG 58.012 29.630 0.00 0.00 31.69 2.67
754 758 9.202273 CATTTTAATTTCCTTCAAACCGAATGA 57.798 29.630 0.00 0.00 31.69 2.57
755 759 8.810652 TTTTAATTTCCTTCAAACCGAATGAG 57.189 30.769 0.00 0.00 31.01 2.90
756 760 3.915437 TTTCCTTCAAACCGAATGAGC 57.085 42.857 0.00 0.00 31.01 4.26
757 761 1.821216 TCCTTCAAACCGAATGAGCC 58.179 50.000 0.00 0.00 31.69 4.70
758 762 0.811281 CCTTCAAACCGAATGAGCCC 59.189 55.000 0.00 0.00 31.69 5.19
759 763 1.614317 CCTTCAAACCGAATGAGCCCT 60.614 52.381 0.00 0.00 31.69 5.19
760 764 1.470098 CTTCAAACCGAATGAGCCCTG 59.530 52.381 0.00 0.00 31.69 4.45
764 768 0.546122 AACCGAATGAGCCCTGCATA 59.454 50.000 0.00 0.00 0.00 3.14
787 791 4.142004 ACCGTACTTGAGTGGATCCAATAC 60.142 45.833 18.20 9.04 0.00 1.89
794 798 3.386402 TGAGTGGATCCAATACACGCATA 59.614 43.478 18.20 0.00 46.79 3.14
798 802 4.326278 GTGGATCCAATACACGCATATACG 59.674 45.833 18.20 0.00 33.80 3.06
799 803 3.863424 GGATCCAATACACGCATATACGG 59.137 47.826 6.95 0.00 37.37 4.02
801 805 4.168922 TCCAATACACGCATATACGGAG 57.831 45.455 0.00 0.00 37.37 4.63
819 823 6.961360 ACGGAGTACATATGAATGAGAAGA 57.039 37.500 10.38 0.00 41.94 2.87
820 824 7.348080 ACGGAGTACATATGAATGAGAAGAA 57.652 36.000 10.38 0.00 41.94 2.52
821 825 7.782049 ACGGAGTACATATGAATGAGAAGAAA 58.218 34.615 10.38 0.00 41.94 2.52
822 826 7.923344 ACGGAGTACATATGAATGAGAAGAAAG 59.077 37.037 10.38 0.00 41.94 2.62
823 827 7.095857 CGGAGTACATATGAATGAGAAGAAAGC 60.096 40.741 10.38 0.00 36.54 3.51
824 828 7.712639 GGAGTACATATGAATGAGAAGAAAGCA 59.287 37.037 10.38 0.00 36.54 3.91
825 829 8.430801 AGTACATATGAATGAGAAGAAAGCAC 57.569 34.615 10.38 0.00 36.54 4.40
826 830 6.355397 ACATATGAATGAGAAGAAAGCACG 57.645 37.500 10.38 0.00 36.54 5.34
827 831 5.877012 ACATATGAATGAGAAGAAAGCACGT 59.123 36.000 10.38 0.00 36.54 4.49
828 832 7.041721 ACATATGAATGAGAAGAAAGCACGTA 58.958 34.615 10.38 0.00 36.54 3.57
829 833 5.786401 ATGAATGAGAAGAAAGCACGTAC 57.214 39.130 0.00 0.00 0.00 3.67
830 834 4.883083 TGAATGAGAAGAAAGCACGTACT 58.117 39.130 0.00 0.00 0.00 2.73
831 835 4.686091 TGAATGAGAAGAAAGCACGTACTG 59.314 41.667 0.00 0.00 0.00 2.74
832 836 3.728076 TGAGAAGAAAGCACGTACTGT 57.272 42.857 0.00 0.00 0.00 3.55
833 837 4.841443 TGAGAAGAAAGCACGTACTGTA 57.159 40.909 0.00 0.00 0.00 2.74
834 838 4.795268 TGAGAAGAAAGCACGTACTGTAG 58.205 43.478 0.00 0.00 0.00 2.74
835 839 3.576648 AGAAGAAAGCACGTACTGTAGC 58.423 45.455 0.00 0.00 0.00 3.58
836 840 3.005472 AGAAGAAAGCACGTACTGTAGCA 59.995 43.478 0.00 0.00 0.00 3.49
837 841 3.380479 AGAAAGCACGTACTGTAGCAA 57.620 42.857 0.00 0.00 0.00 3.91
838 842 3.057734 AGAAAGCACGTACTGTAGCAAC 58.942 45.455 0.00 0.00 0.00 4.17
839 843 2.519377 AAGCACGTACTGTAGCAACA 57.481 45.000 0.00 0.00 0.00 3.33
840 844 2.519377 AGCACGTACTGTAGCAACAA 57.481 45.000 0.00 0.00 34.49 2.83
841 845 2.828877 AGCACGTACTGTAGCAACAAA 58.171 42.857 0.00 0.00 34.49 2.83
842 846 2.542595 AGCACGTACTGTAGCAACAAAC 59.457 45.455 0.00 0.00 34.49 2.93
843 847 2.285756 GCACGTACTGTAGCAACAAACA 59.714 45.455 0.00 0.00 34.49 2.83
844 848 3.843510 GCACGTACTGTAGCAACAAACAC 60.844 47.826 0.00 0.00 34.49 3.32
845 849 3.554324 CACGTACTGTAGCAACAAACACT 59.446 43.478 0.00 0.00 34.49 3.55
846 850 4.741185 CACGTACTGTAGCAACAAACACTA 59.259 41.667 0.00 0.00 34.49 2.74
847 851 4.980434 ACGTACTGTAGCAACAAACACTAG 59.020 41.667 0.00 0.00 34.49 2.57
848 852 4.143389 CGTACTGTAGCAACAAACACTAGC 60.143 45.833 0.00 0.00 34.49 3.42
849 853 4.073293 ACTGTAGCAACAAACACTAGCT 57.927 40.909 0.00 0.00 39.22 3.32
850 854 5.209818 ACTGTAGCAACAAACACTAGCTA 57.790 39.130 0.00 0.00 36.80 3.32
851 855 5.230942 ACTGTAGCAACAAACACTAGCTAG 58.769 41.667 19.44 19.44 38.35 3.42
852 856 5.010719 ACTGTAGCAACAAACACTAGCTAGA 59.989 40.000 27.45 0.00 38.35 2.43
929 953 2.523168 CACCCCCAACCCCAACAC 60.523 66.667 0.00 0.00 0.00 3.32
1181 1205 0.472925 TACCACCAACTCAGCCTCCA 60.473 55.000 0.00 0.00 0.00 3.86
1210 1237 1.549037 CCTATTCCTCCTCCTCCTCCG 60.549 61.905 0.00 0.00 0.00 4.63
1234 1261 4.184629 CCCTTCTTCCTCGTGATTAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
1237 1264 5.395768 CCTTCTTCCTCGTGATTAAGTGGAT 60.396 44.000 0.00 0.00 30.13 3.41
1248 1275 1.268992 TAAGTGGATGGACACCCCCG 61.269 60.000 0.00 0.00 42.28 5.73
1277 1304 0.533978 TGCCAGCGAGCAAAGTACAA 60.534 50.000 0.83 0.00 40.56 2.41
1472 1505 0.455005 AAGGTCGCTAACGCTCCTAC 59.545 55.000 3.35 0.00 40.54 3.18
1473 1506 0.394080 AGGTCGCTAACGCTCCTACT 60.394 55.000 1.39 0.00 39.98 2.57
1475 1508 0.029167 GTCGCTAACGCTCCTACTCC 59.971 60.000 0.00 0.00 39.84 3.85
1476 1509 1.099879 TCGCTAACGCTCCTACTCCC 61.100 60.000 0.00 0.00 39.84 4.30
1480 1513 2.158943 GCTAACGCTCCTACTCCCATTT 60.159 50.000 0.00 0.00 0.00 2.32
1482 1515 1.867363 ACGCTCCTACTCCCATTTCT 58.133 50.000 0.00 0.00 0.00 2.52
1497 1530 5.361285 TCCCATTTCTAGTCTTCTCTGCTAC 59.639 44.000 0.00 0.00 0.00 3.58
1527 1560 5.468540 AATCCCTAAAAACTGCACTTTCC 57.531 39.130 0.00 0.00 0.00 3.13
1528 1561 4.178956 TCCCTAAAAACTGCACTTTCCT 57.821 40.909 0.00 0.00 0.00 3.36
1529 1562 4.542697 TCCCTAAAAACTGCACTTTCCTT 58.457 39.130 0.00 0.00 0.00 3.36
1530 1563 4.340950 TCCCTAAAAACTGCACTTTCCTTG 59.659 41.667 0.00 0.00 0.00 3.61
1531 1564 4.340950 CCCTAAAAACTGCACTTTCCTTGA 59.659 41.667 0.00 0.00 0.00 3.02
1532 1565 5.011023 CCCTAAAAACTGCACTTTCCTTGAT 59.989 40.000 0.00 0.00 0.00 2.57
1533 1566 6.462909 CCCTAAAAACTGCACTTTCCTTGATT 60.463 38.462 0.00 0.00 0.00 2.57
1534 1567 6.421801 CCTAAAAACTGCACTTTCCTTGATTG 59.578 38.462 0.00 0.00 0.00 2.67
1535 1568 3.375782 AACTGCACTTTCCTTGATTGC 57.624 42.857 0.00 0.00 0.00 3.56
1536 1569 2.590821 ACTGCACTTTCCTTGATTGCT 58.409 42.857 0.00 0.00 34.18 3.91
1537 1570 3.754965 ACTGCACTTTCCTTGATTGCTA 58.245 40.909 0.00 0.00 34.18 3.49
1538 1571 4.144297 ACTGCACTTTCCTTGATTGCTAA 58.856 39.130 0.00 0.00 34.18 3.09
1539 1572 4.584325 ACTGCACTTTCCTTGATTGCTAAA 59.416 37.500 0.00 0.00 34.18 1.85
1540 1573 5.068987 ACTGCACTTTCCTTGATTGCTAAAA 59.931 36.000 0.00 0.00 34.18 1.52
