Multiple sequence alignment - TraesCS4B01G138100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G138100 | chr4B | 100.000 | 6785 | 0 | 0 | 1 | 6785 | 182234039 | 182240823 | 0.000000e+00 | 12530.0 |
1 | TraesCS4B01G138100 | chr4B | 94.590 | 1830 | 73 | 11 | 3123 | 4926 | 471720625 | 471722454 | 0.000000e+00 | 2808.0 |
2 | TraesCS4B01G138100 | chr4B | 94.956 | 1586 | 48 | 9 | 3123 | 4676 | 517960637 | 517962222 | 0.000000e+00 | 2457.0 |
3 | TraesCS4B01G138100 | chr4B | 94.957 | 1170 | 42 | 6 | 3773 | 4928 | 408981222 | 408982388 | 0.000000e+00 | 1818.0 |
4 | TraesCS4B01G138100 | chr4B | 92.136 | 1208 | 65 | 15 | 3747 | 4927 | 103797837 | 103796633 | 0.000000e+00 | 1677.0 |
5 | TraesCS4B01G138100 | chr4B | 93.912 | 1002 | 51 | 6 | 3123 | 4115 | 73279972 | 73278972 | 0.000000e+00 | 1504.0 |
6 | TraesCS4B01G138100 | chr4B | 99.448 | 181 | 1 | 0 | 2201 | 2381 | 455621452 | 455621632 | 5.070000e-86 | 329.0 |
7 | TraesCS4B01G138100 | chr4A | 93.747 | 2239 | 83 | 17 | 1 | 2198 | 450336050 | 450338272 | 0.000000e+00 | 3306.0 |
8 | TraesCS4B01G138100 | chr4A | 92.668 | 1173 | 68 | 13 | 3747 | 4905 | 661535122 | 661533954 | 0.000000e+00 | 1674.0 |
9 | TraesCS4B01G138100 | chr4A | 90.633 | 1121 | 48 | 23 | 5128 | 6201 | 450339251 | 450340361 | 0.000000e+00 | 1435.0 |
10 | TraesCS4B01G138100 | chr4A | 91.984 | 998 | 73 | 5 | 3122 | 4115 | 587314264 | 587313270 | 0.000000e+00 | 1393.0 |
11 | TraesCS4B01G138100 | chr4A | 95.699 | 744 | 29 | 2 | 2377 | 3120 | 450338254 | 450338994 | 0.000000e+00 | 1194.0 |
12 | TraesCS4B01G138100 | chr4A | 97.260 | 219 | 5 | 1 | 4922 | 5140 | 450338987 | 450339204 | 2.990000e-98 | 370.0 |
13 | TraesCS4B01G138100 | chr4A | 99.448 | 181 | 1 | 0 | 2201 | 2381 | 31621072 | 31621252 | 5.070000e-86 | 329.0 |
14 | TraesCS4B01G138100 | chr4A | 99.448 | 181 | 1 | 0 | 2201 | 2381 | 389235442 | 389235262 | 5.070000e-86 | 329.0 |
15 | TraesCS4B01G138100 | chr4A | 82.991 | 341 | 28 | 11 | 6332 | 6647 | 450340795 | 450341130 | 1.440000e-71 | 281.0 |
16 | TraesCS4B01G138100 | chr4A | 88.360 | 189 | 15 | 5 | 6192 | 6378 | 450340611 | 450340794 | 3.190000e-53 | 220.0 |
17 | TraesCS4B01G138100 | chr4A | 92.661 | 109 | 7 | 1 | 6641 | 6749 | 714751075 | 714750968 | 9.110000e-34 | 156.0 |
18 | TraesCS4B01G138100 | chr4A | 100.000 | 28 | 0 | 0 | 4989 | 5016 | 3148318 | 3148291 | 1.200000e-02 | 52.8 |
19 | TraesCS4B01G138100 | chr4D | 95.914 | 2056 | 55 | 11 | 161 | 2198 | 119744916 | 119746960 | 0.000000e+00 | 3304.0 |
20 | TraesCS4B01G138100 | chr4D | 90.365 | 1287 | 76 | 24 | 5128 | 6380 | 119747939 | 119749211 | 0.000000e+00 | 1646.0 |
21 | TraesCS4B01G138100 | chr4D | 97.043 | 744 | 19 | 2 | 2377 | 3120 | 119746942 | 119747682 | 0.000000e+00 | 1249.0 |
22 | TraesCS4B01G138100 | chr4D | 96.804 | 219 | 6 | 1 | 4922 | 5140 | 119747675 | 119747892 | 1.390000e-96 | 364.0 |
23 | TraesCS4B01G138100 | chr4D | 99.451 | 182 | 1 | 0 | 2201 | 2382 | 405455126 | 405455307 | 1.410000e-86 | 331.0 |
24 | TraesCS4B01G138100 | chr4D | 99.448 | 181 | 1 | 0 | 2201 | 2381 | 478512189 | 478512369 | 5.070000e-86 | 329.0 |
25 | TraesCS4B01G138100 | chr4D | 99.425 | 174 | 1 | 0 | 2207 | 2380 | 417644511 | 417644684 | 3.950000e-82 | 316.0 |
26 | TraesCS4B01G138100 | chr4D | 98.324 | 179 | 3 | 0 | 2201 | 2379 | 254241203 | 254241381 | 1.420000e-81 | 315.0 |
27 | TraesCS4B01G138100 | chr4D | 97.778 | 180 | 4 | 0 | 2201 | 2380 | 331632563 | 331632384 | 1.840000e-80 | 311.0 |
28 | TraesCS4B01G138100 | chr4D | 85.052 | 194 | 18 | 4 | 6333 | 6521 | 119749211 | 119749398 | 3.230000e-43 | 187.0 |
29 | TraesCS4B01G138100 | chr4D | 90.991 | 111 | 10 | 0 | 6641 | 6751 | 481177555 | 481177445 | 4.240000e-32 | 150.0 |
30 | TraesCS4B01G138100 | chr4D | 74.494 | 247 | 44 | 13 | 6319 | 6555 | 43054306 | 43054543 | 9.370000e-14 | 89.8 |
31 | TraesCS4B01G138100 | chr6B | 93.979 | 1827 | 61 | 21 | 3123 | 4926 | 502312717 | 502314517 | 0.000000e+00 | 2719.0 |
32 | TraesCS4B01G138100 | chr6B | 91.492 | 1810 | 100 | 30 | 3123 | 4899 | 529755566 | 529753778 | 0.000000e+00 | 2440.0 |
33 | TraesCS4B01G138100 | chr6B | 92.857 | 112 | 8 | 0 | 6644 | 6755 | 333551441 | 333551552 | 5.440000e-36 | 163.0 |
34 | TraesCS4B01G138100 | chr6B | 96.875 | 32 | 1 | 0 | 4988 | 5019 | 71867112 | 71867081 | 3.000000e-03 | 54.7 |
35 | TraesCS4B01G138100 | chr1B | 93.188 | 1835 | 61 | 20 | 3123 | 4905 | 313094430 | 313096252 | 0.000000e+00 | 2638.0 |
36 | TraesCS4B01G138100 | chr1B | 93.322 | 1198 | 50 | 19 | 3747 | 4929 | 321881179 | 321879997 | 0.000000e+00 | 1742.0 |
37 | TraesCS4B01G138100 | chr1B | 90.688 | 988 | 65 | 8 | 3123 | 4106 | 392533677 | 392532713 | 0.000000e+00 | 1290.0 |
38 | TraesCS4B01G138100 | chr1B | 91.254 | 949 | 73 | 8 | 3167 | 4106 | 312927494 | 312926547 | 0.000000e+00 | 1284.0 |
39 | TraesCS4B01G138100 | chr1B | 93.555 | 512 | 24 | 7 | 3122 | 3624 | 570749960 | 570749449 | 0.000000e+00 | 754.0 |
40 | TraesCS4B01G138100 | chr1B | 93.124 | 509 | 26 | 7 | 3125 | 3624 | 570751492 | 570750984 | 0.000000e+00 | 737.0 |
41 | TraesCS4B01G138100 | chr1B | 99.444 | 180 | 1 | 0 | 2201 | 2380 | 33923066 | 33923245 | 1.820000e-85 | 327.0 |
42 | TraesCS4B01G138100 | chr1B | 98.907 | 183 | 2 | 0 | 2201 | 2383 | 230141389 | 230141571 | 1.820000e-85 | 327.0 |
43 | TraesCS4B01G138100 | chr1B | 92.857 | 112 | 7 | 1 | 6640 | 6751 | 661509423 | 661509313 | 1.960000e-35 | 161.0 |
44 | TraesCS4B01G138100 | chr1B | 80.000 | 100 | 11 | 5 | 6446 | 6540 | 302014629 | 302014724 | 1.580000e-06 | 65.8 |
45 | TraesCS4B01G138100 | chr2B | 92.666 | 1827 | 87 | 16 | 3123 | 4926 | 45581796 | 45579994 | 0.000000e+00 | 2588.0 |
46 | TraesCS4B01G138100 | chr2B | 97.906 | 191 | 4 | 0 | 2202 | 2392 | 409336557 | 409336367 | 1.410000e-86 | 331.0 |
47 | TraesCS4B01G138100 | chr2B | 94.545 | 110 | 6 | 0 | 6644 | 6753 | 701182300 | 701182191 | 3.250000e-38 | 171.0 |
48 | TraesCS4B01G138100 | chr7B | 89.055 | 1809 | 146 | 24 | 3123 | 4899 | 678958925 | 678960713 | 0.000000e+00 | 2196.0 |
49 | TraesCS4B01G138100 | chr7B | 94.444 | 108 | 6 | 0 | 6645 | 6752 | 261055920 | 261056027 | 4.210000e-37 | 167.0 |
50 | TraesCS4B01G138100 | chr7B | 93.023 | 43 | 2 | 1 | 6505 | 6546 | 741664771 | 741664729 | 2.040000e-05 | 62.1 |
51 | TraesCS4B01G138100 | chr7A | 94.137 | 1194 | 53 | 6 | 3747 | 4926 | 692306496 | 692307686 | 0.000000e+00 | 1801.0 |
52 | TraesCS4B01G138100 | chr7A | 99.448 | 181 | 1 | 0 | 2201 | 2381 | 105168987 | 105168807 | 5.070000e-86 | 329.0 |
53 | TraesCS4B01G138100 | chr7A | 93.458 | 107 | 6 | 1 | 6645 | 6751 | 649922542 | 649922437 | 2.530000e-34 | 158.0 |
54 | TraesCS4B01G138100 | chr7A | 88.000 | 125 | 14 | 1 | 6628 | 6752 | 513985788 | 513985911 | 5.480000e-31 | 147.0 |
55 | TraesCS4B01G138100 | chr3D | 86.005 | 1129 | 81 | 16 | 3123 | 4227 | 250927804 | 250926729 | 0.000000e+00 | 1138.0 |
56 | TraesCS4B01G138100 | chr3D | 93.636 | 110 | 7 | 0 | 6642 | 6751 | 435646740 | 435646849 | 1.510000e-36 | 165.0 |
57 | TraesCS4B01G138100 | chr3D | 92.593 | 108 | 8 | 0 | 6645 | 6752 | 172355073 | 172354966 | 9.110000e-34 | 156.0 |
58 | TraesCS4B01G138100 | chr3D | 92.593 | 108 | 6 | 2 | 6645 | 6751 | 103633181 | 103633287 | 3.280000e-33 | 154.0 |
59 | TraesCS4B01G138100 | chr3D | 91.743 | 109 | 9 | 0 | 6644 | 6752 | 70230887 | 70230779 | 1.180000e-32 | 152.0 |
60 | TraesCS4B01G138100 | chr5B | 93.983 | 698 | 41 | 1 | 3123 | 3819 | 259548587 | 259549284 | 0.000000e+00 | 1055.0 |
61 | TraesCS4B01G138100 | chr5B | 94.444 | 108 | 6 | 0 | 6645 | 6752 | 281433786 | 281433893 | 4.210000e-37 | 167.0 |
62 | TraesCS4B01G138100 | chr5B | 93.636 | 110 | 7 | 0 | 6645 | 6754 | 195739513 | 195739404 | 1.510000e-36 | 165.0 |
63 | TraesCS4B01G138100 | chr5B | 93.578 | 109 | 7 | 0 | 6644 | 6752 | 252760682 | 252760790 | 5.440000e-36 | 163.0 |
64 | TraesCS4B01G138100 | chr5B | 93.578 | 109 | 7 | 0 | 6644 | 6752 | 311600659 | 311600551 | 5.440000e-36 | 163.0 |
65 | TraesCS4B01G138100 | chr2D | 83.516 | 1092 | 98 | 25 | 3123 | 4191 | 12047465 | 12048497 | 0.000000e+00 | 944.0 |
66 | TraesCS4B01G138100 | chr2D | 92.793 | 111 | 8 | 0 | 6641 | 6751 | 272263174 | 272263064 | 1.960000e-35 | 161.0 |
67 | TraesCS4B01G138100 | chr2A | 99.451 | 182 | 1 | 0 | 2201 | 2382 | 60738872 | 60739053 | 1.410000e-86 | 331.0 |
68 | TraesCS4B01G138100 | chr2A | 98.913 | 184 | 2 | 0 | 2201 | 2384 | 661716477 | 661716294 | 5.070000e-86 | 329.0 |
69 | TraesCS4B01G138100 | chr2A | 92.661 | 109 | 8 | 0 | 6643 | 6751 | 209894274 | 209894166 | 2.530000e-34 | 158.0 |
70 | TraesCS4B01G138100 | chr1A | 99.448 | 181 | 1 | 0 | 2201 | 2381 | 583789137 | 583789317 | 5.070000e-86 | 329.0 |
71 | TraesCS4B01G138100 | chr1A | 99.444 | 180 | 1 | 0 | 2201 | 2380 | 269572475 | 269572296 | 1.820000e-85 | 327.0 |
72 | TraesCS4B01G138100 | chr1A | 99.444 | 180 | 1 | 0 | 2201 | 2380 | 557920838 | 557921017 | 1.820000e-85 | 327.0 |
73 | TraesCS4B01G138100 | chr1A | 99.441 | 179 | 1 | 0 | 2202 | 2380 | 582360008 | 582360186 | 6.560000e-85 | 326.0 |
74 | TraesCS4B01G138100 | chr1A | 91.892 | 111 | 9 | 0 | 6641 | 6751 | 466906340 | 466906450 | 9.110000e-34 | 156.0 |
75 | TraesCS4B01G138100 | chr1A | 91.892 | 111 | 9 | 0 | 6642 | 6752 | 556786870 | 556786980 | 9.110000e-34 | 156.0 |
76 | TraesCS4B01G138100 | chrUn | 99.444 | 180 | 1 | 0 | 2201 | 2380 | 395339783 | 395339962 | 1.820000e-85 | 327.0 |
77 | TraesCS4B01G138100 | chrUn | 98.901 | 182 | 2 | 0 | 2201 | 2382 | 284001560 | 284001741 | 6.560000e-85 | 326.0 |
78 | TraesCS4B01G138100 | chrUn | 98.844 | 173 | 2 | 0 | 2202 | 2374 | 12801956 | 12801784 | 6.610000e-80 | 309.0 |
79 | TraesCS4B01G138100 | chrUn | 96.721 | 183 | 6 | 0 | 2201 | 2383 | 314724053 | 314724235 | 8.550000e-79 | 305.0 |
80 | TraesCS4B01G138100 | chrUn | 96.629 | 178 | 5 | 1 | 2203 | 2380 | 277314054 | 277314230 | 1.850000e-75 | 294.0 |
81 | TraesCS4B01G138100 | chrUn | 95.628 | 183 | 7 | 1 | 2201 | 2383 | 379839256 | 379839437 | 6.660000e-75 | 292.0 |
82 | TraesCS4B01G138100 | chrUn | 95.628 | 183 | 7 | 1 | 2201 | 2383 | 379897930 | 379898111 | 6.660000e-75 | 292.0 |
83 | TraesCS4B01G138100 | chrUn | 94.624 | 186 | 8 | 2 | 2201 | 2386 | 15977968 | 15978151 | 3.100000e-73 | 287.0 |
84 | TraesCS4B01G138100 | chrUn | 94.565 | 184 | 9 | 1 | 2201 | 2384 | 310883102 | 310882920 | 4.010000e-72 | 283.0 |
85 | TraesCS4B01G138100 | chrUn | 92.661 | 109 | 7 | 1 | 6641 | 6749 | 271105613 | 271105720 | 9.110000e-34 | 156.0 |
86 | TraesCS4B01G138100 | chrUn | 92.661 | 109 | 7 | 1 | 6641 | 6749 | 314057811 | 314057704 | 9.110000e-34 | 156.0 |
87 | TraesCS4B01G138100 | chrUn | 92.593 | 108 | 6 | 2 | 6645 | 6751 | 12279490 | 12279384 | 3.280000e-33 | 154.0 |
88 | TraesCS4B01G138100 | chrUn | 90.991 | 111 | 10 | 0 | 6641 | 6751 | 225570271 | 225570161 | 4.240000e-32 | 150.0 |
89 | TraesCS4B01G138100 | chrUn | 90.991 | 111 | 10 | 0 | 6641 | 6751 | 237454099 | 237454209 | 4.240000e-32 | 150.0 |
90 | TraesCS4B01G138100 | chrUn | 88.785 | 107 | 12 | 0 | 6645 | 6751 | 121132176 | 121132282 | 1.540000e-26 | 132.0 |
91 | TraesCS4B01G138100 | chrUn | 87.288 | 118 | 12 | 3 | 6642 | 6757 | 306051177 | 306051293 | 1.540000e-26 | 132.0 |
92 | TraesCS4B01G138100 | chrUn | 87.288 | 118 | 12 | 3 | 6642 | 6757 | 306068193 | 306068309 | 1.540000e-26 | 132.0 |
93 | TraesCS4B01G138100 | chrUn | 84.416 | 77 | 12 | 0 | 6675 | 6751 | 325158846 | 325158770 | 7.300000e-10 | 76.8 |
94 | TraesCS4B01G138100 | chrUn | 100.000 | 31 | 0 | 0 | 6642 | 6672 | 327154365 | 327154395 | 2.640000e-04 | 58.4 |
95 | TraesCS4B01G138100 | chr6D | 99.444 | 180 | 1 | 0 | 2201 | 2380 | 128903241 | 128903062 | 1.820000e-85 | 327.0 |
96 | TraesCS4B01G138100 | chr6D | 98.246 | 171 | 3 | 0 | 2199 | 2369 | 317477208 | 317477378 | 3.980000e-77 | 300.0 |
97 | TraesCS4B01G138100 | chr6D | 96.667 | 180 | 5 | 1 | 2201 | 2380 | 95293694 | 95293872 | 1.430000e-76 | 298.0 |
98 | TraesCS4B01G138100 | chr6D | 92.593 | 108 | 8 | 0 | 6645 | 6752 | 28687678 | 28687785 | 9.110000e-34 | 156.0 |
99 | TraesCS4B01G138100 | chr6D | 90.654 | 107 | 10 | 0 | 6645 | 6751 | 278641729 | 278641623 | 7.090000e-30 | 143.0 |
100 | TraesCS4B01G138100 | chr6D | 94.595 | 37 | 1 | 1 | 4988 | 5023 | 34947973 | 34947937 | 1.000000e-03 | 56.5 |
101 | TraesCS4B01G138100 | chr6A | 99.444 | 180 | 1 | 0 | 2201 | 2380 | 7980296 | 7980475 | 1.820000e-85 | 327.0 |
