Multiple sequence alignment - TraesCS4B01G137700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G137700 chr4B 100.000 7988 0 0 1 7988 181522661 181514674 0.000000e+00 14752.0
1 TraesCS4B01G137700 chr4B 85.843 1773 195 21 2603 4341 636972077 636973827 0.000000e+00 1832.0
2 TraesCS4B01G137700 chr4B 90.674 1351 41 18 3362 4670 517962221 517963528 0.000000e+00 1718.0
3 TraesCS4B01G137700 chr4B 87.489 1183 113 11 3493 4653 146482809 146481640 0.000000e+00 1332.0
4 TraesCS4B01G137700 chr4B 90.278 864 63 10 1742 2604 453248997 453249840 0.000000e+00 1110.0
5 TraesCS4B01G137700 chr4B 93.178 645 29 5 1960 2604 300803730 300804359 0.000000e+00 933.0
6 TraesCS4B01G137700 chr4B 95.078 386 19 0 1413 1798 576189976 576189591 6.850000e-170 608.0
7 TraesCS4B01G137700 chr4B 93.119 218 10 3 7 224 631549073 631548861 1.670000e-81 315.0
8 TraesCS4B01G137700 chr4B 84.615 104 10 4 7673 7776 115059585 115059682 1.830000e-16 99.0
9 TraesCS4B01G137700 chr4D 96.838 2467 58 7 4671 7117 119366612 119364146 0.000000e+00 4106.0
10 TraesCS4B01G137700 chr4D 90.196 867 31 24 575 1413 119367447 119366607 0.000000e+00 1081.0
11 TraesCS4B01G137700 chr4D 86.998 623 58 9 7309 7913 311901170 311901787 0.000000e+00 680.0
12 TraesCS4B01G137700 chr4D 78.394 523 73 15 7499 7988 37602698 37602183 3.620000e-78 303.0
13 TraesCS4B01G137700 chr4D 82.301 339 40 7 231 553 119370386 119370052 7.900000e-70 276.0
14 TraesCS4B01G137700 chr4D 83.217 286 35 10 7693 7976 506508038 506508312 4.790000e-62 250.0
15 TraesCS4B01G137700 chr4D 84.762 105 16 0 331 435 102140432 102140536 1.100000e-18 106.0
16 TraesCS4B01G137700 chr4D 79.508 122 13 9 7603 7717 311902406 311902290 8.600000e-10 76.8
17 TraesCS4B01G137700 chr4D 97.143 35 1 0 7613 7647 37602435 37602401 8.660000e-05 60.2
18 TraesCS4B01G137700 chr4A 96.074 2471 74 10 4666 7114 453676861 453679330 0.000000e+00 4004.0
19 TraesCS4B01G137700 chr4A 86.654 2113 192 42 2603 4671 242892101 242890035 0.000000e+00 2257.0
20 TraesCS4B01G137700 chr4A 88.033 844 32 12 601 1413 453676068 453676873 0.000000e+00 935.0
21 TraesCS4B01G137700 chr4A 93.924 395 24 0 1406 1800 703239834 703240228 1.480000e-166 597.0
22 TraesCS4B01G137700 chr4A 93.909 394 24 0 1427 1820 242892431 242892038 5.340000e-166 595.0
23 TraesCS4B01G137700 chrUn 88.436 2110 163 30 2603 4672 39708696 39710764 0.000000e+00 2470.0
24 TraesCS4B01G137700 chrUn 85.253 1363 175 15 2603 3946 384235139 384233784 0.000000e+00 1380.0
25 TraesCS4B01G137700 chr6B 88.454 2070 169 21 2653 4671 139461248 139459198 0.000000e+00 2435.0
26 TraesCS4B01G137700 chr6B 89.726 1713 115 18 2998 4668 615261598 615263291 0.000000e+00 2132.0
27 TraesCS4B01G137700 chr6B 89.027 1531 99 25 3118 4603 28218505 28220011 0.000000e+00 1832.0
28 TraesCS4B01G137700 chr6B 91.369 869 63 6 1748 2604 42501463 42502331 0.000000e+00 1179.0
29 TraesCS4B01G137700 chr6B 92.157 816 55 8 1742 2556 462136396 462137203 0.000000e+00 1144.0
30 TraesCS4B01G137700 chr6B 93.118 465 23 5 1741 2200 710613914 710613454 0.000000e+00 673.0
31 TraesCS4B01G137700 chr6B 94.148 393 22 1 1413 1805 101676995 101677386 1.480000e-166 597.0
32 TraesCS4B01G137700 chr3B 87.919 2119 182 32 2603 4670 254190896 254188801 0.000000e+00 2427.0
33 TraesCS4B01G137700 chr3B 89.532 1452 91 18 3192 4597 322299050 322297614 0.000000e+00 1783.0
34 TraesCS4B01G137700 chr3B 88.480 1467 92 29 3118 4540 44764264 44765697 0.000000e+00 1701.0
35 TraesCS4B01G137700 chr3B 84.003 1369 190 10 2603 3946 64546641 64545277 0.000000e+00 1288.0
36 TraesCS4B01G137700 chr3B 91.667 876 60 7 1742 2604 819489543 819490418 0.000000e+00 1201.0
37 TraesCS4B01G137700 chr3B 90.695 763 46 11 1854 2604 367841377 367840628 0.000000e+00 992.0
38 TraesCS4B01G137700 chr3B 94.301 386 20 2 1415 1800 254191236 254190853 2.480000e-164 590.0
39 TraesCS4B01G137700 chr3B 87.387 111 12 2 7844 7954 78551946 78551838 8.420000e-25 126.0
40 TraesCS4B01G137700 chr5A 86.566 2114 204 31 2603 4671 616402565 616400487 0.000000e+00 2257.0
41 TraesCS4B01G137700 chr5A 85.843 2112 215 31 2603 4670 397151384 397153455 0.000000e+00 2167.0
42 TraesCS4B01G137700 chr5A 83.362 1737 224 33 2603 4298 266406121 266407833 0.000000e+00 1546.0
43 TraesCS4B01G137700 chr5A 93.333 825 48 3 2653 3474 36821051 36821871 0.000000e+00 1212.0
44 TraesCS4B01G137700 chr5A 94.723 379 20 0 1427 1805 616402895 616402517 2.480000e-164 590.0
45 TraesCS4B01G137700 chr5A 81.579 228 28 9 20 238 553419566 553419344 8.240000e-40 176.0
46 TraesCS4B01G137700 chr5A 82.902 193 20 7 7556 7735 561185621 561185813 2.310000e-35 161.0
47 TraesCS4B01G137700 chr5A 92.222 90 6 1 20 108 632179716 632179627 8.420000e-25 126.0
48 TraesCS4B01G137700 chr3A 85.978 2111 234 28 2603 4670 33833623 33831532 0.000000e+00 2202.0
49 TraesCS4B01G137700 chr3A 76.037 217 42 8 7533 7739 20780084 20779868 3.940000e-18 104.0
50 TraesCS4B01G137700 chr2B 88.541 1850 140 26 2866 4671 97937790 97939611 0.000000e+00 2176.0
51 TraesCS4B01G137700 chr2B 90.891 1526 94 11 3180 4670 250277777 250279292 0.000000e+00 2006.0
52 TraesCS4B01G137700 chr2B 90.410 1293 74 10 3158 4409 103898430 103899713 0.000000e+00 1655.0
53 TraesCS4B01G137700 chr2B 90.927 518 35 7 2099 2604 263817437 263816920 0.000000e+00 686.0
54 TraesCS4B01G137700 chr2B 91.667 468 35 3 1742 2205 676483895 676483428 0.000000e+00 645.0
55 TraesCS4B01G137700 chr2B 93.893 393 24 0 1413 1805 250276685 250277077 1.920000e-165 593.0
56 TraesCS4B01G137700 chr2B 76.058 685 106 26 7358 7988 372369822 372369142 3.620000e-78 303.0
57 TraesCS4B01G137700 chr7A 85.460 2139 221 35 2603 4671 514820065 514822183 0.000000e+00 2145.0
58 TraesCS4B01G137700 chr7A 82.993 147 14 3 7604 7739 722772213 722772067 1.090000e-23 122.0
59 TraesCS4B01G137700 chr7A 74.788 353 45 27 7527 7841 652277320 652277666 1.410000e-22 119.0
60 TraesCS4B01G137700 chr7A 78.378 185 25 6 7564 7734 303098810 303098627 1.100000e-18 106.0
61 TraesCS4B01G137700 chr7A 80.690 145 14 10 7579 7711 7076140 7075998 5.100000e-17 100.0
62 TraesCS4B01G137700 chr2A 84.802 2145 222 42 2603 4670 428144936 428142819 0.000000e+00 2060.0
63 TraesCS4B01G137700 chr5B 89.649 1652 111 21 3060 4670 601350564 601352196 0.000000e+00 2049.0
64 TraesCS4B01G137700 chr5B 88.955 1512 67 40 3206 4674 440553915 440555369 0.000000e+00 1775.0
65 TraesCS4B01G137700 chr5B 92.832 865 41 5 1752 2604 196242122 196241267 0.000000e+00 1234.0
66 TraesCS4B01G137700 chr7B 87.372 1655 126 33 2998 4605 31793521 31791903 0.000000e+00 1821.0
67 TraesCS4B01G137700 chr7B 91.369 1344 58 25 3180 4487 697046688 697048009 0.000000e+00 1786.0
68 TraesCS4B01G137700 chr7B 84.651 1492 141 35 3158 4597 188938907 188940362 0.000000e+00 1406.0
69 TraesCS4B01G137700 chr7B 84.318 1371 182 15 2603 3946 744010334 744011698 0.000000e+00 1310.0
70 TraesCS4B01G137700 chr7B 91.750 800 60 5 1742 2539 285449575 285450370 0.000000e+00 1107.0
71 TraesCS4B01G137700 chr7B 89.273 867 74 8 1742 2604 561481853 561481002 0.000000e+00 1068.0
72 TraesCS4B01G137700 chr7B 85.185 891 79 32 1413 2282 46021709 46020851 0.000000e+00 865.0
73 TraesCS4B01G137700 chr7B 79.167 504 53 24 7530 7988 617552177 617552673 1.300000e-77 302.0
74 TraesCS4B01G137700 chr7B 95.679 162 4 2 7 166 49366761 49366921 2.860000e-64 257.0
75 TraesCS4B01G137700 chr7B 87.500 96 9 2 2600 2695 257657743 257657835 3.050000e-19 108.0
76 TraesCS4B01G137700 chr1B 85.179 587 73 8 1653 2226 297477928 297478513 2.480000e-164 590.0
77 TraesCS4B01G137700 chr1B 93.830 389 22 2 1412 1800 467743784 467744170 1.160000e-162 584.0
78 TraesCS4B01G137700 chr1B 81.579 114 10 6 7591 7694 438057866 438057754 5.140000e-12 84.2
79 TraesCS4B01G137700 chr6D 84.760 584 79 9 1631 2208 11440624 11440045 1.930000e-160 577.0
80 TraesCS4B01G137700 chr6D 94.231 52 3 0 22 73 465033421 465033472 6.650000e-11 80.5
81 TraesCS4B01G137700 chr7D 88.525 183 14 3 23 205 227408142 227407967 1.750000e-51 215.0
82 TraesCS4B01G137700 chr7D 77.974 227 29 16 7534 7739 565949820 565950046 1.090000e-23 122.0
83 TraesCS4B01G137700 chr7D 89.041 73 8 0 7145 7217 97945334 97945262 3.070000e-14 91.6
84 TraesCS4B01G137700 chr7D 84.615 91 14 0 7127 7217 276126817 276126907 3.070000e-14 91.6
85 TraesCS4B01G137700 chr7D 88.235 68 7 1 7580 7647 633815336 633815402 6.650000e-11 80.5
86 TraesCS4B01G137700 chr5D 91.803 122 8 2 28 147 478460446 478460325 1.380000e-37 169.0
87 TraesCS4B01G137700 chr5D 81.910 199 21 7 7556 7739 444340908 444341106 3.860000e-33 154.0
88 TraesCS4B01G137700 chr5D 78.414 227 32 5 7524 7734 362661054 362661279 1.810000e-26 132.0
89 TraesCS4B01G137700 chr5D 79.032 124 14 5 7578 7690 444341093 444341215 3.090000e-09 75.0
90 TraesCS4B01G137700 chr3D 83.234 167 26 2 7126 7291 631786 631951 1.390000e-32 152.0