1541 1574 5.911752 TGCACTTTCCTTGATTGCTAAAAA 58.088 33.333 0.00 0.00 34.18 1.94
1564 1597 7.581011 AAAAACTCGTGATTAATCCATTTGC 57.419 32.000 12.90 0.00 0.00 3.68
1565 1598 6.515272 AAACTCGTGATTAATCCATTTGCT 57.485 33.333 12.90 0.00 0.00 3.91
1566 1599 5.741388 ACTCGTGATTAATCCATTTGCTC 57.259 39.130 12.90 0.00 0.00 4.26
1567 1600 5.185454 ACTCGTGATTAATCCATTTGCTCA 58.815 37.500 12.90 0.00 0.00 4.26
1568 1601 5.647658 ACTCGTGATTAATCCATTTGCTCAA 59.352 36.000 12.90 0.00 0.00 3.02
1569 1602 6.150976 ACTCGTGATTAATCCATTTGCTCAAA 59.849 34.615 12.90 0.00 34.46 2.69
1570 1603 6.918626 TCGTGATTAATCCATTTGCTCAAAA 58.081 32.000 12.90 0.00 33.56 2.44
1571 1604 7.028962 TCGTGATTAATCCATTTGCTCAAAAG 58.971 34.615 12.90 0.00 33.56 2.27
1572 1605 6.808212 CGTGATTAATCCATTTGCTCAAAAGT 59.192 34.615 12.90 0.00 33.56 2.66
1573 1606 7.967854 CGTGATTAATCCATTTGCTCAAAAGTA 59.032 33.333 12.90 0.00 33.56 2.24
1574 1607 9.076596 GTGATTAATCCATTTGCTCAAAAGTAC 57.923 33.333 12.90 0.00 33.56 2.73
1575 1608 9.023962 TGATTAATCCATTTGCTCAAAAGTACT 57.976 29.630 12.90 0.00 33.56 2.73
1576 1609 9.508567 GATTAATCCATTTGCTCAAAAGTACTC 57.491 33.333 3.92 0.00 33.56 2.59
1577 1610 8.635765 TTAATCCATTTGCTCAAAAGTACTCT 57.364 30.769 0.00 0.00 33.56 3.24
1578 1611 9.733556 TTAATCCATTTGCTCAAAAGTACTCTA 57.266 29.630 0.00 0.00 33.56 2.43
1579 1612 8.635765 AATCCATTTGCTCAAAAGTACTCTAA 57.364 30.769 0.00 0.00 33.56 2.10
1580 1613 8.814038 ATCCATTTGCTCAAAAGTACTCTAAT 57.186 30.769 0.00 0.00 33.56 1.73
1581 1614 8.635765 TCCATTTGCTCAAAAGTACTCTAATT 57.364 30.769 0.00 0.00 33.56 1.40
1582 1615 8.514594 TCCATTTGCTCAAAAGTACTCTAATTG 58.485 33.333 0.00 0.24 33.56 2.32
1583 1616 8.514594 CCATTTGCTCAAAAGTACTCTAATTGA 58.485 33.333 0.00 4.71 33.56 2.57
1601 1634 9.693739 TCTAATTGATAATCCCTAAAAACTGCA 57.306 29.630 0.00 0.00 0.00 4.41
1602 1635 9.736023 CTAATTGATAATCCCTAAAAACTGCAC 57.264 33.333 0.00 0.00 0.00 4.57
1603 1636 7.961326 ATTGATAATCCCTAAAAACTGCACT 57.039 32.000 0.00 0.00 0.00 4.40
1604 1637 7.391148 TTGATAATCCCTAAAAACTGCACTC 57.609 36.000 0.00 0.00 0.00 3.51
1605 1638 6.721318 TGATAATCCCTAAAAACTGCACTCT 58.279 36.000 0.00 0.00 0.00 3.24
1606 1639 6.823689 TGATAATCCCTAAAAACTGCACTCTC 59.176 38.462 0.00 0.00 0.00 3.20
1607 1640 3.418684 TCCCTAAAAACTGCACTCTCC 57.581 47.619 0.00 0.00 0.00 3.71
1608 1641 2.979678 TCCCTAAAAACTGCACTCTCCT 59.020 45.455 0.00 0.00 0.00 3.69
1609 1642 3.394606 TCCCTAAAAACTGCACTCTCCTT 59.605 43.478 0.00 0.00 0.00 3.36
1610 1643 3.503748 CCCTAAAAACTGCACTCTCCTTG 59.496 47.826 0.00 0.00 0.00 3.61
1611 1644 4.389374 CCTAAAAACTGCACTCTCCTTGA 58.611 43.478 0.00 0.00 0.00 3.02
1612 1645 5.006386 CCTAAAAACTGCACTCTCCTTGAT 58.994 41.667 0.00 0.00 0.00 2.57
1613 1646 5.474876 CCTAAAAACTGCACTCTCCTTGATT 59.525 40.000 0.00 0.00 0.00 2.57
1614 1647 5.859205 AAAAACTGCACTCTCCTTGATTT 57.141 34.783 0.00 0.00 0.00 2.17
1615 1648 4.843220 AAACTGCACTCTCCTTGATTTG 57.157 40.909 0.00 0.00 0.00 2.32
1616 1649 2.157738 ACTGCACTCTCCTTGATTTGC 58.842 47.619 0.00 0.00 35.38 3.68
1617 1650 2.224719 ACTGCACTCTCCTTGATTTGCT 60.225 45.455 0.00 0.00 35.67 3.91
1618 1651 3.008375 ACTGCACTCTCCTTGATTTGCTA 59.992 43.478 0.00 0.00 35.67 3.49
1619 1652 4.005650 CTGCACTCTCCTTGATTTGCTAA 58.994 43.478 0.00 0.00 35.67 3.09
1620 1653 4.397420 TGCACTCTCCTTGATTTGCTAAA 58.603 39.130 0.00 0.00 35.67 1.85
1621 1654 4.826733 TGCACTCTCCTTGATTTGCTAAAA 59.173 37.500 0.00 0.00 35.67 1.52
1622 1655 5.301551 TGCACTCTCCTTGATTTGCTAAAAA 59.698 36.000 0.00 0.00 35.67 1.94
1644 1677 7.581011 AAAAACTCGTGATTAATCCATTTGC 57.419 32.000 12.90 0.00 0.00 3.68
1645 1678 6.515272 AAACTCGTGATTAATCCATTTGCT 57.485 33.333 12.90 0.00 0.00 3.91
1646 1679 5.741388 ACTCGTGATTAATCCATTTGCTC 57.259 39.130 12.90 0.00 0.00 4.26
1647 1680 5.185454 ACTCGTGATTAATCCATTTGCTCA 58.815 37.500 12.90 0.00 0.00 4.26
1648 1681 5.647658 ACTCGTGATTAATCCATTTGCTCAA 59.352 36.000 12.90 0.00 0.00 3.02
1649 1682 6.150976 ACTCGTGATTAATCCATTTGCTCAAA 59.849 34.615 12.90 0.00 34.46 2.69
1650 1683 6.918626 TCGTGATTAATCCATTTGCTCAAAA 58.081 32.000 12.90 0.00 33.56 2.44
1651 1684 7.374272 TCGTGATTAATCCATTTGCTCAAAAA 58.626 30.769 12.90 0.00 33.56 1.94
1652 1685 8.034215 TCGTGATTAATCCATTTGCTCAAAAAT 58.966 29.630 12.90 0.00 33.56 1.82
1653 1686 9.299963 CGTGATTAATCCATTTGCTCAAAAATA 57.700 29.630 12.90 0.00 33.56 1.40
1680 1713 9.250246 AGTAATTAATAAGCCCTAAAAACTGCA 57.750 29.630 0.00 0.00 0.00 4.41
1681 1714 9.297586 GTAATTAATAAGCCCTAAAAACTGCAC 57.702 33.333 0.00 0.00 0.00 4.57
1697 1730 4.144297 ACTGCACTTTCCTTGATTTGCTA 58.856 39.130 0.00 0.00 0.00 3.49
1775 1809 1.945387 TCATCATCCGCAGCTTCTTC 58.055 50.000 0.00 0.00 0.00 2.87
1776 1810 1.483827 TCATCATCCGCAGCTTCTTCT 59.516 47.619 0.00 0.00 0.00 2.85
1777 1811 2.695147 TCATCATCCGCAGCTTCTTCTA 59.305 45.455 0.00 0.00 0.00 2.10
1778 1812 3.132824 TCATCATCCGCAGCTTCTTCTAA 59.867 43.478 0.00 0.00 0.00 2.10
1779 1813 3.827008 TCATCCGCAGCTTCTTCTAAT 57.173 42.857 0.00 0.00 0.00 1.73
1780 1814 3.722147 TCATCCGCAGCTTCTTCTAATC 58.278 45.455 0.00 0.00 0.00 1.75
1781 1815 2.209838 TCCGCAGCTTCTTCTAATCG 57.790 50.000 0.00 0.00 0.00 3.34
1782 1816 1.749063 TCCGCAGCTTCTTCTAATCGA 59.251 47.619 0.00 0.00 0.00 3.59
1783 1817 1.855360 CCGCAGCTTCTTCTAATCGAC 59.145 52.381 0.00 0.00 0.00 4.20
1784 1818 2.480416 CCGCAGCTTCTTCTAATCGACT 60.480 50.000 0.00 0.00 0.00 4.18
1785 1819 3.243101 CCGCAGCTTCTTCTAATCGACTA 60.243 47.826 0.00 0.00 0.00 2.59
1786 1820 4.352039 CGCAGCTTCTTCTAATCGACTAA 58.648 43.478 0.00 0.00 0.00 2.24
1787 1821 4.798907 CGCAGCTTCTTCTAATCGACTAAA 59.201 41.667 0.00 0.00 0.00 1.85
1788 1822 5.288712 CGCAGCTTCTTCTAATCGACTAAAA 59.711 40.000 0.00 0.00 0.00 1.52
1789 1823 6.470999 GCAGCTTCTTCTAATCGACTAAAAC 58.529 40.000 0.00 0.00 0.00 2.43
1790 1824 6.455780 GCAGCTTCTTCTAATCGACTAAAACC 60.456 42.308 0.00 0.00 0.00 3.27