102 | TraesCS4B01G138100 | chr6A | 92.661 | 109 | 8 | 0 | 6643 | 6751 | 477910880 | 477910772 | 2.530000e-34 | 158.0 |
103 | TraesCS4B01G138100 | chr3A | 98.387 | 186 | 2 | 1 | 2201 | 2386 | 102618079 | 102618263 | 6.560000e-85 | 326.0 |
104 | TraesCS4B01G138100 | chr3A | 93.578 | 109 | 7 | 0 | 6645 | 6753 | 576567375 | 576567267 | 5.440000e-36 | 163.0 |
105 | TraesCS4B01G138100 | chr5D | 98.370 | 184 | 3 | 0 | 2201 | 2384 | 50385994 | 50386177 | 2.360000e-84 | 324.0 |
106 | TraesCS4B01G138100 | chr5D | 83.221 | 149 | 23 | 2 | 6317 | 6464 | 487944591 | 487944738 | 1.190000e-27 | 135.0 |
107 | TraesCS4B01G138100 | chr5D | 97.222 | 36 | 1 | 0 | 6505 | 6540 | 447140537 | 447140572 | 2.040000e-05 | 62.1 |
108 | TraesCS4B01G138100 | chr3B | 97.368 | 190 | 5 | 0 | 2201 | 2390 | 754223289 | 754223478 | 2.360000e-84 | 324.0 |
109 | TraesCS4B01G138100 | chr3B | 97.368 | 190 | 5 | 0 | 2201 | 2390 | 754285790 | 754285601 | 2.360000e-84 | 324.0 |
110 | TraesCS4B01G138100 | chr1D | 98.883 | 179 | 2 | 0 | 2202 | 2380 | 159912380 | 159912202 | 3.050000e-83 | 320.0 |
111 | TraesCS4B01G138100 | chr1D | 91.589 | 107 | 9 | 0 | 6645 | 6751 | 100826492 | 100826386 | 1.520000e-31 | 148.0 |
112 | TraesCS4B01G138100 | chr5A | 90.244 | 123 | 11 | 1 | 6643 | 6765 | 16500063 | 16499942 | 7.040000e-35 | 159.0 |
113 | TraesCS4B01G138100 | chr5A | 92.035 | 113 | 9 | 0 | 6642 | 6754 | 663713645 | 663713757 | 7.040000e-35 | 159.0 |
114 | TraesCS4B01G138100 | chr5A | 93.458 | 107 | 7 | 0 | 6645 | 6751 | 694973920 | 694973814 | 7.040000e-35 | 159.0 |
115 | TraesCS4B01G138100 | chr7D | 76.991 | 226 | 37 | 10 | 6322 | 6538 | 627876410 | 627876191 | 1.550000e-21 | 115.0 |
116 | TraesCS4B01G138100 | chr7D | 76.419 | 229 | 40 | 9 | 6319 | 6540 | 62160390 | 62160611 | 2.000000e-20 | 111.0 |
117 | TraesCS4B01G138100 | chr7D | 76.444 | 225 | 39 | 9 | 6322 | 6538 | 627700538 | 627700320 | 7.190000e-20 | 110.0 |
118 | TraesCS4B01G138100 | chr7D | 82.787 | 122 | 20 | 1 | 6322 | 6442 | 627760038 | 627759917 | 2.590000e-19 | 108.0 |
119 | TraesCS4B01G138100 | chr7D | 82.787 | 122 | 20 | 1 | 6322 | 6442 | 627815221 | 627815100 | 2.590000e-19 | 108.0 |
120 | TraesCS4B01G138100 | chr7D | 81.148 | 122 | 22 | 1 | 6322 | 6442 | 627965504 | 627965383 | 5.600000e-16 | 97.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G138100 | chr4B | 182234039 | 182240823 | 6784 | False | 12530.000000 | 12530 | 100.000000 | 1 | 6785 | 1 | chr4B.!!$F1 | 6784 |
1 | TraesCS4B01G138100 | chr4B | 471720625 | 471722454 | 1829 | False | 2808.000000 | 2808 | 94.590000 | 3123 | 4926 | 1 | chr4B.!!$F4 | 1803 |
2 | TraesCS4B01G138100 | chr4B | 517960637 | 517962222 | 1585 | False | 2457.000000 | 2457 | 94.956000 | 3123 | 4676 | 1 | chr4B.!!$F5 | 1553 |
3 | TraesCS4B01G138100 | chr4B | 408981222 | 408982388 | 1166 | False | 1818.000000 | 1818 | 94.957000 | 3773 | 4928 | 1 | chr4B.!!$F2 | 1155 |
4 | TraesCS4B01G138100 | chr4B | 103796633 | 103797837 | 1204 | True | 1677.000000 | 1677 | 92.136000 | 3747 | 4927 | 1 | chr4B.!!$R2 | 1180 |
5 | TraesCS4B01G138100 | chr4B | 73278972 | 73279972 | 1000 | True | 1504.000000 | 1504 | 93.912000 | 3123 | 4115 | 1 | chr4B.!!$R1 | 992 |
6 | TraesCS4B01G138100 | chr4A | 661533954 | 661535122 | 1168 | True | 1674.000000 | 1674 | 92.668000 | 3747 | 4905 | 1 | chr4A.!!$R4 | 1158 |
7 | TraesCS4B01G138100 | chr4A | 587313270 | 587314264 | 994 | True | 1393.000000 | 1393 | 91.984000 | 3122 | 4115 | 1 | chr4A.!!$R3 | 993 |
8 | TraesCS4B01G138100 | chr4A | 450336050 | 450341130 | 5080 | False | 1134.333333 | 3306 | 91.448333 | 1 | 6647 | 6 | chr4A.!!$F2 | 6646 |
9 | TraesCS4B01G138100 | chr4D | 119744916 | 119749398 | 4482 | False | 1350.000000 | 3304 | 93.035600 | 161 | 6521 | 5 | chr4D.!!$F6 | 6360 |
10 | TraesCS4B01G138100 | chr6B | 502312717 | 502314517 | 1800 | False | 2719.000000 | 2719 | 93.979000 | 3123 | 4926 | 1 | chr6B.!!$F2 | 1803 |
11 | TraesCS4B01G138100 | chr6B | 529753778 | 529755566 | 1788 | True | 2440.000000 | 2440 | 91.492000 | 3123 | 4899 | 1 | chr6B.!!$R2 | 1776 |
12 | TraesCS4B01G138100 | chr1B | 313094430 | 313096252 | 1822 | False | 2638.000000 | 2638 | 93.188000 | 3123 | 4905 | 1 | chr1B.!!$F4 | 1782 |
13 | TraesCS4B01G138100 | chr1B | 321879997 | 321881179 | 1182 | True | 1742.000000 | 1742 | 93.322000 | 3747 | 4929 | 1 | chr1B.!!$R2 | 1182 |
14 | TraesCS4B01G138100 | chr1B | 392532713 | 392533677 | 964 | True | 1290.000000 | 1290 | 90.688000 | 3123 | 4106 | 1 | chr1B.!!$R3 | 983 |
15 | TraesCS4B01G138100 | chr1B | 312926547 | 312927494 | 947 | True | 1284.000000 | 1284 | 91.254000 | 3167 | 4106 | 1 | chr1B.!!$R1 | 939 |
16 | TraesCS4B01G138100 | chr1B | 570749449 | 570751492 | 2043 | True | 745.500000 | 754 | 93.339500 | 3122 | 3624 | 2 | chr1B.!!$R5 | 502 |
17 | TraesCS4B01G138100 | chr2B | 45579994 | 45581796 | 1802 | True | 2588.000000 | 2588 | 92.666000 | 3123 | 4926 | 1 | chr2B.!!$R1 | 1803 |
18 | TraesCS4B01G138100 | chr7B | 678958925 | 678960713 | 1788 | False | 2196.000000 | 2196 | 89.055000 | 3123 | 4899 | 1 | chr7B.!!$F2 | 1776 |
19 | TraesCS4B01G138100 | chr7A | 692306496 | 692307686 | 1190 | False | 1801.000000 | 1801 | 94.137000 | 3747 | 4926 | 1 | chr7A.!!$F2 | 1179 |
20 | TraesCS4B01G138100 | chr3D | 250926729 | 250927804 | 1075 | True | 1138.000000 | 1138 | 86.005000 | 3123 | 4227 | 1 | chr3D.!!$R3 | 1104 |
21 | TraesCS4B01G138100 | chr5B | 259548587 | 259549284 | 697 | False | 1055.000000 | 1055 | 93.983000 | 3123 | 3819 | 1 | chr5B.!!$F2 | 696 |
22 | TraesCS4B01G138100 | chr2D | 12047465 | 12048497 | 1032 | False | 944.000000 | 944 | 83.516000 | 3123 | 4191 | 1 | chr2D.!!$F1 | 1068 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
445 | 469 | 0.544697 | ACATAATCGAAGGGCGGGTT | 59.455 | 50.0 | 0.00 | 0.0 | 41.33 | 4.11 | F |
2263 | 2309 | 0.036294 | GGAAGGGTCCGACCTCTTTG | 60.036 | 60.0 | 17.27 | 0.0 | 40.87 | 2.77 | F |
2264 | 2310 | 0.036294 | GAAGGGTCCGACCTCTTTGG | 60.036 | 60.0 | 17.27 | 0.0 | 40.87 | 3.28 | F |
2348 | 2394 | 0.037303 | ACCTCATGGTCACAAGGCAG | 59.963 | 55.0 | 0.00 | 0.0 | 44.78 | 4.85 | F |
2361 | 2407 | 0.111253 | AAGGCAGCAGCTTTACCACT | 59.889 | 50.0 | 0.00 | 0.0 | 38.40 | 4.00 | F |
3598 | 3673 | 0.549902 | TGGATCCCATGGACACCACT | 60.550 | 55.0 | 15.22 | 0.0 | 36.88 | 4.00 | F |
4628 | 6645 | 0.598562 | GACAGACAGCGGAAGAGACA | 59.401 | 55.0 | 0.00 | 0.0 | 0.00 | 3.41 | F |
5359 | 7434 | 0.177141 | TCGTCCGGATGTTGGATTCC | 59.823 | 55.0 | 22.88 | 0.0 | 37.93 | 3.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2318 | 2364 | 0.036164 | CCATGAGGTCACGGGTTCAA | 59.964 | 55.000 | 0.00 | 0.0 | 0.00 | 2.69 | R |
3565 | 3640 | 0.613260 | GATCCAGGTGGCTGTACACA | 59.387 | 55.000 | 0.00 | 0.0 | 43.08 | 3.72 | R |
3612 | 3687 | 0.680601 | CAGGTGGCCATACACATGCA | 60.681 | 55.000 | 9.72 | 0.0 | 44.59 | 3.96 | R |
3766 | 3841 | 1.909302 | CAAGCCCTCCACTCTTTCCTA | 59.091 | 52.381 | 0.00 | 0.0 | 0.00 | 2.94 | R |
4614 | 6631 | 1.476007 | AAGCCTGTCTCTTCCGCTGT | 61.476 | 55.000 | 0.00 | 0.0 | 0.00 | 4.40 | R |
4937 | 6954 | 0.179156 | GCGCAACATAGCTGCACAAT | 60.179 | 50.000 | 0.30 | 0.0 | 39.91 | 2.71 | R |
5644 | 7749 | 0.314302 | CGGTTCTGTCGTGGTCTTCT | 59.686 | 55.000 | 0.00 | 0.0 | 0.00 | 2.85 | R |
6733 | 9179 | 1.719529 | TGTACTCCCTCCGTTCCAAA | 58.280 | 50.000 | 0.00 | 0.0 | 0.00 | 3.28 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
42 | 43 | 2.715763 | TGGATCCCAGGTACCCTATC | 57.284 | 55.000 | 9.90 | 6.56 | 29.64 | 2.08 |
43 | 44 | 1.151413 | TGGATCCCAGGTACCCTATCC | 59.849 | 57.143 | 18.78 | 18.78 | 37.01 | 2.59 |
59 | 60 | 4.016851 | CCCTATCCATCCATCCATCCAATT | 60.017 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
68 | 69 | 2.826674 | TCCATCCAATTCCCCTTCAC | 57.173 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
77 | 78 | 0.845102 | TTCCCCTTCACCCCCTCTTC | 60.845 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
78 | 79 | 1.229984 | CCCCTTCACCCCCTCTTCT | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 2.85 |
79 | 80 | 1.275421 | CCCCTTCACCCCCTCTTCTC | 61.275 | 65.000 | 0.00 | 0.00 | 0.00 | 2.87 |
80 | 81 | 1.617947 | CCCTTCACCCCCTCTTCTCG | 61.618 | 65.000 | 0.00 | 0.00 | 0.00 | 4.04 |
93 | 99 | 1.746727 | CTTCTCGGAATGCGAGCGTG | 61.747 | 60.000 | 19.26 | 7.74 | 33.88 | 5.34 |
94 | 100 | 3.918220 | CTCGGAATGCGAGCGTGC | 61.918 | 66.667 | 11.81 | 0.00 | 0.00 | 5.34 |
157 | 178 | 2.770904 | TCCCTCCGCCATTACCCC | 60.771 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
165 | 186 | 1.042559 | CGCCATTACCCCCAATGCTT | 61.043 | 55.000 | 0.00 | 0.00 | 35.06 | 3.91 |
186 | 207 | 1.368137 | GCTGATTCGATTTCGCCGC | 60.368 | 57.895 | 0.00 | 0.00 | 39.60 | 6.53 |
208 | 229 | 3.191371 | CCCAGATTTCAGGCTACAAACAC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
232 | 253 | 9.837525 | CACTTTTTATTTCATTCTTCTCTCCAG | 57.162 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
233 | 254 | 9.018582 | ACTTTTTATTTCATTCTTCTCTCCAGG | 57.981 | 33.333 | 0.00 | 0.00 | 0.00 | 4.45 |
257 | 278 | 8.270744 | AGGTTGCTCTTCATCAGATTTATAAGT | 58.729 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
294 | 315 | 4.083057 | GCATTTAGGATGCTAGCTTAAGGC | 60.083 | 45.833 | 17.23 | 10.10 | 41.52 | 4.35 |
295 | 316 | 4.771114 | TTTAGGATGCTAGCTTAAGGCA | 57.229 | 40.909 | 17.23 | 5.99 | 44.79 | 4.75 |
296 | 317 | 2.629336 | AGGATGCTAGCTTAAGGCAC | 57.371 | 50.000 | 17.23 | 0.00 | 44.79 | 5.01 |
297 | 318 | 1.202580 | AGGATGCTAGCTTAAGGCACG | 60.203 | 52.381 | 17.23 | 0.00 | 44.79 | 5.34 |
345 | 366 | 1.061799 | CTTTGCTTAGCTTGCGTGCG | 61.062 | 55.000 | 5.60 | 0.00 | 38.13 | 5.34 |
369 | 390 | 2.027625 | CTGCGTTGTCGGTTCCCTC | 61.028 | 63.158 | 0.00 | 0.00 | 37.56 | 4.30 |
398 | 419 | 3.803368 | GCCCAATTTTCTGTTTCTGTGGG | 60.803 | 47.826 | 0.00 | 0.00 | 46.09 | 4.61 |
445 | 469 | 0.544697 | ACATAATCGAAGGGCGGGTT | 59.455 | 50.000 | 0.00 | 0.00 | 41.33 | 4.11 |
553 | 589 | 1.560923 | CGTAGCTCTTGGATTGGACG | 58.439 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
623 | 659 | 2.049063 | GCACGTCAGTCCGCTTCT | 60.049 | 61.111 | 0.00 | 0.00 | 0.00 | 2.85 |
624 | 660 | 2.375766 | GCACGTCAGTCCGCTTCTG | 61.376 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
678 | 714 | 8.604890 | GTTCTTTCTGCATAAGTAATACTGGTC | 58.395 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
695 | 734 | 1.661112 | GGTCTGAAGCTACATTCGTGC | 59.339 | 52.381 | 0.00 | 0.00 | 31.52 | 5.34 |
840 | 883 | 7.833285 | TCCACCATTTCTTTTATATTAGGGC | 57.167 | 36.000 | 0.00 | 0.00 | 0.00 | 5.19 |
863 | 906 | 5.433526 | CAGGTTTATTATCTCCGTGGGAAA | 58.566 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
883 | 926 | 2.529151 | AGCTGCAAACAGTTTGAAACG | 58.471 | 42.857 | 27.16 | 9.23 | 46.30 | 3.60 |
909 | 952 | 5.977635 | TGATATTAAGTGTCCACAGACCAG | 58.022 | 41.667 | 0.00 | 0.00 | 42.81 | 4.00 |
912 | 955 | 1.344953 | AAGTGTCCACAGACCAGGCA | 61.345 | 55.000 | 0.00 | 0.00 | 42.81 | 4.75 |
913 | 956 | 1.148273 | GTGTCCACAGACCAGGCAA | 59.852 | 57.895 | 0.00 | 0.00 | 42.81 | 4.52 |
1143 | 1186 | 4.356405 | TGTGATATGCCTTACCATCCAG | 57.644 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
1326 | 1369 | 5.647658 | TGTTGAATCAACGGATAAAGATGCT | 59.352 | 36.000 | 19.66 | 0.00 | 46.13 | 3.79 |
1673 | 1716 | 9.981114 | CCTTAACAATTTGTGAGTTTTCCTATT | 57.019 | 29.630 | 2.13 | 0.00 | 0.00 | 1.73 |
1706 | 1749 | 4.454161 | CGGTGACAAAATGGTTGTCTATGA | 59.546 | 41.667 | 17.42 | 0.00 | 46.53 | 2.15 |
1751 | 1794 | 4.558697 | GCTGGAAAGTTTATTGTGTCACCC | 60.559 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
1762 | 1805 | 0.606673 | GTGTCACCCCCTTTCTGCTC | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1914 | 1957 | 6.482641 | CCAGAGGTCAGAATATGTCTTCATTG | 59.517 | 42.308 | 0.00 | 0.00 | 32.70 | 2.82 |
2168 | 2214 | 0.461961 | GGCGTGAGTAGCTCCTTCAT | 59.538 | 55.000 | 0.00 | 0.00 | 34.52 | 2.57 |
2196 | 2242 | 9.447157 | AAACTCATTCTTTTCTTAGGATCTCTG | 57.553 | 33.333 | 0.00 | 0.00 | 0.00 | 3.35 |
2197 | 2243 | 8.144862 | ACTCATTCTTTTCTTAGGATCTCTGT | 57.855 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2198 | 2244 | 8.040132 | ACTCATTCTTTTCTTAGGATCTCTGTG | 58.960 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
2199 | 2245 | 7.334090 | TCATTCTTTTCTTAGGATCTCTGTGG | 58.666 | 38.462 | 0.00 | 0.00 | 0.00 | 4.17 |
2200 | 2246 | 6.935240 | TTCTTTTCTTAGGATCTCTGTGGA | 57.065 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
