Multiple sequence alignment - TraesCS4B01G131600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G131600 chr4B 100.000 2990 0 0 1 2990 171807285 171810274 0.000000e+00 5522.0
1 TraesCS4B01G131600 chr4B 90.244 2296 144 30 3 2250 634194927 634192664 0.000000e+00 2926.0
2 TraesCS4B01G131600 chr4B 88.384 2290 188 42 5 2240 72842603 72840338 0.000000e+00 2684.0
3 TraesCS4B01G131600 chr4B 93.754 1681 95 7 3 1677 656885823 656887499 0.000000e+00 2514.0
4 TraesCS4B01G131600 chr4B 92.531 1754 113 10 3 1746 672312023 672310278 0.000000e+00 2497.0
5 TraesCS4B01G131600 chr4B 85.997 707 65 16 1671 2376 37925345 37926018 0.000000e+00 726.0
6 TraesCS4B01G131600 chr4B 80.412 97 16 3 2579 2673 17879497 17879402 1.490000e-08 71.3
7 TraesCS4B01G131600 chr3B 94.233 1682 85 10 3 1678 191144990 191146665 0.000000e+00 2558.0
8 TraesCS4B01G131600 chr3B 92.308 1781 120 13 3 1774 136098617 136096845 0.000000e+00 2514.0
9 TraesCS4B01G131600 chr3B 92.294 1700 117 11 3 1696 229458030 229459721 0.000000e+00 2401.0
10 TraesCS4B01G131600 chr3B 83.214 280 24 15 2097 2370 819547595 819547333 4.980000e-58 235.0
11 TraesCS4B01G131600 chr3B 81.818 165 27 2 2210 2372 707255315 707255478 5.200000e-28 135.0
12 TraesCS4B01G131600 chr3B 81.053 95 16 2 2581 2675 625195732 625195640 1.150000e-09 75.0
13 TraesCS4B01G131600 chr3B 80.208 96 11 7 2580 2672 76487943 76487853 6.920000e-07 65.8
14 TraesCS4B01G131600 chr2B 93.508 1679 101 7 3 1678 608481165 608479492 0.000000e+00 2490.0
15 TraesCS4B01G131600 chr2B 86.988 953 82 27 1460 2377 420746760 420747705 0.000000e+00 1035.0
16 TraesCS4B01G131600 chr2B 87.752 596 34 18 1669 2251 608452468 608453037 0.000000e+00 660.0
17 TraesCS4B01G131600 chr6B 93.317 1676 100 9 3 1673 692476164 692477832 0.000000e+00 2464.0
18 TraesCS4B01G131600 chr6B 89.341 713 54 10 1669 2372 447409870 447409171 0.000000e+00 876.0
19 TraesCS4B01G131600 chr1B 87.169 717 63 16 1669 2370 684977144 684976442 0.000000e+00 787.0
20 TraesCS4B01G131600 chr1B 91.077 594 26 10 1669 2250 140290900 140291478 0.000000e+00 778.0
21 TraesCS4B01G131600 chr1B 89.358 592 37 10 1794 2370 331426484 331425904 0.000000e+00 721.0
22 TraesCS4B01G131600 chr1B 87.737 579 45 14 1671 2241 650442598 650442038 0.000000e+00 652.0
23 TraesCS4B01G131600 chr1B 88.931 524 44 10 1853 2367 42942596 42943114 4.200000e-178 634.0
24 TraesCS4B01G131600 chr1B 88.023 526 49 7 1853 2369 42835311 42835831 7.090000e-171 610.0
25 TraesCS4B01G131600 chr1B 90.646 449 32 6 1669 2113 377912705 377912263 3.320000e-164 588.0
26 TraesCS4B01G131600 chr1B 91.061 179 9 6 2077 2251 561217672 561217497 4.980000e-58 235.0
27 TraesCS4B01G131600 chr3D 88.686 601 23 22 1669 2250 583609203 583608629 0.000000e+00 691.0
28 TraesCS4B01G131600 chr5B 91.667 444 28 4 1729 2165 86235973 86236414 9.170000e-170 606.0
29 TraesCS4B01G131600 chr7B 92.233 309 20 4 1946 2251 663973225 663972918 4.580000e-118 435.0
30 TraesCS4B01G131600 chr7B 85.560 277 24 8 2097 2370 406699275 406699012 2.940000e-70 276.0
31 TraesCS4B01G131600 chr7B 86.190 210 25 4 2165 2372 112124995 112124788 1.080000e-54 224.0
32 TraesCS4B01G131600 chr7B 77.049 244 48 5 2560 2798 53252749 53252509 1.870000e-27 134.0
33 TraesCS4B01G131600 chr4D 76.427 403 72 17 2493 2884 58264585 58264195 2.350000e-46 196.0
34 TraesCS4B01G131600 chr4D 74.583 240 44 14 2501 2731 5922397 5922166 4.110000e-14 89.8
35 TraesCS4B01G131600 chr3A 82.609 161 23 5 2212 2370 533975121 533974964 1.450000e-28 137.0
36 TraesCS4B01G131600 chr3A 77.914 163 29 7 2544 2703 20771070 20771228 8.820000e-16 95.3
37 TraesCS4B01G131600 chr5D 77.095 179 35 6 2636 2809 397013719 397013542 6.820000e-17 99.0
38 TraesCS4B01G131600 chr7D 76.023 171 36 5 2640 2806 618495223 618495392 1.910000e-12 84.2
39 TraesCS4B01G131600 chr1D 76.220 164 31 8 2636 2793 469479405 469479244 2.470000e-11 80.5
40 TraesCS4B01G131600 chr2D 73.418 237 52 9 2577 2806 24221246 24221014 8.890000e-11 78.7
41 TraesCS4B01G131600 chr1A 74.595 185 35 9 2620 2797 372173022 372172843 1.490000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G131600 chr4B 171807285 171810274 2989 False 5522 5522 100.000 1 2990 1 chr4B.!!$F2 2989
1 TraesCS4B01G131600 chr4B 634192664 634194927 2263 True 2926 2926 90.244 3 2250 1 chr4B.!!$R3 2247
2 TraesCS4B01G131600 chr4B 72840338 72842603 2265 True 2684 2684 88.384 5 2240 1 chr4B.!!$R2 2235
3 TraesCS4B01G131600 chr4B 656885823 656887499 1676 False 2514 2514 93.754 3 1677 1 chr4B.!!$F3 1674
4 TraesCS4B01G131600 chr4B 672310278 672312023 1745 True 2497 2497 92.531 3 1746 1 chr4B.!!$R4 1743
5 TraesCS4B01G131600 chr4B 37925345 37926018 673 False 726 726 85.997 1671 2376 1 chr4B.!!$F1 705
6 TraesCS4B01G131600 chr3B 191144990 191146665 1675 False 2558 2558 94.233 3 1678 1 chr3B.!!$F1 1675
7 TraesCS4B01G131600 chr3B 136096845 136098617 1772 True 2514 2514 92.308 3 1774 1 chr3B.!!$R2 1771
8 TraesCS4B01G131600 chr3B 229458030 229459721 1691 False 2401 2401 92.294 3 1696 1 chr3B.!!$F2 1693
9 TraesCS4B01G131600 chr2B 608479492 608481165 1673 True 2490 2490 93.508 3 1678 1 chr2B.!!$R1 1675
10 TraesCS4B01G131600 chr2B 420746760 420747705 945 False 1035 1035 86.988 1460 2377 1 chr2B.!!$F1 917
11 TraesCS4B01G131600 chr2B 608452468 608453037 569 False 660 660 87.752 1669 2251 1 chr2B.!!$F2 582
12 TraesCS4B01G131600 chr6B 692476164 692477832 1668 False 2464 2464 93.317 3 1673 1 chr6B.!!$F1 1670
13 TraesCS4B01G131600 chr6B 447409171 447409870 699 True 876 876 89.341 1669 2372 1 chr6B.!!$R1 703
14 TraesCS4B01G131600 chr1B 684976442 684977144 702 True 787 787 87.169 1669 2370 1 chr1B.!!$R5 701
15 TraesCS4B01G131600 chr1B 140290900 140291478 578 False 778 778 91.077 1669 2250 1 chr1B.!!$F3 581
16 TraesCS4B01G131600 chr1B 331425904 331426484 580 True 721 721 89.358 1794 2370 1 chr1B.!!$R1 576
17 TraesCS4B01G131600 chr1B 650442038 650442598 560 True 652 652 87.737 1671 2241 1 chr1B.!!$R4 570
18 TraesCS4B01G131600 chr1B 42942596 42943114 518 False 634 634 88.931 1853 2367 1 chr1B.!!$F2 514
19 TraesCS4B01G131600 chr1B 42835311 42835831 520 False 610 610 88.023 1853 2369 1 chr1B.!!$F1 516
20 TraesCS4B01G131600 chr3D 583608629 583609203 574 True 691 691 88.686 1669 2250 1 chr3D.!!$R1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
312 327 0.244178 GAAGGCGTCGAGGAAGAAGT 59.756 55.0 9.75 0.0 0.0 3.01 F
1254 1281 0.467290 GAAGCCCCACACCAAACTCA 60.467 55.0 0.00 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 2043 1.285078 TCCTCATCTTCCTCCGACTCA 59.715 52.381 0.0 0.0 0.00 3.41 R
2930 3085 0.025513 GCTGCGCGAACAGTATTCTG 59.974 55.000 12.1 0.0 46.18 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.546589 ATCCTACAACCGCGAACCCA 61.547 55.000 8.23 0.00 0.00 4.51
140 153 2.747460 GCGTGGCCTCTTCATGCA 60.747 61.111 3.32 0.00 44.14 3.96
146 159 3.207669 CCTCTTCATGCAGCCGCC 61.208 66.667 0.00 0.00 37.32 6.13
218 233 4.020617 TGCACCCCCTCGAAGCTG 62.021 66.667 0.00 0.00 0.00 4.24
312 327 0.244178 GAAGGCGTCGAGGAAGAAGT 59.756 55.000 9.75 0.00 0.00 3.01
402 420 1.278337 GCGCACAATGTGTTCGACA 59.722 52.632 15.36 0.00 39.26 4.35
419 437 2.878406 CGACAATATGCCCCAAAGGTAG 59.122 50.000 0.00 0.00 38.26 3.18
424 442 5.963865 ACAATATGCCCCAAAGGTAGAAAAT 59.036 36.000 0.00 0.00 38.26 1.82
534 555 4.271776 ACGATGATGCATACATGTCAACTG 59.728 41.667 0.00 0.00 36.35 3.16
548 569 1.152756 AACTGTGGGTGTTGGCTCC 60.153 57.895 0.00 0.00 0.00 4.70