1791 1825 6.814146 CAGCTTCTTCTAATCGACTAAAACCT 59.186 38.462 0.00 0.00 0.00 3.50
1820 1854 3.763097 TTATGGCTTGCATTCTTCACG 57.237 42.857 0.00 0.00 0.00 4.35
1827 1861 2.183478 TGCATTCTTCACGGACACAT 57.817 45.000 0.00 0.00 0.00 3.21
1853 1887 5.414789 TGCACTGGTTCTAGCTTATGTAA 57.585 39.130 0.00 0.00 0.00 2.41
1854 1888 5.989477 TGCACTGGTTCTAGCTTATGTAAT 58.011 37.500 0.00 0.00 0.00 1.89
1855 1889 7.119709 TGCACTGGTTCTAGCTTATGTAATA 57.880 36.000 0.00 0.00 0.00 0.98
1856 1890 6.984474 TGCACTGGTTCTAGCTTATGTAATAC 59.016 38.462 0.00 0.00 0.00 1.89
1893 1947 3.841643 GCTGTTAGCTACCGTTAGTCAA 58.158 45.455 0.00 0.00 38.45 3.18
1924 1978 9.614792 GAGAGTTATTTATCTTTAGGCCTTCAA 57.385 33.333 12.58 3.30 0.00 2.69
1927 1981 9.975218 AGTTATTTATCTTTAGGCCTTCAAAGA 57.025 29.630 25.86 25.86 43.05 2.52
1931 1985 4.447138 TCTTTAGGCCTTCAAAGAACCA 57.553 40.909 22.94 5.83 37.72 3.67
1932 1986 4.142038 TCTTTAGGCCTTCAAAGAACCAC 58.858 43.478 22.94 0.00 37.72 4.16
1933 1987 3.876309 TTAGGCCTTCAAAGAACCACT 57.124 42.857 12.58 0.00 0.00 4.00
1934 1988 4.986054 TTAGGCCTTCAAAGAACCACTA 57.014 40.909 12.58 0.00 0.00 2.74
1936 1990 3.487372 AGGCCTTCAAAGAACCACTAAC 58.513 45.455 0.00 0.00 0.00 2.34
1937 1991 3.138468 AGGCCTTCAAAGAACCACTAACT 59.862 43.478 0.00 0.00 0.00 2.24
1984 2038 8.833231 TTCTCCTAAAGTTTCTCTACAATGTG 57.167 34.615 0.00 0.00 0.00 3.21
2097 2432 3.854784 GCACATGCACTTTCTTCACCTTC 60.855 47.826 0.00 0.00 41.59 3.46
2120 2455 9.865321 CTTCTATTTTGTTTGAATGGTCATGAT 57.135 29.630 0.00 0.00 32.48 2.45
2122 2457 9.859427 TCTATTTTGTTTGAATGGTCATGATTC 57.141 29.630 0.00 0.00 32.48 2.52
2177 2534 2.408271 TTTCGGCAAGATCATCTGCT 57.592 45.000 12.45 0.00 0.00 4.24
2294 2651 1.469767 CCTGCTATTTTCGCTTTGGCC 60.470 52.381 0.00 0.00 34.44 5.36
2295 2652 1.474077 CTGCTATTTTCGCTTTGGCCT 59.526 47.619 3.32 0.00 34.44 5.19
2353 2710 0.759346 GTAGCATCTACCCCAGGTGG 59.241 60.000 0.00 0.00 35.74 4.61
2365 2722 1.463674 CCAGGTGGTATGCAGAAACC 58.536 55.000 6.38 6.38 36.24 3.27
2449 2811 3.277962 AGCTGAATTGGCTCCCTTG 57.722 52.632 0.00 0.00 34.70 3.61
2458 2820 1.376466 GGCTCCCTTGTGAAGCAGA 59.624 57.895 0.00 0.00 0.00 4.26
2480 2842 9.360093 GCAGACATAGGTAGTTATCATTATGTC 57.640 37.037 12.23 12.23 43.61 3.06
2595 2957 1.376609 CTGGAATGGGTGTTAGCGGC 61.377 60.000 0.00 0.00 0.00 6.53
2658 3044 3.932483 GGTGGGTTCGGTGGTCGT 61.932 66.667 0.00 0.00 40.32 4.34
2659 3045 2.663852 GTGGGTTCGGTGGTCGTG 60.664 66.667 0.00 0.00 40.32 4.35
2660 3046 3.931247 TGGGTTCGGTGGTCGTGG 61.931 66.667 0.00 0.00 40.32 4.94
2668 3054 4.736896 GTGGTCGTGGCGGAGGTC 62.737 72.222 0.00 0.00 0.00 3.85
2678 3064 4.796231 CGGAGGTCGGCTCGTTGG 62.796 72.222 0.00 0.00 34.75 3.77
2679 3065 3.692406 GGAGGTCGGCTCGTTGGT 61.692 66.667 0.00 0.00 0.00 3.67
2680 3066 2.126031 GAGGTCGGCTCGTTGGTC 60.126 66.667 0.00 0.00 0.00 4.02
2681 3067 3.966026 GAGGTCGGCTCGTTGGTCG 62.966 68.421 0.00 0.00 41.41 4.79
2808 3194 4.269363 GCAATGCAAATCAGCTAAATGGAC 59.731 41.667 0.00 0.00 34.99 4.02
2809 3195 5.412640 CAATGCAAATCAGCTAAATGGACA 58.587 37.500 0.00 0.00 34.99 4.02
2839 3225 2.851824 CCTTGCGTGTGTTCTTGTTTTC 59.148 45.455 0.00 0.00 0.00 2.29
2888 3274 8.094548 CCTGACCTATATTAATTGGATGACGAA 58.905 37.037 0.00 0.00 32.84 3.85
2899 3285 7.891183 AATTGGATGACGAACTATATGCTAC 57.109 36.000 0.00 0.00 0.00 3.58
2925 3311 3.433598 GGCATGGTAGAAGGTAGCATTGA 60.434 47.826 0.00 0.00 33.89 2.57
2957 3343 1.620822 GAGGGGAGCATGTTTGTGTT 58.379 50.000 0.00 0.00 0.00 3.32
2959 3345 2.488153 GAGGGGAGCATGTTTGTGTTAC 59.512 50.000 0.00 0.00 0.00 2.50
3038 3424 4.456911 AGATGAGATTTTCTGAAGCGCAAA 59.543 37.500 11.47 0.00 0.00 3.68
3047 3433 2.357323 TCTGAAGCGCAAACACATTCAA 59.643 40.909 11.47 0.00 30.10 2.69
3051 3437 2.731217 AGCGCAAACACATTCAAGTTC 58.269 42.857 11.47 0.00 0.00 3.01
3089 3483 4.355543 TGTCTTGTTGCTTCTTGTTGTC 57.644 40.909 0.00 0.00 0.00 3.18
3149 3546 4.946160 TTGTTATTGAATCAGGGGAGGT 57.054 40.909 0.00 0.00 0.00 3.85
3245 3802 7.360575 ACAGTAAATTAACTCATTCCACGTC 57.639 36.000 0.00 0.00 0.00 4.34
3247 3804 5.878669 AGTAAATTAACTCATTCCACGTCCC 59.121 40.000 0.00 0.00 0.00 4.46
3249 3806 0.906775 TAACTCATTCCACGTCCCCC 59.093 55.000 0.00 0.00 0.00 5.40
3332 3915 6.920569 TCACTGTCATCATGAATCAATCAG 57.079 37.500 0.00 5.92 42.53 2.90
3335 3918 7.065443 TCACTGTCATCATGAATCAATCAGAAC 59.935 37.037 0.00 0.00 42.53 3.01
3366 3950 4.989875 AGAAGTTCCTATGGATGATGGG 57.010 45.455 0.00 0.00 33.84 4.00
3370 3954 3.788142 AGTTCCTATGGATGATGGGTTGT 59.212 43.478 0.00 0.00 34.23 3.32
3374 3958 2.234896 ATGGATGATGGGTTGTTGCA 57.765 45.000 0.00 0.00 0.00 4.08
3640 4236 4.057428 GCACCTCGCTCTCCACGT 62.057 66.667 0.00 0.00 37.77 4.49
3708 4304 1.209747 CCCTTGTAGCAGTAGGGGTTC 59.790 57.143 0.00 0.00 44.11 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.457598 ACGAAGGTTCTAGATCTGGCA 58.542 47.619 5.18 0.00 0.00 4.92
63 64 5.887035 ACTAGCAGTTACGAAGGTTCTAGAT 59.113 40.000 0.00 0.00 0.00 1.98
88 89 1.305201 GACCCAACAACGCTTGAAGA 58.695 50.000 0.00 0.00 0.00 2.87
151 152 4.940046 AGTTGTCGCAAAGATCATCTTGAT 59.060 37.500 0.00 0.00 40.34 2.57
152 153 4.318332 AGTTGTCGCAAAGATCATCTTGA 58.682 39.130 0.00 0.00 36.71 3.02
164 165 3.129462 TGGTTCAATTGAAGTTGTCGCAA 59.871 39.130 21.05 0.00 34.27 4.85
175 176 5.411361 CACTTACGAGGAATGGTTCAATTGA 59.589 40.000 3.38 3.38 0.00 2.57
187 188 1.542472 TGATGCGACACTTACGAGGAA 59.458 47.619 0.00 0.00 0.00 3.36
224 225 2.224992 TGGCTTGCACCCTCTGAAAATA 60.225 45.455 4.38 0.00 0.00 1.40
271 272 6.995091 GCTCCAGTTAGACCAAATCATATCTT 59.005 38.462 0.00 0.00 0.00 2.40
273 274 5.406780 CGCTCCAGTTAGACCAAATCATATC 59.593 44.000 0.00 0.00 0.00 1.63
275 276 4.404394 TCGCTCCAGTTAGACCAAATCATA 59.596 41.667 0.00 0.00 0.00 2.15
315 318 3.806949 TTAGATTGTGGACAAGCCCTT 57.193 42.857 4.20 0.00 42.73 3.95
341 344 6.990798 TGGTTTCATCAATGCATTTAAGTCA 58.009 32.000 9.83 0.00 0.00 3.41
342 345 8.385111 CAATGGTTTCATCAATGCATTTAAGTC 58.615 33.333 9.83 0.00 32.24 3.01