91 TraesCS4B01G137700 chr1A 81.928 166 25 4 331 492 418351711 418351875 1.400000e-27 135.0
92 TraesCS4B01G137700 chr1A 80.165 121 11 5 7586 7694 418617121 418617240 2.390000e-10 78.7
93 TraesCS4B01G137700 chr1D 79.429 175 23 5 331 492 372555161 372555335 2.360000e-20 111.0
94 TraesCS4B01G137700 chr1D 80.000 135 16 8 7585 7710 101144084 101143952 1.100000e-13 89.8
95 TraesCS4B01G137700 chr2D 94.444 72 2 2 20 90 2566513 2566443 8.480000e-20 110.0
96 TraesCS4B01G137700 chr6A 75.285 263 35 17 7698 7956 430868553 430868789 1.830000e-16 99.0
97 TraesCS4B01G137700 chr6A 80.328 122 17 7 7597 7715 408038579 408038462 1.430000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G137700 chr4B 181514674 181522661 7987 True 14752.0 14752 100.000000 1 7988 1 chr4B.!!$R2 7987
1 TraesCS4B01G137700 chr4B 636972077 636973827 1750 False 1832.0 1832 85.843000 2603 4341 1 chr4B.!!$F5 1738
2 TraesCS4B01G137700 chr4B 517962221 517963528 1307 False 1718.0 1718 90.674000 3362 4670 1 chr4B.!!$F4 1308
3 TraesCS4B01G137700 chr4B 146481640 146482809 1169 True 1332.0 1332 87.489000 3493 4653 1 chr4B.!!$R1 1160
4 TraesCS4B01G137700 chr4B 453248997 453249840 843 False 1110.0 1110 90.278000 1742 2604 1 chr4B.!!$F3 862
5 TraesCS4B01G137700 chr4B 300803730 300804359 629 False 933.0 933 93.178000 1960 2604 1 chr4B.!!$F2 644
6 TraesCS4B01G137700 chr4D 119364146 119370386 6240 True 1821.0 4106 89.778333 231 7117 3 chr4D.!!$R3 6886
7 TraesCS4B01G137700 chr4D 311901170 311901787 617 False 680.0 680 86.998000 7309 7913 1 chr4D.!!$F2 604
8 TraesCS4B01G137700 chr4A 453676068 453679330 3262 False 2469.5 4004 92.053500 601 7114 2 chr4A.!!$F2 6513
9 TraesCS4B01G137700 chr4A 242890035 242892431 2396 True 1426.0 2257 90.281500 1427 4671 2 chr4A.!!$R1 3244
10 TraesCS4B01G137700 chrUn 39708696 39710764 2068 False 2470.0 2470 88.436000 2603 4672 1 chrUn.!!$F1 2069
11 TraesCS4B01G137700 chrUn 384233784 384235139 1355 True 1380.0 1380 85.253000 2603 3946 1 chrUn.!!$R1 1343
12 TraesCS4B01G137700 chr6B 139459198 139461248 2050 True 2435.0 2435 88.454000 2653 4671 1 chr6B.!!$R1 2018
13 TraesCS4B01G137700 chr6B 615261598 615263291 1693 False 2132.0 2132 89.726000 2998 4668 1 chr6B.!!$F5 1670
14 TraesCS4B01G137700 chr6B 28218505 28220011 1506 False 1832.0 1832 89.027000 3118 4603 1 chr6B.!!$F1 1485
15 TraesCS4B01G137700 chr6B 42501463 42502331 868 False 1179.0 1179 91.369000 1748 2604 1 chr6B.!!$F2 856
16 TraesCS4B01G137700 chr6B 462136396 462137203 807 False 1144.0 1144 92.157000 1742 2556 1 chr6B.!!$F4 814
17 TraesCS4B01G137700 chr3B 322297614 322299050 1436 True 1783.0 1783 89.532000 3192 4597 1 chr3B.!!$R3 1405
18 TraesCS4B01G137700 chr3B 44764264 44765697 1433 False 1701.0 1701 88.480000 3118 4540 1 chr3B.!!$F1 1422
19 TraesCS4B01G137700 chr3B 254188801 254191236 2435 True 1508.5 2427 91.110000 1415 4670 2 chr3B.!!$R5 3255
20 TraesCS4B01G137700 chr3B 64545277 64546641 1364 True 1288.0 1288 84.003000 2603 3946 1 chr3B.!!$R1 1343
21 TraesCS4B01G137700 chr3B 819489543 819490418 875 False 1201.0 1201 91.667000 1742 2604 1 chr3B.!!$F2 862
22 TraesCS4B01G137700 chr3B 367840628 367841377 749 True 992.0 992 90.695000 1854 2604 1 chr3B.!!$R4 750
23 TraesCS4B01G137700 chr5A 397151384 397153455 2071 False 2167.0 2167 85.843000 2603 4670 1 chr5A.!!$F3 2067
24 TraesCS4B01G137700 chr5A 266406121 266407833 1712 False 1546.0 1546 83.362000 2603 4298 1 chr5A.!!$F2 1695
25 TraesCS4B01G137700 chr5A 616400487 616402895 2408 True 1423.5 2257 90.644500 1427 4671 2 chr5A.!!$R3 3244
26 TraesCS4B01G137700 chr5A 36821051 36821871 820 False 1212.0 1212 93.333000 2653 3474 1 chr5A.!!$F1 821
27 TraesCS4B01G137700 chr3A 33831532 33833623 2091 True 2202.0 2202 85.978000 2603 4670 1 chr3A.!!$R2 2067
28 TraesCS4B01G137700 chr2B 97937790 97939611 1821 False 2176.0 2176 88.541000 2866 4671 1 chr2B.!!$F1 1805
29 TraesCS4B01G137700 chr2B 103898430 103899713 1283 False 1655.0 1655 90.410000 3158 4409 1 chr2B.!!$F2 1251
30 TraesCS4B01G137700 chr2B 250276685 250279292 2607 False 1299.5 2006 92.392000 1413 4670 2 chr2B.!!$F3 3257
31 TraesCS4B01G137700 chr2B 263816920 263817437 517 True 686.0 686 90.927000 2099 2604 1 chr2B.!!$R1 505
32 TraesCS4B01G137700 chr2B 372369142 372369822 680 True 303.0 303 76.058000 7358 7988 1 chr2B.!!$R2 630
33 TraesCS4B01G137700 chr7A 514820065 514822183 2118 False 2145.0 2145 85.460000 2603 4671 1 chr7A.!!$F1 2068
34 TraesCS4B01G137700 chr2A 428142819 428144936 2117 True 2060.0 2060 84.802000 2603 4670 1 chr2A.!!$R1 2067
35 TraesCS4B01G137700 chr5B 601350564 601352196 1632 False 2049.0 2049 89.649000 3060 4670 1 chr5B.!!$F2 1610
36 TraesCS4B01G137700 chr5B 440553915 440555369 1454 False 1775.0 1775 88.955000 3206 4674 1 chr5B.!!$F1 1468
37 TraesCS4B01G137700 chr5B 196241267 196242122 855 True 1234.0 1234 92.832000 1752 2604 1 chr5B.!!$R1 852
38 TraesCS4B01G137700 chr7B 31791903 31793521 1618 True 1821.0 1821 87.372000 2998 4605 1 chr7B.!!$R1 1607
39 TraesCS4B01G137700 chr7B 697046688 697048009 1321 False 1786.0 1786 91.369000 3180 4487 1 chr7B.!!$F6 1307
40 TraesCS4B01G137700 chr7B 188938907 188940362 1455 False 1406.0 1406 84.651000 3158 4597 1 chr7B.!!$F2 1439
41 TraesCS4B01G137700 chr7B 744010334 744011698 1364 False 1310.0 1310 84.318000 2603 3946 1 chr7B.!!$F7 1343
42 TraesCS4B01G137700 chr7B 285449575 285450370 795 False 1107.0 1107 91.750000 1742 2539 1 chr7B.!!$F4 797
43 TraesCS4B01G137700 chr7B 561481002 561481853 851 True 1068.0 1068 89.273000 1742 2604 1 chr7B.!!$R3 862
44 TraesCS4B01G137700 chr7B 46020851 46021709 858 True 865.0 865 85.185000 1413 2282 1 chr7B.!!$R2 869
45 TraesCS4B01G137700 chr1B 297477928 297478513 585 False 590.0 590 85.179000 1653 2226 1 chr1B.!!$F1 573
46 TraesCS4B01G137700 chr6D 11440045 11440624 579 True 577.0 577 84.760000 1631 2208 1 chr6D.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
587 3187 0.032952 TGTGTTGTAGTCGAGGTGGC 59.967 55.000 0.00 0.0 0.00 5.01 F
714 3322 0.259356 CCGTCCCCTCTTACCTCTCT 59.741 60.000 0.00 0.0 0.00 3.10 F
1720 4364 0.396695 CCTTCCCCTACTGCCTACGA 60.397 60.000 0.00 0.0 0.00 3.43 F
2251 4908 1.691976 CAGTATGGGATGCCCTACGAA 59.308 52.381 11.98 0.0 45.70 3.85 F
2583 5240 2.747855 GGGCAGCGACCTCAAAGG 60.748 66.667 0.00 0.0 42.49 3.11 F
2720 5380 3.322466 CCAACTCCTCCACCGCCT 61.322 66.667 0.00 0.0 0.00 5.52 F
4122 7049 1.066002 TGCTTCAACTGCTTCAACTGC 59.934 47.619 0.00 0.0 0.00 4.40 F
4705 7672 0.536724 AAGGAATTGAATTGGGCCGC 59.463 50.000 0.00 0.0 0.00 6.53 F
5370 8341 0.321919 TCTGCAGAGTTGGATGGCAC 60.322 55.000 13.74 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2349 5006 0.035820 GTGGTGGGTAGCGATCCAAA 60.036 55.000 0.00 0.00 37.69 3.28 R
2548 5205 0.893270 CCGTGGGGAAAACAGCATGA 60.893 55.000 0.00 0.00 35.37 3.07 R
2879 5548 1.202639 ACGACCAAGTCATTGAGCACA 60.203 47.619 0.00 0.00 38.83 4.57 R
3891 6800 0.031616 GACTGGAGATCCTGGGGTCT 60.032 60.000 1.52 1.52 39.04 3.85 R
4114 7041 1.529152 TAGGGCTCGTCGCAGTTGAA 61.529 55.000 2.27 0.00 41.67 2.69 R
4154 7081 1.683629 CCTCCAGGTAGAAGAGTCGCT 60.684 57.143 0.00 0.00 0.00 4.93 R
4948 7916 1.303282 GACCACAGGGGCCTTTAGG 59.697 63.158 0.84 2.05 42.05 2.69 R
6492 9480 0.107654 GATCACCCTGGAGAAACCCG 60.108 60.000 0.00 0.00 38.00 5.28 R
7273 10262 0.107945 GTCTCACTGACAGATGGGGC 60.108 60.000 10.08 1.55 44.73 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.189257 AGCACACACACTTGCGGA 59.811 55.556 0.00 0.00 43.87 5.54
18 19 1.451207 AGCACACACACTTGCGGAA 60.451 52.632 0.00 0.00 43.87 4.30
19 20 1.009675 GCACACACACTTGCGGAAG 60.010 57.895 15.80 15.80 35.07 3.46
31 32 3.642078 CGGAAGCCTGGGTATGGA 58.358 61.111 0.00 0.00 0.00 3.41
32 33 1.146263 CGGAAGCCTGGGTATGGAC 59.854 63.158 0.00 0.00 0.00 4.02
33 34 1.338136 CGGAAGCCTGGGTATGGACT 61.338 60.000 0.00 0.00 0.00 3.85
34 35 0.919710 GGAAGCCTGGGTATGGACTT 59.080 55.000 0.00 0.00 0.00 3.01
35 36 2.124411 GGAAGCCTGGGTATGGACTTA 58.876 52.381 0.00 0.00 0.00 2.24
36 37 2.104963 GGAAGCCTGGGTATGGACTTAG 59.895 54.545 0.00 0.00 0.00 2.18
37 38 2.868964 AGCCTGGGTATGGACTTAGA 57.131 50.000 0.00 0.00 0.00 2.10
38 39 3.130734 AGCCTGGGTATGGACTTAGAA 57.869 47.619 0.00 0.00 0.00 2.10
39 40 3.460825 AGCCTGGGTATGGACTTAGAAA 58.539 45.455 0.00 0.00 0.00 2.52
40 41 3.850173 AGCCTGGGTATGGACTTAGAAAA 59.150 43.478 0.00 0.00 0.00 2.29
41 42 3.945921 GCCTGGGTATGGACTTAGAAAAC 59.054 47.826 0.00 0.00 0.00 2.43
42 43 4.566907 GCCTGGGTATGGACTTAGAAAACA 60.567 45.833 0.00 0.00 0.00 2.83
43 44 5.566469 CCTGGGTATGGACTTAGAAAACAA 58.434 41.667 0.00 0.00 0.00 2.83
44 45 5.414765 CCTGGGTATGGACTTAGAAAACAAC 59.585 44.000 0.00 0.00 0.00 3.32
45 46 6.195600 TGGGTATGGACTTAGAAAACAACT 57.804 37.500 0.00 0.00 0.00 3.16