617 638 1.212229 GTTCGAGGTGGACGAGGAC 59.788 63.158 0.00 0.00 40.72 3.85
758 779 6.418101 TCAAAGTAGAGATGCTTATTGGCTT 58.582 36.000 0.00 0.00 0.00 4.35
789 810 2.949714 ACACTTTGATCTTCGCAACG 57.050 45.000 0.00 0.00 0.00 4.10
791 812 2.221055 ACACTTTGATCTTCGCAACGTC 59.779 45.455 0.00 0.00 0.00 4.34
823 844 2.103143 CTCCGCACGATCGCTTCT 59.897 61.111 16.60 0.00 0.00 2.85
1004 1027 7.386299 TGTGCTAACTTGTTTTGTTTTCATGTT 59.614 29.630 0.00 0.00 35.08 2.71
1076 1099 5.254972 AGAAGGGGAAGATCAAGAAAGGAAT 59.745 40.000 0.00 0.00 0.00 3.01
1254 1281 0.467290 GAAGCCCCACACCAAACTCA 60.467 55.000 0.00 0.00 0.00 3.41
1290 1317 1.969589 AAAACGACCGGATGGCACC 60.970 57.895 9.46 0.00 39.70 5.01
1355 1382 5.255687 TGAGCTCAAAAATGCTATGGAAGA 58.744 37.500 15.67 0.00 39.91 2.87
1364 1391 8.653338 CAAAAATGCTATGGAAGAAATTGTCAG 58.347 33.333 0.00 0.00 0.00 3.51
1516 1543 2.769621 TGGGCATGGAGGAGCGAT 60.770 61.111 0.00 0.00 0.00 4.58
1529 1556 3.545703 AGGAGCGATCTAAATTGTTGGG 58.454 45.455 0.00 0.00 0.00 4.12
1585 1612 3.639716 TGTTCAATGATGCGCAAAAGA 57.360 38.095 17.11 5.68 0.00 2.52
2049 2170 6.111382 TGCATTTTGAACTTGGTTGAATGAA 58.889 32.000 0.00 0.00 0.00 2.57
2050 2174 6.036953 TGCATTTTGAACTTGGTTGAATGAAC 59.963 34.615 0.00 0.00 0.00 3.18
2140 2290 9.518906 TTGTGATTCAAATTATATGTCATGTGC 57.481 29.630 0.00 0.00 32.64 4.57
2263 2418 1.795569 CGCGCGTGCTGCATTTTAA 60.796 52.632 24.19 0.00 46.97 1.52
2334 2489 2.324860 GTGCCGCAAACCAGATTTTAC 58.675 47.619 0.00 0.00 0.00 2.01
2376 2531 2.237143 TGTTGGAGATGCTCTTAGGTGG 59.763 50.000 0.00 0.00 0.00 4.61
2377 2532 1.500474 TGGAGATGCTCTTAGGTGGG 58.500 55.000 0.00 0.00 0.00 4.61
2378 2533 1.008327 TGGAGATGCTCTTAGGTGGGA 59.992 52.381 0.00 0.00 0.00 4.37
2379 2534 1.414550 GGAGATGCTCTTAGGTGGGAC 59.585 57.143 0.00 0.00 0.00 4.46
2380 2535 2.393646 GAGATGCTCTTAGGTGGGACT 58.606 52.381 0.00 0.00 0.00 3.85
2381 2536 2.364002 GAGATGCTCTTAGGTGGGACTC 59.636 54.545 0.00 0.00 0.00 3.36
2382 2537 2.023501 AGATGCTCTTAGGTGGGACTCT 60.024 50.000 0.00 0.00 0.00 3.24
2383 2538 1.561643 TGCTCTTAGGTGGGACTCTG 58.438 55.000 0.00 0.00 0.00 3.35
2384 2539 1.203187 TGCTCTTAGGTGGGACTCTGT 60.203 52.381 0.00 0.00 0.00 3.41
2385 2540 1.205893 GCTCTTAGGTGGGACTCTGTG 59.794 57.143 0.00 0.00 0.00 3.66
2386 2541 1.205893 CTCTTAGGTGGGACTCTGTGC 59.794 57.143 0.00 0.00 0.00 4.57
2387 2542 1.203187 TCTTAGGTGGGACTCTGTGCT 60.203 52.381 0.00 0.00 0.00 4.40
2388 2543 1.625818 CTTAGGTGGGACTCTGTGCTT 59.374 52.381 0.00 0.00 0.00 3.91
2389 2544 1.267121 TAGGTGGGACTCTGTGCTTC 58.733 55.000 0.00 0.00 0.00 3.86
2390 2545 1.003233 GGTGGGACTCTGTGCTTCC 60.003 63.158 0.00 0.00 0.00 3.46
2391 2546 1.754745 GTGGGACTCTGTGCTTCCA 59.245 57.895 0.00 0.00 0.00 3.53
2392 2547 0.326264 GTGGGACTCTGTGCTTCCAT 59.674 55.000 0.00 0.00 0.00 3.41
2393 2548 1.067295 TGGGACTCTGTGCTTCCATT 58.933 50.000 0.00 0.00 0.00 3.16
2394 2549 1.003580 TGGGACTCTGTGCTTCCATTC 59.996 52.381 0.00 0.00 0.00 2.67
2395 2550 1.363744 GGACTCTGTGCTTCCATTCG 58.636 55.000 0.00 0.00 0.00 3.34
2396 2551 0.723981 GACTCTGTGCTTCCATTCGC 59.276 55.000 0.00 0.00 0.00 4.70
2397 2552 1.016130 ACTCTGTGCTTCCATTCGCG 61.016 55.000 0.00 0.00 0.00 5.87
2398 2553 1.005037 TCTGTGCTTCCATTCGCGT 60.005 52.632 5.77 0.00 0.00 6.01
2399 2554 0.245266 TCTGTGCTTCCATTCGCGTA 59.755 50.000 5.77 0.00 0.00 4.42
2400 2555 1.075542 CTGTGCTTCCATTCGCGTAA 58.924 50.000 5.77 0.00 0.00 3.18
2401 2556 0.793861 TGTGCTTCCATTCGCGTAAC 59.206 50.000 5.77 0.00 0.00 2.50
2402 2557 1.076332 GTGCTTCCATTCGCGTAACT 58.924 50.000 5.77 0.00 0.00 2.24
2403 2558 1.075542 TGCTTCCATTCGCGTAACTG 58.924 50.000 5.77 0.00 0.00 3.16
2404 2559 0.373716 GCTTCCATTCGCGTAACTGG 59.626 55.000 5.77 9.23 0.00 4.00
2405 2560 1.006832 CTTCCATTCGCGTAACTGGG 58.993 55.000 5.77 0.63 0.00 4.45
2406 2561 0.322322 TTCCATTCGCGTAACTGGGT 59.678 50.000 5.77 0.00 0.00 4.51
2407 2562 1.184431 TCCATTCGCGTAACTGGGTA 58.816 50.000 5.77 0.00 0.00 3.69
2408 2563 1.135527 TCCATTCGCGTAACTGGGTAG 59.864 52.381 5.77 0.00 0.00 3.18
2409 2564 0.928229 CATTCGCGTAACTGGGTAGC 59.072 55.000 5.77 0.00 0.00 3.58
2410 2565 0.533491 ATTCGCGTAACTGGGTAGCA 59.467 50.000 5.77 0.00 0.00 3.49
2411 2566 0.317799 TTCGCGTAACTGGGTAGCAA 59.682 50.000 5.77 0.00 0.00 3.91
2412 2567 0.317799 TCGCGTAACTGGGTAGCAAA 59.682 50.000 5.77 0.00 0.00 3.68
2413 2568 1.149987 CGCGTAACTGGGTAGCAAAA 58.850 50.000 0.00 0.00 0.00 2.44
2414 2569 1.532007 CGCGTAACTGGGTAGCAAAAA 59.468 47.619 0.00 0.00 0.00 1.94
2415 2570 2.412325 CGCGTAACTGGGTAGCAAAAAG 60.412 50.000 0.00 0.00 0.00 2.27
2416 2571 2.809696 GCGTAACTGGGTAGCAAAAAGA 59.190 45.455 0.00 0.00 0.00 2.52
2417 2572 3.439129 GCGTAACTGGGTAGCAAAAAGAT 59.561 43.478 0.00 0.00 0.00 2.40
2418 2573 4.082949 GCGTAACTGGGTAGCAAAAAGATT 60.083 41.667 0.00 0.00 0.00 2.40
2419 2574 5.122711 GCGTAACTGGGTAGCAAAAAGATTA 59.877 40.000 0.00 0.00 0.00 1.75
2420 2575 6.674760 GCGTAACTGGGTAGCAAAAAGATTAG 60.675 42.308 0.00 0.00 0.00 1.73
2421 2576 6.592607 CGTAACTGGGTAGCAAAAAGATTAGA 59.407 38.462 0.00 0.00 0.00 2.10
2422 2577 7.118680 CGTAACTGGGTAGCAAAAAGATTAGAA 59.881 37.037 0.00 0.00 0.00 2.10
2423 2578 7.454260 AACTGGGTAGCAAAAAGATTAGAAG 57.546 36.000 0.00 0.00 0.00 2.85
2424 2579 6.779860 ACTGGGTAGCAAAAAGATTAGAAGA 58.220 36.000 0.00 0.00 0.00 2.87
2425 2580 7.231467 ACTGGGTAGCAAAAAGATTAGAAGAA 58.769 34.615 0.00 0.00 0.00 2.52
2426 2581 7.724061 ACTGGGTAGCAAAAAGATTAGAAGAAA 59.276 33.333 0.00 0.00 0.00 2.52
2427 2582 8.472007 TGGGTAGCAAAAAGATTAGAAGAAAA 57.528 30.769 0.00 0.00 0.00 2.29
2428 2583 9.088987 TGGGTAGCAAAAAGATTAGAAGAAAAT 57.911 29.630 0.00 0.00 0.00 1.82
2429 2584 9.358872 GGGTAGCAAAAAGATTAGAAGAAAATG 57.641 33.333 0.00 0.00 0.00 2.32
2433 2588 9.082313 AGCAAAAAGATTAGAAGAAAATGAGGA 57.918 29.630 0.00 0.00 0.00 3.71
2434 2589 9.696917 GCAAAAAGATTAGAAGAAAATGAGGAA 57.303 29.630 0.00 0.00 0.00 3.36
2438 2593 9.866798 AAAGATTAGAAGAAAATGAGGAAATGC 57.133 29.630 0.00 0.00 0.00 3.56
2439 2594 7.701445 AGATTAGAAGAAAATGAGGAAATGCG 58.299 34.615 0.00 0.00 0.00 4.73
2440 2595 6.817765 TTAGAAGAAAATGAGGAAATGCGT 57.182 33.333 0.00 0.00 0.00 5.24
2441 2596 7.915293 TTAGAAGAAAATGAGGAAATGCGTA 57.085 32.000 0.00 0.00 0.00 4.42
2442 2597 6.817765 AGAAGAAAATGAGGAAATGCGTAA 57.182 33.333 0.00 0.00 0.00 3.18
2443 2598 7.396540 AGAAGAAAATGAGGAAATGCGTAAT 57.603 32.000 0.00 0.00 0.00 1.89
2444 2599 7.253422 AGAAGAAAATGAGGAAATGCGTAATG 58.747 34.615 0.00 0.00 0.00 1.90
2445 2600 6.515272 AGAAAATGAGGAAATGCGTAATGT 57.485 33.333 0.00 0.00 0.00 2.71
2446 2601 6.924111 AGAAAATGAGGAAATGCGTAATGTT 58.076 32.000 0.00 0.00 0.00 2.71
2447 2602 7.378181 AGAAAATGAGGAAATGCGTAATGTTT 58.622 30.769 0.00 0.00 0.00 2.83
2448 2603 7.872483 AGAAAATGAGGAAATGCGTAATGTTTT 59.128 29.630 0.00 0.00 0.00 2.43
2449 2604 7.961325 AAATGAGGAAATGCGTAATGTTTTT 57.039 28.000 0.00 0.00 0.00 1.94
2487 2642 6.928348 TCATGTATGTACCACTAATAGGGG 57.072 41.667 7.09 7.09 46.86 4.79
2488 2643 6.626238 TCATGTATGTACCACTAATAGGGGA 58.374 40.000 16.73 0.00 43.10 4.81
2489 2644 7.253421 TCATGTATGTACCACTAATAGGGGAT 58.747 38.462 16.73 0.77 43.10 3.85
2490 2645 8.403474 TCATGTATGTACCACTAATAGGGGATA 58.597 37.037 16.73 0.00 43.10 2.59
2491 2646 8.475639 CATGTATGTACCACTAATAGGGGATAC 58.524 40.741 16.73 12.82 43.10 2.24
2492 2647 7.537513 TGTATGTACCACTAATAGGGGATACA 58.462 38.462 16.73 18.21 43.10 2.29
2493 2648 8.011883 TGTATGTACCACTAATAGGGGATACAA 58.988 37.037 16.73 8.24 43.10 2.41