344 347 7.334921 ACCAATGGTTTCATCAATGCATTTAAG 59.665 33.333 9.83 0.00 27.29 1.85
345 348 7.119407 CACCAATGGTTTCATCAATGCATTTAA 59.881 33.333 9.83 1.01 31.02 1.52
353 356 3.519667 ACCCACCAATGGTTTCATCAAT 58.480 40.909 0.16 0.00 45.66 2.57
394 397 5.804771 GCAAGGAGGAAGGTTATCTTGAAGT 60.805 44.000 0.00 0.00 35.50 3.01
465 469 0.463833 AACCGAATCCGAATGAGCCC 60.464 55.000 0.00 0.00 38.22 5.19
466 470 1.064060 CAAACCGAATCCGAATGAGCC 59.936 52.381 0.00 0.00 38.22 4.70
470 474 1.670811 CCTCCAAACCGAATCCGAATG 59.329 52.381 0.00 0.00 38.22 2.67
471 475 1.408266 CCCTCCAAACCGAATCCGAAT 60.408 52.381 0.00 0.00 38.22 3.34
474 478 0.322187 AACCCTCCAAACCGAATCCG 60.322 55.000 0.00 0.00 0.00 4.18
475 479 1.919240 AAACCCTCCAAACCGAATCC 58.081 50.000 0.00 0.00 0.00 3.01
481 485 4.042271 TCCTATGAAAACCCTCCAAACC 57.958 45.455 0.00 0.00 0.00 3.27
482 486 6.413783 TTTTCCTATGAAAACCCTCCAAAC 57.586 37.500 2.19 0.00 43.68 2.93
494 498 9.527157 TCCTTGTTCATATGTTTTTCCTATGAA 57.473 29.630 1.90 0.00 39.50 2.57
498 502 8.966868 GGAATCCTTGTTCATATGTTTTTCCTA 58.033 33.333 1.90 0.00 0.00 2.94
500 504 6.751888 CGGAATCCTTGTTCATATGTTTTTCC 59.248 38.462 1.90 5.15 0.00 3.13
501 505 6.751888 CCGGAATCCTTGTTCATATGTTTTTC 59.248 38.462 0.00 0.00 0.00 2.29
502 506 6.350949 CCCGGAATCCTTGTTCATATGTTTTT 60.351 38.462 0.73 0.00 0.00 1.94
504 508 4.644685 CCCGGAATCCTTGTTCATATGTTT 59.355 41.667 0.73 0.00 0.00 2.83
506 510 3.458118 TCCCGGAATCCTTGTTCATATGT 59.542 43.478 0.73 0.00 0.00 2.29
507 511 4.085357 TCCCGGAATCCTTGTTCATATG 57.915 45.455 0.73 0.00 0.00 1.78
511 515 2.373836 TCTTTCCCGGAATCCTTGTTCA 59.626 45.455 0.73 0.00 0.00 3.18
512 516 3.067684 TCTTTCCCGGAATCCTTGTTC 57.932 47.619 0.73 0.00 0.00 3.18
513 517 3.739401 ATCTTTCCCGGAATCCTTGTT 57.261 42.857 0.73 0.00 0.00 2.83
515 519 2.952310 GGAATCTTTCCCGGAATCCTTG 59.048 50.000 0.73 0.00 44.30 3.61
516 520 3.298686 GGAATCTTTCCCGGAATCCTT 57.701 47.619 0.73 0.67 44.30 3.36
527 531 8.723942 ACCGAATGCATATATAGGAATCTTTC 57.276 34.615 0.00 0.00 0.00 2.62
528 532 9.520515 AAACCGAATGCATATATAGGAATCTTT 57.479 29.630 0.00 0.00 0.00 2.52
529 533 8.950210 CAAACCGAATGCATATATAGGAATCTT 58.050 33.333 0.00 0.00 0.00 2.40
530 534 8.103305 ACAAACCGAATGCATATATAGGAATCT 58.897 33.333 0.00 0.00 0.00 2.40
531 535 8.268850 ACAAACCGAATGCATATATAGGAATC 57.731 34.615 0.00 0.00 0.00 2.52
534 538 6.809689 CGTACAAACCGAATGCATATATAGGA 59.190 38.462 0.00 0.00 0.00 2.94
535 539 6.809689 TCGTACAAACCGAATGCATATATAGG 59.190 38.462 0.00 1.89 0.00 2.57
537 541 7.595604 TCTCGTACAAACCGAATGCATATATA 58.404 34.615 0.00 0.00 33.34 0.86
538 542 6.452242 TCTCGTACAAACCGAATGCATATAT 58.548 36.000 0.00 0.00 33.34 0.86
539 543 5.834169 TCTCGTACAAACCGAATGCATATA 58.166 37.500 0.00 0.00 33.34 0.86
540 544 4.689071 TCTCGTACAAACCGAATGCATAT 58.311 39.130 0.00 0.00 33.34 1.78
541 545 4.112716 TCTCGTACAAACCGAATGCATA 57.887 40.909 0.00 0.00 33.34 3.14
542 546 2.967362 TCTCGTACAAACCGAATGCAT 58.033 42.857 0.00 0.00 33.34 3.96
543 547 2.442212 TCTCGTACAAACCGAATGCA 57.558 45.000 0.00 0.00 33.34 3.96
544 548 2.536928 GCATCTCGTACAAACCGAATGC 60.537 50.000 0.00 0.00 39.32 3.56
547 551 1.342555 CGCATCTCGTACAAACCGAA 58.657 50.000 0.00 0.00 33.34 4.30
548 552 3.024423 CGCATCTCGTACAAACCGA 57.976 52.632 0.00 0.00 0.00 4.69
558 562 3.303495 ACGAATTTTCTGTACGCATCTCG 59.697 43.478 0.00 0.00 45.38 4.04
559 563 4.842139 ACGAATTTTCTGTACGCATCTC 57.158 40.909 0.00 0.00 0.00 2.75
560 564 4.804139 CCTACGAATTTTCTGTACGCATCT 59.196 41.667 0.00 0.00 0.00 2.90
561 565 4.802039 TCCTACGAATTTTCTGTACGCATC 59.198 41.667 0.00 0.00 0.00 3.91
563 567 4.177165 TCCTACGAATTTTCTGTACGCA 57.823 40.909 0.00 0.00 0.00 5.24
564 568 5.713822 ATTCCTACGAATTTTCTGTACGC 57.286 39.130 0.00 0.00 35.00 4.42
565 569 7.982371 AGTATTCCTACGAATTTTCTGTACG 57.018 36.000 0.00 0.00 39.49 3.67
579 583 6.183360 ACACGGGAAATGAGTAGTATTCCTAC 60.183 42.308 0.00 0.00 45.47 3.18
580 584 5.895534 ACACGGGAAATGAGTAGTATTCCTA 59.104 40.000 0.00 0.00 40.90 2.94
581 585 4.715297 ACACGGGAAATGAGTAGTATTCCT 59.285 41.667 0.00 0.00 40.90 3.36
582 586 5.019785 ACACGGGAAATGAGTAGTATTCC 57.980 43.478 0.00 0.00 40.48 3.01
583 587 6.980051 AAACACGGGAAATGAGTAGTATTC 57.020 37.500 0.00 0.00 0.00 1.75
585 589 6.938030 TCAAAAACACGGGAAATGAGTAGTAT 59.062 34.615 0.00 0.00 0.00 2.12
586 590 6.289834 TCAAAAACACGGGAAATGAGTAGTA 58.710 36.000 0.00 0.00 0.00 1.82
587 591 5.127491 TCAAAAACACGGGAAATGAGTAGT 58.873 37.500 0.00 0.00 0.00 2.73
589 593 5.009210 CCTTCAAAAACACGGGAAATGAGTA 59.991 40.000 0.00 0.00 0.00 2.59
590 594 4.202111 CCTTCAAAAACACGGGAAATGAGT 60.202 41.667 0.00 0.00 0.00 3.41
591 595 4.037446 TCCTTCAAAAACACGGGAAATGAG 59.963 41.667 0.00 0.00 0.00 2.90
592 596 3.954904 TCCTTCAAAAACACGGGAAATGA 59.045 39.130 0.00 0.00 0.00 2.57
593 597 4.314740 TCCTTCAAAAACACGGGAAATG 57.685 40.909 0.00 0.00 0.00 2.32
594 598 5.105106 AGTTTCCTTCAAAAACACGGGAAAT 60.105 36.000 0.00 0.00 42.31 2.17
595 599 4.221041 AGTTTCCTTCAAAAACACGGGAAA 59.779 37.500 0.00 0.00 38.73 3.13
596 600 3.764972 AGTTTCCTTCAAAAACACGGGAA 59.235 39.130 0.00 0.00 38.73 3.97
598 602 3.793797 AGTTTCCTTCAAAAACACGGG 57.206 42.857 2.05 0.00 38.73 5.28
599 603 5.032220 GTGTAGTTTCCTTCAAAAACACGG 58.968 41.667 2.05 0.00 38.73 4.94
600 604 5.632959 TGTGTAGTTTCCTTCAAAAACACG 58.367 37.500 0.00 0.00 41.69 4.49
601 605 6.695713 GGATGTGTAGTTTCCTTCAAAAACAC 59.304 38.462 0.00 0.00 40.45 3.32
602 606 6.378564 TGGATGTGTAGTTTCCTTCAAAAACA 59.621 34.615 2.05 0.00 38.73 2.83
604 608 6.605594 AGTGGATGTGTAGTTTCCTTCAAAAA 59.394 34.615 0.00 0.00 0.00 1.94
605 609 6.126409 AGTGGATGTGTAGTTTCCTTCAAAA 58.874 36.000 0.00 0.00 0.00 2.44
607 611 5.163248 TGAGTGGATGTGTAGTTTCCTTCAA 60.163 40.000 0.00 0.00 0.00 2.69
608 612 4.346709 TGAGTGGATGTGTAGTTTCCTTCA 59.653 41.667 0.00 0.00 0.00 3.02
609 613 4.894784 TGAGTGGATGTGTAGTTTCCTTC 58.105 43.478 0.00 0.00 0.00 3.46