46 47 7.319052 TGGGTATGGACTTAGAAAACAACTA 57.681 36.000 0.00 0.00 0.00 2.24
47 48 7.747690 TGGGTATGGACTTAGAAAACAACTAA 58.252 34.615 0.00 0.00 0.00 2.24
48 49 7.662669 TGGGTATGGACTTAGAAAACAACTAAC 59.337 37.037 0.00 0.00 0.00 2.34
49 50 7.881751 GGGTATGGACTTAGAAAACAACTAACT 59.118 37.037 0.00 0.00 0.00 2.24
50 51 9.933723 GGTATGGACTTAGAAAACAACTAACTA 57.066 33.333 0.00 0.00 0.00 2.24
54 55 9.280174 TGGACTTAGAAAACAACTAACTAATGG 57.720 33.333 0.00 0.00 0.00 3.16
55 56 8.727910 GGACTTAGAAAACAACTAACTAATGGG 58.272 37.037 0.00 0.00 0.00 4.00
56 57 8.107399 ACTTAGAAAACAACTAACTAATGGGC 57.893 34.615 0.00 0.00 0.00 5.36
57 58 7.942894 ACTTAGAAAACAACTAACTAATGGGCT 59.057 33.333 0.00 0.00 0.00 5.19
58 59 8.700439 TTAGAAAACAACTAACTAATGGGCTT 57.300 30.769 0.00 0.00 0.00 4.35
59 60 6.981722 AGAAAACAACTAACTAATGGGCTTG 58.018 36.000 0.00 0.00 0.00 4.01
60 61 6.549736 AGAAAACAACTAACTAATGGGCTTGT 59.450 34.615 0.00 0.00 0.00 3.16
61 62 7.722285 AGAAAACAACTAACTAATGGGCTTGTA 59.278 33.333 0.00 0.00 0.00 2.41
62 63 6.812879 AACAACTAACTAATGGGCTTGTAC 57.187 37.500 0.00 0.00 0.00 2.90
63 64 4.933400 ACAACTAACTAATGGGCTTGTACG 59.067 41.667 0.00 0.00 0.00 3.67
64 65 4.813750 ACTAACTAATGGGCTTGTACGT 57.186 40.909 0.00 0.00 0.00 3.57
65 66 4.501071 ACTAACTAATGGGCTTGTACGTG 58.499 43.478 0.00 0.00 0.00 4.49
66 67 2.396590 ACTAATGGGCTTGTACGTGG 57.603 50.000 0.00 0.00 0.00 4.94
67 68 1.065709 ACTAATGGGCTTGTACGTGGG 60.066 52.381 0.00 0.00 0.00 4.61
68 69 0.393267 TAATGGGCTTGTACGTGGGC 60.393 55.000 0.00 0.00 0.00 5.36
69 70 3.638592 ATGGGCTTGTACGTGGGCC 62.639 63.158 14.95 14.95 44.50 5.80
70 71 4.029809 GGGCTTGTACGTGGGCCT 62.030 66.667 17.55 0.00 43.62 5.19
71 72 2.033602 GGCTTGTACGTGGGCCTT 59.966 61.111 4.53 0.00 41.20 4.35
72 73 1.602605 GGCTTGTACGTGGGCCTTT 60.603 57.895 4.53 0.00 41.20 3.11
73 74 1.176619 GGCTTGTACGTGGGCCTTTT 61.177 55.000 4.53 0.00 41.20 2.27
74 75 0.671796 GCTTGTACGTGGGCCTTTTT 59.328 50.000 4.53 0.00 0.00 1.94
93 94 5.689383 TTTTTCCTTTCTCCAGAATCACG 57.311 39.130 0.00 0.00 33.54 4.35
94 95 4.351874 TTTCCTTTCTCCAGAATCACGT 57.648 40.909 0.00 0.00 33.54 4.49
95 96 5.477607 TTTCCTTTCTCCAGAATCACGTA 57.522 39.130 0.00 0.00 33.54 3.57
96 97 5.477607 TTCCTTTCTCCAGAATCACGTAA 57.522 39.130 0.00 0.00 33.54 3.18
97 98 5.477607 TCCTTTCTCCAGAATCACGTAAA 57.522 39.130 0.00 0.00 33.54 2.01
98 99 5.479306 TCCTTTCTCCAGAATCACGTAAAG 58.521 41.667 0.00 0.00 33.54 1.85
99 100 5.245301 TCCTTTCTCCAGAATCACGTAAAGA 59.755 40.000 0.00 0.00 33.54 2.52
100 101 6.070767 TCCTTTCTCCAGAATCACGTAAAGAT 60.071 38.462 0.00 0.00 33.54 2.40
101 102 7.123697 TCCTTTCTCCAGAATCACGTAAAGATA 59.876 37.037 0.00 0.00 33.54 1.98
102 103 7.436673 CCTTTCTCCAGAATCACGTAAAGATAG 59.563 40.741 0.00 0.00 33.54 2.08
103 104 6.392625 TCTCCAGAATCACGTAAAGATAGG 57.607 41.667 0.00 0.00 0.00 2.57
104 105 5.302059 TCTCCAGAATCACGTAAAGATAGGG 59.698 44.000 0.00 0.00 0.00 3.53
105 106 4.344102 TCCAGAATCACGTAAAGATAGGGG 59.656 45.833 0.00 0.00 0.00 4.79
106 107 4.503296 CCAGAATCACGTAAAGATAGGGGG 60.503 50.000 0.00 0.00 0.00 5.40
121 122 2.281900 GGGGCCAAGCACGTTGTA 60.282 61.111 4.39 0.00 33.87 2.41
122 123 2.622962 GGGGCCAAGCACGTTGTAC 61.623 63.158 4.39 0.00 33.87 2.90
138 139 5.352302 CGTTGTACGTGTAAATCATATCGC 58.648 41.667 0.00 0.00 36.74 4.58
139 140 5.172591 CGTTGTACGTGTAAATCATATCGCT 59.827 40.000 0.00 0.00 36.74 4.93
140 141 6.357766 CGTTGTACGTGTAAATCATATCGCTA 59.642 38.462 0.00 0.00 36.74 4.26
141 142 7.096925 CGTTGTACGTGTAAATCATATCGCTAA 60.097 37.037 0.00 0.00 36.74 3.09
142 143 8.697067 GTTGTACGTGTAAATCATATCGCTAAT 58.303 33.333 0.00 0.00 0.00 1.73
143 144 8.806177 TGTACGTGTAAATCATATCGCTAATT 57.194 30.769 0.00 0.00 0.00 1.40
144 145 9.896263 TGTACGTGTAAATCATATCGCTAATTA 57.104 29.630 0.00 0.00 0.00 1.40
147 148 8.706035 ACGTGTAAATCATATCGCTAATTAACC 58.294 33.333 0.00 0.00 0.00 2.85
148 149 8.705134 CGTGTAAATCATATCGCTAATTAACCA 58.295 33.333 0.00 0.00 0.00 3.67
149 150 9.807386 GTGTAAATCATATCGCTAATTAACCAC 57.193 33.333 0.00 0.00 0.00 4.16
150 151 9.772973 TGTAAATCATATCGCTAATTAACCACT 57.227 29.630 0.00 0.00 0.00 4.00
153 154 9.998106 AAATCATATCGCTAATTAACCACTACT 57.002 29.630 0.00 0.00 0.00 2.57
154 155 9.998106 AATCATATCGCTAATTAACCACTACTT 57.002 29.630 0.00 0.00 0.00 2.24
156 157 9.903682 TCATATCGCTAATTAACCACTACTTAC 57.096 33.333 0.00 0.00 0.00 2.34
157 158 9.687210 CATATCGCTAATTAACCACTACTTACA 57.313 33.333 0.00 0.00 0.00 2.41
160 161 9.609346 ATCGCTAATTAACCACTACTTACAAAT 57.391 29.630 0.00 0.00 0.00 2.32
180 181 6.427150 CAAATATTTGTTCGATCGTTAGGGG 58.573 40.000 18.32 0.00 33.59 4.79
181 182 2.389962 TTTGTTCGATCGTTAGGGGG 57.610 50.000 15.94 0.00 0.00 5.40
229 230 2.946762 GCTCCGCCAGTGTGAAAC 59.053 61.111 0.00 0.00 37.35 2.78
270 271 2.134346 ACAATGCACGGACATTTTTGC 58.866 42.857 2.74 0.00 38.19 3.68
273 274 3.932545 ATGCACGGACATTTTTGCTAA 57.067 38.095 0.00 0.00 35.91 3.09
298 300 7.764141 TTTATACTAAGGGGTTGTTTGGTTC 57.236 36.000 0.00 0.00 0.00 3.62
302 304 4.661709 ACTAAGGGGTTGTTTGGTTCTAGA 59.338 41.667 0.00 0.00 0.00 2.43
329 331 3.066621 ACAATGCCATACTTTGCCATACG 59.933 43.478 0.00 0.00 37.01 3.06
348 360 3.922910 ACGACTTGGCTAAGGTTAGTTC 58.077 45.455 14.86 0.51 38.26 3.01
351 363 4.626172 CGACTTGGCTAAGGTTAGTTCTTC 59.374 45.833 14.86 0.00 38.26 2.87
357 369 8.927675 TTGGCTAAGGTTAGTTCTTCAAAATA 57.072 30.769 0.00 0.00 33.32 1.40
358 370 8.927675 TGGCTAAGGTTAGTTCTTCAAAATAA 57.072 30.769 0.00 0.00 33.32 1.40
359 371 9.357161 TGGCTAAGGTTAGTTCTTCAAAATAAA 57.643 29.630 0.00 0.00 33.32 1.40
369 381 7.555965 AGTTCTTCAAAATAAAAGCCACAAGT 58.444 30.769 0.00 0.00 0.00 3.16
374 386 5.746245 TCAAAATAAAAGCCACAAGTTGACG 59.254 36.000 10.54 0.00 0.00 4.35
375 387 3.915437 ATAAAAGCCACAAGTTGACGG 57.085 42.857 10.54 10.56 0.00 4.79
376 388 0.744281 AAAAGCCACAAGTTGACGGG 59.256 50.000 10.54 9.04 0.00 5.28
377 389 0.395173 AAAGCCACAAGTTGACGGGT 60.395 50.000 10.54 11.99 0.00 5.28
383 395 2.413837 CACAAGTTGACGGGTCTAAGG 58.586 52.381 10.54 0.00 0.00 2.69
388 400 2.500504 AGTTGACGGGTCTAAGGGAATC 59.499 50.000 0.00 0.00 0.00 2.52
392 404 2.500504 GACGGGTCTAAGGGAATCTTGT 59.499 50.000 0.00 0.00 36.93 3.16
397 409 4.080299 GGGTCTAAGGGAATCTTGTCACAT 60.080 45.833 0.00 0.00 36.93 3.21
424 436 9.976776 TTTTTAAGTGTATGTAATATGGGGTCA 57.023 29.630 0.00 0.00 0.00 4.02
428 440 7.496346 AGTGTATGTAATATGGGGTCATAGG 57.504 40.000 0.00 0.00 39.02 2.57
436 448 1.227383 GGGGTCATAGGGTGGCTTG 59.773 63.158 0.00 0.00 31.47 4.01
442 454 3.432326 GGTCATAGGGTGGCTTGACTAAG 60.432 52.174 0.00 0.00 38.76 2.18
461 473 4.552166 AAGGTGTGACTTGAATCAAACG 57.448 40.909 0.00 0.00 37.66 3.60
462 474 2.290641 AGGTGTGACTTGAATCAAACGC 59.709 45.455 0.00 0.00 37.66 4.84
500 517 7.739498 TCAAACTTCAACCTTATGTTAGTCC 57.261 36.000 0.00 0.00 34.69 3.85
504 521 6.790319 ACTTCAACCTTATGTTAGTCCCAAT 58.210 36.000 0.00 0.00 34.69 3.16
510 527 5.949952 ACCTTATGTTAGTCCCAATCCAAAC 59.050 40.000 0.00 0.00 0.00 2.93
513 530 3.153919 TGTTAGTCCCAATCCAAACAGC 58.846 45.455 0.00 0.00 0.00 4.40
535 552 4.563782 CCCCCTAAATCAGTTAGTCCCTA 58.436 47.826 0.00 0.00 38.03 3.53
536 553 4.347292 CCCCCTAAATCAGTTAGTCCCTAC 59.653 50.000 0.00 0.00 38.03 3.18
537 554 5.217400 CCCCTAAATCAGTTAGTCCCTACT 58.783 45.833 0.00 0.00 38.03 2.57
553 570 7.237255 AGTCCCTACTACACAGTAAAGTTAGT 58.763 38.462 0.00 0.00 36.81 2.24
555 572 6.372659 TCCCTACTACACAGTAAAGTTAGTCG 59.627 42.308 0.00 0.00 36.81 4.18
556 573 6.404074 CCCTACTACACAGTAAAGTTAGTCGG 60.404 46.154 0.00 0.00 36.81 4.79
557 574 6.372659 CCTACTACACAGTAAAGTTAGTCGGA 59.627 42.308 0.00 0.00 36.81 4.55
558 575 6.251655 ACTACACAGTAAAGTTAGTCGGAG 57.748 41.667 0.00 0.00 31.45 4.63
559 576 4.516365 ACACAGTAAAGTTAGTCGGAGG 57.484 45.455 0.00 0.00 0.00 4.30
560 577 3.257624 ACACAGTAAAGTTAGTCGGAGGG 59.742 47.826 0.00 0.00 0.00 4.30
561 578 2.830321 ACAGTAAAGTTAGTCGGAGGGG 59.170 50.000 0.00 0.00 0.00 4.79
562 579 2.167900 CAGTAAAGTTAGTCGGAGGGGG 59.832 54.545 0.00 0.00 0.00 5.40
563 580 2.043526 AGTAAAGTTAGTCGGAGGGGGA 59.956 50.000 0.00 0.00 0.00 4.81
565 582 2.265526 AAGTTAGTCGGAGGGGGATT 57.734 50.000 0.00 0.00 0.00 3.01
566 583 2.265526 AGTTAGTCGGAGGGGGATTT 57.734 50.000 0.00 0.00 0.00 2.17
568 585 3.937751 AGTTAGTCGGAGGGGGATTTAT 58.062 45.455 0.00 0.00 0.00 1.40
571 588 1.768870 AGTCGGAGGGGGATTTATGTG 59.231 52.381 0.00 0.00 0.00 3.21
572 589 1.489230 GTCGGAGGGGGATTTATGTGT 59.511 52.381 0.00 0.00 0.00 3.72
573 590 2.092592 GTCGGAGGGGGATTTATGTGTT 60.093 50.000 0.00 0.00 0.00 3.32
586 3186 2.743636 ATGTGTTGTAGTCGAGGTGG 57.256 50.000 0.00 0.00 0.00 4.61
587 3187 0.032952 TGTGTTGTAGTCGAGGTGGC 59.967 55.000 0.00 0.00 0.00 5.01
705 3313 3.341629 TACCGTCCCGTCCCCTCT 61.342 66.667 0.00 0.00 0.00 3.69
706 3314 2.850828 CTACCGTCCCGTCCCCTCTT 62.851 65.000 0.00 0.00 0.00 2.85
707 3315 1.570857 TACCGTCCCGTCCCCTCTTA 61.571 60.000 0.00 0.00 0.00 2.10