2494 2649 7.941053 ATGTACCACTAATAGGGGATACAAA 57.059 36.000 16.73 0.62 43.10 2.83
2495 2650 7.752518 TGTACCACTAATAGGGGATACAAAA 57.247 36.000 16.73 0.00 43.10 2.44
2496 2651 7.798071 TGTACCACTAATAGGGGATACAAAAG 58.202 38.462 16.73 0.00 43.10 2.27
2497 2652 5.691896 ACCACTAATAGGGGATACAAAAGC 58.308 41.667 16.73 0.00 43.10 3.51
2498 2653 5.192923 ACCACTAATAGGGGATACAAAAGCA 59.807 40.000 16.73 0.00 43.10 3.91
2499 2654 5.765182 CCACTAATAGGGGATACAAAAGCAG 59.235 44.000 1.37 0.00 43.10 4.24
2500 2655 6.409234 CCACTAATAGGGGATACAAAAGCAGA 60.409 42.308 1.37 0.00 43.10 4.26
2501 2656 7.227156 CACTAATAGGGGATACAAAAGCAGAT 58.773 38.462 0.00 0.00 39.74 2.90
2502 2657 8.375506 CACTAATAGGGGATACAAAAGCAGATA 58.624 37.037 0.00 0.00 39.74 1.98
2503 2658 9.117223 ACTAATAGGGGATACAAAAGCAGATAT 57.883 33.333 0.00 0.00 39.74 1.63
2504 2659 9.965902 CTAATAGGGGATACAAAAGCAGATATT 57.034 33.333 0.00 0.00 39.74 1.28
2509 2664 9.660544 AGGGGATACAAAAGCAGATATTTAATT 57.339 29.630 0.00 0.00 39.74 1.40
2510 2665 9.914131 GGGGATACAAAAGCAGATATTTAATTC 57.086 33.333 0.00 0.00 39.74 2.17
2511 2666 9.612620 GGGATACAAAAGCAGATATTTAATTCG 57.387 33.333 0.00 0.00 39.74 3.34
2512 2667 9.612620 GGATACAAAAGCAGATATTTAATTCGG 57.387 33.333 0.00 0.00 0.00 4.30
2514 2669 9.950680 ATACAAAAGCAGATATTTAATTCGGTG 57.049 29.630 0.00 0.00 0.00 4.94
2515 2670 6.751888 ACAAAAGCAGATATTTAATTCGGTGC 59.248 34.615 0.00 0.00 0.00 5.01
2516 2671 5.438761 AAGCAGATATTTAATTCGGTGCC 57.561 39.130 0.00 0.00 0.00 5.01
2517 2672 3.821033 AGCAGATATTTAATTCGGTGCCC 59.179 43.478 0.00 0.00 0.00 5.36
2518 2673 3.568007 GCAGATATTTAATTCGGTGCCCA 59.432 43.478 0.00 0.00 0.00 5.36
2519 2674 4.320494 GCAGATATTTAATTCGGTGCCCAG 60.320 45.833 0.00 0.00 0.00 4.45
2520 2675 4.216257 CAGATATTTAATTCGGTGCCCAGG 59.784 45.833 0.00 0.00 0.00 4.45
2521 2676 2.525105 ATTTAATTCGGTGCCCAGGT 57.475 45.000 0.00 0.00 0.00 4.00
2522 2677 2.296073 TTTAATTCGGTGCCCAGGTT 57.704 45.000 0.00 0.00 0.00 3.50
2523 2678 2.296073 TTAATTCGGTGCCCAGGTTT 57.704 45.000 0.00 0.00 0.00 3.27
2524 2679 3.436577 TTAATTCGGTGCCCAGGTTTA 57.563 42.857 0.00 0.00 0.00 2.01
2525 2680 2.525105 AATTCGGTGCCCAGGTTTAT 57.475 45.000 0.00 0.00 0.00 1.40
2526 2681 2.052782 ATTCGGTGCCCAGGTTTATC 57.947 50.000 0.00 0.00 0.00 1.75
2527 2682 0.988832 TTCGGTGCCCAGGTTTATCT 59.011 50.000 0.00 0.00 0.00 1.98
2528 2683 0.988832 TCGGTGCCCAGGTTTATCTT 59.011 50.000 0.00 0.00 0.00 2.40
2529 2684 1.065709 TCGGTGCCCAGGTTTATCTTC 60.066 52.381 0.00 0.00 0.00 2.87
2530 2685 1.339631 CGGTGCCCAGGTTTATCTTCA 60.340 52.381 0.00 0.00 0.00 3.02
2531 2686 2.683742 CGGTGCCCAGGTTTATCTTCAT 60.684 50.000 0.00 0.00 0.00 2.57
2532 2687 2.952310 GGTGCCCAGGTTTATCTTCATC 59.048 50.000 0.00 0.00 0.00 2.92
2533 2688 2.952310 GTGCCCAGGTTTATCTTCATCC 59.048 50.000 0.00 0.00 0.00 3.51
2534 2689 2.222027 GCCCAGGTTTATCTTCATCCG 58.778 52.381 0.00 0.00 0.00 4.18
2535 2690 2.851195 CCCAGGTTTATCTTCATCCGG 58.149 52.381 0.00 0.00 0.00 5.14
2536 2691 2.172717 CCCAGGTTTATCTTCATCCGGT 59.827 50.000 0.00 0.00 0.00 5.28
2537 2692 3.206150 CCAGGTTTATCTTCATCCGGTG 58.794 50.000 0.00 0.00 0.00 4.94
2538 2693 3.118408 CCAGGTTTATCTTCATCCGGTGA 60.118 47.826 0.00 1.42 34.25 4.02
2539 2694 4.513442 CAGGTTTATCTTCATCCGGTGAA 58.487 43.478 15.60 15.60 44.36 3.18
2540 2695 5.126067 CAGGTTTATCTTCATCCGGTGAAT 58.874 41.667 16.44 8.34 45.36 2.57
2541 2696 6.288294 CAGGTTTATCTTCATCCGGTGAATA 58.712 40.000 16.44 11.66 45.36 1.75
2542 2697 6.425114 CAGGTTTATCTTCATCCGGTGAATAG 59.575 42.308 16.44 8.82 45.36 1.73
2543 2698 6.099845 AGGTTTATCTTCATCCGGTGAATAGT 59.900 38.462 16.44 10.06 45.36 2.12
2544 2699 7.289317 AGGTTTATCTTCATCCGGTGAATAGTA 59.711 37.037 16.44 9.36 45.36 1.82
2545 2700 7.929785 GGTTTATCTTCATCCGGTGAATAGTAA 59.070 37.037 16.44 13.07 45.36 2.24
2546 2701 9.321562 GTTTATCTTCATCCGGTGAATAGTAAA 57.678 33.333 16.44 16.36 45.36 2.01
2547 2702 9.893634 TTTATCTTCATCCGGTGAATAGTAAAA 57.106 29.630 16.44 11.31 45.36 1.52
2548 2703 9.893634 TTATCTTCATCCGGTGAATAGTAAAAA 57.106 29.630 16.44 5.79 45.36 1.94
2602 2757 4.994907 TTTTGGATGCAAGATGATCCAG 57.005 40.909 4.73 0.00 46.93 3.86
2603 2758 3.657398 TTGGATGCAAGATGATCCAGT 57.343 42.857 4.73 0.00 46.93 4.00
2604 2759 4.776435 TTGGATGCAAGATGATCCAGTA 57.224 40.909 4.73 0.00 46.93 2.74
2605 2760 4.077300 TGGATGCAAGATGATCCAGTAC 57.923 45.455 0.20 0.00 42.67 2.73
2606 2761 3.062763 GGATGCAAGATGATCCAGTACG 58.937 50.000 0.00 0.00 38.46 3.67
2607 2762 1.939974 TGCAAGATGATCCAGTACGC 58.060 50.000 0.00 0.00 0.00 4.42
2608 2763 1.221414 GCAAGATGATCCAGTACGCC 58.779 55.000 0.00 0.00 0.00 5.68
2609 2764 1.473257 GCAAGATGATCCAGTACGCCA 60.473 52.381 0.00 0.00 0.00 5.69
2610 2765 2.477825 CAAGATGATCCAGTACGCCAG 58.522 52.381 0.00 0.00 0.00 4.85
2611 2766 1.043816 AGATGATCCAGTACGCCAGG 58.956 55.000 0.00 0.00 0.00 4.45
2612 2767 0.034059 GATGATCCAGTACGCCAGGG 59.966 60.000 0.00 0.00 0.00 4.45
2613 2768 1.410850 ATGATCCAGTACGCCAGGGG 61.411 60.000 0.84 0.84 0.00 4.79
2614 2769 2.040606 ATCCAGTACGCCAGGGGT 59.959 61.111 14.67 14.67 0.00 4.95
2615 2770 2.029307 GATCCAGTACGCCAGGGGTC 62.029 65.000 13.54 5.26 0.00 4.46
2616 2771 2.531483 ATCCAGTACGCCAGGGGTCT 62.531 60.000 13.54 7.55 0.00 3.85
2617 2772 2.579201 CAGTACGCCAGGGGTCTG 59.421 66.667 13.54 15.41 40.59 3.51
2618 2773 2.119832 AGTACGCCAGGGGTCTGT 59.880 61.111 13.54 0.00 39.31 3.41
2619 2774 0.968901 CAGTACGCCAGGGGTCTGTA 60.969 60.000 13.54 0.00 39.31 2.74
2620 2775 0.251922 AGTACGCCAGGGGTCTGTAA 60.252 55.000 13.54 0.00 39.31 2.41
2621 2776 0.609662 GTACGCCAGGGGTCTGTAAA 59.390 55.000 13.54 0.00 39.31 2.01
2622 2777 1.002315 GTACGCCAGGGGTCTGTAAAA 59.998 52.381 13.54 0.00 39.31 1.52
2623 2778 0.696501 ACGCCAGGGGTCTGTAAAAT 59.303 50.000 2.50 0.00 39.31 1.82
2624 2779 1.074889 ACGCCAGGGGTCTGTAAAATT 59.925 47.619 2.50 0.00 39.31 1.82
2625 2780 2.167662 CGCCAGGGGTCTGTAAAATTT 58.832 47.619 0.00 0.00 39.31 1.82
2626 2781 2.163613 CGCCAGGGGTCTGTAAAATTTC 59.836 50.000 0.00 0.00 39.31 2.17
2627 2782 2.163613 GCCAGGGGTCTGTAAAATTTCG 59.836 50.000 0.00 0.00 39.31 3.46
2628 2783 3.418047 CCAGGGGTCTGTAAAATTTCGT 58.582 45.455 0.00 0.00 39.31 3.85
2629 2784 3.190535 CCAGGGGTCTGTAAAATTTCGTG 59.809 47.826 0.00 0.00 39.31 4.35
2630 2785 3.190535 CAGGGGTCTGTAAAATTTCGTGG 59.809 47.826 0.00 0.00 36.30 4.94
2631 2786 2.094906 GGGGTCTGTAAAATTTCGTGGC 60.095 50.000 0.00 0.00 0.00 5.01
2632 2787 2.817844 GGGTCTGTAAAATTTCGTGGCT 59.182 45.455 0.00 0.00 0.00 4.75
2633 2788 4.004982 GGGTCTGTAAAATTTCGTGGCTA 58.995 43.478 0.00 0.00 0.00 3.93
2634 2789 4.456566 GGGTCTGTAAAATTTCGTGGCTAA 59.543 41.667 0.00 0.00 0.00 3.09
2635 2790 5.124936 GGGTCTGTAAAATTTCGTGGCTAAT 59.875 40.000 0.00 0.00 0.00 1.73
2636 2791 6.349860 GGGTCTGTAAAATTTCGTGGCTAATT 60.350 38.462 0.00 0.00 0.00 1.40
2637 2792 6.526674 GGTCTGTAAAATTTCGTGGCTAATTG 59.473 38.462 0.00 0.00 0.00 2.32
2638 2793 6.526674 GTCTGTAAAATTTCGTGGCTAATTGG 59.473 38.462 0.00 0.00 0.00 3.16
2639 2794 5.164954 TGTAAAATTTCGTGGCTAATTGGC 58.835 37.500 5.01 5.01 42.18 4.52
2648 2803 3.098774 TGGCTAATTGGCATTTGAGGA 57.901 42.857 16.20 0.00 46.76 3.71
2649 2804 3.025978 TGGCTAATTGGCATTTGAGGAG 58.974 45.455 16.20 0.00 46.76 3.69
2650 2805 2.223900 GGCTAATTGGCATTTGAGGAGC 60.224 50.000 16.20 5.66 41.37 4.70
2651 2806 2.692041 GCTAATTGGCATTTGAGGAGCT 59.308 45.455 9.17 0.00 0.00 4.09
2652 2807 3.243334 GCTAATTGGCATTTGAGGAGCTC 60.243 47.826 9.17 4.71 0.00 4.09