610 614 4.974645 TGAGTGGATGTGTAGTTTCCTT 57.025 40.909 0.00 0.00 0.00 3.36
611 615 4.974645 TTGAGTGGATGTGTAGTTTCCT 57.025 40.909 0.00 0.00 0.00 3.36
612 616 5.940470 AGATTTGAGTGGATGTGTAGTTTCC 59.060 40.000 0.00 0.00 0.00 3.13
613 617 6.650807 TGAGATTTGAGTGGATGTGTAGTTTC 59.349 38.462 0.00 0.00 0.00 2.78
614 618 6.533730 TGAGATTTGAGTGGATGTGTAGTTT 58.466 36.000 0.00 0.00 0.00 2.66
615 619 6.114187 TGAGATTTGAGTGGATGTGTAGTT 57.886 37.500 0.00 0.00 0.00 2.24
617 621 7.621428 AAATGAGATTTGAGTGGATGTGTAG 57.379 36.000 0.00 0.00 0.00 2.74
618 622 7.575532 GCAAAATGAGATTTGAGTGGATGTGTA 60.576 37.037 4.09 0.00 41.73 2.90
619 623 6.684686 CAAAATGAGATTTGAGTGGATGTGT 58.315 36.000 0.00 0.00 41.73 3.72
620 624 5.575606 GCAAAATGAGATTTGAGTGGATGTG 59.424 40.000 4.09 0.00 41.73 3.21
621 625 5.620654 CGCAAAATGAGATTTGAGTGGATGT 60.621 40.000 4.09 0.00 41.73 3.06
622 626 4.796830 CGCAAAATGAGATTTGAGTGGATG 59.203 41.667 4.09 0.00 41.73 3.51
623 627 4.676196 GCGCAAAATGAGATTTGAGTGGAT 60.676 41.667 0.30 0.00 41.73 3.41
624 628 3.366273 GCGCAAAATGAGATTTGAGTGGA 60.366 43.478 0.30 0.00 41.73 4.02
625 629 2.919229 GCGCAAAATGAGATTTGAGTGG 59.081 45.455 0.30 0.00 41.73 4.00
626 630 2.591148 CGCGCAAAATGAGATTTGAGTG 59.409 45.455 8.75 3.73 41.73 3.51
627 631 2.226437 ACGCGCAAAATGAGATTTGAGT 59.774 40.909 5.73 0.00 41.73 3.41
628 632 2.855180 ACGCGCAAAATGAGATTTGAG 58.145 42.857 5.73 2.01 41.73 3.02
629 633 2.987413 ACGCGCAAAATGAGATTTGA 57.013 40.000 5.73 0.00 41.73 2.69
630 634 3.487536 TGTACGCGCAAAATGAGATTTG 58.512 40.909 5.73 0.00 42.01 2.32
631 635 3.822594 TGTACGCGCAAAATGAGATTT 57.177 38.095 5.73 0.00 0.00 2.17
632 636 3.822594 TTGTACGCGCAAAATGAGATT 57.177 38.095 5.73 0.00 0.00 2.40
633 637 3.488489 GTTTGTACGCGCAAAATGAGAT 58.512 40.909 5.73 0.00 39.65 2.75
634 638 2.660631 CGTTTGTACGCGCAAAATGAGA 60.661 45.455 5.73 0.00 41.41 3.27
635 639 1.637086 CGTTTGTACGCGCAAAATGAG 59.363 47.619 5.73 0.00 41.41 2.90
636 640 1.664629 CGTTTGTACGCGCAAAATGA 58.335 45.000 5.73 0.00 41.41 2.57
647 651 4.464112 GAATTGACTTGCCTCGTTTGTAC 58.536 43.478 0.00 0.00 0.00 2.90
648 652 3.500680 GGAATTGACTTGCCTCGTTTGTA 59.499 43.478 0.00 0.00 0.00 2.41
649 653 2.293399 GGAATTGACTTGCCTCGTTTGT 59.707 45.455 0.00 0.00 0.00 2.83
650 654 2.554032 AGGAATTGACTTGCCTCGTTTG 59.446 45.455 0.00 0.00 0.00 2.93
651 655 2.863809 AGGAATTGACTTGCCTCGTTT 58.136 42.857 0.00 0.00 0.00 3.60
652 656 2.568623 AGGAATTGACTTGCCTCGTT 57.431 45.000 0.00 0.00 0.00 3.85
653 657 2.568623 AAGGAATTGACTTGCCTCGT 57.431 45.000 0.00 0.00 0.00 4.18
654 658 3.861840 TCTAAGGAATTGACTTGCCTCG 58.138 45.455 2.97 0.00 0.00 4.63
655 659 5.067023 CCATTCTAAGGAATTGACTTGCCTC 59.933 44.000 2.97 0.00 39.87 4.70
656 660 4.952335 CCATTCTAAGGAATTGACTTGCCT 59.048 41.667 2.97 0.00 39.87 4.75
657 661 4.440663 GCCATTCTAAGGAATTGACTTGCC 60.441 45.833 2.97 0.00 39.87 4.52
658 662 4.158394 TGCCATTCTAAGGAATTGACTTGC 59.842 41.667 2.97 0.00 39.87 4.01
659 663 5.902613 TGCCATTCTAAGGAATTGACTTG 57.097 39.130 2.97 0.00 39.87 3.16
660 664 6.916360 TTTGCCATTCTAAGGAATTGACTT 57.084 33.333 0.00 0.00 39.87 3.01
661 665 6.438425 ACATTTGCCATTCTAAGGAATTGACT 59.562 34.615 0.00 0.00 39.87 3.41
662 666 6.633856 ACATTTGCCATTCTAAGGAATTGAC 58.366 36.000 0.00 0.00 39.87 3.18
663 667 6.436847 TGACATTTGCCATTCTAAGGAATTGA 59.563 34.615 0.00 0.00 39.87 2.57
664 668 6.632909 TGACATTTGCCATTCTAAGGAATTG 58.367 36.000 0.00 0.00 39.87 2.32
665 669 6.855763 TGACATTTGCCATTCTAAGGAATT 57.144 33.333 0.00 0.00 39.87 2.17
666 670 6.041296 GGATGACATTTGCCATTCTAAGGAAT 59.959 38.462 0.00 0.00 42.29 3.01
667 671 5.360714 GGATGACATTTGCCATTCTAAGGAA 59.639 40.000 0.00 0.00 35.78 3.36
668 672 4.889409 GGATGACATTTGCCATTCTAAGGA 59.111 41.667 0.00 0.00 0.00 3.36
669 673 4.891756 AGGATGACATTTGCCATTCTAAGG 59.108 41.667 0.00 0.00 27.25 2.69
670 674 7.446319 TGATAGGATGACATTTGCCATTCTAAG 59.554 37.037 0.00 0.00 35.26 2.18
671 675 7.289310 TGATAGGATGACATTTGCCATTCTAA 58.711 34.615 0.00 0.00 35.26 2.10
672 676 6.840527 TGATAGGATGACATTTGCCATTCTA 58.159 36.000 0.00 0.00 35.86 2.10
673 677 5.698104 TGATAGGATGACATTTGCCATTCT 58.302 37.500 0.00 0.00 33.46 2.40
674 678 6.395426 TTGATAGGATGACATTTGCCATTC 57.605 37.500 0.00 0.00 0.00 2.67
675 679 6.795144 TTTGATAGGATGACATTTGCCATT 57.205 33.333 0.00 0.00 0.00 3.16
676 680 6.989155 ATTTGATAGGATGACATTTGCCAT 57.011 33.333 0.00 0.00 0.00 4.40
677 681 6.183360 GGAATTTGATAGGATGACATTTGCCA 60.183 38.462 0.00 0.00 0.00 4.92
678 682 6.041296 AGGAATTTGATAGGATGACATTTGCC 59.959 38.462 0.00 0.00 0.00 4.52
679 683 7.047460 AGGAATTTGATAGGATGACATTTGC 57.953 36.000 0.00 0.00 0.00 3.68
694 698 9.322769 GGGATTAGGAGTAGTATAGGAATTTGA 57.677 37.037 0.00 0.00 0.00 2.69
695 699 9.327731 AGGGATTAGGAGTAGTATAGGAATTTG 57.672 37.037 0.00 0.00 0.00 2.32
697 701 9.994017 GTAGGGATTAGGAGTAGTATAGGAATT 57.006 37.037 0.00 0.00 0.00 2.17
698 702 9.136828 TGTAGGGATTAGGAGTAGTATAGGAAT 57.863 37.037 0.00 0.00 0.00 3.01
699 703 8.529952 TGTAGGGATTAGGAGTAGTATAGGAA 57.470 38.462 0.00 0.00 0.00 3.36
700 704 8.529952 TTGTAGGGATTAGGAGTAGTATAGGA 57.470 38.462 0.00 0.00 0.00 2.94
706 710 9.448587 AAATGTATTGTAGGGATTAGGAGTAGT 57.551 33.333 0.00 0.00 0.00 2.73
727 731 8.987890 CATTCGGTTTGAAGGAAATTAAAATGT 58.012 29.630 0.00 0.00 40.79 2.71
728 732 9.202273 TCATTCGGTTTGAAGGAAATTAAAATG 57.798 29.630 0.00 0.00 43.83 2.32
729 733 9.423061 CTCATTCGGTTTGAAGGAAATTAAAAT 57.577 29.630 0.00 0.00 45.83 1.82
730 734 7.383843 GCTCATTCGGTTTGAAGGAAATTAAAA 59.616 33.333 0.00 0.00 45.83 1.52
731 735 6.866248 GCTCATTCGGTTTGAAGGAAATTAAA 59.134 34.615 0.00 0.00 45.83 1.52
732 736 6.386654 GCTCATTCGGTTTGAAGGAAATTAA 58.613 36.000 0.00 0.00 45.83 1.40
733 737 5.105917 GGCTCATTCGGTTTGAAGGAAATTA 60.106 40.000 0.00 0.00 45.83 1.40
734 738 4.321974 GGCTCATTCGGTTTGAAGGAAATT 60.322 41.667 0.00 0.00 45.83 1.82
735 739 3.193479 GGCTCATTCGGTTTGAAGGAAAT 59.807 43.478 0.00 0.00 45.83 2.17