2201 | 2247 | 6.537453 | TCTTTTCTTAGGATCTCTGTGGAG | 57.463 | 41.667 | 0.00 | 0.00 | 40.73 | 3.86 |
2202 | 2248 | 5.423610 | TCTTTTCTTAGGATCTCTGTGGAGG | 59.576 | 44.000 | 0.00 | 0.00 | 39.86 | 4.30 |
2203 | 2249 | 3.320610 | TCTTAGGATCTCTGTGGAGGG | 57.679 | 52.381 | 0.00 | 0.00 | 39.86 | 4.30 |
2204 | 2250 | 1.691434 | CTTAGGATCTCTGTGGAGGGC | 59.309 | 57.143 | 0.00 | 0.00 | 39.86 | 5.19 |
2205 | 2251 | 0.636647 | TAGGATCTCTGTGGAGGGCA | 59.363 | 55.000 | 0.00 | 0.00 | 39.86 | 5.36 |
2206 | 2252 | 0.690411 | AGGATCTCTGTGGAGGGCAG | 60.690 | 60.000 | 0.00 | 0.00 | 39.86 | 4.85 |
2207 | 2253 | 1.145819 | GATCTCTGTGGAGGGCAGC | 59.854 | 63.158 | 0.00 | 0.00 | 39.86 | 5.25 |
2208 | 2254 | 2.322638 | GATCTCTGTGGAGGGCAGCC | 62.323 | 65.000 | 1.26 | 1.26 | 39.86 | 4.85 |
2209 | 2255 | 4.106925 | CTCTGTGGAGGGCAGCCC | 62.107 | 72.222 | 24.90 | 24.90 | 45.90 | 5.19 |
2220 | 2266 | 2.045045 | GCAGCCCCAGTGCATGTA | 60.045 | 61.111 | 0.00 | 0.00 | 40.86 | 2.29 |
2221 | 2267 | 2.117156 | GCAGCCCCAGTGCATGTAG | 61.117 | 63.158 | 0.00 | 0.00 | 40.86 | 2.74 |
2222 | 2268 | 2.117156 | CAGCCCCAGTGCATGTAGC | 61.117 | 63.158 | 0.00 | 0.00 | 45.96 | 3.58 |
2223 | 2269 | 2.273449 | GCCCCAGTGCATGTAGCT | 59.727 | 61.111 | 0.00 | 0.00 | 45.94 | 3.32 |
2224 | 2270 | 1.821332 | GCCCCAGTGCATGTAGCTC | 60.821 | 63.158 | 0.00 | 0.00 | 45.94 | 4.09 |
2225 | 2271 | 1.153086 | CCCCAGTGCATGTAGCTCC | 60.153 | 63.158 | 0.00 | 0.00 | 45.94 | 4.70 |
2226 | 2272 | 1.153086 | CCCAGTGCATGTAGCTCCC | 60.153 | 63.158 | 0.00 | 0.00 | 45.94 | 4.30 |
2227 | 2273 | 1.522355 | CCAGTGCATGTAGCTCCCG | 60.522 | 63.158 | 0.00 | 0.00 | 45.94 | 5.14 |
2228 | 2274 | 2.176273 | CAGTGCATGTAGCTCCCGC | 61.176 | 63.158 | 0.00 | 0.00 | 45.94 | 6.13 |
2230 | 2276 | 1.450312 | GTGCATGTAGCTCCCGCTT | 60.450 | 57.895 | 0.00 | 0.00 | 46.47 | 4.68 |
2231 | 2277 | 1.450134 | TGCATGTAGCTCCCGCTTG | 60.450 | 57.895 | 0.00 | 0.00 | 46.47 | 4.01 |
2232 | 2278 | 2.828128 | GCATGTAGCTCCCGCTTGC | 61.828 | 63.158 | 0.00 | 0.00 | 46.47 | 4.01 |
2233 | 2279 | 2.202932 | ATGTAGCTCCCGCTTGCG | 60.203 | 61.111 | 8.14 | 8.14 | 46.47 | 4.85 |
2236 | 2282 | 4.819761 | TAGCTCCCGCTTGCGCAG | 62.820 | 66.667 | 11.31 | 6.32 | 46.47 | 5.18 |
2248 | 2294 | 4.785453 | GCGCAGGGTCTGGGGAAG | 62.785 | 72.222 | 0.30 | 0.00 | 43.28 | 3.46 |
2249 | 2295 | 4.101448 | CGCAGGGTCTGGGGAAGG | 62.101 | 72.222 | 4.35 | 0.00 | 40.11 | 3.46 |
2250 | 2296 | 3.732849 | GCAGGGTCTGGGGAAGGG | 61.733 | 72.222 | 0.00 | 0.00 | 31.21 | 3.95 |
2251 | 2297 | 2.204151 | CAGGGTCTGGGGAAGGGT | 60.204 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
2252 | 2298 | 2.125225 | AGGGTCTGGGGAAGGGTC | 59.875 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
2253 | 2299 | 3.015753 | GGGTCTGGGGAAGGGTCC | 61.016 | 72.222 | 0.00 | 0.00 | 44.10 | 4.46 |
2254 | 2300 | 3.400054 | GGTCTGGGGAAGGGTCCG | 61.400 | 72.222 | 0.00 | 0.00 | 46.04 | 4.79 |
2255 | 2301 | 2.284405 | GTCTGGGGAAGGGTCCGA | 60.284 | 66.667 | 0.00 | 0.00 | 46.04 | 4.55 |
2256 | 2302 | 2.284405 | TCTGGGGAAGGGTCCGAC | 60.284 | 66.667 | 0.00 | 0.00 | 46.04 | 4.79 |
2257 | 2303 | 3.400054 | CTGGGGAAGGGTCCGACC | 61.400 | 72.222 | 9.30 | 9.30 | 46.04 | 4.79 |
2258 | 2304 | 3.925914 | CTGGGGAAGGGTCCGACCT | 62.926 | 68.421 | 17.27 | 0.00 | 46.04 | 3.85 |
2259 | 2305 | 3.082055 | GGGGAAGGGTCCGACCTC | 61.082 | 72.222 | 17.27 | 7.81 | 46.04 | 3.85 |
2260 | 2306 | 2.039137 | GGGAAGGGTCCGACCTCT | 59.961 | 66.667 | 17.27 | 9.76 | 46.04 | 3.69 |
2261 | 2307 | 1.612739 | GGGAAGGGTCCGACCTCTT | 60.613 | 63.158 | 17.27 | 16.96 | 46.04 | 2.85 |
2262 | 2308 | 1.199425 | GGGAAGGGTCCGACCTCTTT | 61.199 | 60.000 | 17.27 | 9.41 | 46.04 | 2.52 |
2263 | 2309 | 0.036294 | GGAAGGGTCCGACCTCTTTG | 60.036 | 60.000 | 17.27 | 0.00 | 40.87 | 2.77 |
2264 | 2310 | 0.036294 | GAAGGGTCCGACCTCTTTGG | 60.036 | 60.000 | 17.27 | 0.00 | 40.87 | 3.28 |
2265 | 2311 | 1.489560 | AAGGGTCCGACCTCTTTGGG | 61.490 | 60.000 | 17.27 | 0.00 | 40.87 | 4.12 |
2266 | 2312 | 2.222013 | GGGTCCGACCTCTTTGGGT | 61.222 | 63.158 | 17.27 | 0.00 | 43.07 | 4.51 |
2276 | 2322 | 4.467198 | ACCTCTTTGGGTCTATTGTACG | 57.533 | 45.455 | 0.00 | 0.00 | 41.11 | 3.67 |
2277 | 2323 | 3.195661 | CCTCTTTGGGTCTATTGTACGC | 58.804 | 50.000 | 0.00 | 0.00 | 0.00 | 4.42 |
2278 | 2324 | 3.369052 | CCTCTTTGGGTCTATTGTACGCA | 60.369 | 47.826 | 0.00 | 0.00 | 37.94 | 5.24 |
2279 | 2325 | 3.857052 | TCTTTGGGTCTATTGTACGCAG | 58.143 | 45.455 | 0.00 | 0.00 | 40.36 | 5.18 |
2280 | 2326 | 2.018542 | TTGGGTCTATTGTACGCAGC | 57.981 | 50.000 | 0.00 | 0.00 | 40.36 | 5.25 |
2281 | 2327 | 0.177141 | TGGGTCTATTGTACGCAGCC | 59.823 | 55.000 | 0.00 | 0.00 | 35.18 | 4.85 |
2282 | 2328 | 0.464452 | GGGTCTATTGTACGCAGCCT | 59.536 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2283 | 2329 | 1.134491 | GGGTCTATTGTACGCAGCCTT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
2284 | 2330 | 2.629051 | GGTCTATTGTACGCAGCCTTT | 58.371 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
2285 | 2331 | 2.608090 | GGTCTATTGTACGCAGCCTTTC | 59.392 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
2286 | 2332 | 2.608090 | GTCTATTGTACGCAGCCTTTCC | 59.392 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
2287 | 2333 | 1.940613 | CTATTGTACGCAGCCTTTCCC | 59.059 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
2288 | 2334 | 0.328258 | ATTGTACGCAGCCTTTCCCT | 59.672 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2289 | 2335 | 0.978151 | TTGTACGCAGCCTTTCCCTA | 59.022 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2290 | 2336 | 0.248289 | TGTACGCAGCCTTTCCCTAC | 59.752 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2291 | 2337 | 0.248289 | GTACGCAGCCTTTCCCTACA | 59.752 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2292 | 2338 | 1.134491 | GTACGCAGCCTTTCCCTACAT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
2293 | 2339 | 0.328258 | ACGCAGCCTTTCCCTACATT | 59.672 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2294 | 2340 | 1.271926 | ACGCAGCCTTTCCCTACATTT | 60.272 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
2295 | 2341 | 1.401905 | CGCAGCCTTTCCCTACATTTC | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
2296 | 2342 | 2.728007 | GCAGCCTTTCCCTACATTTCT | 58.272 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
2297 | 2343 | 2.424956 | GCAGCCTTTCCCTACATTTCTG | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2298 | 2344 | 2.424956 | CAGCCTTTCCCTACATTTCTGC | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2299 | 2345 | 2.041620 | AGCCTTTCCCTACATTTCTGCA | 59.958 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
2300 | 2346 | 2.825532 | GCCTTTCCCTACATTTCTGCAA | 59.174 | 45.455 | 0.00 | 0.00 | 0.00 | 4.08 |
2301 | 2347 | 3.119352 | GCCTTTCCCTACATTTCTGCAAG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
2302 | 2348 | 4.335416 | CCTTTCCCTACATTTCTGCAAGA | 58.665 | 43.478 | 0.00 | 0.00 | 44.68 | 3.02 |
2312 | 2358 | 3.329300 | TCTGCAAGAGGCTGTTTCC | 57.671 | 52.632 | 0.00 | 0.00 | 38.67 | 3.13 |
2313 | 2359 | 0.473755 | TCTGCAAGAGGCTGTTTCCA | 59.526 | 50.000 | 0.00 | 0.00 | 38.67 | 3.53 |
2314 | 2360 | 0.879765 | CTGCAAGAGGCTGTTTCCAG | 59.120 | 55.000 | 0.00 | 0.00 | 45.15 | 3.86 |
2315 | 2361 | 0.538057 | TGCAAGAGGCTGTTTCCAGG | 60.538 | 55.000 | 0.00 | 0.00 | 45.15 | 4.45 |
2316 | 2362 | 0.250901 | GCAAGAGGCTGTTTCCAGGA | 60.251 | 55.000 | 0.00 | 0.00 | 39.22 | 3.86 |
2317 | 2363 | 1.528129 | CAAGAGGCTGTTTCCAGGAC | 58.472 | 55.000 | 0.00 | 0.00 | 39.22 | 3.85 |
2318 | 2364 | 1.072965 | CAAGAGGCTGTTTCCAGGACT | 59.927 | 52.381 | 0.00 | 0.00 | 39.22 | 3.85 |
2319 | 2365 | 1.439543 | AGAGGCTGTTTCCAGGACTT | 58.560 | 50.000 | 0.00 | 0.00 | 39.22 | 3.01 |
2320 | 2366 | 1.072965 | AGAGGCTGTTTCCAGGACTTG | 59.927 | 52.381 | 0.00 | 0.00 | 39.22 | 3.16 |
2321 | 2367 | 1.072331 | GAGGCTGTTTCCAGGACTTGA | 59.928 | 52.381 | 0.00 | 0.00 | 39.22 | 3.02 |
2322 | 2368 | 1.494721 | AGGCTGTTTCCAGGACTTGAA | 59.505 | 47.619 | 0.00 | 0.00 | 39.22 | 2.69 |
2323 | 2369 | 1.609072 | GGCTGTTTCCAGGACTTGAAC | 59.391 | 52.381 | 0.00 | 0.00 | 39.22 | 3.18 |
2324 | 2370 | 1.609072 | GCTGTTTCCAGGACTTGAACC | 59.391 | 52.381 | 0.00 | 0.00 | 39.22 | 3.62 |
2325 | 2371 | 2.230660 | CTGTTTCCAGGACTTGAACCC | 58.769 | 52.381 | 0.00 | 0.00 | 34.90 | 4.11 |
2326 | 2372 | 1.235724 | GTTTCCAGGACTTGAACCCG | 58.764 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2327 | 2373 | 0.841289 | TTTCCAGGACTTGAACCCGT | 59.159 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2328 | 2374 | 0.107831 | TTCCAGGACTTGAACCCGTG | 59.892 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2329 | 2375 | 0.761323 | TCCAGGACTTGAACCCGTGA | 60.761 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2330 | 2376 | 0.602905 | CCAGGACTTGAACCCGTGAC | 60.603 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2331 | 2377 | 0.602905 | CAGGACTTGAACCCGTGACC | 60.603 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2332 | 2378 | 0.763223 | AGGACTTGAACCCGTGACCT | 60.763 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2333 | 2379 | 0.320508 | GGACTTGAACCCGTGACCTC | 60.321 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2334 | 2380 | 0.391597 | GACTTGAACCCGTGACCTCA | 59.608 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2335 | 2381 | 1.002087 | GACTTGAACCCGTGACCTCAT | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2336 | 2382 | 1.270839 | ACTTGAACCCGTGACCTCATG | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
2347 | 2393 | 2.154139 | ACCTCATGGTCACAAGGCA | 58.846 | 52.632 | 0.00 | 0.00 | 44.78 | 4.75 |
2348 | 2394 | 0.037303 | ACCTCATGGTCACAAGGCAG | 59.963 | 55.000 | 0.00 | 0.00 | 44.78 | 4.85 |
2349 | 2395 | 1.310933 | CCTCATGGTCACAAGGCAGC | 61.311 | 60.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2350 | 2396 | 0.607217 | CTCATGGTCACAAGGCAGCA | 60.607 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2351 | 2397 | 0.607217 | TCATGGTCACAAGGCAGCAG | 60.607 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2352 | 2398 | 1.975407 | ATGGTCACAAGGCAGCAGC | 60.975 | 57.895 | 0.00 | 0.00 | 41.10 | 5.25 |
2353 | 2399 | 2.282040 | GGTCACAAGGCAGCAGCT | 60.282 | 61.111 | 0.00 | 0.00 | 41.70 | 4.24 |
2354 | 2400 | 1.900498 | GGTCACAAGGCAGCAGCTT | 60.900 | 57.895 | 0.00 | 0.00 | 41.70 | 3.74 |
2355 | 2401 | 1.458639 | GGTCACAAGGCAGCAGCTTT | 61.459 | 55.000 | 0.00 | 0.00 | 41.17 | 3.51 |
2356 | 2402 | 1.238439 | GTCACAAGGCAGCAGCTTTA | 58.762 | 50.000 | 0.00 | 0.00 | 38.07 | 1.85 |
2357 | 2403 | 1.068954 | GTCACAAGGCAGCAGCTTTAC | 60.069 | 52.381 | 0.00 | 0.00 | 38.07 | 2.01 |
2358 | 2404 | 0.242017 | CACAAGGCAGCAGCTTTACC | 59.758 | 55.000 | 0.00 | 0.00 | 38.07 | 2.85 |
2359 | 2405 | 0.178992 | ACAAGGCAGCAGCTTTACCA | 60.179 | 50.000 | 0.00 | 0.00 | 38.07 | 3.25 |
2360 | 2406 | 0.242017 | CAAGGCAGCAGCTTTACCAC | 59.758 | 55.000 | 0.00 | 0.00 | 38.07 | 4.16 |
2361 | 2407 | 0.111253 | AAGGCAGCAGCTTTACCACT | 59.889 | 50.000 | 0.00 | 0.00 | 38.40 | 4.00 |
2362 | 2408 | 0.607489 | AGGCAGCAGCTTTACCACTG | 60.607 | 55.000 | 0.00 | 0.00 | 41.70 | 3.66 |
2366 | 2412 | 2.870372 | CAGCTTTACCACTGCGCC | 59.130 | 61.111 | 4.18 | 0.00 | 0.00 | 6.53 |
2367 | 2413 | 1.965930 | CAGCTTTACCACTGCGCCA | 60.966 | 57.895 | 4.18 | 0.00 | 0.00 | 5.69 |
2368 | 2414 | 1.228124 | AGCTTTACCACTGCGCCAA | 60.228 | 52.632 | 4.18 | 0.00 | 0.00 | 4.52 |
2369 | 2415 | 1.210155 | GCTTTACCACTGCGCCAAG | 59.790 | 57.895 | 4.18 | 0.00 | 0.00 | 3.61 |
2370 | 2416 | 1.875963 | CTTTACCACTGCGCCAAGG | 59.124 | 57.895 | 4.18 | 6.21 | 0.00 | 3.61 |
2371 | 2417 | 2.200170 | CTTTACCACTGCGCCAAGGC | 62.200 | 60.000 | 4.18 | 0.00 | 37.85 | 4.35 |
2372 | 2418 | 2.690653 | TTTACCACTGCGCCAAGGCT | 62.691 | 55.000 | 4.18 | 0.00 | 39.32 | 4.58 |
2373 | 2419 | 3.605749 | TACCACTGCGCCAAGGCTC | 62.606 | 63.158 | 4.18 | 1.20 | 39.32 | 4.70 |
2387 | 2433 | 1.886422 | AGGCTCCCCTTCTTCTTAGG | 58.114 | 55.000 | 0.00 | 0.00 | 38.74 | 2.69 |
2388 | 2434 | 1.366435 | AGGCTCCCCTTCTTCTTAGGA | 59.634 | 52.381 | 0.00 | 0.00 | 38.74 | 2.94 |
2389 | 2435 | 2.021540 | AGGCTCCCCTTCTTCTTAGGAT | 60.022 | 50.000 | 0.00 | 0.00 | 38.74 | 3.24 |
2390 | 2436 | 2.370519 | GGCTCCCCTTCTTCTTAGGATC | 59.629 | 54.545 | 0.00 | 0.00 | 34.56 | 3.36 |
2391 | 2437 | 3.313791 | GCTCCCCTTCTTCTTAGGATCT | 58.686 | 50.000 | 0.00 | 0.00 | 34.56 | 2.75 |