708 3316 2.421399 CCGTCCCGTCCCCTCTTAC 61.421 68.421 0.00 0.00 0.00 2.34
709 3317 2.421399 CGTCCCGTCCCCTCTTACC 61.421 68.421 0.00 0.00 0.00 2.85
710 3318 1.001376 GTCCCGTCCCCTCTTACCT 59.999 63.158 0.00 0.00 0.00 3.08
711 3319 1.042003 GTCCCGTCCCCTCTTACCTC 61.042 65.000 0.00 0.00 0.00 3.85
712 3320 1.219824 TCCCGTCCCCTCTTACCTCT 61.220 60.000 0.00 0.00 0.00 3.69
713 3321 0.756070 CCCGTCCCCTCTTACCTCTC 60.756 65.000 0.00 0.00 0.00 3.20
714 3322 0.259356 CCGTCCCCTCTTACCTCTCT 59.741 60.000 0.00 0.00 0.00 3.10
715 3323 1.682740 CGTCCCCTCTTACCTCTCTC 58.317 60.000 0.00 0.00 0.00 3.20
725 3333 2.609609 TACCTCTCTCCTACCTCCCT 57.390 55.000 0.00 0.00 0.00 4.20
861 3469 2.048127 GGCCAGTCCGTCTGTCAC 60.048 66.667 0.00 0.00 42.19 3.67
952 3560 4.291783 GTCCTCTCAATCCGTATTCTTCG 58.708 47.826 0.00 0.00 0.00 3.79
1034 3642 1.365028 ACAGGGAGGGCCTTCTACTTA 59.635 52.381 15.38 0.00 0.00 2.24
1126 3753 4.331168 CCTTGAAGATTTCGATGTGAGTCC 59.669 45.833 0.00 0.00 0.00 3.85
1148 3775 7.344093 AGTCCCTTAGGAATTTAGTACTGGTAC 59.656 40.741 5.39 2.97 46.38 3.34
1240 3877 6.027749 CGTGCCATAATAAACCTGAACTTTC 58.972 40.000 0.00 0.00 0.00 2.62
1264 3904 3.610260 ACCCCTTATCCTTATCCTTCCC 58.390 50.000 0.00 0.00 0.00 3.97
1579 4221 9.447157 GCAATAAGAAGATTATCTCTATTGCCT 57.553 33.333 26.06 3.14 42.06 4.75
1720 4364 0.396695 CCTTCCCCTACTGCCTACGA 60.397 60.000 0.00 0.00 0.00 3.43
1935 4580 4.176752 GGAGATGTCCGGGGTGCC 62.177 72.222 0.00 0.00 31.37 5.01
1971 4616 2.435693 CGGTCCAGGAGATCCACCC 61.436 68.421 0.92 0.00 38.89 4.61
2157 4802 4.767255 GCTGCAGTGGTAGCCGCT 62.767 66.667 16.64 0.00 45.77 5.52
2251 4908 1.691976 CAGTATGGGATGCCCTACGAA 59.308 52.381 11.98 0.00 45.70 3.85
2583 5240 2.747855 GGGCAGCGACCTCAAAGG 60.748 66.667 0.00 0.00 42.49 3.11
2698 5358 4.988598 AACTCCACCACCGCAGCG 62.989 66.667 8.18 8.18 0.00 5.18
2711 5371 4.335647 CAGCGGCCACCAACTCCT 62.336 66.667 2.24 0.00 0.00 3.69
2720 5380 3.322466 CCAACTCCTCCACCGCCT 61.322 66.667 0.00 0.00 0.00 5.52
2731 5391 4.162690 ACCGCCTCCGCTTCATCC 62.163 66.667 0.00 0.00 0.00 3.51
3218 6088 4.954970 CAGTTGCCACCACCGCCT 62.955 66.667 0.00 0.00 0.00 5.52
3891 6800 3.666253 TCGACGTGGAGCTTCGCA 61.666 61.111 6.34 0.00 38.53 5.10
4119 7046 2.849880 TGTGCTTCAACTGCTTCAAC 57.150 45.000 0.00 0.00 0.00 3.18
4120 7047 2.368439 TGTGCTTCAACTGCTTCAACT 58.632 42.857 0.00 0.00 0.00 3.16
4121 7048 2.097954 TGTGCTTCAACTGCTTCAACTG 59.902 45.455 0.00 0.00 0.00 3.16
4122 7049 1.066002 TGCTTCAACTGCTTCAACTGC 59.934 47.619 0.00 0.00 0.00 4.40
4195 7122 1.847328 TGCAGACTACATTCCGGAGA 58.153 50.000 3.34 0.00 0.00 3.71
4673 7640 0.691413 ACCCTAGCTCCTAACAGCCC 60.691 60.000 0.00 0.00 40.65 5.19
4674 7641 1.742768 CCTAGCTCCTAACAGCCCG 59.257 63.158 0.00 0.00 40.65 6.13
4675 7642 1.043673 CCTAGCTCCTAACAGCCCGT 61.044 60.000 0.00 0.00 40.65 5.28
4700 7667 6.434028 TCACTAGGTGAAAGGAATTGAATTGG 59.566 38.462 0.00 0.00 39.78 3.16
4705 7672 0.536724 AAGGAATTGAATTGGGCCGC 59.463 50.000 0.00 0.00 0.00 6.53
4714 7681 1.250840 AATTGGGCCGCTTCAAGTCC 61.251 55.000 0.00 0.00 0.00 3.85
4715 7682 4.697756 TGGGCCGCTTCAAGTCCG 62.698 66.667 0.00 0.00 0.00 4.79
4728 7695 1.726791 CAAGTCCGGAGTTGACATTCG 59.273 52.381 38.14 15.99 42.77 3.34
4746 7713 3.363341 TCGTTTCACAAGGAAATTGGC 57.637 42.857 0.00 0.00 46.55 4.52
4756 7723 1.918957 AGGAAATTGGCCTGCTACTCT 59.081 47.619 3.32 0.00 33.59 3.24
4786 7754 5.417029 CATTTTATGCAACGCGAATGATTG 58.583 37.500 15.93 7.70 0.00 2.67
4836 7804 2.433868 ACTTGCTTGATACGTCGTGT 57.566 45.000 8.47 0.00 0.00 4.49
4883 7851 2.036346 AGCCAAGTTGCCAAGTGATTTC 59.964 45.455 0.00 0.00 0.00 2.17
4920 7888 0.953960 GCCAGGACAGGGTTGTTACG 60.954 60.000 0.00 0.00 37.76 3.18
5281 8252 9.931698 TCTTTACTCTCTATTACAGGAATACCA 57.068 33.333 0.00 0.00 38.94 3.25
5350 8321 0.392327 GGCCTGCTCTTCAGACTTCC 60.392 60.000 0.00 0.00 45.72 3.46
5370 8341 0.321919 TCTGCAGAGTTGGATGGCAC 60.322 55.000 13.74 0.00 0.00 5.01
5896 8871 5.542635 TGTTAGTTCCAGGTTAGTCTGATGT 59.457 40.000 0.00 0.00 36.93 3.06
6080 9057 7.797038 GGTACTTACCTATATTGGTTTGTGG 57.203 40.000 14.21 3.85 43.10 4.17
6300 9277 2.890945 GACAAGGTTGCAGGTTTGGTAT 59.109 45.455 9.85 0.00 0.00 2.73
6314 9291 3.730215 TTGGTATTAGCTCAAAGCCCA 57.270 42.857 0.00 0.00 43.77 5.36
6556 9544 7.280876 TGACATATGAAAGGAGGAAAGAATTCG 59.719 37.037 10.38 0.00 36.36 3.34
6936 9924 0.247185 AAGCTCTGCTGACTCTGCTC 59.753 55.000 9.11 0.00 39.62 4.26
7110 10099 7.333921 AGCTGATCTTTATGCATATACTTCTGC 59.666 37.037 7.36 15.88 38.87 4.26
7156 10145 8.789825 ATATCATCAGGAATCATAGAACTTGC 57.210 34.615 0.00 0.00 0.00 4.01
7157 10146 5.052481 TCATCAGGAATCATAGAACTTGCG 58.948 41.667 0.00 0.00 0.00 4.85
7158 10147 4.471904 TCAGGAATCATAGAACTTGCGT 57.528 40.909 0.00 0.00 0.00 5.24
7159 10148 4.433615 TCAGGAATCATAGAACTTGCGTC 58.566 43.478 0.00 0.00 0.00 5.19
7160 10149 3.243877 CAGGAATCATAGAACTTGCGTCG 59.756 47.826 0.00 0.00 0.00 5.12
7161 10150 3.119101 AGGAATCATAGAACTTGCGTCGT 60.119 43.478 0.00 0.00 0.00 4.34
7162 10151 4.097437 AGGAATCATAGAACTTGCGTCGTA 59.903 41.667 0.00 0.00 0.00 3.43
7163 10152 4.982916 GGAATCATAGAACTTGCGTCGTAT 59.017 41.667 0.00 0.00 0.00 3.06
7164 10153 5.107837 GGAATCATAGAACTTGCGTCGTATG 60.108 44.000 0.00 0.00 0.00 2.39
7165 10154 4.365899 TCATAGAACTTGCGTCGTATGT 57.634 40.909 0.00 0.00 0.00 2.29
7166 10155 4.740268 TCATAGAACTTGCGTCGTATGTT 58.260 39.130 13.09 13.09 0.00 2.71
7167 10156 5.165676 TCATAGAACTTGCGTCGTATGTTT 58.834 37.500 14.12 8.28 0.00 2.83
7168 10157 6.324042 TCATAGAACTTGCGTCGTATGTTTA 58.676 36.000 14.12 9.72 0.00 2.01
7169 10158 6.471198 TCATAGAACTTGCGTCGTATGTTTAG 59.529 38.462 14.12 6.79 0.00 1.85
7170 10159 4.553323 AGAACTTGCGTCGTATGTTTAGT 58.447 39.130 14.12 0.00 0.00 2.24
7171 10160 4.986659 AGAACTTGCGTCGTATGTTTAGTT 59.013 37.500 14.12 6.56 0.00 2.24
7172 10161 5.464389 AGAACTTGCGTCGTATGTTTAGTTT 59.536 36.000 14.12 0.00 0.00 2.66
7173 10162 5.013861 ACTTGCGTCGTATGTTTAGTTTG 57.986 39.130 0.00 0.00 0.00 2.93
7174 10163 4.084223 ACTTGCGTCGTATGTTTAGTTTGG 60.084 41.667 0.00 0.00 0.00 3.28
7175 10164 3.391965 TGCGTCGTATGTTTAGTTTGGT 58.608 40.909 0.00 0.00 0.00 3.67
7176 10165 3.184783 TGCGTCGTATGTTTAGTTTGGTG 59.815 43.478 0.00 0.00 0.00 4.17
7177 10166 3.728600 CGTCGTATGTTTAGTTTGGTGC 58.271 45.455 0.00 0.00 0.00 5.01
7178 10167 3.430895 CGTCGTATGTTTAGTTTGGTGCT 59.569 43.478 0.00 0.00 0.00 4.40
7179 10168 4.622313 CGTCGTATGTTTAGTTTGGTGCTA 59.378 41.667 0.00 0.00 0.00 3.49
7180 10169 5.443693 CGTCGTATGTTTAGTTTGGTGCTAC 60.444 44.000 0.00 0.00 0.00 3.58
7181 10170 5.406175 GTCGTATGTTTAGTTTGGTGCTACA 59.594 40.000 0.00 0.00 0.00 2.74
7182 10171 5.990386 TCGTATGTTTAGTTTGGTGCTACAA 59.010 36.000 0.00 0.00 0.00 2.41
7183 10172 6.073657 TCGTATGTTTAGTTTGGTGCTACAAC 60.074 38.462 0.00 0.00 0.00 3.32
7184 10173 6.073440 CGTATGTTTAGTTTGGTGCTACAACT 60.073 38.462 0.00 0.00 0.00 3.16
7185 10174 6.709018 ATGTTTAGTTTGGTGCTACAACTT 57.291 33.333 0.00 0.00 0.00 2.66
7186 10175 6.518208 TGTTTAGTTTGGTGCTACAACTTT 57.482 33.333 0.00 0.00 0.00 2.66
7187 10176 7.627298 TGTTTAGTTTGGTGCTACAACTTTA 57.373 32.000 0.00 0.00 0.00 1.85
7188 10177 8.053026 TGTTTAGTTTGGTGCTACAACTTTAA 57.947 30.769 0.00 0.00 0.00 1.52
7189 10178 8.521176 TGTTTAGTTTGGTGCTACAACTTTAAA 58.479 29.630 0.00 0.00 0.00 1.52
7190 10179 9.356433 GTTTAGTTTGGTGCTACAACTTTAAAA 57.644 29.630 0.00 0.00 0.00 1.52
7191 10180 9.924650 TTTAGTTTGGTGCTACAACTTTAAAAA 57.075 25.926 0.00 0.00 0.00 1.94
7194 10183 9.524106 AGTTTGGTGCTACAACTTTAAAAATAC 57.476 29.630 0.00 0.00 0.00 1.89
7195 10184 9.303537 GTTTGGTGCTACAACTTTAAAAATACA 57.696 29.630 0.00 0.00 0.00 2.29
7196 10185 9.522804 TTTGGTGCTACAACTTTAAAAATACAG 57.477 29.630 0.00 0.00 0.00 2.74
7197 10186 7.653647 TGGTGCTACAACTTTAAAAATACAGG 58.346 34.615 0.00 0.00 0.00 4.00
7198 10187 7.285858 TGGTGCTACAACTTTAAAAATACAGGT 59.714 33.333 0.00 0.00 0.00 4.00
7199 10188 8.139350 GGTGCTACAACTTTAAAAATACAGGTT 58.861 33.333 0.00 0.00 0.00 3.50
7200 10189 9.524106 GTGCTACAACTTTAAAAATACAGGTTT 57.476 29.630 0.00 0.00 0.00 3.27
7201 10190 9.522804 TGCTACAACTTTAAAAATACAGGTTTG 57.477 29.630 0.00 0.00 0.00 2.93
7202 10191 9.524106 GCTACAACTTTAAAAATACAGGTTTGT 57.476 29.630 0.00 0.00 41.39 2.83
7204 10193 8.710835 ACAACTTTAAAAATACAGGTTTGTGG 57.289 30.769 0.00 0.00 38.23 4.17
7205 10194 8.315482 ACAACTTTAAAAATACAGGTTTGTGGT 58.685 29.630 0.00 0.00 38.23 4.16
7206 10195 8.813282 CAACTTTAAAAATACAGGTTTGTGGTC 58.187 33.333 0.00 0.00 38.23 4.02
7207 10196 8.068892 ACTTTAAAAATACAGGTTTGTGGTCA 57.931 30.769 0.00 0.00 38.23 4.02
7208 10197 8.700973 ACTTTAAAAATACAGGTTTGTGGTCAT 58.299 29.630 0.00 0.00 38.23 3.06
7209 10198 9.541143 CTTTAAAAATACAGGTTTGTGGTCATT 57.459 29.630 0.00 0.00 38.23 2.57
7210 10199 9.892130 TTTAAAAATACAGGTTTGTGGTCATTT 57.108 25.926 0.00 0.00 38.23 2.32