2653 2808 1.386533 ATTGGCATTTGAGGAGCTCG 58.613 50.000 7.83 0.00 32.35 5.03
2654 2809 0.036732 TTGGCATTTGAGGAGCTCGT 59.963 50.000 9.04 9.04 32.35 4.18
2655 2810 0.674581 TGGCATTTGAGGAGCTCGTG 60.675 55.000 14.78 0.00 32.35 4.35
2656 2811 1.372087 GGCATTTGAGGAGCTCGTGG 61.372 60.000 14.78 0.00 32.35 4.94
2657 2812 1.986575 GCATTTGAGGAGCTCGTGGC 61.987 60.000 14.78 5.84 42.19 5.01
2658 2813 0.674581 CATTTGAGGAGCTCGTGGCA 60.675 55.000 14.78 3.54 44.79 4.92
2659 2814 0.036732 ATTTGAGGAGCTCGTGGCAA 59.963 50.000 14.78 9.89 44.79 4.52
2660 2815 0.179032 TTTGAGGAGCTCGTGGCAAA 60.179 50.000 14.78 15.17 44.79 3.68
2661 2816 0.179032 TTGAGGAGCTCGTGGCAAAA 60.179 50.000 14.78 0.00 44.79 2.44
2662 2817 0.179032 TGAGGAGCTCGTGGCAAAAA 60.179 50.000 14.78 0.00 44.79 1.94
2687 2842 9.705290 AAAGACAAAATAAGTTTCAAACACTGT 57.295 25.926 2.41 0.00 0.00 3.55
2688 2843 9.705290 AAGACAAAATAAGTTTCAAACACTGTT 57.295 25.926 2.41 0.00 0.00 3.16
2689 2844 9.139174 AGACAAAATAAGTTTCAAACACTGTTG 57.861 29.630 2.41 3.11 0.00 3.33
2690 2845 8.825667 ACAAAATAAGTTTCAAACACTGTTGT 57.174 26.923 2.41 3.70 37.67 3.32
2703 2858 6.859420 AACACTGTTGTTTTCAAAAGCTTT 57.141 29.167 5.69 5.69 46.14 3.51
2704 2859 6.859420 ACACTGTTGTTTTCAAAAGCTTTT 57.141 29.167 18.74 18.74 46.14 2.27
2705 2860 7.954788 ACACTGTTGTTTTCAAAAGCTTTTA 57.045 28.000 23.44 7.21 46.14 1.52
2706 2861 7.792925 ACACTGTTGTTTTCAAAAGCTTTTAC 58.207 30.769 23.44 17.76 46.14 2.01
2707 2862 7.439655 ACACTGTTGTTTTCAAAAGCTTTTACA 59.560 29.630 23.44 19.97 46.14 2.41
2708 2863 7.951565 CACTGTTGTTTTCAAAAGCTTTTACAG 59.048 33.333 29.68 29.68 46.14 2.74
2709 2864 7.117667 ACTGTTGTTTTCAAAAGCTTTTACAGG 59.882 33.333 32.00 22.84 46.14 4.00
2710 2865 6.128418 TGTTGTTTTCAAAAGCTTTTACAGGC 60.128 34.615 23.44 18.10 41.76 4.85
2711 2866 5.729510 TGTTTTCAAAAGCTTTTACAGGCT 58.270 33.333 23.44 0.00 40.85 4.58
2712 2867 5.810074 TGTTTTCAAAAGCTTTTACAGGCTC 59.190 36.000 23.44 11.48 37.87 4.70
2713 2868 3.896648 TCAAAAGCTTTTACAGGCTCG 57.103 42.857 23.44 9.38 37.87 5.03
2714 2869 3.472652 TCAAAAGCTTTTACAGGCTCGA 58.527 40.909 23.44 11.50 37.87 4.04
2715 2870 3.880490 TCAAAAGCTTTTACAGGCTCGAA 59.120 39.130 23.44 0.00 37.87 3.71
2716 2871 4.336993 TCAAAAGCTTTTACAGGCTCGAAA 59.663 37.500 23.44 0.00 37.87 3.46
2717 2872 5.009610 TCAAAAGCTTTTACAGGCTCGAAAT 59.990 36.000 23.44 0.00 37.87 2.17
2718 2873 5.453567 AAAGCTTTTACAGGCTCGAAATT 57.546 34.783 5.69 0.00 37.87 1.82
2719 2874 5.453567 AAGCTTTTACAGGCTCGAAATTT 57.546 34.783 0.00 0.00 37.87 1.82
2720 2875 6.569179 AAGCTTTTACAGGCTCGAAATTTA 57.431 33.333 0.00 0.00 37.87 1.40
2721 2876 6.759497 AGCTTTTACAGGCTCGAAATTTAT 57.241 33.333 0.00 0.00 32.98 1.40
2722 2877 6.786207 AGCTTTTACAGGCTCGAAATTTATC 58.214 36.000 0.00 0.00 32.98 1.75
2723 2878 6.374333 AGCTTTTACAGGCTCGAAATTTATCA 59.626 34.615 0.00 0.00 32.98 2.15
2724 2879 7.067494 AGCTTTTACAGGCTCGAAATTTATCAT 59.933 33.333 0.00 0.00 32.98 2.45
2725 2880 7.702348 GCTTTTACAGGCTCGAAATTTATCATT 59.298 33.333 0.00 0.00 0.00 2.57
2726 2881 9.573133 CTTTTACAGGCTCGAAATTTATCATTT 57.427 29.630 0.00 0.00 0.00 2.32
2727 2882 9.921637 TTTTACAGGCTCGAAATTTATCATTTT 57.078 25.926 0.00 0.00 0.00 1.82
2728 2883 9.921637 TTTACAGGCTCGAAATTTATCATTTTT 57.078 25.926 0.00 0.00 0.00 1.94
2767 2922 9.476202 AAATGTCTAAACTTCACAAAATTAGCC 57.524 29.630 0.00 0.00 0.00 3.93
2768 2923 7.575414 TGTCTAAACTTCACAAAATTAGCCA 57.425 32.000 0.00 0.00 0.00 4.75
2769 2924 7.422399 TGTCTAAACTTCACAAAATTAGCCAC 58.578 34.615 0.00 0.00 0.00 5.01
2770 2925 6.577427 GTCTAAACTTCACAAAATTAGCCACG 59.423 38.462 0.00 0.00 0.00 4.94
2771 2926 3.915437 ACTTCACAAAATTAGCCACGG 57.085 42.857 0.00 0.00 0.00 4.94
2772 2927 3.482436 ACTTCACAAAATTAGCCACGGA 58.518 40.909 0.00 0.00 0.00 4.69
2773 2928 4.079253 ACTTCACAAAATTAGCCACGGAT 58.921 39.130 0.00 0.00 0.00 4.18
2774 2929 4.522789 ACTTCACAAAATTAGCCACGGATT 59.477 37.500 0.00 0.00 0.00 3.01
2775 2930 5.010617 ACTTCACAAAATTAGCCACGGATTT 59.989 36.000 0.00 0.00 0.00 2.17
2776 2931 5.054390 TCACAAAATTAGCCACGGATTTC 57.946 39.130 0.00 0.00 0.00 2.17
2777 2932 4.520874 TCACAAAATTAGCCACGGATTTCA 59.479 37.500 0.00 0.00 0.00 2.69
2778 2933 5.184864 TCACAAAATTAGCCACGGATTTCAT 59.815 36.000 0.00 0.00 0.00 2.57
2779 2934 5.289193 CACAAAATTAGCCACGGATTTCATG 59.711 40.000 0.00 0.00 0.00 3.07
2780 2935 3.715628 AATTAGCCACGGATTTCATGC 57.284 42.857 0.00 0.00 0.00 4.06
2781 2936 2.121291 TTAGCCACGGATTTCATGCA 57.879 45.000 0.00 0.00 0.00 3.96
2782 2937 1.378531 TAGCCACGGATTTCATGCAC 58.621 50.000 0.00 0.00 0.00 4.57
2783 2938 0.608856 AGCCACGGATTTCATGCACA 60.609 50.000 0.00 0.00 0.00 4.57
2784 2939 0.457035 GCCACGGATTTCATGCACAT 59.543 50.000 0.00 0.00 0.00 3.21
2785 2940 1.135024 GCCACGGATTTCATGCACATT 60.135 47.619 0.00 0.00 0.00 2.71
2786 2941 2.098934 GCCACGGATTTCATGCACATTA 59.901 45.455 0.00 0.00 0.00 1.90
2787 2942 3.793129 GCCACGGATTTCATGCACATTAG 60.793 47.826 0.00 0.00 0.00 1.73
2788 2943 3.365832 CACGGATTTCATGCACATTAGC 58.634 45.455 0.00 0.00 0.00 3.09
2789 2944 2.032054 ACGGATTTCATGCACATTAGCG 59.968 45.455 0.00 0.00 37.31 4.26
2790 2945 2.032054 CGGATTTCATGCACATTAGCGT 59.968 45.455 0.00 0.00 37.31 5.07
2791 2946 3.621794 GGATTTCATGCACATTAGCGTC 58.378 45.455 0.00 0.00 37.31 5.19
2792 2947 3.313526 GGATTTCATGCACATTAGCGTCT 59.686 43.478 0.00 0.00 37.31 4.18
2793 2948 4.521943 GATTTCATGCACATTAGCGTCTC 58.478 43.478 0.00 0.00 37.31 3.36
2794 2949 1.559831 TCATGCACATTAGCGTCTCG 58.440 50.000 0.00 0.00 37.31 4.04
2813 2968 8.547091 CGTCTCGCATAACAAAAATATCATTT 57.453 30.769 0.00 0.00 0.00 2.32
2814 2969 9.009327 CGTCTCGCATAACAAAAATATCATTTT 57.991 29.630 0.00 0.00 32.89 1.82
2854 3009 7.775053 AATGATTTTACTGTTACATGTGGGT 57.225 32.000 9.11 4.50 0.00 4.51
2855 3010 6.567687 TGATTTTACTGTTACATGTGGGTG 57.432 37.500 9.11 0.00 0.00 4.61
2856 3011 4.839668 TTTTACTGTTACATGTGGGTGC 57.160 40.909 9.11 0.00 0.00 5.01
2857 3012 3.493767 TTACTGTTACATGTGGGTGCA 57.506 42.857 9.11 0.00 0.00 4.57
2858 3013 1.896220 ACTGTTACATGTGGGTGCAG 58.104 50.000 9.11 11.17 33.93 4.41
2859 3014 1.419762 ACTGTTACATGTGGGTGCAGA 59.580 47.619 9.11 0.00 32.86 4.26
2860 3015 2.040278 ACTGTTACATGTGGGTGCAGAT 59.960 45.455 9.11 0.00 32.86 2.90
2861 3016 2.421073 CTGTTACATGTGGGTGCAGATG 59.579 50.000 9.11 0.00 31.29 2.90
2862 3017 1.133025 GTTACATGTGGGTGCAGATGC 59.867 52.381 9.11 0.00 42.50 3.91
2872 3027 2.486966 GCAGATGCACCGAAAGCC 59.513 61.111 0.00 0.00 41.59 4.35
2873 3028 2.787249 CAGATGCACCGAAAGCCG 59.213 61.111 0.00 0.00 38.18 5.52
2874 3029 1.741401 CAGATGCACCGAAAGCCGA 60.741 57.895 0.00 0.00 41.76 5.54
2875 3030 1.003839 AGATGCACCGAAAGCCGAA 60.004 52.632 0.00 0.00 41.76 4.30
2876 3031 0.605319 AGATGCACCGAAAGCCGAAA 60.605 50.000 0.00 0.00 41.76 3.46
2877 3032 0.454452 GATGCACCGAAAGCCGAAAC 60.454 55.000 0.00 0.00 41.76 2.78
2878 3033 2.127383 GCACCGAAAGCCGAAACG 60.127 61.111 0.00 0.00 41.76 3.60
2879 3034 2.127383 CACCGAAAGCCGAAACGC 60.127 61.111 0.00 0.00 41.76 4.84
2880 3035 2.280592 ACCGAAAGCCGAAACGCT 60.281 55.556 0.00 0.00 42.22 5.07
2881 3036 2.173382 CCGAAAGCCGAAACGCTG 59.827 61.111 0.00 0.00 39.64 5.18
2882 3037 2.499732 CGAAAGCCGAAACGCTGC 60.500 61.111 0.00 0.00 39.64 5.25
2883 3038 2.946762 GAAAGCCGAAACGCTGCT 59.053 55.556 0.00 0.00 39.64 4.24
2884 3039 1.282875 GAAAGCCGAAACGCTGCTT 59.717 52.632 0.00 0.00 46.68 3.91
2885 3040 0.726118 GAAAGCCGAAACGCTGCTTC 60.726 55.000 0.00 0.00 44.11 3.86