2467 | 2513 | 6.709018 | TGATCATTCTGATTGATGCACATT | 57.291 | 33.333 | 17.12 | 0.00 | 37.20 | 2.71 |
2488 | 2534 | 2.546368 | TGGCACATGTTTCAGTCGTAAC | 59.454 | 45.455 | 0.00 | 0.00 | 0.00 | 2.50 |
2526 | 2572 | 3.688694 | ATCGTACCAAGTTGTTAGCCA | 57.311 | 42.857 | 1.45 | 0.00 | 0.00 | 4.75 |
2582 | 2628 | 6.550854 | AGAAACAAGTTTGGATTTGGATCAGA | 59.449 | 34.615 | 2.45 | 0.00 | 31.56 | 3.27 |
2661 | 2707 | 3.955551 | TCGGTACTGTATCACAATGGCTA | 59.044 | 43.478 | 0.64 | 0.00 | 0.00 | 3.93 |
2665 | 2711 | 6.365247 | CGGTACTGTATCACAATGGCTATAAC | 59.635 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
2682 | 2728 | 7.119262 | TGGCTATAACTAGTGCTTCTTTTTGTC | 59.881 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
2696 | 2742 | 5.328691 | TCTTTTTGTCGTTGCAAGTAACTG | 58.671 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2698 | 2744 | 0.941542 | TGTCGTTGCAAGTAACTGGC | 59.058 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2706 | 2752 | 1.941668 | GCAAGTAACTGGCGCTCTTCT | 60.942 | 52.381 | 7.64 | 0.00 | 0.00 | 2.85 |
2707 | 2753 | 2.417719 | CAAGTAACTGGCGCTCTTCTT | 58.582 | 47.619 | 7.64 | 2.42 | 0.00 | 2.52 |
2752 | 2798 | 7.145985 | GCTGTTCTGTTCGGTCATTAGATATA | 58.854 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
2786 | 2832 | 1.606737 | CCTATAGCCTTGGCGCTCTTC | 60.607 | 57.143 | 7.64 | 0.00 | 40.39 | 2.87 |
3017 | 3063 | 3.513515 | GGGTAAGTTTTTCATGCCATGGA | 59.486 | 43.478 | 18.40 | 0.31 | 0.00 | 3.41 |
3064 | 3110 | 6.700352 | TCATTTCCTCCAAAATTTGTCCATC | 58.300 | 36.000 | 4.92 | 0.00 | 0.00 | 3.51 |
3390 | 3456 | 2.440147 | CCCCACCTGGACATGCAA | 59.560 | 61.111 | 0.00 | 0.00 | 37.39 | 4.08 |
3437 | 3503 | 4.503007 | CCAACTTATAACCATGACTCGACG | 59.497 | 45.833 | 0.00 | 0.00 | 0.00 | 5.12 |
3441 | 3507 | 1.705256 | TAACCATGACTCGACGCAAC | 58.295 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3463 | 3529 | 6.837471 | ACACAAACCTAACACCTAAAAACA | 57.163 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3466 | 3532 | 6.254804 | CACAAACCTAACACCTAAAAACAAGC | 59.745 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
3473 | 3539 | 7.650504 | CCTAACACCTAAAAACAAGCCTTTTAC | 59.349 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
3481 | 3547 | 2.084546 | ACAAGCCTTTTACATCTCGGC | 58.915 | 47.619 | 0.00 | 0.00 | 40.99 | 5.54 |
3491 | 3557 | 7.312899 | CCTTTTACATCTCGGCTTGTTTTATT | 58.687 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3500 | 3566 | 7.748847 | TCTCGGCTTGTTTTATTATTCTCAAC | 58.251 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
3503 | 3569 | 7.825270 | TCGGCTTGTTTTATTATTCTCAACCTA | 59.175 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
3525 | 3600 | 6.667848 | CCTAAAATGGACTTATTTTGGACCCT | 59.332 | 38.462 | 8.33 | 0.00 | 39.45 | 4.34 |
3571 | 3646 | 1.670971 | CGTCGGACGTGCATGTGTAC | 61.671 | 60.000 | 18.17 | 10.28 | 36.74 | 2.90 |
3577 | 3652 | 1.227999 | ACGTGCATGTGTACAGCCAC | 61.228 | 55.000 | 11.65 | 0.52 | 35.86 | 5.01 |
3598 | 3673 | 0.549902 | TGGATCCCATGGACACCACT | 60.550 | 55.000 | 15.22 | 0.00 | 36.88 | 4.00 |
3604 | 3679 | 0.609131 | CCATGGACACCACTTGGACC | 60.609 | 60.000 | 5.56 | 3.43 | 36.14 | 4.46 |
3612 | 3687 | 1.133792 | CACCACTTGGACCAAAGGAGT | 60.134 | 52.381 | 24.92 | 10.83 | 38.94 | 3.85 |
3624 | 3699 | 2.424601 | CCAAAGGAGTGCATGTGTATGG | 59.575 | 50.000 | 0.00 | 0.00 | 34.79 | 2.74 |
3660 | 3735 | 0.673022 | GCAAGAGTGACCAGCAGAGG | 60.673 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3726 | 3801 | 2.657237 | CTCCTGTCGGTGACACCC | 59.343 | 66.667 | 19.11 | 6.49 | 37.67 | 4.61 |
3738 | 3813 | 2.936032 | ACACCCTGCCTTCTCCCC | 60.936 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
4064 | 5777 | 4.789075 | CGACACGTGGCGGGTAGG | 62.789 | 72.222 | 35.70 | 6.62 | 46.20 | 3.18 |
4482 | 6464 | 1.686110 | GGTGGATCTCCTGGACCGT | 60.686 | 63.158 | 0.00 | 0.00 | 36.82 | 4.83 |
4505 | 6487 | 2.925706 | TTAGGTCCCGCAGCACCA | 60.926 | 61.111 | 3.34 | 0.00 | 34.80 | 4.17 |
4518 | 6509 | 2.923035 | CACCACGGACACCTCCCT | 60.923 | 66.667 | 0.00 | 0.00 | 31.93 | 4.20 |
4612 | 6629 | 2.741092 | GGAGGCGACAAGGTGACA | 59.259 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
4614 | 6631 | 1.666011 | GAGGCGACAAGGTGACAGA | 59.334 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
4628 | 6645 | 0.598562 | GACAGACAGCGGAAGAGACA | 59.401 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4692 | 6709 | 2.939460 | ACCAAATTGTTATGGCGCTC | 57.061 | 45.000 | 7.64 | 0.00 | 40.51 | 5.03 |
4926 | 6943 | 3.770933 | AGGCCCATTACGTACTCTAACAA | 59.229 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
4928 | 6945 | 5.104652 | AGGCCCATTACGTACTCTAACAATT | 60.105 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4958 | 6975 | 3.133464 | TGCAGCTATGTTGCGCCC | 61.133 | 61.111 | 4.18 | 0.00 | 42.53 | 6.13 |
5093 | 7110 | 7.820648 | CAAGTGAGGTAATACTTGCAAAATCT | 58.179 | 34.615 | 0.00 | 0.00 | 44.81 | 2.40 |
5142 | 7217 | 9.434420 | CTAATTGTTGTCTTCATCTCTTCTCTT | 57.566 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
5153 | 7228 | 5.946377 | TCATCTCTTCTCTTACACACTGCTA | 59.054 | 40.000 | 0.00 | 0.00 | 0.00 | 3.49 |
5162 | 7237 | 6.980978 | TCTCTTACACACTGCTATTGCTATTC | 59.019 | 38.462 | 0.00 | 0.00 | 40.48 | 1.75 |
5165 | 7240 | 3.618594 | ACACACTGCTATTGCTATTCACG | 59.381 | 43.478 | 0.00 | 0.00 | 40.48 | 4.35 |
5215 | 7290 | 1.374252 | GATGGTCGCCAACAGACGT | 60.374 | 57.895 | 2.68 | 0.00 | 36.95 | 4.34 |
5254 | 7329 | 1.337260 | CCACACCTTGAGAGAAGACCG | 60.337 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
5266 | 7341 | 1.269998 | AGAAGACCGTCGACAAAGGAG | 59.730 | 52.381 | 17.16 | 0.00 | 0.00 | 3.69 |
5305 | 7380 | 0.867753 | CAGCTCTGCGGTGTATCGAC | 60.868 | 60.000 | 0.00 | 0.00 | 36.39 | 4.20 |
5314 | 7389 | 1.209128 | GGTGTATCGACCTGAATGCG | 58.791 | 55.000 | 0.00 | 0.00 | 32.69 | 4.73 |
5359 | 7434 | 0.177141 | TCGTCCGGATGTTGGATTCC | 59.823 | 55.000 | 22.88 | 0.00 | 37.93 | 3.01 |
5438 | 7513 | 9.265862 | TGATTATTGGTTTACCTGGAAATCATT | 57.734 | 29.630 | 0.00 | 3.17 | 36.82 | 2.57 |
5459 | 7534 | 7.765307 | TCATTCATTTTCCTGCTACTTTCATC | 58.235 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
5481 | 7556 | 6.698008 | TCCATTGTATGATCAATTGGTCAC | 57.302 | 37.500 | 23.35 | 12.40 | 36.10 | 3.67 |
5491 | 7566 | 3.402110 | TCAATTGGTCACTGCACAGTAG | 58.598 | 45.455 | 5.42 | 0.00 | 40.20 | 2.57 |
5493 | 7568 | 2.820059 | TTGGTCACTGCACAGTAGAG | 57.180 | 50.000 | 2.38 | 0.00 | 40.20 | 2.43 |
5494 | 7569 | 1.704641 | TGGTCACTGCACAGTAGAGT | 58.295 | 50.000 | 2.38 | 0.00 | 40.20 | 3.24 |
5495 | 7570 | 2.871453 | TGGTCACTGCACAGTAGAGTA | 58.129 | 47.619 | 2.38 | 0.00 | 40.20 | 2.59 |
5497 | 7572 | 4.595986 | TGGTCACTGCACAGTAGAGTATA | 58.404 | 43.478 | 2.38 | 0.00 | 40.20 | 1.47 |
5498 | 7573 | 4.398358 | TGGTCACTGCACAGTAGAGTATAC | 59.602 | 45.833 | 2.38 | 0.00 | 40.20 | 1.47 |
5528 | 7627 | 9.125026 | CCATCTTATTTGGTTATCCTATATGCC | 57.875 | 37.037 | 0.00 | 0.00 | 34.23 | 4.40 |
5535 | 7634 | 6.114187 | TGGTTATCCTATATGCCTGTTCTG | 57.886 | 41.667 | 0.00 | 0.00 | 34.23 | 3.02 |
5536 | 7635 | 5.606749 | TGGTTATCCTATATGCCTGTTCTGT | 59.393 | 40.000 | 0.00 | 0.00 | 34.23 | 3.41 |
5573 | 7672 | 6.109359 | GCTTAGAGAGGATTGTTTAGCTTGA | 58.891 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5574 | 7673 | 6.036626 | GCTTAGAGAGGATTGTTTAGCTTGAC | 59.963 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
5601 | 7706 | 5.947566 | TGATGCTTATTGCCTACATATGCAT | 59.052 | 36.000 | 3.79 | 3.79 | 41.34 | 3.96 |
5602 | 7707 | 5.885230 | TGCTTATTGCCTACATATGCATC | 57.115 | 39.130 | 0.19 | 0.00 | 42.00 | 3.91 |
5644 | 7749 | 3.228188 | AGTGACTGGATTTGCAGGAAA | 57.772 | 42.857 | 4.07 | 0.00 | 0.00 | 3.13 |
5667 | 7772 | 0.813184 | GACCACGACAGAACCGGATA | 59.187 | 55.000 | 9.46 | 0.00 | 0.00 | 2.59 |
5762 | 7867 | 2.046217 | GCCCCCTCGGTCAAAGAC | 60.046 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
5794 | 7899 | 6.554334 | TTTCGTCCAAATGAGGTAAAGAAG | 57.446 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
5795 | 7900 | 5.477607 | TCGTCCAAATGAGGTAAAGAAGA | 57.522 | 39.130 | 0.00 | 0.00 | 0.00 | 2.87 |
5796 | 7901 | 5.479306 | TCGTCCAAATGAGGTAAAGAAGAG | 58.521 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
5798 | 7903 | 5.932303 | CGTCCAAATGAGGTAAAGAAGAGAA | 59.068 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5800 | 7905 | 6.937465 | GTCCAAATGAGGTAAAGAAGAGAAGT | 59.063 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
5803 | 7908 | 9.284968 | CCAAATGAGGTAAAGAAGAGAAGTAAA | 57.715 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
5839 | 7950 | 8.674173 | TGGAGATGTAAAGATAGAGAGATACCT | 58.326 | 37.037 | 0.00 | 0.00 | 0.00 | 3.08 |
5843 | 7954 | 6.062749 | TGTAAAGATAGAGAGATACCTGCGT | 58.937 | 40.000 | 0.00 | 0.00 | 0.00 | 5.24 |
5850 | 7961 | 1.146358 | GAGATACCTGCGTGCGGAAC | 61.146 | 60.000 | 1.35 | 0.00 | 0.00 | 3.62 |
5990 | 8101 | 1.204941 | GACGGCTCAAGGATGTACAGT | 59.795 | 52.381 | 0.33 | 0.00 | 0.00 | 3.55 |
5993 | 8104 | 2.427453 | CGGCTCAAGGATGTACAGTACT | 59.573 | 50.000 | 12.07 | 0.00 | 0.00 | 2.73 |
5994 | 8105 | 3.630769 | CGGCTCAAGGATGTACAGTACTA | 59.369 | 47.826 | 12.07 | 0.00 | 0.00 | 1.82 |
5995 | 8106 | 4.261238 | CGGCTCAAGGATGTACAGTACTAG | 60.261 | 50.000 | 12.07 | 0.00 | 0.00 | 2.57 |
6015 | 8126 | 3.660865 | AGTAGCTTGTAAAACGGTCTGG | 58.339 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
6110 | 8224 | 7.805071 | CACACCAAGAGTATAAAGCAAAGAAAG | 59.195 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
6155 | 8276 | 3.006940 | GGTTGTCAGTGTGTGTTTCTGA | 58.993 | 45.455 | 0.00 | 0.00 | 36.12 | 3.27 |
6156 | 8277 | 3.627577 | GGTTGTCAGTGTGTGTTTCTGAT | 59.372 | 43.478 | 0.00 | 0.00 | 39.77 | 2.90 |
6171 | 8292 | 7.282901 | TGTGTTTCTGATGTCTGAATCTGAAAA | 59.717 | 33.333 | 21.41 | 15.03 | 46.76 | 2.29 |
6172 | 8293 | 8.131100 | GTGTTTCTGATGTCTGAATCTGAAAAA | 58.869 | 33.333 | 21.41 | 17.78 | 46.76 | 1.94 |
6173 | 8294 | 8.347771 | TGTTTCTGATGTCTGAATCTGAAAAAG | 58.652 | 33.333 | 21.41 | 0.00 | 46.76 | 2.27 |
6175 | 8296 | 8.455903 | TTCTGATGTCTGAATCTGAAAAAGTT | 57.544 | 30.769 | 13.89 | 0.00 | 39.86 | 2.66 |
6176 | 8297 | 8.455903 | TCTGATGTCTGAATCTGAAAAAGTTT | 57.544 | 30.769 | 0.00 | 0.00 | 33.23 | 2.66 |
6177 | 8298 | 9.559732 | TCTGATGTCTGAATCTGAAAAAGTTTA | 57.440 | 29.630 | 0.00 | 0.00 | 33.23 | 2.01 |
6180 | 8301 | 9.780413 | GATGTCTGAATCTGAAAAAGTTTATCC | 57.220 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
6181 | 8302 | 8.924511 | TGTCTGAATCTGAAAAAGTTTATCCT | 57.075 | 30.769 | 0.00 | 0.00 | 0.00 | 3.24 |
6182 | 8303 | 9.354673 | TGTCTGAATCTGAAAAAGTTTATCCTT | 57.645 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
6204 | 8579 | 9.868160 | TCCTTAGAATAGAGAGTGATGTATCAA | 57.132 | 33.333 | 0.00 | 0.00 | 38.75 | 2.57 |
6227 | 8602 | 9.354673 | TCAAGTAAAGGAAGAATTCTTGTCATT | 57.645 | 29.630 | 25.12 | 12.73 | 46.56 | 2.57 |
6261 | 8639 | 6.923012 | TCATTGTTTGTGACCAATAAGGATG | 58.077 | 36.000 | 0.00 | 0.00 | 41.22 | 3.51 |
6293 | 8671 | 6.494893 | TCTGAAGTTAAAATGATTCCGTGG | 57.505 | 37.500 | 0.00 | 0.00 | 0.00 | 4.94 |
6307 | 8685 | 2.766313 | TCCGTGGTTGTTTCAGAGATG | 58.234 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
6325 | 8703 | 9.647918 | TCAGAGATGAAATGATTACTAGTACCT | 57.352 | 33.333 | 0.91 | 0.00 | 0.00 | 3.08 |
6326 | 8704 | 9.906660 | CAGAGATGAAATGATTACTAGTACCTC | 57.093 | 37.037 | 0.91 | 3.57 | 0.00 | 3.85 |
6328 | 8706 | 7.887381 | AGATGAAATGATTACTAGTACCTCCG | 58.113 | 38.462 | 0.91 | 0.00 | 0.00 | 4.63 |
6329 | 8707 | 7.506261 | AGATGAAATGATTACTAGTACCTCCGT | 59.494 | 37.037 | 0.91 | 0.00 | 0.00 | 4.69 |
6330 | 8708 | 7.414222 | TGAAATGATTACTAGTACCTCCGTT | 57.586 | 36.000 | 0.91 | 0.44 | 0.00 | 4.44 |
6350 | 8771 | 6.207221 | TCCGTTTTGGTTTATTAGTCCCTTTC | 59.793 | 38.462 | 0.00 | 0.00 | 39.52 | 2.62 |
6361 | 8782 | 8.851541 | TTATTAGTCCCTTTCGTATTTTGTGT | 57.148 | 30.769 | 0.00 | 0.00 | 0.00 | 3.72 |
6370 | 8791 | 9.733219 | CCCTTTCGTATTTTGTGTTAAACTTTA | 57.267 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
6430 | 8851 | 8.682710 | TGCTACAAAATTACATTGGTAGATTCC | 58.317 | 33.333 | 5.91 | 0.00 | 35.03 | 3.01 |
6526 | 8951 | 8.301002 | TCTAAAAATTTGACCCAAAATACGAGG | 58.699 | 33.333 | 0.00 | 0.00 | 36.90 | 4.63 |
6534 | 8959 | 4.432980 | CCCAAAATACGAGGGGACTAAT | 57.567 | 45.455 | 0.00 | 0.00 | 44.43 | 1.73 |
6548 | 8973 | 3.117776 | GGGACTAATAAACCCGGGTGAAT | 60.118 | 47.826 | 31.05 | 21.05 | 34.03 | 2.57 |