7213 10202 8.880878 AAAATACAGGTTTGTGGTCATTTAAC 57.119 30.769 0.00 0.00 38.23 2.01
7214 10203 7.833285 AATACAGGTTTGTGGTCATTTAACT 57.167 32.000 0.00 0.00 38.23 2.24
7215 10204 7.833285 ATACAGGTTTGTGGTCATTTAACTT 57.167 32.000 0.00 0.00 38.23 2.66
7216 10205 5.901552 ACAGGTTTGTGGTCATTTAACTTG 58.098 37.500 0.00 0.00 35.83 3.16
7217 10206 5.654650 ACAGGTTTGTGGTCATTTAACTTGA 59.345 36.000 0.00 0.00 35.83 3.02
7218 10207 5.977129 CAGGTTTGTGGTCATTTAACTTGAC 59.023 40.000 8.57 8.57 42.20 3.18
7219 10208 5.891551 AGGTTTGTGGTCATTTAACTTGACT 59.108 36.000 14.30 0.00 42.48 3.41
7220 10209 6.379988 AGGTTTGTGGTCATTTAACTTGACTT 59.620 34.615 14.30 0.00 42.48 3.01
7221 10210 7.558444 AGGTTTGTGGTCATTTAACTTGACTTA 59.442 33.333 14.30 5.12 42.48 2.24
7222 10211 8.192110 GGTTTGTGGTCATTTAACTTGACTTAA 58.808 33.333 14.30 7.31 42.48 1.85
7223 10212 9.575783 GTTTGTGGTCATTTAACTTGACTTAAA 57.424 29.630 14.30 11.06 42.48 1.52
7224 10213 9.575783 TTTGTGGTCATTTAACTTGACTTAAAC 57.424 29.630 14.30 9.90 42.48 2.01
7225 10214 7.411274 TGTGGTCATTTAACTTGACTTAAACG 58.589 34.615 14.30 0.00 42.48 3.60
7226 10215 7.066043 TGTGGTCATTTAACTTGACTTAAACGT 59.934 33.333 14.30 0.00 42.48 3.99
7227 10216 7.375017 GTGGTCATTTAACTTGACTTAAACGTG 59.625 37.037 14.30 0.00 42.48 4.49
7228 10217 6.358822 GGTCATTTAACTTGACTTAAACGTGC 59.641 38.462 14.30 0.00 42.48 5.34
7229 10218 6.908284 GTCATTTAACTTGACTTAAACGTGCA 59.092 34.615 9.48 0.00 40.26 4.57
7230 10219 7.111593 GTCATTTAACTTGACTTAAACGTGCAG 59.888 37.037 9.48 0.00 40.26 4.41
7231 10220 6.665474 TTTAACTTGACTTAAACGTGCAGA 57.335 33.333 0.00 0.00 0.00 4.26
7232 10221 6.854496 TTAACTTGACTTAAACGTGCAGAT 57.146 33.333 0.00 0.00 0.00 2.90
7233 10222 7.949903 TTAACTTGACTTAAACGTGCAGATA 57.050 32.000 0.00 0.00 0.00 1.98
7234 10223 5.840940 ACTTGACTTAAACGTGCAGATAC 57.159 39.130 0.00 0.00 0.00 2.24
7238 10227 3.248266 ACTTAAACGTGCAGATACGGTC 58.752 45.455 3.29 0.00 44.33 4.79
7239 10228 3.247442 CTTAAACGTGCAGATACGGTCA 58.753 45.455 3.29 0.00 44.33 4.02
7240 10229 1.425412 AAACGTGCAGATACGGTCAC 58.575 50.000 3.29 0.00 44.33 3.67
7241 10230 0.315886 AACGTGCAGATACGGTCACA 59.684 50.000 3.29 0.00 40.50 3.58
7242 10231 1.067142 AACGTGCAGATACGGTCACAT 60.067 47.619 3.29 0.00 40.50 3.21
7243 10232 1.640428 CGTGCAGATACGGTCACATT 58.360 50.000 0.00 0.00 40.22 2.71
7244 10233 2.804647 CGTGCAGATACGGTCACATTA 58.195 47.619 0.00 0.00 40.22 1.90
7245 10234 2.534349 CGTGCAGATACGGTCACATTAC 59.466 50.000 0.00 0.00 40.22 1.89
7246 10235 2.534349 GTGCAGATACGGTCACATTACG 59.466 50.000 0.00 0.00 0.00 3.18
7247 10236 1.521423 GCAGATACGGTCACATTACGC 59.479 52.381 0.00 0.00 0.00 4.42
7248 10237 1.779157 CAGATACGGTCACATTACGCG 59.221 52.381 3.53 3.53 0.00 6.01
7249 10238 1.402968 AGATACGGTCACATTACGCGT 59.597 47.619 19.17 19.17 33.16 6.01
7250 10239 2.613595 AGATACGGTCACATTACGCGTA 59.386 45.455 16.41 16.41 34.97 4.42
7251 10240 3.251729 AGATACGGTCACATTACGCGTAT 59.748 43.478 21.30 7.58 39.60 3.06
7252 10241 1.552226 ACGGTCACATTACGCGTATG 58.448 50.000 21.30 20.49 0.00 2.39
7253 10242 1.135315 ACGGTCACATTACGCGTATGT 60.135 47.619 21.30 21.10 0.00 2.29
7254 10243 1.254313 CGGTCACATTACGCGTATGTG 59.746 52.381 32.71 32.71 44.98 3.21
7255 10244 1.591158 GGTCACATTACGCGTATGTGG 59.409 52.381 34.76 25.27 44.08 4.17
7256 10245 1.591158 GTCACATTACGCGTATGTGGG 59.409 52.381 34.76 29.26 44.08 4.61
7257 10246 0.303493 CACATTACGCGTATGTGGGC 59.697 55.000 31.85 0.00 41.25 5.36
7263 10252 3.199891 GCGTATGTGGGCGGTTCC 61.200 66.667 0.00 0.00 0.00 3.62
7264 10253 2.266372 CGTATGTGGGCGGTTCCA 59.734 61.111 0.00 0.00 36.21 3.53
7265 10254 1.153249 CGTATGTGGGCGGTTCCAT 60.153 57.895 0.00 0.00 39.26 3.41
7266 10255 1.436195 CGTATGTGGGCGGTTCCATG 61.436 60.000 0.00 0.00 39.26 3.66
7267 10256 0.393808 GTATGTGGGCGGTTCCATGT 60.394 55.000 0.00 0.00 39.26 3.21
7268 10257 0.393673 TATGTGGGCGGTTCCATGTG 60.394 55.000 0.00 0.00 39.26 3.21
7269 10258 3.747976 GTGGGCGGTTCCATGTGC 61.748 66.667 0.00 0.00 39.26 4.57
7270 10259 4.277009 TGGGCGGTTCCATGTGCA 62.277 61.111 0.00 0.00 36.21 4.57
7271 10260 2.755469 GGGCGGTTCCATGTGCAT 60.755 61.111 0.00 0.00 36.21 3.96
7272 10261 2.491152 GGCGGTTCCATGTGCATG 59.509 61.111 5.26 5.26 38.51 4.06
7280 10269 3.134879 CATGTGCATGGCCCCATC 58.865 61.111 0.00 0.00 33.90 3.51
7281 10270 1.456892 CATGTGCATGGCCCCATCT 60.457 57.895 0.00 0.00 33.90 2.90
7282 10271 1.456892 ATGTGCATGGCCCCATCTG 60.457 57.895 0.00 0.00 33.90 2.90
7283 10272 2.043652 GTGCATGGCCCCATCTGT 60.044 61.111 0.00 0.00 33.90 3.41
7284 10273 2.123428 GTGCATGGCCCCATCTGTC 61.123 63.158 0.00 0.00 33.90 3.51
7285 10274 2.276409 GCATGGCCCCATCTGTCA 59.724 61.111 0.00 0.00 33.90 3.58
7286 10275 1.826921 GCATGGCCCCATCTGTCAG 60.827 63.158 0.00 0.00 33.90 3.51
7287 10276 1.611419 CATGGCCCCATCTGTCAGT 59.389 57.895 0.00 0.00 33.90 3.41
7288 10277 0.750546 CATGGCCCCATCTGTCAGTG 60.751 60.000 0.00 0.00 33.90 3.66
7289 10278 0.915872 ATGGCCCCATCTGTCAGTGA 60.916 55.000 0.00 0.00 29.42 3.41
7290 10279 1.222936 GGCCCCATCTGTCAGTGAG 59.777 63.158 0.00 0.00 0.00 3.51
7291 10280 1.267574 GGCCCCATCTGTCAGTGAGA 61.268 60.000 0.00 0.00 0.00 3.27
7305 10294 5.491982 GTCAGTGAGACCCTCATAAATTGT 58.508 41.667 0.00 0.00 42.73 2.71
7306 10295 5.940470 GTCAGTGAGACCCTCATAAATTGTT 59.060 40.000 0.00 0.00 42.73 2.83
7307 10296 6.431234 GTCAGTGAGACCCTCATAAATTGTTT 59.569 38.462 0.00 0.00 42.73 2.83
7312 10301 8.122952 GTGAGACCCTCATAAATTGTTTATTCG 58.877 37.037 0.00 0.00 42.73 3.34
7313 10302 7.027778 AGACCCTCATAAATTGTTTATTCGC 57.972 36.000 0.00 0.00 33.73 4.70
7322 10311 8.855279 CATAAATTGTTTATTCGCGGAAAAAGA 58.145 29.630 6.13 0.00 33.73 2.52
7324 10313 4.149910 TGTTTATTCGCGGAAAAAGACC 57.850 40.909 6.13 0.00 0.00 3.85
7330 10319 4.058797 CGGAAAAAGACCGCCACT 57.941 55.556 0.00 0.00 43.74 4.00
7342 10331 4.606071 GCCACTGCGACTCAGAAT 57.394 55.556 0.00 0.00 45.72 2.40
7386 10376 4.726035 TTACATAAATCCCCGGCCATAA 57.274 40.909 2.24 0.00 0.00 1.90
7403 10393 5.390885 GGCCATAACACTGCACATATATTCG 60.391 44.000 0.00 0.00 0.00 3.34
7408 10398 9.158364 CATAACACTGCACATATATTCGAAAAC 57.842 33.333 0.00 0.00 0.00 2.43
7424 10414 7.862512 TTCGAAAACTAACACCTAAAAAGGA 57.137 32.000 0.00 0.00 0.00 3.36
7513 10522 7.320443 TGATGCCAGATAACAAACTTATGTC 57.680 36.000 0.00 0.00 31.81 3.06
7551 10560 2.747446 ACGTGTAGTTTGAATGGGATGC 59.253 45.455 0.00 0.00 0.00 3.91
7562 10571 2.291209 ATGGGATGCGGATATTGCAA 57.709 45.000 0.00 0.00 46.87 4.08
7591 10603 7.700322 TTTTGCACGCAATTTTGTAAGATAA 57.300 28.000 5.11 0.00 35.70 1.75
7943 10994 6.706055 ATACAAAACGATGAGTACACACAG 57.294 37.500 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.186826 GGCTTCCGCAAGTGTGTGT 61.187 57.895 0.00 0.00 38.10 3.72
5 6 1.893808 CAGGCTTCCGCAAGTGTGT 60.894 57.895 0.00 0.00 38.10 3.72
6 7 2.620112 CCAGGCTTCCGCAAGTGTG 61.620 63.158 0.00 0.00 38.10 3.82
7 8 2.281761 CCAGGCTTCCGCAAGTGT 60.282 61.111 0.00 0.00 38.10 3.55
8 9 2.463589 TACCCAGGCTTCCGCAAGTG 62.464 60.000 0.00 0.00 38.10 3.16
9 10 1.562672 ATACCCAGGCTTCCGCAAGT 61.563 55.000 0.00 0.00 38.10 3.16
10 11 1.097547 CATACCCAGGCTTCCGCAAG 61.098 60.000 0.00 0.00 38.10 4.01
11 12 1.077787 CATACCCAGGCTTCCGCAA 60.078 57.895 0.00 0.00 38.10 4.85
12 13 2.589540 CATACCCAGGCTTCCGCA 59.410 61.111 0.00 0.00 38.10 5.69
13 14 2.203209 CCATACCCAGGCTTCCGC 60.203 66.667 0.00 0.00 0.00 5.54
14 15 1.146263 GTCCATACCCAGGCTTCCG 59.854 63.158 0.00 0.00 0.00 4.30
15 16 0.919710 AAGTCCATACCCAGGCTTCC 59.080 55.000 0.00 0.00 0.00 3.46
16 17 3.039011 TCTAAGTCCATACCCAGGCTTC 58.961 50.000 0.00 0.00 0.00 3.86
17 18 3.130734 TCTAAGTCCATACCCAGGCTT 57.869 47.619 0.00 0.00 0.00 4.35
18 19 2.868964 TCTAAGTCCATACCCAGGCT 57.131 50.000 0.00 0.00 0.00 4.58
19 20 3.926058 TTTCTAAGTCCATACCCAGGC 57.074 47.619 0.00 0.00 0.00 4.85
20 21 5.174037 TGTTTTCTAAGTCCATACCCAGG 57.826 43.478 0.00 0.00 0.00 4.45
21 22 6.238648 AGTTGTTTTCTAAGTCCATACCCAG 58.761 40.000 0.00 0.00 0.00 4.45
22 23 6.195600 AGTTGTTTTCTAAGTCCATACCCA 57.804 37.500 0.00 0.00 0.00 4.51
23 24 7.881751 AGTTAGTTGTTTTCTAAGTCCATACCC 59.118 37.037 0.00 0.00 0.00 3.69
24 25 8.843885 AGTTAGTTGTTTTCTAAGTCCATACC 57.156 34.615 0.00 0.00 0.00 2.73
28 29 9.280174 CCATTAGTTAGTTGTTTTCTAAGTCCA 57.720 33.333 0.00 0.00 34.31 4.02
29 30 8.727910 CCCATTAGTTAGTTGTTTTCTAAGTCC 58.272 37.037 0.00 0.00 34.31 3.85
30 31 8.235226 GCCCATTAGTTAGTTGTTTTCTAAGTC 58.765 37.037 0.00 0.00 34.31 3.01
31 32 7.942894 AGCCCATTAGTTAGTTGTTTTCTAAGT 59.057 33.333 0.00 0.00 35.84 2.24
32 33 8.336801 AGCCCATTAGTTAGTTGTTTTCTAAG 57.663 34.615 0.00 0.00 0.00 2.18
33 34 8.573035 CAAGCCCATTAGTTAGTTGTTTTCTAA 58.427 33.333 0.00 0.00 0.00 2.10
34 35 7.722285 ACAAGCCCATTAGTTAGTTGTTTTCTA 59.278 33.333 0.00 0.00 0.00 2.10
35 36 6.549736 ACAAGCCCATTAGTTAGTTGTTTTCT 59.450 34.615 0.00 0.00 0.00 2.52