2886 3041 1.444119 AAAGCCGAAACGCTGCTTCA 61.444 50.000 0.00 0.00 44.11 3.02
2887 3042 1.444119 AAGCCGAAACGCTGCTTCAA 61.444 50.000 0.00 0.00 41.23 2.69
2888 3043 1.008995 GCCGAAACGCTGCTTCAAA 60.009 52.632 0.00 0.00 0.00 2.69
2889 3044 0.998727 GCCGAAACGCTGCTTCAAAG 60.999 55.000 0.00 0.00 0.00 2.77
2890 3045 0.307760 CCGAAACGCTGCTTCAAAGT 59.692 50.000 0.00 0.00 0.00 2.66
2891 3046 1.529438 CCGAAACGCTGCTTCAAAGTA 59.471 47.619 0.00 0.00 0.00 2.24
2892 3047 2.032377 CCGAAACGCTGCTTCAAAGTAA 60.032 45.455 0.00 0.00 0.00 2.24
2893 3048 3.547214 CCGAAACGCTGCTTCAAAGTAAA 60.547 43.478 0.00 0.00 0.00 2.01
2894 3049 4.032355 CGAAACGCTGCTTCAAAGTAAAA 58.968 39.130 0.00 0.00 0.00 1.52
2895 3050 4.144731 CGAAACGCTGCTTCAAAGTAAAAG 59.855 41.667 0.00 0.00 0.00 2.27
2896 3051 3.626028 ACGCTGCTTCAAAGTAAAAGG 57.374 42.857 0.00 0.00 0.00 3.11
2897 3052 3.211045 ACGCTGCTTCAAAGTAAAAGGA 58.789 40.909 0.00 0.00 0.00 3.36
2898 3053 3.003378 ACGCTGCTTCAAAGTAAAAGGAC 59.997 43.478 0.00 0.00 0.00 3.85
2899 3054 3.003275 CGCTGCTTCAAAGTAAAAGGACA 59.997 43.478 0.00 0.00 0.00 4.02
2900 3055 4.497340 CGCTGCTTCAAAGTAAAAGGACAA 60.497 41.667 0.00 0.00 0.00 3.18
2901 3056 5.348164 GCTGCTTCAAAGTAAAAGGACAAA 58.652 37.500 0.00 0.00 0.00 2.83
2902 3057 5.985530 GCTGCTTCAAAGTAAAAGGACAAAT 59.014 36.000 0.00 0.00 0.00 2.32
2903 3058 7.145323 GCTGCTTCAAAGTAAAAGGACAAATA 58.855 34.615 0.00 0.00 0.00 1.40
2904 3059 7.651704 GCTGCTTCAAAGTAAAAGGACAAATAA 59.348 33.333 0.00 0.00 0.00 1.40
2905 3060 9.696917 CTGCTTCAAAGTAAAAGGACAAATAAT 57.303 29.630 0.00 0.00 0.00 1.28
2906 3061 9.474920 TGCTTCAAAGTAAAAGGACAAATAATG 57.525 29.630 0.00 0.00 0.00 1.90
2923 3078 9.811995 ACAAATAATGTCGTTAATAGTAGCTCA 57.188 29.630 0.00 0.00 37.96 4.26
2926 3081 9.900710 AATAATGTCGTTAATAGTAGCTCAGAG 57.099 33.333 0.00 0.00 0.00 3.35
2927 3082 5.171147 TGTCGTTAATAGTAGCTCAGAGC 57.829 43.478 15.25 15.25 42.84 4.09
2928 3083 4.036498 TGTCGTTAATAGTAGCTCAGAGCC 59.964 45.833 19.40 4.61 43.77 4.70
2929 3084 4.276431 GTCGTTAATAGTAGCTCAGAGCCT 59.724 45.833 19.40 12.22 43.77 4.58
2930 3085 4.515944 TCGTTAATAGTAGCTCAGAGCCTC 59.484 45.833 19.40 12.08 43.77 4.70
2931 3086 4.276183 CGTTAATAGTAGCTCAGAGCCTCA 59.724 45.833 19.40 1.64 43.77 3.86
2932 3087 5.561919 CGTTAATAGTAGCTCAGAGCCTCAG 60.562 48.000 19.40 0.00 43.77 3.35
2933 3088 3.874383 ATAGTAGCTCAGAGCCTCAGA 57.126 47.619 19.40 1.45 43.77 3.27
2934 3089 2.523325 AGTAGCTCAGAGCCTCAGAA 57.477 50.000 19.40 0.00 43.77 3.02
2935 3090 3.030873 AGTAGCTCAGAGCCTCAGAAT 57.969 47.619 19.40 0.81 43.77 2.40
2936 3091 4.177537 AGTAGCTCAGAGCCTCAGAATA 57.822 45.455 19.40 0.00 43.77 1.75
2937 3092 3.888930 AGTAGCTCAGAGCCTCAGAATAC 59.111 47.826 19.40 12.42 43.77 1.89
2938 3093 3.030873 AGCTCAGAGCCTCAGAATACT 57.969 47.619 19.40 0.00 43.77 2.12
2939 3094 2.694628 AGCTCAGAGCCTCAGAATACTG 59.305 50.000 19.40 0.00 43.77 2.74
2940 3095 2.430332 GCTCAGAGCCTCAGAATACTGT 59.570 50.000 11.84 0.00 39.06 3.55
2941 3096 3.118811 GCTCAGAGCCTCAGAATACTGTT 60.119 47.826 11.84 0.00 39.06 3.16
2942 3097 4.681744 CTCAGAGCCTCAGAATACTGTTC 58.318 47.826 0.00 0.00 43.81 3.18
2943 3098 3.129462 TCAGAGCCTCAGAATACTGTTCG 59.871 47.826 0.00 0.00 43.81 3.95
2944 3099 2.159170 AGAGCCTCAGAATACTGTTCGC 60.159 50.000 0.00 0.00 43.81 4.70
2945 3100 0.924090 GCCTCAGAATACTGTTCGCG 59.076 55.000 0.00 0.00 43.81 5.87
2946 3101 0.924090 CCTCAGAATACTGTTCGCGC 59.076 55.000 0.00 0.00 43.81 6.86
2947 3102 1.629013 CTCAGAATACTGTTCGCGCA 58.371 50.000 8.75 0.00 43.81 6.09
2948 3103 1.585668 CTCAGAATACTGTTCGCGCAG 59.414 52.381 8.75 11.54 43.81 5.18
2949 3104 0.025513 CAGAATACTGTTCGCGCAGC 59.974 55.000 8.75 0.00 44.35 5.25
2950 3105 2.588534 CAGAATACTGTTCGCGCAGCA 61.589 52.381 8.75 1.30 46.53 4.41
2951 3106 4.054643 CAGAATACTGTTCGCGCAGCAA 62.055 50.000 8.75 3.30 46.53 3.91
2952 3107 5.482038 CAGAATACTGTTCGCGCAGCAAA 62.482 47.826 8.75 1.06 46.53 3.68
2953 3108 6.875351 CAGAATACTGTTCGCGCAGCAAAA 62.875 45.833 8.75 0.00 46.53 2.44
2964 3119 1.059549 CGCAGCAAAATTTGAATCGGC 59.940 47.619 10.26 3.67 0.00 5.54
2965 3120 2.340337 GCAGCAAAATTTGAATCGGCT 58.660 42.857 10.26 0.00 0.00 5.52
2966 3121 3.510719 GCAGCAAAATTTGAATCGGCTA 58.489 40.909 10.26 0.00 0.00 3.93
2967 3122 3.925913 GCAGCAAAATTTGAATCGGCTAA 59.074 39.130 10.26 0.00 0.00 3.09
2968 3123 4.388469 GCAGCAAAATTTGAATCGGCTAAA 59.612 37.500 10.26 0.00 0.00 1.85
2969 3124 5.107143 GCAGCAAAATTTGAATCGGCTAAAA 60.107 36.000 10.26 0.00 0.00 1.52
2970 3125 6.298853 CAGCAAAATTTGAATCGGCTAAAAC 58.701 36.000 10.26 0.00 0.00 2.43
2971 3126 5.988561 AGCAAAATTTGAATCGGCTAAAACA 59.011 32.000 10.26 0.00 0.00 2.83
2972 3127 6.650390 AGCAAAATTTGAATCGGCTAAAACAT 59.350 30.769 10.26 0.00 0.00 2.71
2973 3128 7.816995 AGCAAAATTTGAATCGGCTAAAACATA 59.183 29.630 10.26 0.00 0.00 2.29
2974 3129 8.110002 GCAAAATTTGAATCGGCTAAAACATAG 58.890 33.333 10.26 0.00 0.00 2.23
2975 3130 7.755582 AAATTTGAATCGGCTAAAACATAGC 57.244 32.000 0.00 0.00 39.70 2.97
2976 3131 5.888691 TTTGAATCGGCTAAAACATAGCA 57.111 34.783 9.44 0.00 42.06 3.49
2977 3132 5.888691 TTGAATCGGCTAAAACATAGCAA 57.111 34.783 9.44 0.00 42.06 3.91
2978 3133 5.484173 TGAATCGGCTAAAACATAGCAAG 57.516 39.130 9.44 3.49 42.06 4.01
2979 3134 4.335315 TGAATCGGCTAAAACATAGCAAGG 59.665 41.667 9.44 0.00 42.06 3.61
2980 3135 3.343941 TCGGCTAAAACATAGCAAGGT 57.656 42.857 9.44 0.00 42.06 3.50
2981 3136 3.006940 TCGGCTAAAACATAGCAAGGTG 58.993 45.455 9.44 0.00 42.06 4.00
2982 3137 2.747446 CGGCTAAAACATAGCAAGGTGT 59.253 45.455 9.44 0.00 42.06 4.16
2983 3138 3.190535 CGGCTAAAACATAGCAAGGTGTT 59.809 43.478 9.44 0.00 42.06 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.017581 ATGGGGTGAGAGGGTGCC 61.018 66.667 0.00 0.00 0.00 5.01
6 7 2.592308 GATGGGGTGAGAGGGTGC 59.408 66.667 0.00 0.00 0.00 5.01
8 9 0.031010 GTAGGATGGGGTGAGAGGGT 60.031 60.000 0.00 0.00 0.00 4.34
118 131 0.182061 ATGAAGAGGCCACGCATGAT 59.818 50.000 5.01 0.00 0.00 2.45
126 139 2.044650 GGCTGCATGAAGAGGCCA 60.045 61.111 4.31 0.00 42.08 5.36
178 191 4.812476 CTTCATCACGGCGGGCGA 62.812 66.667 31.03 9.61 0.00 5.54
240 255 1.207089 CTTCGTGGATGTCTTGCCCTA 59.793 52.381 0.00 0.00 0.00 3.53
312 327 3.276091 CGTCACACGCCCTGCAAA 61.276 61.111 0.00 0.00 33.65 3.68
402 420 7.365563 GGAAATTTTCTACCTTTGGGGCATATT 60.366 37.037 8.93 0.00 39.10 1.28
509 530 4.799419 TGACATGTATGCATCATCGTTG 57.201 40.909 0.19 0.00 31.99 4.10
548 569 3.557577 TGAGACCAATGCGAATTGTTG 57.442 42.857 15.08 3.24 0.00 3.33
575 596 1.731709 TGGTCTTCGAAATGCATGTCG 59.268 47.619 29.61 29.61 38.62 4.35
617 638 2.100631 GTCGACAATGCCCTCACCG 61.101 63.158 11.55 0.00 0.00 4.94
758 779 5.551233 AGATCAAAGTGTTCTTTCATCCGA 58.449 37.500 0.00 0.00 40.43 4.55
789 810 1.079503 GAGCGGTCAATTCCACTGAC 58.920 55.000 10.30 0.00 42.08 3.51
791 812 1.361668 CGGAGCGGTCAATTCCACTG 61.362 60.000 17.59 0.00 0.00 3.66
845 866 1.205417 GCCCATTGTTGACAATCCCTG 59.795 52.381 6.39 0.00 44.10 4.45
1004 1027 9.371136 TGAACAAGTTTTGTGCAATATTTAACA 57.629 25.926 0.16 0.00 46.01 2.41
1076 1099 2.496871 CAATGAGGCAAGGTAAATGGCA 59.503 45.455 0.00 0.00 45.08 4.92
1186 1210 7.295340 TCCTCATCATCATCATCTTCCAAATT 58.705 34.615 0.00 0.00 0.00 1.82
1254 1281 4.084013 CGTTTTGGCTTCGAGTATGAAACT 60.084 41.667 11.38 0.00 42.80 2.66
1290 1317 6.747280 TCTTCTTTTCTTTTGCGTCTTTCTTG 59.253 34.615 0.00 0.00 0.00 3.02
1355 1382 5.521372 GCTTCTTTTCTTGTGCTGACAATTT 59.479 36.000 0.00 0.00 41.33 1.82