736 740 2.556622 GGCTCATTCGGTTTGAAGGAAA 59.443 45.455 0.00 0.00 45.83 3.13
737 741 2.159382 GGCTCATTCGGTTTGAAGGAA 58.841 47.619 0.00 0.00 45.83 3.36
738 742 1.613255 GGGCTCATTCGGTTTGAAGGA 60.613 52.381 0.00 0.00 44.52 3.36
739 743 0.811281 GGGCTCATTCGGTTTGAAGG 59.189 55.000 0.00 0.00 40.65 3.46
740 744 1.470098 CAGGGCTCATTCGGTTTGAAG 59.530 52.381 0.00 0.00 40.65 3.02
741 745 1.533625 CAGGGCTCATTCGGTTTGAA 58.466 50.000 0.00 0.00 41.81 2.69
742 746 0.960364 GCAGGGCTCATTCGGTTTGA 60.960 55.000 0.00 0.00 0.00 2.69
743 747 1.243342 TGCAGGGCTCATTCGGTTTG 61.243 55.000 0.00 0.00 0.00 2.93
744 748 0.323725 ATGCAGGGCTCATTCGGTTT 60.324 50.000 0.00 0.00 0.00 3.27
745 749 0.546122 TATGCAGGGCTCATTCGGTT 59.454 50.000 0.00 0.00 0.00 4.44
746 750 0.179045 GTATGCAGGGCTCATTCGGT 60.179 55.000 0.00 0.00 0.00 4.69
747 751 0.886490 GGTATGCAGGGCTCATTCGG 60.886 60.000 0.00 0.00 0.00 4.30
748 752 1.224069 CGGTATGCAGGGCTCATTCG 61.224 60.000 0.00 0.00 0.00 3.34
749 753 0.179045 ACGGTATGCAGGGCTCATTC 60.179 55.000 0.00 0.00 0.00 2.67
750 754 1.128200 TACGGTATGCAGGGCTCATT 58.872 50.000 0.00 0.00 0.00 2.57
751 755 0.393077 GTACGGTATGCAGGGCTCAT 59.607 55.000 0.00 0.00 0.00 2.90
752 756 0.686441 AGTACGGTATGCAGGGCTCA 60.686 55.000 0.00 0.00 0.00 4.26
753 757 0.464452 AAGTACGGTATGCAGGGCTC 59.536 55.000 0.00 0.00 0.00 4.70
754 758 0.178068 CAAGTACGGTATGCAGGGCT 59.822 55.000 0.00 0.00 0.00 5.19
755 759 0.177141 TCAAGTACGGTATGCAGGGC 59.823 55.000 0.00 0.00 0.00 5.19
756 760 1.480954 ACTCAAGTACGGTATGCAGGG 59.519 52.381 0.00 0.00 0.00 4.45
757 761 2.540515 CACTCAAGTACGGTATGCAGG 58.459 52.381 0.00 0.00 0.00 4.85
758 762 2.165641 TCCACTCAAGTACGGTATGCAG 59.834 50.000 0.00 0.00 0.00 4.41
759 763 2.172679 TCCACTCAAGTACGGTATGCA 58.827 47.619 0.00 0.00 0.00 3.96
760 764 2.953466 TCCACTCAAGTACGGTATGC 57.047 50.000 0.00 0.00 0.00 3.14
764 768 1.933021 TGGATCCACTCAAGTACGGT 58.067 50.000 11.44 0.00 0.00 4.83
787 791 5.875930 TCATATGTACTCCGTATATGCGTG 58.124 41.667 12.30 7.11 35.67 5.34
794 798 8.637196 TCTTCTCATTCATATGTACTCCGTAT 57.363 34.615 1.90 0.00 33.34 3.06
798 802 7.712639 TGCTTTCTTCTCATTCATATGTACTCC 59.287 37.037 1.90 0.00 33.34 3.85
799 803 8.547069 GTGCTTTCTTCTCATTCATATGTACTC 58.453 37.037 1.90 0.00 33.34 2.59
801 805 7.010552 ACGTGCTTTCTTCTCATTCATATGTAC 59.989 37.037 1.90 0.00 33.34 2.90
806 810 6.531594 CAGTACGTGCTTTCTTCTCATTCATA 59.468 38.462 2.37 0.00 0.00 2.15
808 812 4.686091 CAGTACGTGCTTTCTTCTCATTCA 59.314 41.667 2.37 0.00 0.00 2.57
809 813 4.686554 ACAGTACGTGCTTTCTTCTCATTC 59.313 41.667 2.37 0.00 0.00 2.67
811 815 4.258702 ACAGTACGTGCTTTCTTCTCAT 57.741 40.909 2.37 0.00 0.00 2.90
812 816 3.728076 ACAGTACGTGCTTTCTTCTCA 57.272 42.857 2.37 0.00 0.00 3.27
813 817 3.608939 GCTACAGTACGTGCTTTCTTCTC 59.391 47.826 2.37 0.00 0.00 2.87
817 821 3.057734 GTTGCTACAGTACGTGCTTTCT 58.942 45.455 2.37 0.00 0.00 2.52
818 822 2.798283 TGTTGCTACAGTACGTGCTTTC 59.202 45.455 2.37 0.00 0.00 2.62
819 823 2.828877 TGTTGCTACAGTACGTGCTTT 58.171 42.857 2.37 0.00 0.00 3.51
820 824 2.519377 TGTTGCTACAGTACGTGCTT 57.481 45.000 2.37 0.00 0.00 3.91
821 825 2.519377 TTGTTGCTACAGTACGTGCT 57.481 45.000 0.00 0.00 35.28 4.40
822 826 2.285756 TGTTTGTTGCTACAGTACGTGC 59.714 45.455 0.00 0.00 35.28 5.34
823 827 3.554324 AGTGTTTGTTGCTACAGTACGTG 59.446 43.478 0.00 0.00 35.28 4.49
824 828 3.788937 AGTGTTTGTTGCTACAGTACGT 58.211 40.909 0.37 0.00 35.28 3.57
825 829 4.143389 GCTAGTGTTTGTTGCTACAGTACG 60.143 45.833 0.37 0.00 35.28 3.67
826 830 4.989168 AGCTAGTGTTTGTTGCTACAGTAC 59.011 41.667 0.37 5.09 35.28 2.73
827 831 5.209818 AGCTAGTGTTTGTTGCTACAGTA 57.790 39.130 0.37 0.00 35.28 2.74
828 832 4.073293 AGCTAGTGTTTGTTGCTACAGT 57.927 40.909 0.37 0.00 35.28 3.55
829 833 5.346281 GTCTAGCTAGTGTTTGTTGCTACAG 59.654 44.000 20.10 0.00 35.28 2.74
830 834 5.010719 AGTCTAGCTAGTGTTTGTTGCTACA 59.989 40.000 20.10 0.00 35.47 2.74
831 835 5.346281 CAGTCTAGCTAGTGTTTGTTGCTAC 59.654 44.000 20.10 6.67 35.47 3.58
832 836 5.243060 TCAGTCTAGCTAGTGTTTGTTGCTA 59.757 40.000 20.10 0.00 35.47 3.49
833 837 4.039245 TCAGTCTAGCTAGTGTTTGTTGCT 59.961 41.667 20.10 0.00 37.72 3.91
834 838 4.307432 TCAGTCTAGCTAGTGTTTGTTGC 58.693 43.478 20.10 1.92 0.00 4.17
835 839 5.753438 TGTTCAGTCTAGCTAGTGTTTGTTG 59.247 40.000 20.10 9.28 0.00 3.33
836 840 5.914033 TGTTCAGTCTAGCTAGTGTTTGTT 58.086 37.500 20.10 0.00 0.00 2.83
837 841 5.531122 TGTTCAGTCTAGCTAGTGTTTGT 57.469 39.130 20.10 0.00 0.00 2.83
838 842 6.183360 CGATTGTTCAGTCTAGCTAGTGTTTG 60.183 42.308 20.10 13.49 0.00 2.93
839 843 5.864474 CGATTGTTCAGTCTAGCTAGTGTTT 59.136 40.000 20.10 2.39 0.00 2.83
840 844 5.403246 CGATTGTTCAGTCTAGCTAGTGTT 58.597 41.667 20.10 4.79 0.00 3.32
841 845 4.142359 CCGATTGTTCAGTCTAGCTAGTGT 60.142 45.833 20.10 6.24 0.00 3.55
842 846 4.355437 CCGATTGTTCAGTCTAGCTAGTG 58.645 47.826 20.10 12.29 0.00 2.74
843 847 3.181485 GCCGATTGTTCAGTCTAGCTAGT 60.181 47.826 20.10 0.00 0.00 2.57
844 848 3.376540 GCCGATTGTTCAGTCTAGCTAG 58.623 50.000 15.01 15.01 0.00 3.42
845 849 2.100916 GGCCGATTGTTCAGTCTAGCTA 59.899 50.000 0.00 0.00 0.00 3.32
846 850 1.134670 GGCCGATTGTTCAGTCTAGCT 60.135 52.381 0.00 0.00 0.00 3.32
847 851 1.291132 GGCCGATTGTTCAGTCTAGC 58.709 55.000 0.00 0.00 0.00 3.42
848 852 1.207089 TGGGCCGATTGTTCAGTCTAG 59.793 52.381 0.00 0.00 0.00 2.43
849 853 1.271856 TGGGCCGATTGTTCAGTCTA 58.728 50.000 0.00 0.00 0.00 2.59
850 854 0.400213 TTGGGCCGATTGTTCAGTCT 59.600 50.000 0.00 0.00 0.00 3.24
851 855 0.521735 GTTGGGCCGATTGTTCAGTC 59.478 55.000 0.00 0.00 0.00 3.51
852 856 0.893727 GGTTGGGCCGATTGTTCAGT 60.894 55.000 0.00 0.00 0.00 3.41
929 953 2.360726 GCGGTTGGGTACTTGGGG 60.361 66.667 0.00 0.00 0.00 4.96
1154 1178 4.382320 GTTGGTGGTAGGGCGCGA 62.382 66.667 12.10 0.00 0.00 5.87
1181 1205 0.548510 GGAGGAATAGGCCTGTTGCT 59.451 55.000 31.64 31.64 38.73 3.91
1190 1214 1.549037 CGGAGGAGGAGGAGGAATAGG 60.549 61.905 0.00 0.00 0.00 2.57