36 37 6.745116 ACAAGCCCATTAGTTAGTTGTTTTC 58.255 36.000 0.00 0.00 0.00 2.29
37 38 6.724893 ACAAGCCCATTAGTTAGTTGTTTT 57.275 33.333 0.00 0.00 0.00 2.43
38 39 6.072893 CGTACAAGCCCATTAGTTAGTTGTTT 60.073 38.462 0.00 0.00 0.00 2.83
39 40 5.410439 CGTACAAGCCCATTAGTTAGTTGTT 59.590 40.000 0.00 0.00 0.00 2.83
40 41 4.933400 CGTACAAGCCCATTAGTTAGTTGT 59.067 41.667 0.00 0.00 0.00 3.32
41 42 4.933400 ACGTACAAGCCCATTAGTTAGTTG 59.067 41.667 0.00 0.00 0.00 3.16
42 43 4.933400 CACGTACAAGCCCATTAGTTAGTT 59.067 41.667 0.00 0.00 0.00 2.24
43 44 4.501071 CACGTACAAGCCCATTAGTTAGT 58.499 43.478 0.00 0.00 0.00 2.24
44 45 3.869246 CCACGTACAAGCCCATTAGTTAG 59.131 47.826 0.00 0.00 0.00 2.34
45 46 3.369681 CCCACGTACAAGCCCATTAGTTA 60.370 47.826 0.00 0.00 0.00 2.24
46 47 2.617021 CCCACGTACAAGCCCATTAGTT 60.617 50.000 0.00 0.00 0.00 2.24
47 48 1.065709 CCCACGTACAAGCCCATTAGT 60.066 52.381 0.00 0.00 0.00 2.24
48 49 1.663695 CCCACGTACAAGCCCATTAG 58.336 55.000 0.00 0.00 0.00 1.73
49 50 0.393267 GCCCACGTACAAGCCCATTA 60.393 55.000 0.00 0.00 0.00 1.90
50 51 1.677633 GCCCACGTACAAGCCCATT 60.678 57.895 0.00 0.00 0.00 3.16
51 52 2.045340 GCCCACGTACAAGCCCAT 60.045 61.111 0.00 0.00 0.00 4.00
52 53 4.338710 GGCCCACGTACAAGCCCA 62.339 66.667 0.00 0.00 39.60 5.36
54 55 1.176619 AAAAGGCCCACGTACAAGCC 61.177 55.000 0.00 8.77 46.13 4.35
55 56 0.671796 AAAAAGGCCCACGTACAAGC 59.328 50.000 0.00 0.00 0.00 4.01
71 72 5.130350 ACGTGATTCTGGAGAAAGGAAAAA 58.870 37.500 0.00 0.00 37.61 1.94
72 73 4.714632 ACGTGATTCTGGAGAAAGGAAAA 58.285 39.130 0.00 0.00 37.61 2.29
73 74 4.351874 ACGTGATTCTGGAGAAAGGAAA 57.648 40.909 0.00 0.00 37.61 3.13
74 75 5.477607 TTACGTGATTCTGGAGAAAGGAA 57.522 39.130 0.00 0.00 37.61 3.36
75 76 5.245301 TCTTTACGTGATTCTGGAGAAAGGA 59.755 40.000 0.00 0.00 37.61 3.36
76 77 5.479306 TCTTTACGTGATTCTGGAGAAAGG 58.521 41.667 0.00 0.00 37.61 3.11
77 78 7.436673 CCTATCTTTACGTGATTCTGGAGAAAG 59.563 40.741 0.00 0.00 37.61 2.62
78 79 7.265673 CCTATCTTTACGTGATTCTGGAGAAA 58.734 38.462 0.00 0.00 37.61 2.52
79 80 6.183360 CCCTATCTTTACGTGATTCTGGAGAA 60.183 42.308 0.00 0.00 38.56 2.87
80 81 5.302059 CCCTATCTTTACGTGATTCTGGAGA 59.698 44.000 0.00 0.00 0.00 3.71
81 82 5.509840 CCCCTATCTTTACGTGATTCTGGAG 60.510 48.000 0.00 0.00 0.00 3.86
82 83 4.344102 CCCCTATCTTTACGTGATTCTGGA 59.656 45.833 0.00 0.00 0.00 3.86
83 84 4.503296 CCCCCTATCTTTACGTGATTCTGG 60.503 50.000 0.00 0.00 0.00 3.86
84 85 4.632153 CCCCCTATCTTTACGTGATTCTG 58.368 47.826 0.00 0.00 0.00 3.02
85 86 4.957684 CCCCCTATCTTTACGTGATTCT 57.042 45.455 0.00 0.00 0.00 2.40
103 104 3.853698 TACAACGTGCTTGGCCCCC 62.854 63.158 0.00 0.00 33.66 5.40
104 105 2.281900 TACAACGTGCTTGGCCCC 60.282 61.111 0.00 0.00 33.66 5.80
105 106 2.951458 GTACAACGTGCTTGGCCC 59.049 61.111 0.00 0.00 33.66 5.80
106 107 2.554272 CGTACAACGTGCTTGGCC 59.446 61.111 0.00 0.00 36.74 5.36
116 117 6.506464 AGCGATATGATTTACACGTACAAC 57.494 37.500 0.00 0.00 0.00 3.32
117 118 8.806177 ATTAGCGATATGATTTACACGTACAA 57.194 30.769 0.00 0.00 0.00 2.41
118 119 8.806177 AATTAGCGATATGATTTACACGTACA 57.194 30.769 0.00 0.00 0.00 2.90
121 122 8.706035 GGTTAATTAGCGATATGATTTACACGT 58.294 33.333 0.00 0.00 0.00 4.49
122 123 8.705134 TGGTTAATTAGCGATATGATTTACACG 58.295 33.333 0.00 0.00 0.00 4.49
123 124 9.807386 GTGGTTAATTAGCGATATGATTTACAC 57.193 33.333 0.00 0.00 0.00 2.90
124 125 9.772973 AGTGGTTAATTAGCGATATGATTTACA 57.227 29.630 0.00 0.00 0.00 2.41
127 128 9.998106 AGTAGTGGTTAATTAGCGATATGATTT 57.002 29.630 0.00 0.00 0.00 2.17
128 129 9.998106 AAGTAGTGGTTAATTAGCGATATGATT 57.002 29.630 0.00 0.00 0.00 2.57
130 131 9.903682 GTAAGTAGTGGTTAATTAGCGATATGA 57.096 33.333 0.00 0.00 0.00 2.15
131 132 9.687210 TGTAAGTAGTGGTTAATTAGCGATATG 57.313 33.333 0.00 0.00 0.00 1.78
134 135 9.609346 ATTTGTAAGTAGTGGTTAATTAGCGAT 57.391 29.630 0.00 0.00 0.00 4.58
156 157 6.427150 CCCCTAACGATCGAACAAATATTTG 58.573 40.000 24.34 23.60 43.62 2.32
157 158 5.529800 CCCCCTAACGATCGAACAAATATTT 59.470 40.000 24.34 4.52 0.00 1.40
158 159 5.061179 CCCCCTAACGATCGAACAAATATT 58.939 41.667 24.34 5.30 0.00 1.28
159 160 4.638304 CCCCCTAACGATCGAACAAATAT 58.362 43.478 24.34 0.00 0.00 1.28
160 161 4.062677 CCCCCTAACGATCGAACAAATA 57.937 45.455 24.34 4.03 0.00 1.40
161 162 2.914059 CCCCCTAACGATCGAACAAAT 58.086 47.619 24.34 0.00 0.00 2.32
162 163 2.389962 CCCCCTAACGATCGAACAAA 57.610 50.000 24.34 0.85 0.00 2.83
213 214 4.779475 AGTTTCACACTGGCGGAG 57.221 55.556 0.00 0.00 32.83 4.63
220 221 4.989279 AAAGCATTCACAGTTTCACACT 57.011 36.364 0.00 0.00 35.35 3.55
246 247 2.892373 AATGTCCGTGCATTGTAACG 57.108 45.000 0.00 6.95 37.65 3.18
250 251 2.134346 GCAAAAATGTCCGTGCATTGT 58.866 42.857 0.00 0.00 38.87 2.71
254 255 3.932545 ATTAGCAAAAATGTCCGTGCA 57.067 38.095 0.00 0.00 39.50 4.57
255 256 6.885735 ATAAATTAGCAAAAATGTCCGTGC 57.114 33.333 0.00 0.00 37.26 5.34
270 271 9.470399 ACCAAACAACCCCTTAGTATAAATTAG 57.530 33.333 0.00 0.00 0.00 1.73
273 274 8.174757 AGAACCAAACAACCCCTTAGTATAAAT 58.825 33.333 0.00 0.00 0.00 1.40
298 300 6.238484 GCAAAGTATGGCATTGTTAGGTCTAG 60.238 42.308 4.78 0.00 0.00 2.43
302 304 4.718940 GCAAAGTATGGCATTGTTAGGT 57.281 40.909 4.78 0.00 0.00 3.08
329 331 5.548406 TGAAGAACTAACCTTAGCCAAGTC 58.452 41.667 0.00 0.00 34.09 3.01
348 360 7.515059 CGTCAACTTGTGGCTTTTATTTTGAAG 60.515 37.037 0.00 0.00 0.00 3.02
351 363 5.051106 CCGTCAACTTGTGGCTTTTATTTTG 60.051 40.000 0.00 0.00 0.00 2.44
357 369 0.744281 CCCGTCAACTTGTGGCTTTT 59.256 50.000 0.00 0.00 0.00 2.27
358 370 0.395173 ACCCGTCAACTTGTGGCTTT 60.395 50.000 0.00 0.00 0.00 3.51
359 371 0.818040 GACCCGTCAACTTGTGGCTT 60.818 55.000 0.00 0.00 0.00 4.35
369 381 2.829023 AGATTCCCTTAGACCCGTCAA 58.171 47.619 0.00 0.00 0.00 3.18
374 386 3.263425 TGTGACAAGATTCCCTTAGACCC 59.737 47.826 0.00 0.00 32.86 4.46
375 387 4.553330 TGTGACAAGATTCCCTTAGACC 57.447 45.455 0.00 0.00 32.86 3.85
376 388 7.454260 AAAATGTGACAAGATTCCCTTAGAC 57.546 36.000 0.00 0.00 32.86 2.59
413 425 1.710809 GCCACCCTATGACCCCATATT 59.289 52.381 0.00 0.00 34.96 1.28
416 428 0.627469 AAGCCACCCTATGACCCCAT 60.627 55.000 0.00 0.00 36.81 4.00
421 433 3.432326 CCTTAGTCAAGCCACCCTATGAC 60.432 52.174 0.00 0.00 41.88 3.06
422 434 2.771943 CCTTAGTCAAGCCACCCTATGA 59.228 50.000 0.00 0.00 0.00 2.15
424 436 2.505819 CACCTTAGTCAAGCCACCCTAT 59.494 50.000 0.00 0.00 0.00 2.57
428 440 1.071699 TCACACCTTAGTCAAGCCACC 59.928 52.381 0.00 0.00 0.00 4.61
436 448 6.564125 CGTTTGATTCAAGTCACACCTTAGTC 60.564 42.308 0.00 0.00 0.00 2.59
442 454 2.604614 GGCGTTTGATTCAAGTCACACC 60.605 50.000 0.00 0.00 0.00 4.16
461 473 5.047377 TGAAGTTTGATCAATTTAGGTGGGC 60.047 40.000 9.40 0.00 0.00 5.36
462 474 6.588719 TGAAGTTTGATCAATTTAGGTGGG 57.411 37.500 9.40 0.00 0.00 4.61
492 504 3.153919 GCTGTTTGGATTGGGACTAACA 58.846 45.455 0.00 0.00 0.00 2.41
497 514 1.257750 GGGGCTGTTTGGATTGGGAC 61.258 60.000 0.00 0.00 0.00 4.46
500 517 0.334676 TAGGGGGCTGTTTGGATTGG 59.665 55.000 0.00 0.00 0.00 3.16
504 521 1.713647 TGATTTAGGGGGCTGTTTGGA 59.286 47.619 0.00 0.00 0.00 3.53
510 527 3.433740 GGACTAACTGATTTAGGGGGCTG 60.434 52.174 0.00 0.00 41.58 4.85
513 530 3.394645 AGGGACTAACTGATTTAGGGGG 58.605 50.000 0.00 0.00 41.58 5.40
535 552 5.182760 CCTCCGACTAACTTTACTGTGTAGT 59.817 44.000 0.00 0.00 40.99 2.73
536 553 5.392811 CCCTCCGACTAACTTTACTGTGTAG 60.393 48.000 0.00 0.00 0.00 2.74
537 554 4.460382 CCCTCCGACTAACTTTACTGTGTA 59.540 45.833 0.00 0.00 0.00 2.90
553 570 1.887797 ACACATAAATCCCCCTCCGA 58.112 50.000 0.00 0.00 0.00 4.55
555 572 3.382083 ACAACACATAAATCCCCCTCC 57.618 47.619 0.00 0.00 0.00 4.30
556 573 5.112129 ACTACAACACATAAATCCCCCTC 57.888 43.478 0.00 0.00 0.00 4.30
557 574 4.383770 CGACTACAACACATAAATCCCCCT 60.384 45.833 0.00 0.00 0.00 4.79
558 575 3.875134 CGACTACAACACATAAATCCCCC 59.125 47.826 0.00 0.00 0.00 5.40
559 576 4.761975 TCGACTACAACACATAAATCCCC 58.238 43.478 0.00 0.00 0.00 4.81
560 577 4.809426 CCTCGACTACAACACATAAATCCC 59.191 45.833 0.00 0.00 0.00 3.85
561 578 5.291128 CACCTCGACTACAACACATAAATCC 59.709 44.000 0.00 0.00 0.00 3.01
562 579 5.291128 CCACCTCGACTACAACACATAAATC 59.709 44.000 0.00 0.00 0.00 2.17
563 580 5.175859 CCACCTCGACTACAACACATAAAT 58.824 41.667 0.00 0.00 0.00 1.40
565 582 3.615592 GCCACCTCGACTACAACACATAA 60.616 47.826 0.00 0.00 0.00 1.90
566 583 2.094390 GCCACCTCGACTACAACACATA 60.094 50.000 0.00 0.00 0.00 2.29
568 585 0.032952 GCCACCTCGACTACAACACA 59.967 55.000 0.00 0.00 0.00 3.72
571 588 1.270147 ACTTGCCACCTCGACTACAAC 60.270 52.381 0.00 0.00 0.00 3.32
572 589 1.000506 GACTTGCCACCTCGACTACAA 59.999 52.381 0.00 0.00 0.00 2.41
573 590 0.601558 GACTTGCCACCTCGACTACA 59.398 55.000 0.00 0.00 0.00 2.74
586 3186 0.240945 CCAATTCACCCGTGACTTGC 59.759 55.000 17.77 0.00 44.12 4.01
587 3187 0.881118 CCCAATTCACCCGTGACTTG 59.119 55.000 16.74 16.74 44.67 3.16