1364 1391 2.119457 CGTTGGCTTCTTTTCTTGTGC 58.881 47.619 0.00 0.00 0.00 4.57
1516 1543 5.509498 CTTCTCCCATCCCAACAATTTAGA 58.491 41.667 0.00 0.00 0.00 2.10
1529 1556 3.064900 AGAACAAGTGCTTCTCCCATC 57.935 47.619 0.00 0.00 0.00 3.51
1585 1612 3.009723 CACGGGCAAGATTGACATACTT 58.990 45.455 0.02 0.00 38.18 2.24
1947 2043 1.285078 TCCTCATCTTCCTCCGACTCA 59.715 52.381 0.00 0.00 0.00 3.41
2049 2170 3.642848 AGTTCAAATTCATGCCCACAAGT 59.357 39.130 0.00 0.00 0.00 3.16
2050 2174 4.261578 AGTTCAAATTCATGCCCACAAG 57.738 40.909 0.00 0.00 0.00 3.16
2315 2470 1.271102 GGTAAAATCTGGTTTGCGGCA 59.729 47.619 0.00 0.00 0.00 5.69
2376 2531 1.363744 CGAATGGAAGCACAGAGTCC 58.636 55.000 0.00 0.00 0.00 3.85
2377 2532 0.723981 GCGAATGGAAGCACAGAGTC 59.276 55.000 0.00 0.00 0.00 3.36
2378 2533 1.016130 CGCGAATGGAAGCACAGAGT 61.016 55.000 0.00 0.00 0.00 3.24
2379 2534 1.016130 ACGCGAATGGAAGCACAGAG 61.016 55.000 15.93 0.00 0.00 3.35
2380 2535 0.245266 TACGCGAATGGAAGCACAGA 59.755 50.000 15.93 0.00 0.00 3.41
2381 2536 1.075542 TTACGCGAATGGAAGCACAG 58.924 50.000 15.93 0.00 0.00 3.66
2382 2537 0.793861 GTTACGCGAATGGAAGCACA 59.206 50.000 15.93 0.00 0.00 4.57
2383 2538 1.076332 AGTTACGCGAATGGAAGCAC 58.924 50.000 15.93 0.00 0.00 4.40
2384 2539 1.075542 CAGTTACGCGAATGGAAGCA 58.924 50.000 15.93 0.00 0.00 3.91
2385 2540 0.373716 CCAGTTACGCGAATGGAAGC 59.626 55.000 15.93 0.00 34.60 3.86
2386 2541 1.006832 CCCAGTTACGCGAATGGAAG 58.993 55.000 15.93 0.00 34.60 3.46
2387 2542 0.322322 ACCCAGTTACGCGAATGGAA 59.678 50.000 15.93 0.00 34.60 3.53
2388 2543 1.135527 CTACCCAGTTACGCGAATGGA 59.864 52.381 15.93 0.00 34.60 3.41
2389 2544 1.567504 CTACCCAGTTACGCGAATGG 58.432 55.000 15.93 10.69 0.00 3.16
2390 2545 0.928229 GCTACCCAGTTACGCGAATG 59.072 55.000 15.93 0.00 0.00 2.67
2391 2546 0.533491 TGCTACCCAGTTACGCGAAT 59.467 50.000 15.93 0.00 0.00 3.34
2392 2547 0.317799 TTGCTACCCAGTTACGCGAA 59.682 50.000 15.93 0.00 0.00 4.70
2393 2548 0.317799 TTTGCTACCCAGTTACGCGA 59.682 50.000 15.93 0.00 0.00 5.87
2394 2549 1.149987 TTTTGCTACCCAGTTACGCG 58.850 50.000 3.53 3.53 0.00 6.01
2395 2550 2.809696 TCTTTTTGCTACCCAGTTACGC 59.190 45.455 0.00 0.00 0.00 4.42
2396 2551 5.622770 AATCTTTTTGCTACCCAGTTACG 57.377 39.130 0.00 0.00 0.00 3.18
2397 2552 7.916914 TCTAATCTTTTTGCTACCCAGTTAC 57.083 36.000 0.00 0.00 0.00 2.50
2398 2553 8.380099 TCTTCTAATCTTTTTGCTACCCAGTTA 58.620 33.333 0.00 0.00 0.00 2.24
2399 2554 7.231467 TCTTCTAATCTTTTTGCTACCCAGTT 58.769 34.615 0.00 0.00 0.00 3.16
2400 2555 6.779860 TCTTCTAATCTTTTTGCTACCCAGT 58.220 36.000 0.00 0.00 0.00 4.00
2401 2556 7.687941 TTCTTCTAATCTTTTTGCTACCCAG 57.312 36.000 0.00 0.00 0.00 4.45
2402 2557 8.472007 TTTTCTTCTAATCTTTTTGCTACCCA 57.528 30.769 0.00 0.00 0.00 4.51
2403 2558 9.358872 CATTTTCTTCTAATCTTTTTGCTACCC 57.641 33.333 0.00 0.00 0.00 3.69
2407 2562 9.082313 TCCTCATTTTCTTCTAATCTTTTTGCT 57.918 29.630 0.00 0.00 0.00 3.91
2408 2563 9.696917 TTCCTCATTTTCTTCTAATCTTTTTGC 57.303 29.630 0.00 0.00 0.00 3.68
2412 2567 9.866798 GCATTTCCTCATTTTCTTCTAATCTTT 57.133 29.630 0.00 0.00 0.00 2.52
2413 2568 8.186821 CGCATTTCCTCATTTTCTTCTAATCTT 58.813 33.333 0.00 0.00 0.00 2.40
2414 2569 7.337942 ACGCATTTCCTCATTTTCTTCTAATCT 59.662 33.333 0.00 0.00 0.00 2.40
2415 2570 7.475840 ACGCATTTCCTCATTTTCTTCTAATC 58.524 34.615 0.00 0.00 0.00 1.75
2416 2571 7.396540 ACGCATTTCCTCATTTTCTTCTAAT 57.603 32.000 0.00 0.00 0.00 1.73
2417 2572 6.817765 ACGCATTTCCTCATTTTCTTCTAA 57.182 33.333 0.00 0.00 0.00 2.10
2418 2573 7.915293 TTACGCATTTCCTCATTTTCTTCTA 57.085 32.000 0.00 0.00 0.00 2.10
2419 2574 6.817765 TTACGCATTTCCTCATTTTCTTCT 57.182 33.333 0.00 0.00 0.00 2.85
2420 2575 7.029563 ACATTACGCATTTCCTCATTTTCTTC 58.970 34.615 0.00 0.00 0.00 2.87
2421 2576 6.924111 ACATTACGCATTTCCTCATTTTCTT 58.076 32.000 0.00 0.00 0.00 2.52
2422 2577 6.515272 ACATTACGCATTTCCTCATTTTCT 57.485 33.333 0.00 0.00 0.00 2.52
2423 2578 7.581011 AAACATTACGCATTTCCTCATTTTC 57.419 32.000 0.00 0.00 0.00 2.29
2424 2579 7.961325 AAAACATTACGCATTTCCTCATTTT 57.039 28.000 0.00 0.00 0.00 1.82
2425 2580 7.961325 AAAAACATTACGCATTTCCTCATTT 57.039 28.000 0.00 0.00 0.00 2.32
2462 2617 7.180229 TCCCCTATTAGTGGTACATACATGATG 59.820 40.741 0.00 1.48 44.52 3.07
2463 2618 7.253421 TCCCCTATTAGTGGTACATACATGAT 58.747 38.462 0.00 0.00 44.52 2.45
2464 2619 6.626238 TCCCCTATTAGTGGTACATACATGA 58.374 40.000 0.00 0.00 44.52 3.07
2465 2620 6.928348 TCCCCTATTAGTGGTACATACATG 57.072 41.667 0.00 0.00 44.52 3.21
2466 2621 8.181524 TGTATCCCCTATTAGTGGTACATACAT 58.818 37.037 0.00 0.00 44.52 2.29
2467 2622 7.537513 TGTATCCCCTATTAGTGGTACATACA 58.462 38.462 0.00 2.90 44.52 2.29
2468 2623 8.426569 TTGTATCCCCTATTAGTGGTACATAC 57.573 38.462 0.00 0.00 44.52 2.39
2469 2624 9.449896 TTTTGTATCCCCTATTAGTGGTACATA 57.550 33.333 0.00 3.36 44.52 2.29
2470 2625 7.941053 TTTGTATCCCCTATTAGTGGTACAT 57.059 36.000 0.00 0.00 44.52 2.29
2471 2626 7.636413 GCTTTTGTATCCCCTATTAGTGGTACA 60.636 40.741 0.00 0.00 0.00 2.90
2472 2627 6.709397 GCTTTTGTATCCCCTATTAGTGGTAC 59.291 42.308 0.00 0.00 0.00 3.34
2473 2628 6.387513 TGCTTTTGTATCCCCTATTAGTGGTA 59.612 38.462 0.00 0.00 0.00 3.25
2474 2629 5.192923 TGCTTTTGTATCCCCTATTAGTGGT 59.807 40.000 0.00 0.00 0.00 4.16
2475 2630 5.690865 TGCTTTTGTATCCCCTATTAGTGG 58.309 41.667 0.00 0.00 0.00 4.00
2476 2631 6.591935 TCTGCTTTTGTATCCCCTATTAGTG 58.408 40.000 0.00 0.00 0.00 2.74
2477 2632 6.824958 TCTGCTTTTGTATCCCCTATTAGT 57.175 37.500 0.00 0.00 0.00 2.24
2478 2633 9.965902 AATATCTGCTTTTGTATCCCCTATTAG 57.034 33.333 0.00 0.00 0.00 1.73
2483 2638 9.660544 AATTAAATATCTGCTTTTGTATCCCCT 57.339 29.630 0.00 0.00 0.00 4.79
2484 2639 9.914131 GAATTAAATATCTGCTTTTGTATCCCC 57.086 33.333 0.00 0.00 0.00 4.81
2485 2640 9.612620 CGAATTAAATATCTGCTTTTGTATCCC 57.387 33.333 0.00 0.00 0.00 3.85
2486 2641 9.612620 CCGAATTAAATATCTGCTTTTGTATCC 57.387 33.333 0.00 0.00 0.00 2.59
2488 2643 9.950680 CACCGAATTAAATATCTGCTTTTGTAT 57.049 29.630 0.00 0.00 0.00 2.29
2489 2644 7.913297 GCACCGAATTAAATATCTGCTTTTGTA 59.087 33.333 0.00 0.00 0.00 2.41
2490 2645 6.751888 GCACCGAATTAAATATCTGCTTTTGT 59.248 34.615 0.00 0.00 0.00 2.83
2491 2646 6.198966 GGCACCGAATTAAATATCTGCTTTTG 59.801 38.462 0.00 0.00 0.00 2.44
2492 2647 6.273071 GGCACCGAATTAAATATCTGCTTTT 58.727 36.000 0.00 0.00 0.00 2.27
2493 2648 5.221244 GGGCACCGAATTAAATATCTGCTTT 60.221 40.000 0.00 0.00 40.86 3.51
2494 2649 4.278419 GGGCACCGAATTAAATATCTGCTT 59.722 41.667 0.00 0.00 40.86 3.91
2495 2650 3.821033 GGGCACCGAATTAAATATCTGCT 59.179 43.478 0.00 0.00 40.86 4.24
2496 2651 4.160736 GGGCACCGAATTAAATATCTGC 57.839 45.455 0.00 0.00 40.86 4.26
2512 2667 2.952310 GGATGAAGATAAACCTGGGCAC 59.048 50.000 0.00 0.00 0.00 5.01
2513 2668 2.421388 CGGATGAAGATAAACCTGGGCA 60.421 50.000 0.00 0.00 0.00 5.36
2514 2669 2.222027 CGGATGAAGATAAACCTGGGC 58.778 52.381 0.00 0.00 0.00 5.36
2515 2670 2.172717 ACCGGATGAAGATAAACCTGGG 59.827 50.000 9.46 0.00 0.00 4.45
2516 2671 3.118408 TCACCGGATGAAGATAAACCTGG 60.118 47.826 9.46 0.00 33.02 4.45
2517 2672 4.137116 TCACCGGATGAAGATAAACCTG 57.863 45.455 9.46 0.00 33.02 4.00
2518 2673 4.837093 TTCACCGGATGAAGATAAACCT 57.163 40.909 9.46 0.00 42.62 3.50
2580 2735 4.773674 ACTGGATCATCTTGCATCCAAAAA 59.226 37.500 5.98 0.00 46.46 1.94
2581 2736 4.346730 ACTGGATCATCTTGCATCCAAAA 58.653 39.130 5.98 0.00 46.46 2.44
2582 2737 3.972133 ACTGGATCATCTTGCATCCAAA 58.028 40.909 5.98 0.00 46.46 3.28
2583 2738 3.657398 ACTGGATCATCTTGCATCCAA 57.343 42.857 5.98 0.00 46.46 3.53