6549 | 8974 | 3.881089 | GGACTAATAAACCCGGGTGAATG | 59.119 | 47.826 | 31.05 | 17.59 | 0.00 | 2.67 |
6556 | 8981 | 1.941377 | ACCCGGGTGAATGTAGTACA | 58.059 | 50.000 | 29.69 | 5.24 | 0.00 | 2.90 |
6557 | 8982 | 1.829222 | ACCCGGGTGAATGTAGTACAG | 59.171 | 52.381 | 29.69 | 0.00 | 0.00 | 2.74 |
6559 | 8984 | 3.025978 | CCCGGGTGAATGTAGTACAGTA | 58.974 | 50.000 | 14.18 | 0.00 | 0.00 | 2.74 |
6560 | 8985 | 3.181483 | CCCGGGTGAATGTAGTACAGTAC | 60.181 | 52.174 | 14.18 | 2.05 | 0.00 | 2.73 |
6561 | 8986 | 3.181483 | CCGGGTGAATGTAGTACAGTACC | 60.181 | 52.174 | 18.27 | 18.27 | 32.16 | 3.34 |
6563 | 8988 | 4.439700 | CGGGTGAATGTAGTACAGTACCTG | 60.440 | 50.000 | 22.42 | 20.99 | 37.52 | 4.00 |
6564 | 8989 | 4.430908 | GGTGAATGTAGTACAGTACCTGC | 58.569 | 47.826 | 18.82 | 3.71 | 34.37 | 4.85 |
6570 | 9016 | 5.130292 | TGTAGTACAGTACCTGCAAAGAC | 57.870 | 43.478 | 7.13 | 0.00 | 34.37 | 3.01 |
6603 | 9049 | 5.684704 | TCTGTCACAAGTCTTTCAGGATTT | 58.315 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
6648 | 9094 | 9.925268 | TTCAAAGAAACGTGTTTTTATCTACTC | 57.075 | 29.630 | 0.00 | 0.00 | 32.11 | 2.59 |
6649 | 9095 | 8.553696 | TCAAAGAAACGTGTTTTTATCTACTCC | 58.446 | 33.333 | 0.00 | 0.00 | 32.11 | 3.85 |
6650 | 9096 | 7.430992 | AAGAAACGTGTTTTTATCTACTCCC | 57.569 | 36.000 | 0.00 | 0.00 | 32.11 | 4.30 |
6651 | 9097 | 6.766429 | AGAAACGTGTTTTTATCTACTCCCT | 58.234 | 36.000 | 0.00 | 0.00 | 32.11 | 4.20 |
6652 | 9098 | 6.872547 | AGAAACGTGTTTTTATCTACTCCCTC | 59.127 | 38.462 | 0.00 | 0.00 | 32.11 | 4.30 |
6653 | 9099 | 5.082251 | ACGTGTTTTTATCTACTCCCTCC | 57.918 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
6654 | 9100 | 4.110482 | CGTGTTTTTATCTACTCCCTCCG | 58.890 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
6655 | 9101 | 4.381292 | CGTGTTTTTATCTACTCCCTCCGT | 60.381 | 45.833 | 0.00 | 0.00 | 0.00 | 4.69 |
6656 | 9102 | 5.485620 | GTGTTTTTATCTACTCCCTCCGTT | 58.514 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
6657 | 9103 | 5.936372 | GTGTTTTTATCTACTCCCTCCGTTT | 59.064 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
6658 | 9104 | 6.091849 | GTGTTTTTATCTACTCCCTCCGTTTC | 59.908 | 42.308 | 0.00 | 0.00 | 0.00 | 2.78 |
6659 | 9105 | 6.168389 | GTTTTTATCTACTCCCTCCGTTTCA | 58.832 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
6660 | 9106 | 6.363167 | TTTTATCTACTCCCTCCGTTTCAA | 57.637 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
6661 | 9107 | 6.363167 | TTTATCTACTCCCTCCGTTTCAAA | 57.637 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
6662 | 9108 | 6.555463 | TTATCTACTCCCTCCGTTTCAAAT | 57.445 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
6663 | 9109 | 4.903045 | TCTACTCCCTCCGTTTCAAATT | 57.097 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
6664 | 9110 | 6.555463 | ATCTACTCCCTCCGTTTCAAATTA | 57.445 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
6665 | 9111 | 5.727434 | TCTACTCCCTCCGTTTCAAATTAC | 58.273 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
6666 | 9112 | 4.635699 | ACTCCCTCCGTTTCAAATTACT | 57.364 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
6667 | 9113 | 4.576879 | ACTCCCTCCGTTTCAAATTACTC | 58.423 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
6668 | 9114 | 3.592059 | TCCCTCCGTTTCAAATTACTCG | 58.408 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
6669 | 9115 | 3.007182 | TCCCTCCGTTTCAAATTACTCGT | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
6670 | 9116 | 3.370061 | CCCTCCGTTTCAAATTACTCGTC | 59.630 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
6671 | 9117 | 3.060363 | CCTCCGTTTCAAATTACTCGTCG | 59.940 | 47.826 | 0.00 | 0.00 | 0.00 | 5.12 |
6672 | 9118 | 2.409378 | TCCGTTTCAAATTACTCGTCGC | 59.591 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
6673 | 9119 | 2.410730 | CCGTTTCAAATTACTCGTCGCT | 59.589 | 45.455 | 0.00 | 0.00 | 0.00 | 4.93 |
6674 | 9120 | 3.609373 | CCGTTTCAAATTACTCGTCGCTA | 59.391 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
6675 | 9121 | 4.090354 | CCGTTTCAAATTACTCGTCGCTAA | 59.910 | 41.667 | 0.00 | 0.00 | 0.00 | 3.09 |
6676 | 9122 | 5.388682 | CCGTTTCAAATTACTCGTCGCTAAA | 60.389 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
6677 | 9123 | 6.066410 | CGTTTCAAATTACTCGTCGCTAAAA | 58.934 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
6678 | 9124 | 6.735063 | CGTTTCAAATTACTCGTCGCTAAAAT | 59.265 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
6679 | 9125 | 7.252543 | CGTTTCAAATTACTCGTCGCTAAAATG | 60.253 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
6680 | 9126 | 6.102006 | TCAAATTACTCGTCGCTAAAATGG | 57.898 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
6681 | 9127 | 5.870433 | TCAAATTACTCGTCGCTAAAATGGA | 59.130 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6682 | 9128 | 6.537301 | TCAAATTACTCGTCGCTAAAATGGAT | 59.463 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
6683 | 9129 | 5.907197 | ATTACTCGTCGCTAAAATGGATG | 57.093 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
6684 | 9130 | 3.247006 | ACTCGTCGCTAAAATGGATGT | 57.753 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
6685 | 9131 | 4.380841 | ACTCGTCGCTAAAATGGATGTA | 57.619 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
6686 | 9132 | 4.945246 | ACTCGTCGCTAAAATGGATGTAT | 58.055 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
6687 | 9133 | 4.982916 | ACTCGTCGCTAAAATGGATGTATC | 59.017 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
6688 | 9134 | 5.196341 | TCGTCGCTAAAATGGATGTATCT | 57.804 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
6689 | 9135 | 6.016527 | ACTCGTCGCTAAAATGGATGTATCTA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
6690 | 9136 | 6.379386 | TCGTCGCTAAAATGGATGTATCTAG | 58.621 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
6691 | 9137 | 6.206048 | TCGTCGCTAAAATGGATGTATCTAGA | 59.794 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
6692 | 9138 | 6.861572 | CGTCGCTAAAATGGATGTATCTAGAA | 59.138 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
6693 | 9139 | 7.061210 | CGTCGCTAAAATGGATGTATCTAGAAG | 59.939 | 40.741 | 0.00 | 0.00 | 0.00 | 2.85 |
6694 | 9140 | 7.868415 | GTCGCTAAAATGGATGTATCTAGAAGT | 59.132 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
6695 | 9141 | 9.074576 | TCGCTAAAATGGATGTATCTAGAAGTA | 57.925 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
6696 | 9142 | 9.692749 | CGCTAAAATGGATGTATCTAGAAGTAA | 57.307 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
6726 | 9172 | 9.880064 | ACATCTATATATATTCATACGTGCGAC | 57.120 | 33.333 | 0.00 | 0.00 | 0.00 | 5.19 |
6727 | 9173 | 9.878599 | CATCTATATATATTCATACGTGCGACA | 57.121 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
6729 | 9175 | 9.931210 | TCTATATATATTCATACGTGCGACAAG | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
6730 | 9176 | 9.717892 | CTATATATATTCATACGTGCGACAAGT | 57.282 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
6733 | 9179 | 8.981724 | ATATATTCATACGTGCGACAAGTAAT | 57.018 | 30.769 | 0.00 | 4.62 | 32.82 | 1.89 |
6734 | 9180 | 7.709269 | ATATTCATACGTGCGACAAGTAATT | 57.291 | 32.000 | 0.00 | 0.00 | 32.82 | 1.40 |
6735 | 9181 | 5.849357 | TTCATACGTGCGACAAGTAATTT | 57.151 | 34.783 | 0.00 | 0.00 | 32.82 | 1.82 |
6736 | 9182 | 5.198116 | TCATACGTGCGACAAGTAATTTG | 57.802 | 39.130 | 0.00 | 4.97 | 42.68 | 2.32 |
6737 | 9183 | 2.961522 | ACGTGCGACAAGTAATTTGG | 57.038 | 45.000 | 0.00 | 0.00 | 41.25 | 3.28 |
6738 | 9184 | 2.485903 | ACGTGCGACAAGTAATTTGGA | 58.514 | 42.857 | 0.00 | 0.00 | 41.25 | 3.53 |
6739 | 9185 | 2.873472 | ACGTGCGACAAGTAATTTGGAA | 59.127 | 40.909 | 0.00 | 0.00 | 41.25 | 3.53 |
6740 | 9186 | 3.223157 | CGTGCGACAAGTAATTTGGAAC | 58.777 | 45.455 | 0.00 | 0.00 | 41.25 | 3.62 |
6741 | 9187 | 3.223157 | GTGCGACAAGTAATTTGGAACG | 58.777 | 45.455 | 0.00 | 0.00 | 41.25 | 3.95 |
6742 | 9188 | 2.224549 | TGCGACAAGTAATTTGGAACGG | 59.775 | 45.455 | 0.00 | 0.00 | 41.25 | 4.44 |
6743 | 9189 | 2.481185 | GCGACAAGTAATTTGGAACGGA | 59.519 | 45.455 | 0.00 | 0.00 | 41.25 | 4.69 |
6744 | 9190 | 3.424433 | GCGACAAGTAATTTGGAACGGAG | 60.424 | 47.826 | 0.00 | 0.00 | 41.25 | 4.63 |
6745 | 9191 | 3.124636 | CGACAAGTAATTTGGAACGGAGG | 59.875 | 47.826 | 0.00 | 0.00 | 41.25 | 4.30 |
6746 | 9192 | 3.418047 | ACAAGTAATTTGGAACGGAGGG | 58.582 | 45.455 | 0.00 | 0.00 | 41.25 | 4.30 |
6747 | 9193 | 3.073356 | ACAAGTAATTTGGAACGGAGGGA | 59.927 | 43.478 | 0.00 | 0.00 | 41.25 | 4.20 |
6748 | 9194 | 3.629142 | AGTAATTTGGAACGGAGGGAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
6749 | 9195 | 2.910977 | AGTAATTTGGAACGGAGGGAGT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
6750 | 9196 | 4.098894 | AGTAATTTGGAACGGAGGGAGTA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
6751 | 9197 | 3.345508 | AATTTGGAACGGAGGGAGTAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
6752 | 9198 | 1.719529 | TTTGGAACGGAGGGAGTACA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
6753 | 9199 | 1.719529 | TTGGAACGGAGGGAGTACAA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
6754 | 9200 | 1.719529 | TGGAACGGAGGGAGTACAAA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6755 | 9201 | 2.262637 | TGGAACGGAGGGAGTACAAAT | 58.737 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
6756 | 9202 | 3.443052 | TGGAACGGAGGGAGTACAAATA | 58.557 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
6757 | 9203 | 3.196254 | TGGAACGGAGGGAGTACAAATAC | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 1.89 |
6758 | 9204 | 3.450096 | GGAACGGAGGGAGTACAAATACT | 59.550 | 47.826 | 0.00 | 0.00 | 44.74 | 2.12 |
6759 | 9205 | 4.646492 | GGAACGGAGGGAGTACAAATACTA | 59.354 | 45.833 | 0.00 | 0.00 | 41.98 | 1.82 |
6760 | 9206 | 5.221204 | GGAACGGAGGGAGTACAAATACTAG | 60.221 | 48.000 | 0.00 | 0.00 | 41.98 | 2.57 |
6761 | 9207 | 5.121380 | ACGGAGGGAGTACAAATACTAGA | 57.879 | 43.478 | 0.00 | 0.00 | 41.98 | 2.43 |
6762 | 9208 | 5.513233 | ACGGAGGGAGTACAAATACTAGAA | 58.487 | 41.667 | 0.00 | 0.00 | 41.98 | 2.10 |
6763 | 9209 | 5.954150 | ACGGAGGGAGTACAAATACTAGAAA | 59.046 | 40.000 | 0.00 | 0.00 | 41.98 | 2.52 |
6764 | 9210 | 6.096564 | ACGGAGGGAGTACAAATACTAGAAAG | 59.903 | 42.308 | 0.00 | 0.00 | 41.98 | 2.62 |
6765 | 9211 | 6.461231 | CGGAGGGAGTACAAATACTAGAAAGG | 60.461 | 46.154 | 0.00 | 0.00 | 41.98 | 3.11 |
6766 | 9212 | 6.610425 | GGAGGGAGTACAAATACTAGAAAGGA | 59.390 | 42.308 | 0.00 | 0.00 | 41.98 | 3.36 |
6767 | 9213 | 7.290481 | GGAGGGAGTACAAATACTAGAAAGGAT | 59.710 | 40.741 | 0.00 | 0.00 | 41.98 | 3.24 |
6768 | 9214 | 8.252624 | AGGGAGTACAAATACTAGAAAGGATC | 57.747 | 38.462 | 0.00 | 0.00 | 41.98 | 3.36 |
6769 | 9215 | 7.290481 | AGGGAGTACAAATACTAGAAAGGATCC | 59.710 | 40.741 | 2.48 | 2.48 | 41.98 | 3.36 |
6770 | 9216 | 7.070821 | GGGAGTACAAATACTAGAAAGGATCCA | 59.929 | 40.741 | 15.82 | 0.00 | 41.98 | 3.41 |
6771 | 9217 | 8.652290 | GGAGTACAAATACTAGAAAGGATCCAT | 58.348 | 37.037 | 15.82 | 0.00 | 41.98 | 3.41 |
6775 | 9221 | 8.000780 | ACAAATACTAGAAAGGATCCATTTGC | 57.999 | 34.615 | 21.13 | 6.69 | 36.21 | 3.68 |
6776 | 9222 | 7.068716 | ACAAATACTAGAAAGGATCCATTTGCC | 59.931 | 37.037 | 21.13 | 4.81 | 36.21 | 4.52 |
6777 | 9223 | 4.591321 | ACTAGAAAGGATCCATTTGCCA | 57.409 | 40.909 | 15.82 | 0.00 | 0.00 | 4.92 |
6778 | 9224 | 4.273318 | ACTAGAAAGGATCCATTTGCCAC | 58.727 | 43.478 | 15.82 | 0.00 | 0.00 | 5.01 |
6779 | 9225 | 3.463048 | AGAAAGGATCCATTTGCCACT | 57.537 | 42.857 | 15.82 | 0.00 | 0.00 | 4.00 |
6780 | 9226 | 4.591321 | AGAAAGGATCCATTTGCCACTA | 57.409 | 40.909 | 15.82 | 0.00 | 0.00 | 2.74 |
6781 | 9227 | 4.530875 | AGAAAGGATCCATTTGCCACTAG | 58.469 | 43.478 | 15.82 | 0.00 | 0.00 | 2.57 |
6782 | 9228 | 4.228210 | AGAAAGGATCCATTTGCCACTAGA | 59.772 | 41.667 | 15.82 | 0.00 | 0.00 | 2.43 |
6783 | 9229 | 3.567478 | AGGATCCATTTGCCACTAGAC | 57.433 | 47.619 | 15.82 | 0.00 | 0.00 | 2.59 |
6784 | 9230 | 3.118531 | AGGATCCATTTGCCACTAGACT | 58.881 | 45.455 | 15.82 | 0.00 | 0.00 | 3.24 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
40 | 41 | 3.245875 | GGGAATTGGATGGATGGATGGAT | 60.246 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
41 | 42 | 2.110543 | GGGAATTGGATGGATGGATGGA | 59.889 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
42 | 43 | 2.532843 | GGGAATTGGATGGATGGATGG | 58.467 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
43 | 44 | 2.111255 | AGGGGAATTGGATGGATGGATG | 59.889 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