1210 1237 0.253327 AATCACGAGGAAGAAGGGGC 59.747 55.000 0.00 0.00 0.00 5.80
1472 1505 4.405358 AGCAGAGAAGACTAGAAATGGGAG 59.595 45.833 0.00 0.00 0.00 4.30
1473 1506 4.357325 AGCAGAGAAGACTAGAAATGGGA 58.643 43.478 0.00 0.00 0.00 4.37
1475 1508 6.214191 TGTAGCAGAGAAGACTAGAAATGG 57.786 41.667 0.00 0.00 0.00 3.16
1476 1509 8.715191 AATTGTAGCAGAGAAGACTAGAAATG 57.285 34.615 0.00 0.00 0.00 2.32
1540 1573 7.378181 AGCAAATGGATTAATCACGAGTTTTT 58.622 30.769 17.07 3.55 0.00 1.94
1541 1574 6.924111 AGCAAATGGATTAATCACGAGTTTT 58.076 32.000 17.07 4.74 0.00 2.43
1542 1575 6.150976 TGAGCAAATGGATTAATCACGAGTTT 59.849 34.615 17.07 7.20 0.00 2.66
1543 1576 5.647658 TGAGCAAATGGATTAATCACGAGTT 59.352 36.000 17.07 3.49 0.00 3.01
1544 1577 5.185454 TGAGCAAATGGATTAATCACGAGT 58.815 37.500 17.07 0.00 0.00 4.18
1545 1578 5.739752 TGAGCAAATGGATTAATCACGAG 57.260 39.130 17.07 4.20 0.00 4.18
1546 1579 6.507958 TTTGAGCAAATGGATTAATCACGA 57.492 33.333 17.07 1.03 0.00 4.35
1547 1580 6.808212 ACTTTTGAGCAAATGGATTAATCACG 59.192 34.615 17.07 1.86 31.92 4.35
1548 1581 9.076596 GTACTTTTGAGCAAATGGATTAATCAC 57.923 33.333 17.07 7.28 31.92 3.06
1549 1582 9.023962 AGTACTTTTGAGCAAATGGATTAATCA 57.976 29.630 17.07 4.18 31.92 2.57
1550 1583 9.508567 GAGTACTTTTGAGCAAATGGATTAATC 57.491 33.333 6.93 6.93 31.92 1.75
1551 1584 9.247861 AGAGTACTTTTGAGCAAATGGATTAAT 57.752 29.630 0.00 0.00 31.92 1.40
1552 1585 8.635765 AGAGTACTTTTGAGCAAATGGATTAA 57.364 30.769 0.00 0.00 31.92 1.40
1553 1586 9.733556 TTAGAGTACTTTTGAGCAAATGGATTA 57.266 29.630 0.00 0.00 31.92 1.75
1554 1587 8.635765 TTAGAGTACTTTTGAGCAAATGGATT 57.364 30.769 0.00 2.38 31.92 3.01
1555 1588 8.814038 ATTAGAGTACTTTTGAGCAAATGGAT 57.186 30.769 0.00 0.41 31.92 3.41
1556 1589 8.514594 CAATTAGAGTACTTTTGAGCAAATGGA 58.485 33.333 0.00 2.60 31.92 3.41
1557 1590 8.514594 TCAATTAGAGTACTTTTGAGCAAATGG 58.485 33.333 0.00 4.96 31.92 3.16
1575 1608 9.693739 TGCAGTTTTTAGGGATTATCAATTAGA 57.306 29.630 0.00 0.00 0.00 2.10
1576 1609 9.736023 GTGCAGTTTTTAGGGATTATCAATTAG 57.264 33.333 0.00 0.00 0.00 1.73
1577 1610 9.474313 AGTGCAGTTTTTAGGGATTATCAATTA 57.526 29.630 0.00 0.00 0.00 1.40
1578 1611 8.366359 AGTGCAGTTTTTAGGGATTATCAATT 57.634 30.769 0.00 0.00 0.00 2.32
1579 1612 7.836183 AGAGTGCAGTTTTTAGGGATTATCAAT 59.164 33.333 0.00 0.00 0.00 2.57
1580 1613 7.175104 AGAGTGCAGTTTTTAGGGATTATCAA 58.825 34.615 0.00 0.00 0.00 2.57
1581 1614 6.721318 AGAGTGCAGTTTTTAGGGATTATCA 58.279 36.000 0.00 0.00 0.00 2.15
1582 1615 6.261158 GGAGAGTGCAGTTTTTAGGGATTATC 59.739 42.308 0.00 0.00 0.00 1.75
1583 1616 6.069381 AGGAGAGTGCAGTTTTTAGGGATTAT 60.069 38.462 0.00 0.00 0.00 1.28
1584 1617 5.250774 AGGAGAGTGCAGTTTTTAGGGATTA 59.749 40.000 0.00 0.00 0.00 1.75
1585 1618 4.043435 AGGAGAGTGCAGTTTTTAGGGATT 59.957 41.667 0.00 0.00 0.00 3.01
1586 1619 3.589288 AGGAGAGTGCAGTTTTTAGGGAT 59.411 43.478 0.00 0.00 0.00 3.85
1587 1620 2.979678 AGGAGAGTGCAGTTTTTAGGGA 59.020 45.455 0.00 0.00 0.00 4.20
1588 1621 3.425162 AGGAGAGTGCAGTTTTTAGGG 57.575 47.619 0.00 0.00 0.00 3.53
1589 1622 4.389374 TCAAGGAGAGTGCAGTTTTTAGG 58.611 43.478 0.00 0.00 0.00 2.69
1590 1623 6.566197 AATCAAGGAGAGTGCAGTTTTTAG 57.434 37.500 0.00 0.00 0.00 1.85
1591 1624 6.735694 GCAAATCAAGGAGAGTGCAGTTTTTA 60.736 38.462 0.00 0.00 39.68 1.52
1592 1625 5.594926 CAAATCAAGGAGAGTGCAGTTTTT 58.405 37.500 0.00 0.00 0.00 1.94
1593 1626 4.500375 GCAAATCAAGGAGAGTGCAGTTTT 60.500 41.667 0.00 0.00 39.68 2.43
1594 1627 3.005155 GCAAATCAAGGAGAGTGCAGTTT 59.995 43.478 0.00 0.00 39.68 2.66
1595 1628 2.555757 GCAAATCAAGGAGAGTGCAGTT 59.444 45.455 0.00 0.00 39.68 3.16
1596 1629 2.157738 GCAAATCAAGGAGAGTGCAGT 58.842 47.619 0.00 0.00 39.68 4.40
1597 1630 2.434428 AGCAAATCAAGGAGAGTGCAG 58.566 47.619 0.00 0.00 41.39 4.41
1598 1631 2.574006 AGCAAATCAAGGAGAGTGCA 57.426 45.000 0.00 0.00 41.39 4.57
1599 1632 5.376854 TTTTAGCAAATCAAGGAGAGTGC 57.623 39.130 0.00 0.00 40.02 4.40
1620 1653 7.378181 AGCAAATGGATTAATCACGAGTTTTT 58.622 30.769 17.07 3.55 0.00 1.94
1621 1654 6.924111 AGCAAATGGATTAATCACGAGTTTT 58.076 32.000 17.07 4.74 0.00 2.43
1622 1655 6.150976 TGAGCAAATGGATTAATCACGAGTTT 59.849 34.615 17.07 7.20 0.00 2.66
1623 1656 5.647658 TGAGCAAATGGATTAATCACGAGTT 59.352 36.000 17.07 3.49 0.00 3.01
1624 1657 5.185454 TGAGCAAATGGATTAATCACGAGT 58.815 37.500 17.07 0.00 0.00 4.18
1625 1658 5.739752 TGAGCAAATGGATTAATCACGAG 57.260 39.130 17.07 4.20 0.00 4.18
1626 1659 6.507958 TTTGAGCAAATGGATTAATCACGA 57.492 33.333 17.07 1.03 0.00 4.35
1627 1660 7.579589 TTTTTGAGCAAATGGATTAATCACG 57.420 32.000 17.07 1.86 0.00 4.35
1654 1687 9.250246 TGCAGTTTTTAGGGCTTATTAATTACT 57.750 29.630 0.00 0.00 0.00 2.24
1655 1688 9.297586 GTGCAGTTTTTAGGGCTTATTAATTAC 57.702 33.333 0.00 0.00 0.00 1.89
1656 1689 9.250246 AGTGCAGTTTTTAGGGCTTATTAATTA 57.750 29.630 0.00 0.00 0.00 1.40
1657 1690 8.134202 AGTGCAGTTTTTAGGGCTTATTAATT 57.866 30.769 0.00 0.00 0.00 1.40
1658 1691 7.718334 AGTGCAGTTTTTAGGGCTTATTAAT 57.282 32.000 0.00 0.00 0.00 1.40
1659 1692 7.533289 AAGTGCAGTTTTTAGGGCTTATTAA 57.467 32.000 0.00 0.00 0.00 1.40
1660 1693 7.309560 GGAAAGTGCAGTTTTTAGGGCTTATTA 60.310 37.037 20.15 0.00 0.00 0.98
1661 1694 6.419484 AAAGTGCAGTTTTTAGGGCTTATT 57.581 33.333 13.86 0.00 0.00 1.40
1662 1695 5.047306 GGAAAGTGCAGTTTTTAGGGCTTAT 60.047 40.000 20.15 0.00 0.00 1.73
1663 1696 4.279922 GGAAAGTGCAGTTTTTAGGGCTTA 59.720 41.667 20.15 0.00 0.00 3.09
1664 1697 3.069586 GGAAAGTGCAGTTTTTAGGGCTT 59.930 43.478 20.15 0.00 0.00 4.35
1665 1698 2.628178 GGAAAGTGCAGTTTTTAGGGCT 59.372 45.455 20.15 0.00 0.00 5.19
1666 1699 2.628178 AGGAAAGTGCAGTTTTTAGGGC 59.372 45.455 20.15 6.76 0.00 5.19
1667 1700 4.340950 TCAAGGAAAGTGCAGTTTTTAGGG 59.659 41.667 20.15 9.83 0.00 3.53
1668 1701 5.514274 TCAAGGAAAGTGCAGTTTTTAGG 57.486 39.130 20.15 11.07 0.00 2.69
1669 1702 7.517259 GCAAATCAAGGAAAGTGCAGTTTTTAG 60.517 37.037 20.15 11.05 32.29 1.85