2584 2739 3.493176 CGTACTGGATCATCTTGCATCCA 60.493 47.826 4.47 4.47 45.32 3.41
2585 2740 3.062763 CGTACTGGATCATCTTGCATCC 58.937 50.000 0.00 0.00 39.38 3.51
2586 2741 2.478134 GCGTACTGGATCATCTTGCATC 59.522 50.000 0.00 0.00 0.00 3.91
2587 2742 2.487934 GCGTACTGGATCATCTTGCAT 58.512 47.619 0.00 0.00 0.00 3.96
2588 2743 1.473257 GGCGTACTGGATCATCTTGCA 60.473 52.381 0.00 0.00 0.00 4.08
2589 2744 1.221414 GGCGTACTGGATCATCTTGC 58.779 55.000 0.00 0.00 0.00 4.01
2590 2745 2.477825 CTGGCGTACTGGATCATCTTG 58.522 52.381 0.00 0.00 0.00 3.02
2591 2746 1.414181 CCTGGCGTACTGGATCATCTT 59.586 52.381 0.00 0.00 40.42 2.40
2592 2747 1.043816 CCTGGCGTACTGGATCATCT 58.956 55.000 0.00 0.00 40.42 2.90
2593 2748 0.034059 CCCTGGCGTACTGGATCATC 59.966 60.000 0.00 0.00 40.42 2.92
2594 2749 1.410850 CCCCTGGCGTACTGGATCAT 61.411 60.000 0.00 0.00 40.42 2.45
2595 2750 2.063979 CCCCTGGCGTACTGGATCA 61.064 63.158 0.00 0.00 40.42 2.92
2596 2751 2.029307 GACCCCTGGCGTACTGGATC 62.029 65.000 6.72 0.00 40.42 3.36
2597 2752 2.040606 ACCCCTGGCGTACTGGAT 59.959 61.111 6.72 0.00 40.42 3.41
2598 2753 2.682494 GACCCCTGGCGTACTGGA 60.682 66.667 6.72 0.00 40.42 3.86
2599 2754 2.683933 AGACCCCTGGCGTACTGG 60.684 66.667 0.00 0.00 37.89 4.00
2600 2755 0.968901 TACAGACCCCTGGCGTACTG 60.969 60.000 8.46 8.46 44.60 2.74
2601 2756 0.251922 TTACAGACCCCTGGCGTACT 60.252 55.000 0.00 0.00 44.60 2.73
2602 2757 0.609662 TTTACAGACCCCTGGCGTAC 59.390 55.000 0.00 0.00 44.60 3.67
2603 2758 1.350071 TTTTACAGACCCCTGGCGTA 58.650 50.000 0.00 0.00 44.60 4.42
2604 2759 0.696501 ATTTTACAGACCCCTGGCGT 59.303 50.000 0.00 0.00 44.60 5.68
2605 2760 1.834188 AATTTTACAGACCCCTGGCG 58.166 50.000 0.00 0.00 44.60 5.69
2606 2761 2.163613 CGAAATTTTACAGACCCCTGGC 59.836 50.000 0.00 0.00 44.60 4.85
2607 2762 3.190535 CACGAAATTTTACAGACCCCTGG 59.809 47.826 0.00 0.00 44.60 4.45
2608 2763 3.190535 CCACGAAATTTTACAGACCCCTG 59.809 47.826 0.00 0.00 45.76 4.45
2609 2764 3.418047 CCACGAAATTTTACAGACCCCT 58.582 45.455 0.00 0.00 0.00 4.79
2610 2765 2.094906 GCCACGAAATTTTACAGACCCC 60.095 50.000 0.00 0.00 0.00 4.95
2611 2766 2.817844 AGCCACGAAATTTTACAGACCC 59.182 45.455 0.00 0.00 0.00 4.46
2612 2767 5.616488 TTAGCCACGAAATTTTACAGACC 57.384 39.130 0.00 0.00 0.00 3.85
2613 2768 6.526674 CCAATTAGCCACGAAATTTTACAGAC 59.473 38.462 0.00 0.00 0.00 3.51
2614 2769 6.616947 CCAATTAGCCACGAAATTTTACAGA 58.383 36.000 0.00 0.00 0.00 3.41
2615 2770 5.288472 GCCAATTAGCCACGAAATTTTACAG 59.712 40.000 0.00 0.00 0.00 2.74
2616 2771 5.164954 GCCAATTAGCCACGAAATTTTACA 58.835 37.500 0.00 0.00 0.00 2.41
2617 2772 5.164954 TGCCAATTAGCCACGAAATTTTAC 58.835 37.500 0.00 0.00 0.00 2.01
2618 2773 5.392767 TGCCAATTAGCCACGAAATTTTA 57.607 34.783 0.00 0.00 0.00 1.52
2619 2774 4.264460 TGCCAATTAGCCACGAAATTTT 57.736 36.364 0.00 0.00 0.00 1.82
2620 2775 3.951775 TGCCAATTAGCCACGAAATTT 57.048 38.095 0.00 0.00 0.00 1.82
2621 2776 4.470334 AATGCCAATTAGCCACGAAATT 57.530 36.364 0.00 0.00 0.00 1.82
2622 2777 4.081752 TCAAATGCCAATTAGCCACGAAAT 60.082 37.500 0.00 0.00 0.00 2.17
2623 2778 3.256879 TCAAATGCCAATTAGCCACGAAA 59.743 39.130 0.00 0.00 0.00 3.46
2624 2779 2.822561 TCAAATGCCAATTAGCCACGAA 59.177 40.909 0.00 0.00 0.00 3.85
2625 2780 2.423185 CTCAAATGCCAATTAGCCACGA 59.577 45.455 0.00 0.00 0.00 4.35
2626 2781 2.480073 CCTCAAATGCCAATTAGCCACG 60.480 50.000 0.00 0.00 0.00 4.94
2627 2782 2.760092 TCCTCAAATGCCAATTAGCCAC 59.240 45.455 0.00 0.00 0.00 5.01
2628 2783 3.025978 CTCCTCAAATGCCAATTAGCCA 58.974 45.455 0.00 0.00 0.00 4.75
2629 2784 2.223900 GCTCCTCAAATGCCAATTAGCC 60.224 50.000 0.00 0.00 0.00 3.93
2630 2785 2.692041 AGCTCCTCAAATGCCAATTAGC 59.308 45.455 0.00 0.00 0.00 3.09
2631 2786 3.003068 CGAGCTCCTCAAATGCCAATTAG 59.997 47.826 8.47 0.00 0.00 1.73
2632 2787 2.945008 CGAGCTCCTCAAATGCCAATTA 59.055 45.455 8.47 0.00 0.00 1.40
2633 2788 1.747355 CGAGCTCCTCAAATGCCAATT 59.253 47.619 8.47 0.00 0.00 2.32
2634 2789 1.340405 ACGAGCTCCTCAAATGCCAAT 60.340 47.619 8.47 0.00 0.00 3.16
2635 2790 0.036732 ACGAGCTCCTCAAATGCCAA 59.963 50.000 8.47 0.00 0.00 4.52
2636 2791 0.674581 CACGAGCTCCTCAAATGCCA 60.675 55.000 8.47 0.00 0.00 4.92
2637 2792 1.372087 CCACGAGCTCCTCAAATGCC 61.372 60.000 8.47 0.00 0.00 4.40
2638 2793 1.986575 GCCACGAGCTCCTCAAATGC 61.987 60.000 8.47 0.00 38.99 3.56
2639 2794 0.674581 TGCCACGAGCTCCTCAAATG 60.675 55.000 8.47 0.00 44.23 2.32
2640 2795 0.036732 TTGCCACGAGCTCCTCAAAT 59.963 50.000 8.47 0.00 44.23 2.32
2641 2796 0.179032 TTTGCCACGAGCTCCTCAAA 60.179 50.000 8.47 10.14 44.23 2.69
2642 2797 0.179032 TTTTGCCACGAGCTCCTCAA 60.179 50.000 8.47 4.45 44.23 3.02
2643 2798 0.179032 TTTTTGCCACGAGCTCCTCA 60.179 50.000 8.47 0.00 44.23 3.86
2644 2799 2.629002 TTTTTGCCACGAGCTCCTC 58.371 52.632 8.47 0.00 44.23 3.71
2645 2800 4.898607 TTTTTGCCACGAGCTCCT 57.101 50.000 8.47 0.00 44.23 3.69
2661 2816 9.705290 ACAGTGTTTGAAACTTATTTTGTCTTT 57.295 25.926 9.69 0.00 0.00 2.52
2662 2817 9.705290 AACAGTGTTTGAAACTTATTTTGTCTT 57.295 25.926 9.69 0.00 0.00 3.01
2663 2818 9.139174 CAACAGTGTTTGAAACTTATTTTGTCT 57.861 29.630 5.57 0.00 0.00 3.41
2664 2819 8.921670 ACAACAGTGTTTGAAACTTATTTTGTC 58.078 29.630 5.57 0.00 32.58 3.18
2665 2820 8.825667 ACAACAGTGTTTGAAACTTATTTTGT 57.174 26.923 5.57 9.05 32.58 2.83
2681 2836 6.859420 AAAAGCTTTTGAAAACAACAGTGT 57.141 29.167 23.30 0.00 40.75 3.55
2682 2837 7.791949 TGTAAAAGCTTTTGAAAACAACAGTG 58.208 30.769 30.21 0.00 0.00 3.66
2683 2838 7.117667 CCTGTAAAAGCTTTTGAAAACAACAGT 59.882 33.333 29.20 10.60 30.58 3.55
2684 2839 7.455447 CCTGTAAAAGCTTTTGAAAACAACAG 58.545 34.615 30.21 28.33 31.55 3.16
2685 2840 6.128418 GCCTGTAAAAGCTTTTGAAAACAACA 60.128 34.615 30.21 22.60 0.00 3.33
2686 2841 6.092122 AGCCTGTAAAAGCTTTTGAAAACAAC 59.908 34.615 30.21 19.71 35.22 3.32
2687 2842 6.169800 AGCCTGTAAAAGCTTTTGAAAACAA 58.830 32.000 30.21 9.23 35.22 2.83
2688 2843 5.729510 AGCCTGTAAAAGCTTTTGAAAACA 58.270 33.333 30.21 24.12 35.22 2.83
2689 2844 5.051708 CGAGCCTGTAAAAGCTTTTGAAAAC 60.052 40.000 30.21 21.29 40.11 2.43
2690 2845 5.040635 CGAGCCTGTAAAAGCTTTTGAAAA 58.959 37.500 30.21 11.02 40.11 2.29
2691 2846 4.336993 TCGAGCCTGTAAAAGCTTTTGAAA 59.663 37.500 30.21 16.15 40.11 2.69
2692 2847 3.880490 TCGAGCCTGTAAAAGCTTTTGAA 59.120 39.130 30.21 18.33 40.11 2.69
2693 2848 3.472652 TCGAGCCTGTAAAAGCTTTTGA 58.527 40.909 30.21 17.31 40.11 2.69
2694 2849 3.896648 TCGAGCCTGTAAAAGCTTTTG 57.103 42.857 30.21 16.69 40.11 2.44
2695 2850 4.911514 TTTCGAGCCTGTAAAAGCTTTT 57.088 36.364 26.50 26.50 40.11 2.27
2696 2851 5.453567 AATTTCGAGCCTGTAAAAGCTTT 57.546 34.783 5.69 5.69 40.11 3.51
2697 2852 5.453567 AAATTTCGAGCCTGTAAAAGCTT 57.546 34.783 0.00 0.00 40.11 3.74
2698 2853 6.374333 TGATAAATTTCGAGCCTGTAAAAGCT 59.626 34.615 0.00 0.00 43.55 3.74
2699 2854 6.551736 TGATAAATTTCGAGCCTGTAAAAGC 58.448 36.000 0.00 0.00 0.00 3.51
2700 2855 9.573133 AAATGATAAATTTCGAGCCTGTAAAAG 57.427 29.630 0.00 0.00 0.00 2.27
2701 2856 9.921637 AAAATGATAAATTTCGAGCCTGTAAAA 57.078 25.926 0.00 0.00 0.00 1.52
2702 2857 9.921637 AAAAATGATAAATTTCGAGCCTGTAAA 57.078 25.926 0.00 0.00 0.00 2.01
2741 2896 9.476202 GGCTAATTTTGTGAAGTTTAGACATTT 57.524 29.630 0.00 0.00 0.00 2.32
2742 2897 8.637986 TGGCTAATTTTGTGAAGTTTAGACATT 58.362 29.630 0.00 0.00 0.00 2.71
2743 2898 8.082242 GTGGCTAATTTTGTGAAGTTTAGACAT 58.918 33.333 0.36 0.00 0.00 3.06
2744 2899 7.422399 GTGGCTAATTTTGTGAAGTTTAGACA 58.578 34.615 0.00 0.00 0.00 3.41