59 | 60 | 1.229853 | GAAGAGGGGGTGAAGGGGA | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
68 | 69 | 1.147153 | GCATTCCGAGAAGAGGGGG | 59.853 | 63.158 | 0.00 | 0.00 | 0.00 | 5.40 |
93 | 99 | 2.037251 | TGAGATCCAGTTATTAGCCGGC | 59.963 | 50.000 | 21.89 | 21.89 | 0.00 | 6.13 |
94 | 100 | 3.322254 | AGTGAGATCCAGTTATTAGCCGG | 59.678 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
165 | 186 | 1.348250 | GCGAAATCGAATCAGCGCA | 59.652 | 52.632 | 11.47 | 0.00 | 43.45 | 6.09 |
186 | 207 | 3.191371 | GTGTTTGTAGCCTGAAATCTGGG | 59.809 | 47.826 | 8.23 | 0.00 | 35.73 | 4.45 |
208 | 229 | 9.018582 | ACCTGGAGAGAAGAATGAAATAAAAAG | 57.981 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
232 | 253 | 8.443953 | ACTTATAAATCTGATGAAGAGCAACC | 57.556 | 34.615 | 0.00 | 0.00 | 38.67 | 3.77 |
257 | 278 | 8.032451 | GCATCCTAAATGCCAAAGTTAACTAAA | 58.968 | 33.333 | 8.92 | 0.00 | 39.01 | 1.85 |
260 | 281 | 5.716703 | AGCATCCTAAATGCCAAAGTTAACT | 59.283 | 36.000 | 1.12 | 1.12 | 45.59 | 2.24 |
263 | 284 | 5.299279 | GCTAGCATCCTAAATGCCAAAGTTA | 59.701 | 40.000 | 10.63 | 0.00 | 45.59 | 2.24 |
294 | 315 | 0.928229 | GGGCGCAAGATTACTACGTG | 59.072 | 55.000 | 10.83 | 0.00 | 43.02 | 4.49 |
295 | 316 | 0.179092 | GGGGCGCAAGATTACTACGT | 60.179 | 55.000 | 10.83 | 0.00 | 43.02 | 3.57 |
296 | 317 | 0.104304 | AGGGGCGCAAGATTACTACG | 59.896 | 55.000 | 10.83 | 0.00 | 43.02 | 3.51 |
297 | 318 | 2.158943 | AGAAGGGGCGCAAGATTACTAC | 60.159 | 50.000 | 10.83 | 0.00 | 43.02 | 2.73 |
345 | 366 | 3.188786 | CCGACAACGCAGCTAGCC | 61.189 | 66.667 | 12.13 | 0.00 | 41.38 | 3.93 |
369 | 390 | 1.068434 | ACAGAAAATTGGGCACGGTTG | 59.932 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
398 | 419 | 6.537453 | ACCACATATAGATGTAGCATCTCC | 57.463 | 41.667 | 14.05 | 0.00 | 44.82 | 3.71 |
445 | 469 | 4.922206 | AGTAGAAATTGAACATCAGGCCA | 58.078 | 39.130 | 5.01 | 0.00 | 0.00 | 5.36 |
477 | 501 | 2.596452 | CGATGCGTTTCACACTAGAGT | 58.404 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
553 | 589 | 7.413109 | GCTTACTGGCTGTTGAGAATTAAGTAC | 60.413 | 40.741 | 1.31 | 0.00 | 0.00 | 2.73 |
623 | 659 | 2.161855 | GACATGTGGCCAAGATCAACA | 58.838 | 47.619 | 7.24 | 0.00 | 0.00 | 3.33 |
624 | 660 | 2.095059 | GTGACATGTGGCCAAGATCAAC | 60.095 | 50.000 | 7.24 | 0.00 | 0.00 | 3.18 |
678 | 714 | 0.025513 | GCGCACGAATGTAGCTTCAG | 59.974 | 55.000 | 0.30 | 0.00 | 0.00 | 3.02 |
840 | 883 | 4.682778 | TCCCACGGAGATAATAAACCTG | 57.317 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
863 | 906 | 2.529151 | CGTTTCAAACTGTTTGCAGCT | 58.471 | 42.857 | 24.62 | 0.00 | 46.30 | 4.24 |
883 | 926 | 5.992217 | GGTCTGTGGACACTTAATATCATCC | 59.008 | 44.000 | 3.91 | 0.00 | 43.77 | 3.51 |
909 | 952 | 8.197439 | ACTTGCCTATATTAACTTGATTTTGCC | 58.803 | 33.333 | 0.00 | 0.00 | 0.00 | 4.52 |
1023 | 1066 | 6.744537 | CGATTGTTTTCTCATGAAGTGATTCC | 59.255 | 38.462 | 0.00 | 0.00 | 35.97 | 3.01 |
1326 | 1369 | 1.741401 | CTCCTGCGCCGATTGAACA | 60.741 | 57.895 | 4.18 | 0.00 | 0.00 | 3.18 |
1482 | 1525 | 5.605488 | TCCAAGGTAAGAAAACTCAGGTAGT | 59.395 | 40.000 | 0.00 | 0.00 | 41.49 | 2.73 |
1690 | 1733 | 9.912634 | CACAATAAACTCATAGACAACCATTTT | 57.087 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1706 | 1749 | 6.534793 | CAGCCAAAAAGTCAACACAATAAACT | 59.465 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
1751 | 1794 | 5.678107 | GCAATTCTTGTATGAGCAGAAAGGG | 60.678 | 44.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2202 | 2248 | 3.643595 | TACATGCACTGGGGCTGCC | 62.644 | 63.158 | 11.05 | 11.05 | 33.36 | 4.85 |
2203 | 2249 | 2.045045 | TACATGCACTGGGGCTGC | 60.045 | 61.111 | 0.00 | 0.00 | 35.03 | 5.25 |
2204 | 2250 | 2.117156 | GCTACATGCACTGGGGCTG | 61.117 | 63.158 | 0.00 | 0.00 | 42.31 | 4.85 |
2205 | 2251 | 2.262774 | GAGCTACATGCACTGGGGCT | 62.263 | 60.000 | 13.29 | 13.29 | 45.94 | 5.19 |
2206 | 2252 | 1.821332 | GAGCTACATGCACTGGGGC | 60.821 | 63.158 | 0.00 | 0.00 | 45.94 | 5.80 |
2207 | 2253 | 1.153086 | GGAGCTACATGCACTGGGG | 60.153 | 63.158 | 0.00 | 0.00 | 45.94 | 4.96 |
2208 | 2254 | 1.153086 | GGGAGCTACATGCACTGGG | 60.153 | 63.158 | 0.00 | 0.00 | 45.94 | 4.45 |
2209 | 2255 | 1.522355 | CGGGAGCTACATGCACTGG | 60.522 | 63.158 | 0.00 | 0.00 | 45.94 | 4.00 |
2210 | 2256 | 4.115279 | CGGGAGCTACATGCACTG | 57.885 | 61.111 | 0.00 | 0.00 | 45.94 | 3.66 |
2231 | 2277 | 4.785453 | CTTCCCCAGACCCTGCGC | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 6.09 |
2232 | 2278 | 4.101448 | CCTTCCCCAGACCCTGCG | 62.101 | 72.222 | 0.00 | 0.00 | 0.00 | 5.18 |
2233 | 2279 | 3.732849 | CCCTTCCCCAGACCCTGC | 61.733 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
2234 | 2280 | 2.204151 | ACCCTTCCCCAGACCCTG | 60.204 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
2235 | 2281 | 2.125225 | GACCCTTCCCCAGACCCT | 59.875 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
2236 | 2282 | 3.015753 | GGACCCTTCCCCAGACCC | 61.016 | 72.222 | 0.00 | 0.00 | 35.57 | 4.46 |
2237 | 2283 | 3.400054 | CGGACCCTTCCCCAGACC | 61.400 | 72.222 | 0.00 | 0.00 | 38.99 | 3.85 |
2238 | 2284 | 2.284405 | TCGGACCCTTCCCCAGAC | 60.284 | 66.667 | 0.00 | 0.00 | 38.99 | 3.51 |
2239 | 2285 | 2.284405 | GTCGGACCCTTCCCCAGA | 60.284 | 66.667 | 0.00 | 0.00 | 38.99 | 3.86 |
2240 | 2286 | 3.400054 | GGTCGGACCCTTCCCCAG | 61.400 | 72.222 | 16.55 | 0.00 | 38.99 | 4.45 |
2241 | 2287 | 3.918328 | GAGGTCGGACCCTTCCCCA | 62.918 | 68.421 | 23.21 | 0.00 | 39.75 | 4.96 |
2242 | 2288 | 3.082055 | GAGGTCGGACCCTTCCCC | 61.082 | 72.222 | 23.21 | 2.97 | 39.75 | 4.81 |
2243 | 2289 | 1.199425 | AAAGAGGTCGGACCCTTCCC | 61.199 | 60.000 | 23.21 | 8.06 | 39.75 | 3.97 |
2244 | 2290 | 0.036294 | CAAAGAGGTCGGACCCTTCC | 60.036 | 60.000 | 23.21 | 10.42 | 39.75 | 3.46 |
2245 | 2291 | 0.036294 | CCAAAGAGGTCGGACCCTTC | 60.036 | 60.000 | 23.21 | 15.09 | 39.75 | 3.46 |
2246 | 2292 | 1.489560 | CCCAAAGAGGTCGGACCCTT | 61.490 | 60.000 | 23.21 | 20.80 | 39.75 | 3.95 |
2247 | 2293 | 1.918800 | CCCAAAGAGGTCGGACCCT | 60.919 | 63.158 | 23.21 | 16.46 | 39.75 | 4.34 |
2248 | 2294 | 2.181445 | GACCCAAAGAGGTCGGACCC | 62.181 | 65.000 | 23.21 | 14.51 | 46.57 | 4.46 |
2249 | 2295 | 1.295746 | GACCCAAAGAGGTCGGACC | 59.704 | 63.158 | 19.61 | 19.61 | 46.57 | 4.46 |
2255 | 2301 | 3.369157 | GCGTACAATAGACCCAAAGAGGT | 60.369 | 47.826 | 0.00 | 0.00 | 45.12 | 3.85 |
2256 | 2302 | 3.195661 | GCGTACAATAGACCCAAAGAGG | 58.804 | 50.000 | 0.00 | 0.00 | 37.03 | 3.69 |
2257 | 2303 | 3.857052 | TGCGTACAATAGACCCAAAGAG | 58.143 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
2258 | 2304 | 3.857052 | CTGCGTACAATAGACCCAAAGA | 58.143 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
2259 | 2305 | 2.351726 | GCTGCGTACAATAGACCCAAAG | 59.648 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2260 | 2306 | 2.352388 | GCTGCGTACAATAGACCCAAA | 58.648 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
2261 | 2307 | 1.406341 | GGCTGCGTACAATAGACCCAA | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
2262 | 2308 | 0.177141 | GGCTGCGTACAATAGACCCA | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2263 | 2309 | 0.464452 | AGGCTGCGTACAATAGACCC | 59.536 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2264 | 2310 | 2.311124 | AAGGCTGCGTACAATAGACC | 57.689 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2265 | 2311 | 2.608090 | GGAAAGGCTGCGTACAATAGAC | 59.392 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2266 | 2312 | 2.419574 | GGGAAAGGCTGCGTACAATAGA | 60.420 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2267 | 2313 | 1.940613 | GGGAAAGGCTGCGTACAATAG | 59.059 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
2268 | 2314 | 1.557832 | AGGGAAAGGCTGCGTACAATA | 59.442 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
2269 | 2315 | 0.328258 | AGGGAAAGGCTGCGTACAAT | 59.672 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2270 | 2316 | 0.978151 | TAGGGAAAGGCTGCGTACAA | 59.022 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2271 | 2317 | 0.248289 | GTAGGGAAAGGCTGCGTACA | 59.752 | 55.000 | 0.00 | 0.00 | 36.89 | 2.90 |
2272 | 2318 | 0.248289 | TGTAGGGAAAGGCTGCGTAC | 59.752 | 55.000 | 0.00 | 0.00 | 37.28 | 3.67 |
2273 | 2319 | 1.200519 | ATGTAGGGAAAGGCTGCGTA | 58.799 | 50.000 | 0.00 | 0.00 | 0.00 | 4.42 |
2274 | 2320 | 0.328258 | AATGTAGGGAAAGGCTGCGT | 59.672 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
2275 | 2321 | 1.401905 | GAAATGTAGGGAAAGGCTGCG | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
2276 | 2322 | 2.424956 | CAGAAATGTAGGGAAAGGCTGC | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2277 | 2323 | 2.424956 | GCAGAAATGTAGGGAAAGGCTG | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2278 | 2324 | 2.041620 | TGCAGAAATGTAGGGAAAGGCT | 59.958 | 45.455 | 0.00 | 0.00 | 0.00 | 4.58 |
2279 | 2325 | 2.446435 | TGCAGAAATGTAGGGAAAGGC | 58.554 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2280 | 2326 | 4.335416 | TCTTGCAGAAATGTAGGGAAAGG | 58.665 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
2281 | 2327 | 4.397417 | CCTCTTGCAGAAATGTAGGGAAAG | 59.603 | 45.833 | 0.00 | 0.00 | 0.00 | 2.62 |
2282 | 2328 | 4.335416 | CCTCTTGCAGAAATGTAGGGAAA | 58.665 | 43.478 | 0.00 | 0.00 | 0.00 | 3.13 |
2283 | 2329 | 3.873801 | GCCTCTTGCAGAAATGTAGGGAA | 60.874 | 47.826 | 0.00 | 0.00 | 40.77 | 3.97 |
2284 | 2330 | 2.356125 | GCCTCTTGCAGAAATGTAGGGA | 60.356 | 50.000 | 0.00 | 0.00 | 40.77 | 4.20 |
2285 | 2331 | 2.019984 | GCCTCTTGCAGAAATGTAGGG | 58.980 | 52.381 | 0.00 | 0.00 | 40.77 | 3.53 |
2286 | 2332 | 2.681848 | CAGCCTCTTGCAGAAATGTAGG | 59.318 | 50.000 | 0.00 | 0.00 | 44.83 | 3.18 |
2287 | 2333 | 3.341823 | ACAGCCTCTTGCAGAAATGTAG | 58.658 | 45.455 | 0.00 | 0.00 | 44.83 | 2.74 |
2288 | 2334 | 3.423539 | ACAGCCTCTTGCAGAAATGTA | 57.576 | 42.857 | 0.00 | 0.00 | 44.83 | 2.29 |
2289 | 2335 | 2.283145 | ACAGCCTCTTGCAGAAATGT | 57.717 | 45.000 | 0.00 | 0.00 | 44.83 | 2.71 |
2290 | 2336 | 3.572584 | GAAACAGCCTCTTGCAGAAATG | 58.427 | 45.455 | 0.00 | 0.00 | 44.83 | 2.32 |
2291 | 2337 | 2.560105 | GGAAACAGCCTCTTGCAGAAAT | 59.440 | 45.455 | 0.00 | 0.00 | 44.83 | 2.17 |
2292 | 2338 | 1.956477 | GGAAACAGCCTCTTGCAGAAA | 59.044 | 47.619 | 0.00 | 0.00 | 44.83 | 2.52 |
2293 | 2339 | 1.133823 | TGGAAACAGCCTCTTGCAGAA | 60.134 | 47.619 | 0.00 | 0.00 | 44.83 | 3.02 |
2294 | 2340 | 0.473755 | TGGAAACAGCCTCTTGCAGA | 59.526 | 50.000 | 0.00 | 0.00 | 44.83 | 4.26 |
2295 | 2341 | 3.025924 | TGGAAACAGCCTCTTGCAG | 57.974 | 52.632 | 0.00 | 0.00 | 44.83 | 4.41 |
2306 | 2352 | 1.476110 | CGGGTTCAAGTCCTGGAAACA | 60.476 | 52.381 | 0.00 | 0.00 | 32.36 | 2.83 |
2307 | 2353 | 1.235724 | CGGGTTCAAGTCCTGGAAAC | 58.764 | 55.000 | 0.00 | 0.00 | 0.00 | 2.78 |
2308 | 2354 | 0.841289 | ACGGGTTCAAGTCCTGGAAA | 59.159 | 50.000 | 0.00 | 0.00 | 35.79 | 3.13 |
2309 | 2355 | 0.107831 | CACGGGTTCAAGTCCTGGAA | 59.892 | 55.000 | 0.00 | 0.00 | 35.79 | 3.53 |
2310 | 2356 | 0.761323 | TCACGGGTTCAAGTCCTGGA | 60.761 | 55.000 | 0.00 | 0.00 | 35.79 | 3.86 |
2311 | 2357 | 0.602905 | GTCACGGGTTCAAGTCCTGG | 60.603 | 60.000 | 0.00 | 0.00 | 35.79 | 4.45 |
2312 | 2358 | 0.602905 | GGTCACGGGTTCAAGTCCTG | 60.603 | 60.000 | 0.00 | 0.00 | 37.36 | 3.86 |
2313 | 2359 | 0.763223 | AGGTCACGGGTTCAAGTCCT | 60.763 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2314 | 2360 | 0.320508 | GAGGTCACGGGTTCAAGTCC | 60.321 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2315 | 2361 | 0.391597 | TGAGGTCACGGGTTCAAGTC | 59.608 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2316 | 2362 | 1.056660 | ATGAGGTCACGGGTTCAAGT | 58.943 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2317 | 2363 | 1.442769 | CATGAGGTCACGGGTTCAAG | 58.557 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2318 | 2364 | 0.036164 | CCATGAGGTCACGGGTTCAA | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2319 | 2365 | 1.676968 | CCATGAGGTCACGGGTTCA | 59.323 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
2320 | 2366 | 4.617875 | CCATGAGGTCACGGGTTC | 57.382 | 61.111 | 0.00 | 0.00 | 0.00 | 3.62 |
2330 | 2376 | 1.310933 | GCTGCCTTGTGACCATGAGG | 61.311 | 60.000 | 0.00 | 0.00 | 42.21 | 3.86 |
2331 | 2377 | 0.607217 | TGCTGCCTTGTGACCATGAG | 60.607 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2332 | 2378 | 0.607217 | CTGCTGCCTTGTGACCATGA | 60.607 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2333 | 2379 | 1.880894 | CTGCTGCCTTGTGACCATG | 59.119 | 57.895 | 0.00 | 0.00 | 0.00 | 3.66 |