705 3313 2.874447 AGGGAGGTAGGAGAGAGGTAA 58.126 52.381 0.00 0.00 0.00 2.85
706 3314 2.609609 AGGGAGGTAGGAGAGAGGTA 57.390 55.000 0.00 0.00 0.00 3.08
707 3315 2.137702 GTAGGGAGGTAGGAGAGAGGT 58.862 57.143 0.00 0.00 0.00 3.85
708 3316 1.072648 CGTAGGGAGGTAGGAGAGAGG 59.927 61.905 0.00 0.00 0.00 3.69
709 3317 2.048601 TCGTAGGGAGGTAGGAGAGAG 58.951 57.143 0.00 0.00 0.00 3.20
710 3318 2.187239 TCGTAGGGAGGTAGGAGAGA 57.813 55.000 0.00 0.00 0.00 3.10
711 3319 2.950975 GTTTCGTAGGGAGGTAGGAGAG 59.049 54.545 0.00 0.00 0.00 3.20
712 3320 2.681976 CGTTTCGTAGGGAGGTAGGAGA 60.682 54.545 0.00 0.00 0.00 3.71
713 3321 1.674962 CGTTTCGTAGGGAGGTAGGAG 59.325 57.143 0.00 0.00 0.00 3.69
714 3322 1.683011 CCGTTTCGTAGGGAGGTAGGA 60.683 57.143 0.00 0.00 33.45 2.94
715 3323 0.743097 CCGTTTCGTAGGGAGGTAGG 59.257 60.000 0.00 0.00 33.45 3.18
875 3483 8.934507 TGAATTAGGAACGAAACAAAACAATT 57.065 26.923 0.00 0.00 0.00 2.32
926 3534 2.225382 TACGGATTGAGAGGACCACA 57.775 50.000 0.00 0.00 0.00 4.17
952 3560 3.729716 CAGTTATTAGTCCTAACGCGCTC 59.270 47.826 5.73 0.00 34.88 5.03
1126 3753 8.075761 ACTGTACCAGTACTAAATTCCTAAGG 57.924 38.462 9.24 0.00 43.46 2.69
1169 3806 2.488355 CGGCTGCCTGCTTCATTG 59.512 61.111 17.92 0.00 42.39 2.82
1240 3877 4.202577 GGAAGGATAAGGATAAGGGGTTGG 60.203 50.000 0.00 0.00 0.00 3.77
1264 3904 5.821516 ATGAAGAAGACCAGTAGTACGAG 57.178 43.478 0.00 0.00 0.00 4.18
1383 4023 7.143340 GCATGCTTATATTTCTGCAGATTGAA 58.857 34.615 19.04 9.69 38.87 2.69
1629 4273 2.735772 GGAGAGGAAGATGGCGGCA 61.736 63.158 16.34 16.34 0.00 5.69
1720 4364 2.430367 GTTCTGCCCGGTCTTGGT 59.570 61.111 0.00 0.00 0.00 3.67
1971 4616 2.652095 TAGGACCCGGCCAAGAACG 61.652 63.158 2.24 0.00 0.00 3.95
2111 4756 3.211963 GGTGGTGGCGATGGATGC 61.212 66.667 0.00 0.00 0.00 3.91
2251 4908 3.063084 GAGGTCGTCGCACTCCCT 61.063 66.667 5.11 0.00 0.00 4.20
2349 5006 0.035820 GTGGTGGGTAGCGATCCAAA 60.036 55.000 0.00 0.00 37.69 3.28
2548 5205 0.893270 CCGTGGGGAAAACAGCATGA 60.893 55.000 0.00 0.00 35.37 3.07
2698 5358 2.034221 GTGGAGGAGTTGGTGGCC 59.966 66.667 0.00 0.00 0.00 5.36
2879 5548 1.202639 ACGACCAAGTCATTGAGCACA 60.203 47.619 0.00 0.00 38.83 4.57
3026 5721 2.061578 TGAGGGAAGCGCCGGATAA 61.062 57.895 5.05 0.00 37.63 1.75
3200 6070 4.947147 GGCGGTGGTGGCAACTGA 62.947 66.667 3.27 0.00 37.61 3.41
3394 6270 2.577593 GAAGGCCGGCGTAGTTCT 59.422 61.111 23.92 8.64 0.00 3.01
3740 6649 2.669240 GTGAAAGGTAGGCGGCCT 59.331 61.111 26.95 26.95 38.11 5.19
3816 6725 4.641645 CCACTGCAGGGCCGTCAA 62.642 66.667 19.93 0.00 0.00 3.18
3891 6800 0.031616 GACTGGAGATCCTGGGGTCT 60.032 60.000 1.52 1.52 39.04 3.85
4114 7041 1.529152 TAGGGCTCGTCGCAGTTGAA 61.529 55.000 2.27 0.00 41.67 2.69
4115 7042 1.974875 TAGGGCTCGTCGCAGTTGA 60.975 57.895 2.27 0.00 41.67 3.18
4116 7043 1.805945 GTAGGGCTCGTCGCAGTTG 60.806 63.158 2.27 0.00 41.67 3.16
4117 7044 2.273179 TGTAGGGCTCGTCGCAGTT 61.273 57.895 2.27 0.00 41.67 3.16
4118 7045 2.675423 TGTAGGGCTCGTCGCAGT 60.675 61.111 2.27 0.00 41.67 4.40
4119 7046 2.202623 GTGTAGGGCTCGTCGCAG 60.203 66.667 2.27 0.00 41.67 5.18
4120 7047 4.111016 CGTGTAGGGCTCGTCGCA 62.111 66.667 2.27 0.00 41.67 5.10
4122 7049 3.736482 GAGCGTGTAGGGCTCGTCG 62.736 68.421 0.00 0.00 46.38 5.12
4154 7081 1.683629 CCTCCAGGTAGAAGAGTCGCT 60.684 57.143 0.00 0.00 0.00 4.93
4673 7640 4.566004 TCAATTCCTTTCACCTAGTGACG 58.434 43.478 0.00 0.00 42.60 4.35
4674 7641 7.308435 CAATTCAATTCCTTTCACCTAGTGAC 58.692 38.462 0.00 0.00 42.60 3.67
4675 7642 6.434028 CCAATTCAATTCCTTTCACCTAGTGA 59.566 38.462 0.00 0.00 41.09 3.41
4700 7667 4.388499 TCCGGACTTGAAGCGGCC 62.388 66.667 0.00 0.00 0.00 6.13
4705 7672 2.526304 TGTCAACTCCGGACTTGAAG 57.474 50.000 23.04 6.36 36.26 3.02
4714 7681 2.542178 TGTGAAACGAATGTCAACTCCG 59.458 45.455 0.00 0.00 42.39 4.63
4715 7682 4.527564 CTTGTGAAACGAATGTCAACTCC 58.472 43.478 0.00 0.00 42.39 3.85
4728 7695 3.392882 CAGGCCAATTTCCTTGTGAAAC 58.607 45.455 5.01 0.00 45.38 2.78
4756 7723 3.506810 GCGTTGCATAAAATGGCTACAA 58.493 40.909 0.00 0.00 35.89 2.41
4786 7754 8.290959 TCAGTATGTTGCAGGAATTGCCATTC 62.291 42.308 1.87 1.87 45.08 2.67
4804 7772 3.820467 TCAAGCAAGTTGGGTTCAGTATG 59.180 43.478 4.75 0.00 36.71 2.39
4807 7775 2.435372 TCAAGCAAGTTGGGTTCAGT 57.565 45.000 4.75 0.00 36.71 3.41
4836 7804 7.445121 TGGTGCATTTTTGTGGATGTTAATAA 58.555 30.769 0.00 0.00 0.00 1.40
4883 7851 3.592059 TGGCACTAAGGTTAAGTAAGCG 58.408 45.455 0.00 0.00 38.61 4.68
4948 7916 1.303282 GACCACAGGGGCCTTTAGG 59.697 63.158 0.84 2.05 42.05 2.69
5281 8252 1.557371 GCTAGTTCTTGGCCTTCCTCT 59.443 52.381 3.32 0.00 0.00 3.69
5370 8341 4.744795 ATTACACTGGGAGACAAGCTAG 57.255 45.455 0.00 0.00 0.00 3.42
5527 8498 6.273071 AGAAAACACTGCTGGTTTAAATGAC 58.727 36.000 9.44 0.00 37.43 3.06
5896 8871 6.856938 CCATAAATTGTTTTCAACCGACGTAA 59.143 34.615 0.00 0.00 42.94 3.18
6104 9081 6.681729 AGGACACCTTTAGTATCACTTGAA 57.318 37.500 0.00 0.00 0.00 2.69
6300 9277 3.181440 CCTCCATATGGGCTTTGAGCTAA 60.181 47.826 21.78 0.00 41.99 3.09
6314 9291 1.133668 GCAACTGGGCTTCCTCCATAT 60.134 52.381 0.00 0.00 33.29 1.78
6492 9480 0.107654 GATCACCCTGGAGAAACCCG 60.108 60.000 0.00 0.00 38.00 5.28
6556 9544 4.424566 CAATGGGTGCTGCGCCAC 62.425 66.667 31.09 20.93 35.42 5.01
6936 9924 1.827315 TTTTCTGCGCAACCTCGACG 61.827 55.000 13.05 0.00 0.00 5.12
7041 10029 1.723220 TTCAACGTCGACCAACAACA 58.277 45.000 10.58 0.00 0.00 3.33
7130 10119 9.228949 GCAAGTTCTATGATTCCTGATGATATT 57.771 33.333 0.00 0.00 0.00 1.28
7131 10120 7.548427 CGCAAGTTCTATGATTCCTGATGATAT 59.452 37.037 0.00 0.00 0.00 1.63
7132 10121 6.870439 CGCAAGTTCTATGATTCCTGATGATA 59.130 38.462 0.00 0.00 0.00 2.15
7133 10122 5.699915 CGCAAGTTCTATGATTCCTGATGAT 59.300 40.000 0.00 0.00 0.00 2.45
7134 10123 5.052481 CGCAAGTTCTATGATTCCTGATGA 58.948 41.667 0.00 0.00 0.00 2.92
7135 10124 5.340010 CGCAAGTTCTATGATTCCTGATG 57.660 43.478 0.00 0.00 0.00 3.07
7153 10142 3.808726 ACCAAACTAAACATACGACGCAA 59.191 39.130 0.00 0.00 0.00 4.85
7154 10143 3.184783 CACCAAACTAAACATACGACGCA 59.815 43.478 0.00 0.00 0.00 5.24
7155 10144 3.728600 CACCAAACTAAACATACGACGC 58.271 45.455 0.00 0.00 0.00 5.19
7156 10145 3.430895 AGCACCAAACTAAACATACGACG 59.569 43.478 0.00 0.00 0.00 5.12
7157 10146 5.406175 TGTAGCACCAAACTAAACATACGAC 59.594 40.000 0.00 0.00 0.00 4.34
7158 10147 5.539979 TGTAGCACCAAACTAAACATACGA 58.460 37.500 0.00 0.00 0.00 3.43
7159 10148 5.849357 TGTAGCACCAAACTAAACATACG 57.151 39.130 0.00 0.00 0.00 3.06
7160 10149 7.198306 AGTTGTAGCACCAAACTAAACATAC 57.802 36.000 0.00 0.00 0.00 2.39
7161 10150 7.811117 AAGTTGTAGCACCAAACTAAACATA 57.189 32.000 0.00 0.00 0.00 2.29
7162 10151 6.709018 AAGTTGTAGCACCAAACTAAACAT 57.291 33.333 0.00 0.00 0.00 2.71
7163 10152 6.518208 AAAGTTGTAGCACCAAACTAAACA 57.482 33.333 0.00 0.00 0.00 2.83
7164 10153 8.914328 TTTAAAGTTGTAGCACCAAACTAAAC 57.086 30.769 0.00 0.00 0.00 2.01
7165 10154 9.924650 TTTTTAAAGTTGTAGCACCAAACTAAA 57.075 25.926 0.00 0.00 0.00 1.85
7168 10157 9.524106 GTATTTTTAAAGTTGTAGCACCAAACT 57.476 29.630 0.00 0.00 0.00 2.66
7169 10158 9.303537 TGTATTTTTAAAGTTGTAGCACCAAAC 57.696 29.630 0.00 0.00 0.00 2.93
7170 10159 9.522804 CTGTATTTTTAAAGTTGTAGCACCAAA 57.477 29.630 0.00 0.00 0.00 3.28
7171 10160 8.138712 CCTGTATTTTTAAAGTTGTAGCACCAA 58.861 33.333 0.00 0.00 0.00 3.67
7172 10161 7.285858 ACCTGTATTTTTAAAGTTGTAGCACCA 59.714 33.333 0.00 0.00 0.00 4.17
7173 10162 7.654568 ACCTGTATTTTTAAAGTTGTAGCACC 58.345 34.615 0.00 0.00 0.00 5.01
7174 10163 9.524106 AAACCTGTATTTTTAAAGTTGTAGCAC 57.476 29.630 0.00 0.00 0.00 4.40
7175 10164 9.522804 CAAACCTGTATTTTTAAAGTTGTAGCA 57.477 29.630 0.00 0.00 0.00 3.49
7176 10165 9.524106 ACAAACCTGTATTTTTAAAGTTGTAGC 57.476 29.630 0.00 0.00 32.54 3.58
7178 10167 9.804758 CCACAAACCTGTATTTTTAAAGTTGTA 57.195 29.630 0.00 0.00 33.22 2.41
7179 10168 8.315482 ACCACAAACCTGTATTTTTAAAGTTGT 58.685 29.630 0.00 0.00 33.22 3.32
7180 10169 8.710835 ACCACAAACCTGTATTTTTAAAGTTG 57.289 30.769 0.00 0.00 33.22 3.16
7181 10170 8.532819 TGACCACAAACCTGTATTTTTAAAGTT 58.467 29.630 0.00 0.00 33.22 2.66
7182 10171 8.068892 TGACCACAAACCTGTATTTTTAAAGT 57.931 30.769 0.00 0.00 33.22 2.66
7183 10172 9.541143 AATGACCACAAACCTGTATTTTTAAAG 57.459 29.630 0.00 0.00 33.22 1.85
7184 10173 9.892130 AAATGACCACAAACCTGTATTTTTAAA 57.108 25.926 0.00 0.00 33.22 1.52
7187 10176 9.320352 GTTAAATGACCACAAACCTGTATTTTT 57.680 29.630 0.00 0.00 33.22 1.94
7188 10177 8.700973 AGTTAAATGACCACAAACCTGTATTTT 58.299 29.630 0.00 0.00 33.22 1.82
7189 10178 8.245195 AGTTAAATGACCACAAACCTGTATTT 57.755 30.769 0.00 0.00 33.22 1.40
7190 10179 7.833285 AGTTAAATGACCACAAACCTGTATT 57.167 32.000 0.00 0.00 33.22 1.89
7191 10180 7.504238 TCAAGTTAAATGACCACAAACCTGTAT 59.496 33.333 0.00 0.00 33.22 2.29
7192 10181 6.829298 TCAAGTTAAATGACCACAAACCTGTA 59.171 34.615 0.00 0.00 33.22 2.74
7193 10182 5.654650 TCAAGTTAAATGACCACAAACCTGT 59.345 36.000 0.00 0.00 35.63 4.00