1670 1703 6.257630 GCAAATCAAGGAAAGTGCAGTTTTTA 59.742 34.615 20.15 5.74 32.29 1.52
1671 1704 5.065090 GCAAATCAAGGAAAGTGCAGTTTTT 59.935 36.000 20.15 9.28 32.29 1.94
1672 1705 4.571984 GCAAATCAAGGAAAGTGCAGTTTT 59.428 37.500 20.15 8.33 32.29 2.43
1673 1706 4.122046 GCAAATCAAGGAAAGTGCAGTTT 58.878 39.130 19.34 19.34 32.29 2.66
1674 1707 3.385755 AGCAAATCAAGGAAAGTGCAGTT 59.614 39.130 0.00 0.00 34.44 3.16
1675 1708 2.961062 AGCAAATCAAGGAAAGTGCAGT 59.039 40.909 0.00 0.00 34.44 4.40
1676 1709 3.655276 AGCAAATCAAGGAAAGTGCAG 57.345 42.857 0.00 0.00 34.44 4.41
1677 1710 4.158394 GGATAGCAAATCAAGGAAAGTGCA 59.842 41.667 0.00 0.00 34.44 4.57
1678 1711 4.440663 GGGATAGCAAATCAAGGAAAGTGC 60.441 45.833 2.01 0.00 0.00 4.40
1679 1712 4.952335 AGGGATAGCAAATCAAGGAAAGTG 59.048 41.667 2.01 0.00 0.00 3.16
1680 1713 5.198602 AGGGATAGCAAATCAAGGAAAGT 57.801 39.130 2.01 0.00 0.00 2.66
1681 1714 6.603201 TGTTAGGGATAGCAAATCAAGGAAAG 59.397 38.462 2.01 0.00 0.00 2.62
1697 1730 4.116113 TGTATGGGGAGTTTGTTAGGGAT 58.884 43.478 0.00 0.00 0.00 3.85
1799 1833 3.119531 CCGTGAAGAATGCAAGCCATAAA 60.120 43.478 0.00 0.00 32.67 1.40
1801 1835 2.016318 CCGTGAAGAATGCAAGCCATA 58.984 47.619 0.00 0.00 32.67 2.74
1820 1854 1.538047 ACCAGTGCATGAATGTGTCC 58.462 50.000 0.00 0.00 0.00 4.02
1827 1861 3.423539 AAGCTAGAACCAGTGCATGAA 57.576 42.857 0.00 0.00 0.00 2.57
1854 1888 8.665685 GCTAACAGCTAAAGCAAATTTCTAGTA 58.334 33.333 4.54 0.00 45.16 1.82
1855 1889 7.530863 GCTAACAGCTAAAGCAAATTTCTAGT 58.469 34.615 4.54 0.00 45.16 2.57
1856 1890 7.961325 GCTAACAGCTAAAGCAAATTTCTAG 57.039 36.000 4.54 0.00 45.16 2.43
1888 1942 9.678260 AAAGATAAATAACTCTCAGCATTGACT 57.322 29.630 0.00 0.00 0.00 3.41
1893 1947 7.663493 GGCCTAAAGATAAATAACTCTCAGCAT 59.337 37.037 0.00 0.00 0.00 3.79
1924 1978 6.487299 ACAGAGAGAAAGTTAGTGGTTCTT 57.513 37.500 0.00 0.00 31.80 2.52
1927 1981 7.599245 CGATAAACAGAGAGAAAGTTAGTGGTT 59.401 37.037 0.00 0.00 0.00 3.67
1929 1983 7.091443 ACGATAAACAGAGAGAAAGTTAGTGG 58.909 38.462 0.00 0.00 0.00 4.00
1931 1985 8.113173 AGACGATAAACAGAGAGAAAGTTAGT 57.887 34.615 0.00 0.00 0.00 2.24
1932 1986 7.698970 GGAGACGATAAACAGAGAGAAAGTTAG 59.301 40.741 0.00 0.00 0.00 2.34
1933 1987 7.393796 AGGAGACGATAAACAGAGAGAAAGTTA 59.606 37.037 0.00 0.00 0.00 2.24
1934 1988 6.209788 AGGAGACGATAAACAGAGAGAAAGTT 59.790 38.462 0.00 0.00 0.00 2.66
1936 1990 6.202516 AGGAGACGATAAACAGAGAGAAAG 57.797 41.667 0.00 0.00 0.00 2.62
1937 1991 6.434652 AGAAGGAGACGATAAACAGAGAGAAA 59.565 38.462 0.00 0.00 0.00 2.52
1984 2038 3.565902 AGTTCCTGAGCAAAGTAAACAGC 59.434 43.478 0.00 0.00 0.00 4.40
2097 2432 9.642327 TGAATCATGACCATTCAAACAAAATAG 57.358 29.630 7.59 0.00 37.33 1.73
2120 2455 4.673328 TCCCTGGAAAAATGGAGATGAA 57.327 40.909 0.00 0.00 0.00 2.57
2121 2456 4.044571 AGTTCCCTGGAAAAATGGAGATGA 59.955 41.667 0.00 0.00 35.75 2.92
2122 2457 4.159135 CAGTTCCCTGGAAAAATGGAGATG 59.841 45.833 0.00 0.00 35.75 2.90
2177 2534 5.977489 TGTACTTCTTAAGAGCAGCTACA 57.023 39.130 5.12 9.40 0.00 2.74
2294 2651 0.250295 TGAAGTTTCCAGGCGGTGAG 60.250 55.000 0.00 0.00 0.00 3.51
2295 2652 0.250295 CTGAAGTTTCCAGGCGGTGA 60.250 55.000 0.00 0.00 0.00 4.02
2365 2722 9.559732 TGATGTTGAGGTCCTACAATATAAATG 57.440 33.333 10.91 0.00 34.42 2.32
2418 2780 5.713861 GCCAATTCAGCTCCCATCTATATTT 59.286 40.000 0.00 0.00 0.00 1.40
2421 2783 3.912528 AGCCAATTCAGCTCCCATCTATA 59.087 43.478 0.00 0.00 34.91 1.31
2449 2811 6.806751 TGATAACTACCTATGTCTGCTTCAC 58.193 40.000 0.00 0.00 0.00 3.18
2661 3047 4.796231 CCAACGAGCCGACCTCCG 62.796 72.222 1.50 0.00 37.27 4.63
2662 3048 3.644399 GACCAACGAGCCGACCTCC 62.644 68.421 1.50 0.00 37.27 4.30
2663 3049 2.126031 GACCAACGAGCCGACCTC 60.126 66.667 1.50 0.00 37.22 3.85
2664 3050 4.052229 CGACCAACGAGCCGACCT 62.052 66.667 1.50 0.00 45.77 3.85
2665 3051 4.353437 ACGACCAACGAGCCGACC 62.353 66.667 1.50 0.00 45.77 4.79
2666 3052 3.103911 CACGACCAACGAGCCGAC 61.104 66.667 1.50 0.00 45.77 4.79
2667 3053 4.351938 CCACGACCAACGAGCCGA 62.352 66.667 1.50 0.00 45.77 5.54
2671 3057 4.351938 TCGGCCACGACCAACGAG 62.352 66.667 2.24 0.00 45.59 4.18
2672 3058 4.351938 CTCGGCCACGACCAACGA 62.352 66.667 2.24 0.00 45.59 3.85
2723 3109 2.031120 CAGAAAGTTCCAGGTTGCCAA 58.969 47.619 0.00 0.00 0.00 4.52
2899 3285 2.743183 GCTACCTTCTACCATGCCAGTG 60.743 54.545 0.00 0.00 0.00 3.66
2925 3311 2.357569 GCTCCCCTCCATTTTCATCACT 60.358 50.000 0.00 0.00 0.00 3.41
2957 3343 1.271856 TGAAGGAATGGCACCTCGTA 58.728 50.000 0.00 0.00 36.67 3.43
2959 3345 1.755179 AATGAAGGAATGGCACCTCG 58.245 50.000 0.00 0.00 36.67 4.63
3038 3424 3.181476 GCCAAACAGGAACTTGAATGTGT 60.181 43.478 0.00 0.00 41.22 3.72
3047 3433 2.159179 AAACCAGCCAAACAGGAACT 57.841 45.000 0.00 0.00 41.22 3.01
3051 3437 3.157087 AGACATAAACCAGCCAAACAGG 58.843 45.455 0.00 0.00 41.84 4.00
3089 3483 2.333926 CAACATGCCACAAATCAGCTG 58.666 47.619 7.63 7.63 0.00 4.24
3149 3546 2.642311 TGGAGATCACCAAAGGCTACAA 59.358 45.455 9.69 0.00 36.96 2.41
3194 3670 1.303561 TTTCTCAGCATTGCGCCCT 60.304 52.632 4.18 0.00 44.04 5.19
3195 3671 1.153958 GTTTCTCAGCATTGCGCCC 60.154 57.895 4.18 0.00 44.04 6.13
3196 3672 1.063174 CTAGTTTCTCAGCATTGCGCC 59.937 52.381 4.18 0.00 44.04 6.53
3197 3673 2.002586 TCTAGTTTCTCAGCATTGCGC 58.997 47.619 0.00 0.00 42.91 6.09
3198 3674 3.257393 ACTCTAGTTTCTCAGCATTGCG 58.743 45.455 2.38 0.00 0.00 4.85
3247 3804 4.519730 GCTACTACACTCTAGTACATGGGG 59.480 50.000 0.00 0.00 0.00 4.96
3249 3806 4.519730 GGGCTACTACACTCTAGTACATGG 59.480 50.000 0.00 0.00 0.00 3.66
3291 3848 8.892723 TGACAGTGATCCATGAACATTAATTAC 58.107 33.333 0.00 0.00 0.00 1.89
3332 3915 7.803659 CCATAGGAACTTCTTTTCTTTTCGTTC 59.196 37.037 0.00 0.00 41.75 3.95
3335 3918 7.435068 TCCATAGGAACTTCTTTTCTTTTCG 57.565 36.000 0.00 0.00 41.75 3.46
3370 3954 2.661537 CTGACGCCTCGTGTGCAA 60.662 61.111 0.00 0.00 41.37 4.08
3374 3958 3.251318 GACGACTGACGCCTCGTGT 62.251 63.158 0.00 0.00 43.06 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.