2334 | 2380 | 1.975407 | GCTGCTGCCTTGTGACCAT | 60.975 | 57.895 | 3.85 | 0.00 | 0.00 | 3.55 |
2335 | 2381 | 2.595463 | GCTGCTGCCTTGTGACCA | 60.595 | 61.111 | 3.85 | 0.00 | 0.00 | 4.02 |
2336 | 2382 | 1.458639 | AAAGCTGCTGCCTTGTGACC | 61.459 | 55.000 | 12.44 | 0.00 | 40.80 | 4.02 |
2337 | 2383 | 1.068954 | GTAAAGCTGCTGCCTTGTGAC | 60.069 | 52.381 | 12.44 | 0.00 | 40.80 | 3.67 |
2338 | 2384 | 1.238439 | GTAAAGCTGCTGCCTTGTGA | 58.762 | 50.000 | 12.44 | 0.00 | 40.80 | 3.58 |
2339 | 2385 | 0.242017 | GGTAAAGCTGCTGCCTTGTG | 59.758 | 55.000 | 12.44 | 0.00 | 40.80 | 3.33 |
2340 | 2386 | 0.178992 | TGGTAAAGCTGCTGCCTTGT | 60.179 | 50.000 | 12.44 | 0.00 | 40.80 | 3.16 |
2341 | 2387 | 0.242017 | GTGGTAAAGCTGCTGCCTTG | 59.758 | 55.000 | 12.44 | 0.00 | 40.80 | 3.61 |
2342 | 2388 | 0.111253 | AGTGGTAAAGCTGCTGCCTT | 59.889 | 50.000 | 12.44 | 8.34 | 40.80 | 4.35 |
2343 | 2389 | 0.607489 | CAGTGGTAAAGCTGCTGCCT | 60.607 | 55.000 | 12.44 | 2.45 | 40.80 | 4.75 |
2344 | 2390 | 1.878775 | CAGTGGTAAAGCTGCTGCC | 59.121 | 57.895 | 12.44 | 7.07 | 40.80 | 4.85 |
2349 | 2395 | 1.514678 | TTGGCGCAGTGGTAAAGCTG | 61.515 | 55.000 | 10.83 | 0.00 | 35.93 | 4.24 |
2350 | 2396 | 1.228124 | TTGGCGCAGTGGTAAAGCT | 60.228 | 52.632 | 10.83 | 0.00 | 0.00 | 3.74 |
2351 | 2397 | 1.210155 | CTTGGCGCAGTGGTAAAGC | 59.790 | 57.895 | 10.83 | 0.00 | 0.00 | 3.51 |
2352 | 2398 | 1.875963 | CCTTGGCGCAGTGGTAAAG | 59.124 | 57.895 | 10.83 | 0.71 | 0.00 | 1.85 |
2353 | 2399 | 2.265182 | GCCTTGGCGCAGTGGTAAA | 61.265 | 57.895 | 10.83 | 0.00 | 0.00 | 2.01 |
2354 | 2400 | 2.671619 | GCCTTGGCGCAGTGGTAA | 60.672 | 61.111 | 10.83 | 0.00 | 0.00 | 2.85 |
2355 | 2401 | 3.605749 | GAGCCTTGGCGCAGTGGTA | 62.606 | 63.158 | 10.83 | 0.00 | 0.00 | 3.25 |
2363 | 2409 | 3.273788 | AAGAAGGGGAGCCTTGGCG | 62.274 | 63.158 | 5.95 | 0.00 | 0.00 | 5.69 |
2364 | 2410 | 1.379176 | GAAGAAGGGGAGCCTTGGC | 60.379 | 63.158 | 2.97 | 2.97 | 0.00 | 4.52 |
2365 | 2411 | 0.701147 | AAGAAGAAGGGGAGCCTTGG | 59.299 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2366 | 2412 | 2.092699 | CCTAAGAAGAAGGGGAGCCTTG | 60.093 | 54.545 | 0.00 | 0.00 | 0.00 | 3.61 |
2367 | 2413 | 2.200955 | CCTAAGAAGAAGGGGAGCCTT | 58.799 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
2368 | 2414 | 1.366435 | TCCTAAGAAGAAGGGGAGCCT | 59.634 | 52.381 | 0.00 | 0.00 | 34.66 | 4.58 |
2369 | 2415 | 1.880941 | TCCTAAGAAGAAGGGGAGCC | 58.119 | 55.000 | 0.00 | 0.00 | 34.66 | 4.70 |
2370 | 2416 | 3.313791 | AGATCCTAAGAAGAAGGGGAGC | 58.686 | 50.000 | 0.00 | 0.00 | 34.66 | 4.70 |
2371 | 2417 | 4.588528 | CAGAGATCCTAAGAAGAAGGGGAG | 59.411 | 50.000 | 0.00 | 0.00 | 34.66 | 4.30 |
2372 | 2418 | 4.016105 | ACAGAGATCCTAAGAAGAAGGGGA | 60.016 | 45.833 | 0.00 | 0.00 | 34.66 | 4.81 |
2373 | 2419 | 4.294347 | ACAGAGATCCTAAGAAGAAGGGG | 58.706 | 47.826 | 0.00 | 0.00 | 34.66 | 4.79 |
2374 | 2420 | 6.133356 | AGTACAGAGATCCTAAGAAGAAGGG | 58.867 | 44.000 | 0.00 | 0.00 | 34.66 | 3.95 |
2375 | 2421 | 7.201875 | GGAAGTACAGAGATCCTAAGAAGAAGG | 60.202 | 44.444 | 0.00 | 0.00 | 35.26 | 3.46 |
2376 | 2422 | 7.340743 | TGGAAGTACAGAGATCCTAAGAAGAAG | 59.659 | 40.741 | 0.00 | 0.00 | 33.02 | 2.85 |
2377 | 2423 | 7.182760 | TGGAAGTACAGAGATCCTAAGAAGAA | 58.817 | 38.462 | 0.00 | 0.00 | 33.02 | 2.52 |
2378 | 2424 | 6.732487 | TGGAAGTACAGAGATCCTAAGAAGA | 58.268 | 40.000 | 0.00 | 0.00 | 33.02 | 2.87 |
2379 | 2425 | 7.411486 | TTGGAAGTACAGAGATCCTAAGAAG | 57.589 | 40.000 | 0.00 | 0.00 | 33.02 | 2.85 |
2380 | 2426 | 7.792364 | TTTGGAAGTACAGAGATCCTAAGAA | 57.208 | 36.000 | 0.00 | 0.00 | 33.02 | 2.52 |
2381 | 2427 | 7.792364 | TTTTGGAAGTACAGAGATCCTAAGA | 57.208 | 36.000 | 0.00 | 0.00 | 30.46 | 2.10 |
2385 | 2431 | 8.552296 | ACATAATTTTGGAAGTACAGAGATCCT | 58.448 | 33.333 | 0.00 | 0.00 | 33.02 | 3.24 |
2386 | 2432 | 8.738645 | ACATAATTTTGGAAGTACAGAGATCC | 57.261 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
2388 | 2434 | 9.739276 | TGAACATAATTTTGGAAGTACAGAGAT | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 2.75 |
2389 | 2435 | 9.739276 | ATGAACATAATTTTGGAAGTACAGAGA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.10 |
2390 | 2436 | 9.994432 | GATGAACATAATTTTGGAAGTACAGAG | 57.006 | 33.333 | 0.00 | 0.00 | 0.00 | 3.35 |
2391 | 2437 | 9.513906 | TGATGAACATAATTTTGGAAGTACAGA | 57.486 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
2467 | 2513 | 2.535012 | TACGACTGAAACATGTGCCA | 57.465 | 45.000 | 0.00 | 0.00 | 0.00 | 4.92 |
2488 | 2534 | 2.800544 | CGATAGTTAAACCCAGATGCCG | 59.199 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2582 | 2628 | 9.975218 | AACCTTTACTGTAATCATATTTCAGGT | 57.025 | 29.630 | 0.37 | 5.21 | 0.00 | 4.00 |
2613 | 2659 | 6.969993 | AGGACTGGCTAAAAATTTGTGTAA | 57.030 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
2661 | 2707 | 7.352739 | CAACGACAAAAAGAAGCACTAGTTAT | 58.647 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
2665 | 2711 | 3.968724 | GCAACGACAAAAAGAAGCACTAG | 59.031 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2682 | 2728 | 1.440353 | GCGCCAGTTACTTGCAACG | 60.440 | 57.895 | 9.09 | 0.00 | 33.50 | 4.10 |
2728 | 2774 | 8.353684 | ACTATATCTAATGACCGAACAGAACAG | 58.646 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
2752 | 2798 | 9.628500 | CCAAGGCTATAGGTAAAATTAAGAACT | 57.372 | 33.333 | 1.04 | 0.00 | 0.00 | 3.01 |
2786 | 2832 | 7.148423 | TGGAGTCTGTATCAAATTGATGTTTCG | 60.148 | 37.037 | 17.93 | 3.21 | 37.70 | 3.46 |
2835 | 2881 | 3.826524 | TGGTTCAAGTGCCTCATGTAAA | 58.173 | 40.909 | 0.00 | 0.00 | 0.00 | 2.01 |
3064 | 3110 | 8.706936 | CATCCACAACTTATCTCTCGAATTATG | 58.293 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
3120 | 3166 | 1.939974 | TCTAGCAGCGCCATAACAAG | 58.060 | 50.000 | 2.29 | 0.00 | 0.00 | 3.16 |
3282 | 3330 | 3.559384 | GCTTGCTTAGGGGTCAAGTAAGT | 60.559 | 47.826 | 12.40 | 0.00 | 43.50 | 2.24 |
3357 | 3423 | 3.194329 | GGTGGGGTGTAGTGTTAGAGTAC | 59.806 | 52.174 | 0.00 | 0.00 | 0.00 | 2.73 |
3390 | 3456 | 1.291588 | CTGCAGCTCGAGGACAAGT | 59.708 | 57.895 | 15.58 | 0.00 | 0.00 | 3.16 |
3437 | 3503 | 4.904253 | TTAGGTGTTAGGTTTGTGTTGC | 57.096 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
3441 | 3507 | 6.254804 | GCTTGTTTTTAGGTGTTAGGTTTGTG | 59.745 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
3466 | 3532 | 4.766404 | AAACAAGCCGAGATGTAAAAGG | 57.234 | 40.909 | 0.00 | 0.00 | 0.00 | 3.11 |
3473 | 3539 | 7.919690 | TGAGAATAATAAAACAAGCCGAGATG | 58.080 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
3500 | 3566 | 6.667848 | AGGGTCCAAAATAAGTCCATTTTAGG | 59.332 | 38.462 | 0.00 | 0.00 | 36.26 | 2.69 |
3503 | 3569 | 7.387265 | AAAGGGTCCAAAATAAGTCCATTTT | 57.613 | 32.000 | 0.00 | 0.00 | 38.37 | 1.82 |
3507 | 3573 | 6.374588 | TGTTAAAGGGTCCAAAATAAGTCCA | 58.625 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3525 | 3600 | 5.908341 | GGATGGTGTCCACTTTTTGTTAAA | 58.092 | 37.500 | 0.00 | 0.00 | 46.96 | 1.52 |
3565 | 3640 | 0.613260 | GATCCAGGTGGCTGTACACA | 59.387 | 55.000 | 0.00 | 0.00 | 43.08 | 3.72 |
3571 | 3646 | 1.152819 | CATGGGATCCAGGTGGCTG | 60.153 | 63.158 | 15.23 | 0.00 | 36.75 | 4.85 |
3577 | 3652 | 1.281199 | TGGTGTCCATGGGATCCAGG | 61.281 | 60.000 | 15.23 | 12.26 | 36.75 | 4.45 |
3598 | 3673 | 1.133513 | ACATGCACTCCTTTGGTCCAA | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
3604 | 3679 | 2.159338 | GCCATACACATGCACTCCTTTG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
3612 | 3687 | 0.680601 | CAGGTGGCCATACACATGCA | 60.681 | 55.000 | 9.72 | 0.00 | 44.59 | 3.96 |
3675 | 3750 | 4.980805 | ACTGCTTTTCGCCGCCGA | 62.981 | 61.111 | 0.00 | 0.00 | 42.66 | 5.54 |
3679 | 3754 | 2.252260 | CACCACTGCTTTTCGCCG | 59.748 | 61.111 | 0.00 | 0.00 | 38.05 | 6.46 |
3703 | 3778 | 4.363990 | CACCGACAGGAGCGCACT | 62.364 | 66.667 | 11.47 | 4.05 | 41.02 | 4.40 |
3708 | 3783 | 2.048127 | GGTGTCACCGACAGGAGC | 60.048 | 66.667 | 6.18 | 0.00 | 43.57 | 4.70 |
3741 | 3816 | 2.738521 | CAGACCAACAGCCGTCCG | 60.739 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3766 | 3841 | 1.909302 | CAAGCCCTCCACTCTTTCCTA | 59.091 | 52.381 | 0.00 | 0.00 | 0.00 | 2.94 |
4612 | 6629 | 1.882989 | GCCTGTCTCTTCCGCTGTCT | 61.883 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4614 | 6631 | 1.476007 | AAGCCTGTCTCTTCCGCTGT | 61.476 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4692 | 6709 | 2.833582 | TCGCGCCCTCCTTCTAGG | 60.834 | 66.667 | 0.00 | 0.00 | 36.46 | 3.02 |
4926 | 6943 | 8.915057 | ACATAGCTGCACAATAAGAATAGAAT | 57.085 | 30.769 | 1.02 | 0.00 | 0.00 | 2.40 |
4928 | 6945 | 7.254898 | GCAACATAGCTGCACAATAAGAATAGA | 60.255 | 37.037 | 1.02 | 0.00 | 39.69 | 1.98 |
4937 | 6954 | 0.179156 | GCGCAACATAGCTGCACAAT | 60.179 | 50.000 | 0.30 | 0.00 | 39.91 | 2.71 |
4958 | 6975 | 1.137086 | AGCCCACTGTTAGCATACTCG | 59.863 | 52.381 | 2.08 | 0.00 | 0.00 | 4.18 |
5093 | 7110 | 7.020827 | AGGGATCTCAAACATAACAGAAGAA | 57.979 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5142 | 7217 | 4.803613 | CGTGAATAGCAATAGCAGTGTGTA | 59.196 | 41.667 | 0.00 | 0.00 | 45.49 | 2.90 |
5153 | 7228 | 5.583457 | GGTTTACCTACACGTGAATAGCAAT | 59.417 | 40.000 | 25.01 | 0.00 | 0.00 | 3.56 |
5162 | 7237 | 3.436704 | TCGACTAGGTTTACCTACACGTG | 59.563 | 47.826 | 15.48 | 15.48 | 46.48 | 4.49 |
5165 | 7240 | 5.346522 | CCAATCGACTAGGTTTACCTACAC | 58.653 | 45.833 | 4.52 | 2.03 | 46.48 | 2.90 |
5215 | 7290 | 1.275291 | GGATCCACCACTTCGTCAGAA | 59.725 | 52.381 | 6.95 | 0.00 | 38.79 | 3.02 |
5254 | 7329 | 1.192534 | CGTTTGAGCTCCTTTGTCGAC | 59.807 | 52.381 | 12.15 | 9.11 | 0.00 | 4.20 |
5266 | 7341 | 0.383949 | TCAAAAGGGCACGTTTGAGC | 59.616 | 50.000 | 23.60 | 0.00 | 46.19 | 4.26 |
5305 | 7380 | 1.472376 | GGTCTCTTCTCCGCATTCAGG | 60.472 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
5314 | 7389 | 2.472029 | TCCATCCTTGGTCTCTTCTCC | 58.528 | 52.381 | 0.00 | 0.00 | 44.06 | 3.71 |
5359 | 7434 | 2.932614 | CTCTTGAGGTATGGTTTCGCTG | 59.067 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
5438 | 7513 | 5.569355 | TGGATGAAAGTAGCAGGAAAATGA | 58.431 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
5452 | 7527 | 8.418662 | ACCAATTGATCATACAATGGATGAAAG | 58.581 | 33.333 | 12.72 | 0.00 | 39.88 | 2.62 |
5459 | 7534 | 6.500910 | CAGTGACCAATTGATCATACAATGG | 58.499 | 40.000 | 5.61 | 3.87 | 39.88 | 3.16 |
5481 | 7556 | 4.142160 | TGGCAAGTATACTCTACTGTGCAG | 60.142 | 45.833 | 20.80 | 0.00 | 35.41 | 4.41 |
5491 | 7566 | 8.451908 | AACCAAATAAGATGGCAAGTATACTC | 57.548 | 34.615 | 5.70 | 0.00 | 41.89 | 2.59 |
5494 | 7569 | 9.515226 | GGATAACCAAATAAGATGGCAAGTATA | 57.485 | 33.333 | 0.00 | 0.00 | 41.89 | 1.47 |
5495 | 7570 | 8.227507 | AGGATAACCAAATAAGATGGCAAGTAT | 58.772 | 33.333 | 0.00 | 0.00 | 41.89 | 2.12 |
5497 | 7572 | 6.435164 | AGGATAACCAAATAAGATGGCAAGT | 58.565 | 36.000 | 0.00 | 0.00 | 41.89 | 3.16 |
5498 | 7573 | 6.966534 | AGGATAACCAAATAAGATGGCAAG | 57.033 | 37.500 | 0.00 | 0.00 | 41.89 | 4.01 |
5528 | 7627 | 2.738846 | CCAAATGGAGTCGACAGAACAG | 59.261 | 50.000 | 19.50 | 1.68 | 37.39 | 3.16 |
5535 | 7634 | 3.119101 | TCTCTAAGCCAAATGGAGTCGAC | 60.119 | 47.826 | 7.70 | 7.70 | 37.39 | 4.20 |
5536 | 7635 | 3.096852 | TCTCTAAGCCAAATGGAGTCGA | 58.903 | 45.455 | 2.98 | 0.00 | 37.39 | 4.20 |
5601 | 7706 | 5.259832 | TGCATGTTCAACTTTTGTGATGA | 57.740 | 34.783 | 0.00 | 0.00 | 0.00 | 2.92 |
5602 | 7707 | 5.521010 | ACTTGCATGTTCAACTTTTGTGATG | 59.479 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
5644 | 7749 | 0.314302 | CGGTTCTGTCGTGGTCTTCT | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5667 | 7772 | 4.184629 | GCACGGTTTCAGTATTCTCAGAT | 58.815 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
5755 | 7860 | 3.724374 | ACGAAAATGGACGAGTCTTTGA | 58.276 | 40.909 | 3.09 | 0.00 | 0.00 | 2.69 |
5762 | 7867 | 3.435327 | TCATTTGGACGAAAATGGACGAG | 59.565 | 43.478 | 16.89 | 0.00 | 44.28 | 4.18 |
5820 | 7929 | 6.375377 | CACGCAGGTATCTCTCTATCTTTAC | 58.625 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
5839 | 7950 | 2.636462 | CATGTTGTTCCGCACGCA | 59.364 | 55.556 | 0.00 | 0.00 | 0.00 | 5.24 |
5843 | 7954 | 0.888736 | CTCCACCATGTTGTTCCGCA | 60.889 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
5990 | 8101 | 6.349611 | CCAGACCGTTTTACAAGCTACTAGTA | 60.350 | 42.308 | 1.89 | 1.89 | 0.00 | 1.82 |
5993 | 8104 | 4.523943 | TCCAGACCGTTTTACAAGCTACTA | 59.476 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