7194 10183 5.977129 GTCAAGTTAAATGACCACAAACCTG 59.023 40.000 10.23 0.00 41.02 4.00
7195 10184 5.891551 AGTCAAGTTAAATGACCACAAACCT 59.108 36.000 15.46 0.00 46.60 3.50
7196 10185 6.144078 AGTCAAGTTAAATGACCACAAACC 57.856 37.500 15.46 0.00 46.60 3.27
7197 10186 9.575783 TTTAAGTCAAGTTAAATGACCACAAAC 57.424 29.630 15.46 0.00 46.60 2.93
7198 10187 9.575783 GTTTAAGTCAAGTTAAATGACCACAAA 57.424 29.630 15.46 11.48 46.60 2.83
7199 10188 7.911205 CGTTTAAGTCAAGTTAAATGACCACAA 59.089 33.333 15.46 7.57 46.60 3.33
7200 10189 7.066043 ACGTTTAAGTCAAGTTAAATGACCACA 59.934 33.333 21.00 3.13 46.60 4.17
7201 10190 7.375017 CACGTTTAAGTCAAGTTAAATGACCAC 59.625 37.037 21.00 9.03 46.60 4.16
7202 10191 7.411274 CACGTTTAAGTCAAGTTAAATGACCA 58.589 34.615 21.00 5.28 46.60 4.02
7203 10192 6.358822 GCACGTTTAAGTCAAGTTAAATGACC 59.641 38.462 21.00 11.75 46.60 4.02
7204 10193 6.908284 TGCACGTTTAAGTCAAGTTAAATGAC 59.092 34.615 21.00 12.53 45.94 3.06
7205 10194 7.011576 TCTGCACGTTTAAGTCAAGTTAAATGA 59.988 33.333 21.00 5.97 39.64 2.57
7206 10195 7.129622 TCTGCACGTTTAAGTCAAGTTAAATG 58.870 34.615 15.77 15.77 41.60 2.32
7207 10196 7.254227 TCTGCACGTTTAAGTCAAGTTAAAT 57.746 32.000 6.16 0.00 35.03 1.40
7208 10197 6.665474 TCTGCACGTTTAAGTCAAGTTAAA 57.335 33.333 0.00 0.00 30.97 1.52
7209 10198 6.854496 ATCTGCACGTTTAAGTCAAGTTAA 57.146 33.333 0.00 0.00 0.00 2.01
7210 10199 6.088483 CGTATCTGCACGTTTAAGTCAAGTTA 59.912 38.462 0.00 0.00 37.16 2.24
7211 10200 5.107607 CGTATCTGCACGTTTAAGTCAAGTT 60.108 40.000 0.00 0.00 37.16 2.66
7212 10201 4.384846 CGTATCTGCACGTTTAAGTCAAGT 59.615 41.667 0.00 0.00 37.16 3.16
7213 10202 4.201589 CCGTATCTGCACGTTTAAGTCAAG 60.202 45.833 0.00 0.00 40.31 3.02
7214 10203 3.676172 CCGTATCTGCACGTTTAAGTCAA 59.324 43.478 0.00 0.00 40.31 3.18
7215 10204 3.247442 CCGTATCTGCACGTTTAAGTCA 58.753 45.455 0.00 0.00 40.31 3.41
7216 10205 3.248266 ACCGTATCTGCACGTTTAAGTC 58.752 45.455 0.00 0.00 40.31 3.01
7217 10206 3.248266 GACCGTATCTGCACGTTTAAGT 58.752 45.455 0.00 0.00 40.31 2.24
7218 10207 3.060363 GTGACCGTATCTGCACGTTTAAG 59.940 47.826 0.00 0.00 40.31 1.85
7219 10208 2.988493 GTGACCGTATCTGCACGTTTAA 59.012 45.455 0.00 0.00 40.31 1.52
7220 10209 2.030096 TGTGACCGTATCTGCACGTTTA 60.030 45.455 0.00 0.00 40.31 2.01
7221 10210 1.269883 TGTGACCGTATCTGCACGTTT 60.270 47.619 0.00 0.00 40.31 3.60
7222 10211 0.315886 TGTGACCGTATCTGCACGTT 59.684 50.000 0.00 0.00 40.31 3.99
7223 10212 0.530744 ATGTGACCGTATCTGCACGT 59.469 50.000 0.00 0.00 40.31 4.49
7224 10213 1.640428 AATGTGACCGTATCTGCACG 58.360 50.000 0.00 0.00 41.59 5.34
7225 10214 2.534349 CGTAATGTGACCGTATCTGCAC 59.466 50.000 0.00 0.00 0.00 4.57
7226 10215 2.804647 CGTAATGTGACCGTATCTGCA 58.195 47.619 0.00 0.00 0.00 4.41
7227 10216 1.521423 GCGTAATGTGACCGTATCTGC 59.479 52.381 0.00 0.00 0.00 4.26
7228 10217 1.779157 CGCGTAATGTGACCGTATCTG 59.221 52.381 0.00 0.00 0.00 2.90
7229 10218 1.402968 ACGCGTAATGTGACCGTATCT 59.597 47.619 11.67 0.00 0.00 1.98
7230 10219 1.831343 ACGCGTAATGTGACCGTATC 58.169 50.000 11.67 0.00 0.00 2.24
7231 10220 3.243168 ACATACGCGTAATGTGACCGTAT 60.243 43.478 24.55 0.00 43.40 3.06
7232 10221 2.097304 ACATACGCGTAATGTGACCGTA 59.903 45.455 24.55 0.00 38.52 4.02
7233 10222 1.135315 ACATACGCGTAATGTGACCGT 60.135 47.619 24.55 7.48 36.07 4.83
7234 10223 1.254313 CACATACGCGTAATGTGACCG 59.746 52.381 33.84 19.81 46.11 4.79
7235 10224 1.591158 CCACATACGCGTAATGTGACC 59.409 52.381 36.19 0.00 46.11 4.02
7236 10225 1.591158 CCCACATACGCGTAATGTGAC 59.409 52.381 36.19 0.00 46.11 3.67
7237 10226 1.929230 CCCACATACGCGTAATGTGA 58.071 50.000 36.19 17.95 46.11 3.58
7238 10227 0.303493 GCCCACATACGCGTAATGTG 59.697 55.000 32.17 32.17 43.70 3.21
7239 10228 1.149361 CGCCCACATACGCGTAATGT 61.149 55.000 24.55 22.33 43.35 2.71
7240 10229 1.562691 CGCCCACATACGCGTAATG 59.437 57.895 24.55 22.44 43.35 1.90
7241 10230 1.593209 CCGCCCACATACGCGTAAT 60.593 57.895 24.55 11.93 46.83 1.89
7242 10231 2.202770 CCGCCCACATACGCGTAA 60.203 61.111 24.55 6.98 46.83 3.18
7243 10232 2.887463 GAACCGCCCACATACGCGTA 62.887 60.000 22.94 22.94 46.83 4.42
7244 10233 4.382320 AACCGCCCACATACGCGT 62.382 61.111 19.17 19.17 46.83 6.01
7246 10235 3.199891 GGAACCGCCCACATACGC 61.200 66.667 0.00 0.00 0.00 4.42
7247 10236 1.153249 ATGGAACCGCCCACATACG 60.153 57.895 0.00 0.00 39.34 3.06
7248 10237 0.393808 ACATGGAACCGCCCACATAC 60.394 55.000 0.00 0.00 39.34 2.39
7249 10238 0.393673 CACATGGAACCGCCCACATA 60.394 55.000 0.00 0.00 39.34 2.29
7250 10239 1.678635 CACATGGAACCGCCCACAT 60.679 57.895 0.00 0.00 39.34 3.21
7251 10240 2.282110 CACATGGAACCGCCCACA 60.282 61.111 0.00 0.00 39.34 4.17
7252 10241 3.747976 GCACATGGAACCGCCCAC 61.748 66.667 0.00 0.00 39.34 4.61
7253 10242 3.582242 ATGCACATGGAACCGCCCA 62.582 57.895 0.00 0.00 41.05 5.36
7254 10243 2.755469 ATGCACATGGAACCGCCC 60.755 61.111 0.00 0.00 34.97 6.13
7255 10244 2.491152 CATGCACATGGAACCGCC 59.509 61.111 2.56 0.00 35.24 6.13
7263 10252 1.456892 AGATGGGGCCATGCACATG 60.457 57.895 4.39 3.56 36.70 3.21
7264 10253 1.456892 CAGATGGGGCCATGCACAT 60.457 57.895 4.39 0.00 36.70 3.21
7265 10254 2.043752 CAGATGGGGCCATGCACA 60.044 61.111 4.39 0.00 36.70 4.57
7266 10255 2.043652 ACAGATGGGGCCATGCAC 60.044 61.111 4.39 0.00 36.70 4.57
7267 10256 2.276409 GACAGATGGGGCCATGCA 59.724 61.111 4.39 0.00 36.70 3.96
7268 10257 1.826921 CTGACAGATGGGGCCATGC 60.827 63.158 4.39 0.00 36.70 4.06
7269 10258 0.750546 CACTGACAGATGGGGCCATG 60.751 60.000 10.08 0.23 36.70 3.66
7270 10259 0.915872 TCACTGACAGATGGGGCCAT 60.916 55.000 10.08 0.00 39.69 4.40
7271 10260 1.538629 TCACTGACAGATGGGGCCA 60.539 57.895 10.08 0.00 0.00 5.36
7272 10261 1.222936 CTCACTGACAGATGGGGCC 59.777 63.158 10.08 0.00 0.00 5.80
7273 10262 0.107945 GTCTCACTGACAGATGGGGC 60.108 60.000 10.08 1.55 44.73 5.80
7282 10271 5.491982 ACAATTTATGAGGGTCTCACTGAC 58.508 41.667 0.00 0.00 43.63 3.51
7283 10272 5.762179 ACAATTTATGAGGGTCTCACTGA 57.238 39.130 0.00 0.00 43.63 3.41
7284 10273 6.824305 AAACAATTTATGAGGGTCTCACTG 57.176 37.500 0.00 0.00 43.63 3.66
7285 10274 9.178758 GAATAAACAATTTATGAGGGTCTCACT 57.821 33.333 0.00 0.00 43.63 3.41
7286 10275 8.122952 CGAATAAACAATTTATGAGGGTCTCAC 58.877 37.037 0.00 0.00 43.63 3.51
7287 10276 7.201696 GCGAATAAACAATTTATGAGGGTCTCA 60.202 37.037 0.00 0.00 44.99 3.27
7288 10277 7.132863 GCGAATAAACAATTTATGAGGGTCTC 58.867 38.462 0.00 0.00 36.06 3.36
7289 10278 6.238374 CGCGAATAAACAATTTATGAGGGTCT 60.238 38.462 0.00 0.00 36.06 3.85
7290 10279 5.907391 CGCGAATAAACAATTTATGAGGGTC 59.093 40.000 0.00 0.00 36.06 4.46
7291 10280 5.220970 CCGCGAATAAACAATTTATGAGGGT 60.221 40.000 8.23 0.00 36.06 4.34
7292 10281 5.008217 TCCGCGAATAAACAATTTATGAGGG 59.992 40.000 8.23 2.06 36.06 4.30
7293 10282 6.055231 TCCGCGAATAAACAATTTATGAGG 57.945 37.500 8.23 0.00 36.06 3.86
7294 10283 7.962934 TTTCCGCGAATAAACAATTTATGAG 57.037 32.000 8.23 0.00 36.06 2.90
7295 10284 8.744008 TTTTTCCGCGAATAAACAATTTATGA 57.256 26.923 8.23 0.00 36.06 2.15
7296 10285 8.855279 TCTTTTTCCGCGAATAAACAATTTATG 58.145 29.630 8.23 0.00 36.06 1.90
7297 10286 8.856247 GTCTTTTTCCGCGAATAAACAATTTAT 58.144 29.630 8.23 0.00 37.43 1.40
7298 10287 7.326547 GGTCTTTTTCCGCGAATAAACAATTTA 59.673 33.333 8.23 0.00 0.00 1.40
7299 10288 6.144886 GGTCTTTTTCCGCGAATAAACAATTT 59.855 34.615 8.23 0.00 0.00 1.82
7300 10289 5.631929 GGTCTTTTTCCGCGAATAAACAATT 59.368 36.000 8.23 0.00 0.00 2.32
7301 10290 5.158494 GGTCTTTTTCCGCGAATAAACAAT 58.842 37.500 8.23 0.00 0.00 2.71
7302 10291 4.538917 GGTCTTTTTCCGCGAATAAACAA 58.461 39.130 8.23 2.64 0.00 2.83
7303 10292 3.364167 CGGTCTTTTTCCGCGAATAAACA 60.364 43.478 8.23 0.00 41.48 2.83
7304 10293 3.158268 CGGTCTTTTTCCGCGAATAAAC 58.842 45.455 8.23 0.00 41.48 2.01
7305 10294 3.458779 CGGTCTTTTTCCGCGAATAAA 57.541 42.857 8.23 1.94 41.48 1.40
7386 10376 6.985188 AGTTTTCGAATATATGTGCAGTGT 57.015 33.333 0.00 0.00 0.00 3.55
7403 10393 7.303261 CGGATCCTTTTTAGGTGTTAGTTTTC 58.697 38.462 10.75 0.00 0.00 2.29
7408 10398 3.626217 GGCGGATCCTTTTTAGGTGTTAG 59.374 47.826 10.75 0.00 0.00 2.34
7424 10414 0.625849 AGGTTTGATTCCTGGCGGAT 59.374 50.000 0.00 0.00 39.58 4.18
7435 10425 3.335579 GTCTAAAGGTCGCAGGTTTGAT 58.664 45.455 0.00 0.00 0.00 2.57
7513 10522 3.577649 ACGTGAGTCCACATTCAGTAG 57.422 47.619 0.00 0.00 44.19 2.57
7529 10538 3.426159 GCATCCCATTCAAACTACACGTG 60.426 47.826 15.48 15.48 0.00 4.49
7562 10571 2.252976 AAATTGCGTGCAAAATGGGT 57.747 40.000 11.75 0.00 39.55 4.51
7916 10967 9.210329 TGTGTGTACTCATCGTTTTGTATAATT 57.790 29.630 0.24 0.00 0.00 1.40
7921 10972 5.593968 ACTGTGTGTACTCATCGTTTTGTA 58.406 37.500 0.24 0.00 0.00 2.41
7922 10973 4.439057 ACTGTGTGTACTCATCGTTTTGT 58.561 39.130 0.24 0.00 0.00 2.83
7928 10979 9.731819 ATATTTAGTAACTGTGTGTACTCATCG 57.268 33.333 0.24 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.