5994 | 8105 | 3.322828 | TCCAGACCGTTTTACAAGCTACT | 59.677 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
5995 | 8106 | 3.656559 | TCCAGACCGTTTTACAAGCTAC | 58.343 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
6015 | 8126 | 0.673022 | CACACCAGCTGAGAGCCTTC | 60.673 | 60.000 | 17.39 | 0.00 | 43.77 | 3.46 |
6076 | 8190 | 9.326413 | GCTTTATACTCTTGGTGTGTACAATAT | 57.674 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
6125 | 8239 | 0.880278 | CACTGACAACCACCCACGAG | 60.880 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
6155 | 8276 | 9.525826 | AGGATAAACTTTTTCAGATTCAGACAT | 57.474 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
6156 | 8277 | 8.924511 | AGGATAAACTTTTTCAGATTCAGACA | 57.075 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
6178 | 8299 | 9.868160 | TTGATACATCACTCTCTATTCTAAGGA | 57.132 | 33.333 | 0.00 | 0.00 | 36.36 | 3.36 |
6187 | 8308 | 9.475620 | TTCCTTTACTTGATACATCACTCTCTA | 57.524 | 33.333 | 0.00 | 0.00 | 36.36 | 2.43 |
6204 | 8579 | 9.354673 | TCAAATGACAAGAATTCTTCCTTTACT | 57.645 | 29.630 | 17.91 | 0.00 | 33.11 | 2.24 |
6227 | 8602 | 6.127507 | TGGTCACAAACAATGATCAAAGTCAA | 60.128 | 34.615 | 0.00 | 0.00 | 34.24 | 3.18 |
6261 | 8639 | 7.865706 | TCATTTTAACTTCAGAAGGATAGCC | 57.134 | 36.000 | 14.90 | 0.00 | 0.00 | 3.93 |
6274 | 8652 | 6.399639 | ACAACCACGGAATCATTTTAACTT | 57.600 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
6289 | 8667 | 4.811555 | TTTCATCTCTGAAACAACCACG | 57.188 | 40.909 | 0.00 | 0.00 | 44.46 | 4.94 |
6307 | 8685 | 8.601476 | CAAAACGGAGGTACTAGTAATCATTTC | 58.399 | 37.037 | 3.61 | 0.00 | 41.55 | 2.17 |
6320 | 8698 | 6.092670 | GGACTAATAAACCAAAACGGAGGTAC | 59.907 | 42.308 | 0.00 | 0.00 | 37.07 | 3.34 |
6321 | 8699 | 6.172630 | GGACTAATAAACCAAAACGGAGGTA | 58.827 | 40.000 | 0.00 | 0.00 | 37.07 | 3.08 |
6322 | 8700 | 5.005740 | GGACTAATAAACCAAAACGGAGGT | 58.994 | 41.667 | 0.00 | 0.00 | 40.61 | 3.85 |
6325 | 8703 | 5.245584 | AGGGACTAATAAACCAAAACGGA | 57.754 | 39.130 | 0.00 | 0.00 | 36.02 | 4.69 |
6326 | 8704 | 5.970317 | AAGGGACTAATAAACCAAAACGG | 57.030 | 39.130 | 0.00 | 0.00 | 38.49 | 4.44 |
6328 | 8706 | 6.973843 | ACGAAAGGGACTAATAAACCAAAAC | 58.026 | 36.000 | 0.00 | 0.00 | 38.49 | 2.43 |
6329 | 8707 | 8.866970 | ATACGAAAGGGACTAATAAACCAAAA | 57.133 | 30.769 | 0.00 | 0.00 | 38.49 | 2.44 |
6330 | 8708 | 8.866970 | AATACGAAAGGGACTAATAAACCAAA | 57.133 | 30.769 | 0.00 | 0.00 | 38.49 | 3.28 |
6458 | 8879 | 9.950680 | ACTCCTAATTTATATGCAACGAAAATG | 57.049 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
6521 | 8946 | 1.758862 | CGGGTTTATTAGTCCCCTCGT | 59.241 | 52.381 | 0.00 | 0.00 | 38.09 | 4.18 |
6526 | 8951 | 1.839354 | TCACCCGGGTTTATTAGTCCC | 59.161 | 52.381 | 27.83 | 0.00 | 37.98 | 4.46 |
6528 | 8953 | 4.520179 | ACATTCACCCGGGTTTATTAGTC | 58.480 | 43.478 | 27.83 | 0.00 | 0.00 | 2.59 |
6534 | 8959 | 3.837146 | TGTACTACATTCACCCGGGTTTA | 59.163 | 43.478 | 27.83 | 15.96 | 0.00 | 2.01 |
6561 | 8986 | 4.516698 | ACAGATAAACACCTGTCTTTGCAG | 59.483 | 41.667 | 0.00 | 0.00 | 36.31 | 4.41 |
6563 | 8988 | 4.515191 | TGACAGATAAACACCTGTCTTTGC | 59.485 | 41.667 | 19.19 | 0.00 | 44.45 | 3.68 |
6564 | 8989 | 5.527214 | TGTGACAGATAAACACCTGTCTTTG | 59.473 | 40.000 | 19.19 | 0.00 | 44.45 | 2.77 |
6570 | 9016 | 5.300752 | AGACTTGTGACAGATAAACACCTG | 58.699 | 41.667 | 0.00 | 0.00 | 34.18 | 4.00 |
6634 | 9080 | 5.750352 | AACGGAGGGAGTAGATAAAAACA | 57.250 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
6635 | 9081 | 6.168389 | TGAAACGGAGGGAGTAGATAAAAAC | 58.832 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
6647 | 9093 | 3.007182 | ACGAGTAATTTGAAACGGAGGGA | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
6648 | 9094 | 3.332034 | ACGAGTAATTTGAAACGGAGGG | 58.668 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
6649 | 9095 | 3.060363 | CGACGAGTAATTTGAAACGGAGG | 59.940 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
6650 | 9096 | 3.481467 | GCGACGAGTAATTTGAAACGGAG | 60.481 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
6651 | 9097 | 2.409378 | GCGACGAGTAATTTGAAACGGA | 59.591 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
6652 | 9098 | 2.410730 | AGCGACGAGTAATTTGAAACGG | 59.589 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
6653 | 9099 | 3.700130 | AGCGACGAGTAATTTGAAACG | 57.300 | 42.857 | 0.00 | 0.00 | 0.00 | 3.60 |
6654 | 9100 | 7.007099 | CCATTTTAGCGACGAGTAATTTGAAAC | 59.993 | 37.037 | 0.00 | 0.00 | 0.00 | 2.78 |
6655 | 9101 | 7.018826 | CCATTTTAGCGACGAGTAATTTGAAA | 58.981 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
6656 | 9102 | 6.369340 | TCCATTTTAGCGACGAGTAATTTGAA | 59.631 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
6657 | 9103 | 5.870433 | TCCATTTTAGCGACGAGTAATTTGA | 59.130 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
6658 | 9104 | 6.102006 | TCCATTTTAGCGACGAGTAATTTG | 57.898 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
6659 | 9105 | 6.315393 | ACATCCATTTTAGCGACGAGTAATTT | 59.685 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
6660 | 9106 | 5.815740 | ACATCCATTTTAGCGACGAGTAATT | 59.184 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6661 | 9107 | 5.357257 | ACATCCATTTTAGCGACGAGTAAT | 58.643 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
6662 | 9108 | 4.751060 | ACATCCATTTTAGCGACGAGTAA | 58.249 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
6663 | 9109 | 4.380841 | ACATCCATTTTAGCGACGAGTA | 57.619 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
6664 | 9110 | 3.247006 | ACATCCATTTTAGCGACGAGT | 57.753 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
6665 | 9111 | 5.223382 | AGATACATCCATTTTAGCGACGAG | 58.777 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
6666 | 9112 | 5.196341 | AGATACATCCATTTTAGCGACGA | 57.804 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
6667 | 9113 | 6.379386 | TCTAGATACATCCATTTTAGCGACG | 58.621 | 40.000 | 0.00 | 0.00 | 0.00 | 5.12 |
6668 | 9114 | 7.868415 | ACTTCTAGATACATCCATTTTAGCGAC | 59.132 | 37.037 | 0.00 | 0.00 | 0.00 | 5.19 |
6669 | 9115 | 7.952671 | ACTTCTAGATACATCCATTTTAGCGA | 58.047 | 34.615 | 0.00 | 0.00 | 0.00 | 4.93 |
6670 | 9116 | 9.692749 | TTACTTCTAGATACATCCATTTTAGCG | 57.307 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
6700 | 9146 | 9.880064 | GTCGCACGTATGAATATATATAGATGT | 57.120 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
6701 | 9147 | 9.878599 | TGTCGCACGTATGAATATATATAGATG | 57.121 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
6703 | 9149 | 9.931210 | CTTGTCGCACGTATGAATATATATAGA | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
6704 | 9150 | 9.717892 | ACTTGTCGCACGTATGAATATATATAG | 57.282 | 33.333 | 0.00 | 0.00 | 0.00 | 1.31 |
6708 | 9154 | 8.981724 | ATTACTTGTCGCACGTATGAATATAT | 57.018 | 30.769 | 0.00 | 0.00 | 0.00 | 0.86 |
6709 | 9155 | 8.806177 | AATTACTTGTCGCACGTATGAATATA | 57.194 | 30.769 | 0.00 | 0.00 | 0.00 | 0.86 |
6710 | 9156 | 7.709269 | AATTACTTGTCGCACGTATGAATAT | 57.291 | 32.000 | 0.00 | 0.00 | 0.00 | 1.28 |
6711 | 9157 | 7.395645 | CAAATTACTTGTCGCACGTATGAATA | 58.604 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
6712 | 9158 | 6.247903 | CAAATTACTTGTCGCACGTATGAAT | 58.752 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6713 | 9159 | 5.390040 | CCAAATTACTTGTCGCACGTATGAA | 60.390 | 40.000 | 0.00 | 0.00 | 32.65 | 2.57 |
6714 | 9160 | 4.092237 | CCAAATTACTTGTCGCACGTATGA | 59.908 | 41.667 | 0.00 | 0.00 | 32.65 | 2.15 |
6715 | 9161 | 4.092237 | TCCAAATTACTTGTCGCACGTATG | 59.908 | 41.667 | 0.00 | 0.00 | 32.65 | 2.39 |
6716 | 9162 | 4.247258 | TCCAAATTACTTGTCGCACGTAT | 58.753 | 39.130 | 0.00 | 0.00 | 32.65 | 3.06 |
6717 | 9163 | 3.651206 | TCCAAATTACTTGTCGCACGTA | 58.349 | 40.909 | 0.00 | 0.00 | 32.65 | 3.57 |
6718 | 9164 | 2.485903 | TCCAAATTACTTGTCGCACGT | 58.514 | 42.857 | 0.00 | 0.00 | 32.65 | 4.49 |
6719 | 9165 | 3.223157 | GTTCCAAATTACTTGTCGCACG | 58.777 | 45.455 | 0.00 | 0.00 | 32.65 | 5.34 |
6720 | 9166 | 3.223157 | CGTTCCAAATTACTTGTCGCAC | 58.777 | 45.455 | 0.00 | 0.00 | 32.65 | 5.34 |
6721 | 9167 | 2.224549 | CCGTTCCAAATTACTTGTCGCA | 59.775 | 45.455 | 0.00 | 0.00 | 32.65 | 5.10 |
6722 | 9168 | 2.481185 | TCCGTTCCAAATTACTTGTCGC | 59.519 | 45.455 | 0.00 | 0.00 | 32.65 | 5.19 |
6723 | 9169 | 3.124636 | CCTCCGTTCCAAATTACTTGTCG | 59.875 | 47.826 | 0.00 | 0.00 | 32.65 | 4.35 |
6724 | 9170 | 3.439129 | CCCTCCGTTCCAAATTACTTGTC | 59.561 | 47.826 | 0.00 | 0.00 | 32.65 | 3.18 |
6725 | 9171 | 3.073356 | TCCCTCCGTTCCAAATTACTTGT | 59.927 | 43.478 | 0.00 | 0.00 | 32.65 | 3.16 |
6726 | 9172 | 3.681593 | TCCCTCCGTTCCAAATTACTTG | 58.318 | 45.455 | 0.00 | 0.00 | 34.52 | 3.16 |
6727 | 9173 | 3.329814 | ACTCCCTCCGTTCCAAATTACTT | 59.670 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
6728 | 9174 | 2.910977 | ACTCCCTCCGTTCCAAATTACT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
6729 | 9175 | 3.345508 | ACTCCCTCCGTTCCAAATTAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
6730 | 9176 | 3.839490 | TGTACTCCCTCCGTTCCAAATTA | 59.161 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
6731 | 9177 | 2.640826 | TGTACTCCCTCCGTTCCAAATT | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
6732 | 9178 | 2.262637 | TGTACTCCCTCCGTTCCAAAT | 58.737 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
6733 | 9179 | 1.719529 | TGTACTCCCTCCGTTCCAAA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
6734 | 9180 | 1.719529 | TTGTACTCCCTCCGTTCCAA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6735 | 9181 | 1.719529 | TTTGTACTCCCTCCGTTCCA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6736 | 9182 | 3.450096 | AGTATTTGTACTCCCTCCGTTCC | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 3.62 |
6737 | 9183 | 4.732672 | AGTATTTGTACTCCCTCCGTTC | 57.267 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
6738 | 9184 | 5.513233 | TCTAGTATTTGTACTCCCTCCGTT | 58.487 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
6739 | 9185 | 5.121380 | TCTAGTATTTGTACTCCCTCCGT | 57.879 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
6740 | 9186 | 6.461110 | TTTCTAGTATTTGTACTCCCTCCG | 57.539 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
6741 | 9187 | 6.610425 | TCCTTTCTAGTATTTGTACTCCCTCC | 59.390 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
6742 | 9188 | 7.657023 | TCCTTTCTAGTATTTGTACTCCCTC | 57.343 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6743 | 9189 | 7.290481 | GGATCCTTTCTAGTATTTGTACTCCCT | 59.710 | 40.741 | 3.84 | 0.00 | 0.00 | 4.20 |
6744 | 9190 | 7.070821 | TGGATCCTTTCTAGTATTTGTACTCCC | 59.929 | 40.741 | 14.23 | 0.00 | 0.00 | 4.30 |
6745 | 9191 | 8.019656 | TGGATCCTTTCTAGTATTTGTACTCC | 57.980 | 38.462 | 14.23 | 0.00 | 0.00 | 3.85 |
6749 | 9195 | 9.120538 | GCAAATGGATCCTTTCTAGTATTTGTA | 57.879 | 33.333 | 21.57 | 0.00 | 36.90 | 2.41 |
6750 | 9196 | 7.068716 | GGCAAATGGATCCTTTCTAGTATTTGT | 59.931 | 37.037 | 21.57 | 1.63 | 36.90 | 2.83 |
6751 | 9197 | 7.068593 | TGGCAAATGGATCCTTTCTAGTATTTG | 59.931 | 37.037 | 14.23 | 17.07 | 37.34 | 2.32 |
6752 | 9198 | 7.068716 | GTGGCAAATGGATCCTTTCTAGTATTT | 59.931 | 37.037 | 14.23 | 5.01 | 0.00 | 1.40 |
6753 | 9199 | 6.547510 | GTGGCAAATGGATCCTTTCTAGTATT | 59.452 | 38.462 | 14.23 | 0.00 | 0.00 | 1.89 |
6754 | 9200 | 6.064717 | GTGGCAAATGGATCCTTTCTAGTAT | 58.935 | 40.000 | 14.23 | 0.00 | 0.00 | 2.12 |
6755 | 9201 | 5.191722 | AGTGGCAAATGGATCCTTTCTAGTA | 59.808 | 40.000 | 14.23 | 0.00 | 0.00 | 1.82 |
6756 | 9202 | 4.018050 | AGTGGCAAATGGATCCTTTCTAGT | 60.018 | 41.667 | 14.23 | 0.61 | 0.00 | 2.57 |
6757 | 9203 | 4.530875 | AGTGGCAAATGGATCCTTTCTAG | 58.469 | 43.478 | 14.23 | 7.96 | 0.00 | 2.43 |
6758 | 9204 | 4.591321 | AGTGGCAAATGGATCCTTTCTA | 57.409 | 40.909 | 14.23 | 0.00 | 0.00 | 2.10 |
6759 | 9205 | 3.463048 | AGTGGCAAATGGATCCTTTCT | 57.537 | 42.857 | 14.23 | 3.18 | 0.00 | 2.52 |
6760 | 9206 | 4.336713 | GTCTAGTGGCAAATGGATCCTTTC | 59.663 | 45.833 | 14.23 | 2.04 | 0.00 | 2.62 |
6761 | 9207 | 4.018050 | AGTCTAGTGGCAAATGGATCCTTT | 60.018 | 41.667 | 14.23 | 10.41 | 0.00 | 3.11 |
6762 | 9208 | 3.525199 | AGTCTAGTGGCAAATGGATCCTT | 59.475 | 43.478 | 14.23 | 3.29 | 0.00 | 3.36 |
6763 | 9209 | 3.118531 | AGTCTAGTGGCAAATGGATCCT | 58.881 | 45.455 | 14.23 | 0.00 | 0.00 | 3.24 |
6764 | 9210 | 3.567478 | AGTCTAGTGGCAAATGGATCC | 57.433 | 47.619 | 4.20 | 4.20 | 0.00 | 3.36 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.