2745 2900 6.577427 CGTGGCTAATTTTGTGAAGTTTAGAC 59.423 38.462 0.00 0.00 0.00 2.59
2746 2901 6.293735 CCGTGGCTAATTTTGTGAAGTTTAGA 60.294 38.462 0.00 0.00 0.00 2.10
2747 2902 5.856455 CCGTGGCTAATTTTGTGAAGTTTAG 59.144 40.000 0.00 0.00 0.00 1.85
2748 2903 5.531659 TCCGTGGCTAATTTTGTGAAGTTTA 59.468 36.000 0.00 0.00 0.00 2.01
2749 2904 4.339814 TCCGTGGCTAATTTTGTGAAGTTT 59.660 37.500 0.00 0.00 0.00 2.66
2750 2905 3.886505 TCCGTGGCTAATTTTGTGAAGTT 59.113 39.130 0.00 0.00 0.00 2.66
2751 2906 3.482436 TCCGTGGCTAATTTTGTGAAGT 58.518 40.909 0.00 0.00 0.00 3.01
2752 2907 4.701956 ATCCGTGGCTAATTTTGTGAAG 57.298 40.909 0.00 0.00 0.00 3.02
2753 2908 5.010112 TGAAATCCGTGGCTAATTTTGTGAA 59.990 36.000 0.00 0.00 0.00 3.18
2754 2909 4.520874 TGAAATCCGTGGCTAATTTTGTGA 59.479 37.500 0.00 0.00 0.00 3.58
2755 2910 4.804108 TGAAATCCGTGGCTAATTTTGTG 58.196 39.130 0.00 0.00 0.00 3.33
2756 2911 5.410067 CATGAAATCCGTGGCTAATTTTGT 58.590 37.500 0.00 0.00 0.00 2.83
2757 2912 4.268405 GCATGAAATCCGTGGCTAATTTTG 59.732 41.667 0.00 0.00 32.41 2.44
2758 2913 4.081752 TGCATGAAATCCGTGGCTAATTTT 60.082 37.500 0.00 0.00 32.41 1.82
2759 2914 3.446873 TGCATGAAATCCGTGGCTAATTT 59.553 39.130 0.00 0.00 32.41 1.82
2760 2915 3.023119 TGCATGAAATCCGTGGCTAATT 58.977 40.909 0.00 0.00 32.41 1.40
2761 2916 2.358898 GTGCATGAAATCCGTGGCTAAT 59.641 45.455 0.00 0.00 32.41 1.73
2762 2917 1.742831 GTGCATGAAATCCGTGGCTAA 59.257 47.619 0.00 0.00 32.41 3.09
2763 2918 1.339535 TGTGCATGAAATCCGTGGCTA 60.340 47.619 0.00 0.00 32.41 3.93
2764 2919 0.608856 TGTGCATGAAATCCGTGGCT 60.609 50.000 0.00 0.00 32.41 4.75
2765 2920 0.457035 ATGTGCATGAAATCCGTGGC 59.543 50.000 0.00 0.00 32.41 5.01
2766 2921 2.945447 AATGTGCATGAAATCCGTGG 57.055 45.000 0.00 0.00 32.41 4.94
2767 2922 3.365832 GCTAATGTGCATGAAATCCGTG 58.634 45.455 0.00 0.00 34.90 4.94
2768 2923 2.032054 CGCTAATGTGCATGAAATCCGT 59.968 45.455 0.00 0.00 0.00 4.69
2769 2924 2.032054 ACGCTAATGTGCATGAAATCCG 59.968 45.455 0.00 0.00 0.00 4.18
2770 2925 3.313526 AGACGCTAATGTGCATGAAATCC 59.686 43.478 0.00 0.00 0.00 3.01
2771 2926 4.521943 GAGACGCTAATGTGCATGAAATC 58.478 43.478 0.00 0.00 0.00 2.17
2772 2927 3.001634 CGAGACGCTAATGTGCATGAAAT 59.998 43.478 0.00 0.00 0.00 2.17
2773 2928 2.348362 CGAGACGCTAATGTGCATGAAA 59.652 45.455 0.00 0.00 0.00 2.69
2774 2929 1.926510 CGAGACGCTAATGTGCATGAA 59.073 47.619 0.00 0.00 0.00 2.57
2775 2930 1.559831 CGAGACGCTAATGTGCATGA 58.440 50.000 0.00 0.00 0.00 3.07
2788 2943 8.547091 AAATGATATTTTTGTTATGCGAGACG 57.453 30.769 0.00 0.00 0.00 4.18
2828 2983 9.303116 ACCCACATGTAACAGTAAAATCATTAA 57.697 29.630 0.00 0.00 0.00 1.40
2829 2984 8.735315 CACCCACATGTAACAGTAAAATCATTA 58.265 33.333 0.00 0.00 0.00 1.90
2830 2985 7.601856 CACCCACATGTAACAGTAAAATCATT 58.398 34.615 0.00 0.00 0.00 2.57
2831 2986 6.350110 GCACCCACATGTAACAGTAAAATCAT 60.350 38.462 0.00 0.00 0.00 2.45
2832 2987 5.048364 GCACCCACATGTAACAGTAAAATCA 60.048 40.000 0.00 0.00 0.00 2.57
2833 2988 5.048364 TGCACCCACATGTAACAGTAAAATC 60.048 40.000 0.00 0.00 0.00 2.17
2834 2989 4.830046 TGCACCCACATGTAACAGTAAAAT 59.170 37.500 0.00 0.00 0.00 1.82
2835 2990 4.207955 TGCACCCACATGTAACAGTAAAA 58.792 39.130 0.00 0.00 0.00 1.52
2836 2991 3.818210 CTGCACCCACATGTAACAGTAAA 59.182 43.478 0.00 0.00 0.00 2.01
2837 2992 3.071747 TCTGCACCCACATGTAACAGTAA 59.928 43.478 0.00 0.00 0.00 2.24
2838 2993 2.635427 TCTGCACCCACATGTAACAGTA 59.365 45.455 0.00 0.00 0.00 2.74
2839 2994 1.419762 TCTGCACCCACATGTAACAGT 59.580 47.619 0.00 0.00 0.00 3.55
2840 2995 2.183478 TCTGCACCCACATGTAACAG 57.817 50.000 0.00 2.33 0.00 3.16
2841 2996 2.435422 CATCTGCACCCACATGTAACA 58.565 47.619 0.00 0.00 0.00 2.41
2842 2997 1.133025 GCATCTGCACCCACATGTAAC 59.867 52.381 0.00 0.00 41.59 2.50
2843 2998 1.462616 GCATCTGCACCCACATGTAA 58.537 50.000 0.00 0.00 41.59 2.41
2844 2999 3.173540 GCATCTGCACCCACATGTA 57.826 52.632 0.00 0.00 41.59 2.29
2845 3000 4.007457 GCATCTGCACCCACATGT 57.993 55.556 0.00 0.00 41.59 3.21
2855 3010 2.486966 GGCTTTCGGTGCATCTGC 59.513 61.111 0.00 0.00 42.50 4.26
2856 3011 1.298157 TTCGGCTTTCGGTGCATCTG 61.298 55.000 0.00 0.00 39.77 2.90
2857 3012 0.605319 TTTCGGCTTTCGGTGCATCT 60.605 50.000 0.00 0.00 39.77 2.90
2858 3013 0.454452 GTTTCGGCTTTCGGTGCATC 60.454 55.000 0.00 0.00 39.77 3.91
2859 3014 1.579429 GTTTCGGCTTTCGGTGCAT 59.421 52.632 0.00 0.00 39.77 3.96
2860 3015 2.887889 CGTTTCGGCTTTCGGTGCA 61.888 57.895 0.00 0.00 39.77 4.57
2861 3016 2.127383 CGTTTCGGCTTTCGGTGC 60.127 61.111 0.00 0.00 39.77 5.01
2862 3017 2.127383 GCGTTTCGGCTTTCGGTG 60.127 61.111 0.00 0.00 39.77 4.94
2863 3018 2.280592 AGCGTTTCGGCTTTCGGT 60.281 55.556 0.00 0.00 41.39 4.69
2864 3019 2.173382 CAGCGTTTCGGCTTTCGG 59.827 61.111 0.00 0.00 42.53 4.30
2865 3020 2.499732 GCAGCGTTTCGGCTTTCG 60.500 61.111 0.00 0.00 42.53 3.46
2866 3021 2.946762 AGCAGCGTTTCGGCTTTC 59.053 55.556 0.00 0.00 43.76 2.62
2870 3025 0.998727 CTTTGAAGCAGCGTTTCGGC 60.999 55.000 0.00 0.00 36.06 5.54
2871 3026 0.307760 ACTTTGAAGCAGCGTTTCGG 59.692 50.000 0.00 0.00 0.00 4.30
2872 3027 2.941891 TACTTTGAAGCAGCGTTTCG 57.058 45.000 0.00 0.00 0.00 3.46
2873 3028 4.441087 CCTTTTACTTTGAAGCAGCGTTTC 59.559 41.667 0.00 0.00 0.00 2.78
2874 3029 4.097286 TCCTTTTACTTTGAAGCAGCGTTT 59.903 37.500 0.00 0.00 0.00 3.60
2875 3030 3.630312 TCCTTTTACTTTGAAGCAGCGTT 59.370 39.130 0.00 0.00 0.00 4.84
2876 3031 3.003378 GTCCTTTTACTTTGAAGCAGCGT 59.997 43.478 0.00 0.00 0.00 5.07
2877 3032 3.003275 TGTCCTTTTACTTTGAAGCAGCG 59.997 43.478 0.00 0.00 0.00 5.18
2878 3033 4.568152 TGTCCTTTTACTTTGAAGCAGC 57.432 40.909 0.00 0.00 0.00 5.25
2879 3034 9.696917 ATTATTTGTCCTTTTACTTTGAAGCAG 57.303 29.630 0.00 0.00 0.00 4.24
2880 3035 9.474920 CATTATTTGTCCTTTTACTTTGAAGCA 57.525 29.630 0.00 0.00 0.00 3.91
2881 3036 9.476202 ACATTATTTGTCCTTTTACTTTGAAGC 57.524 29.630 0.00 0.00 30.89 3.86
2897 3052 9.811995 TGAGCTACTATTAACGACATTATTTGT 57.188 29.630 0.00 0.00 42.79 2.83
2900 3055 9.900710 CTCTGAGCTACTATTAACGACATTATT 57.099 33.333 0.00 0.00 0.00 1.40
2901 3056 8.024285 GCTCTGAGCTACTATTAACGACATTAT 58.976 37.037 21.93 0.00 38.45 1.28
2902 3057 7.361127 GCTCTGAGCTACTATTAACGACATTA 58.639 38.462 21.93 0.00 38.45 1.90
2903 3058 6.210078 GCTCTGAGCTACTATTAACGACATT 58.790 40.000 21.93 0.00 38.45 2.71
2904 3059 5.278561 GGCTCTGAGCTACTATTAACGACAT 60.279 44.000 27.09 0.00 41.99 3.06
2905 3060 4.036498 GGCTCTGAGCTACTATTAACGACA 59.964 45.833 27.09 0.00 41.99 4.35
2906 3061 4.276431 AGGCTCTGAGCTACTATTAACGAC 59.724 45.833 27.09 7.50 41.99 4.34
2907 3062 4.462133 AGGCTCTGAGCTACTATTAACGA 58.538 43.478 27.09 0.00 41.99 3.85
2908 3063 4.276183 TGAGGCTCTGAGCTACTATTAACG 59.724 45.833 27.09 0.00 41.99 3.18
2909 3064 5.533154 TCTGAGGCTCTGAGCTACTATTAAC 59.467 44.000 27.09 8.87 41.99 2.01
2910 3065 5.696030 TCTGAGGCTCTGAGCTACTATTAA 58.304 41.667 27.09 5.25 41.99 1.40
2911 3066 5.311844 TCTGAGGCTCTGAGCTACTATTA 57.688 43.478 27.09 6.59 41.99 0.98
2912 3067 4.177537 TCTGAGGCTCTGAGCTACTATT 57.822 45.455 27.09 8.05 41.99 1.73
2913 3068 3.874383 TCTGAGGCTCTGAGCTACTAT 57.126 47.619 27.09 10.00 41.99 2.12
2914 3069 3.653835 TTCTGAGGCTCTGAGCTACTA 57.346 47.619 27.09 11.74 41.99 1.82
2915 3070 2.523325 TTCTGAGGCTCTGAGCTACT 57.477 50.000 27.09 17.51 41.99 2.57
2916 3071 3.888930 AGTATTCTGAGGCTCTGAGCTAC 59.111 47.826 27.09 22.60 41.99 3.58
2917 3072 3.888323 CAGTATTCTGAGGCTCTGAGCTA 59.112 47.826 27.09 14.90 43.76 3.32
2918 3073 2.694628 CAGTATTCTGAGGCTCTGAGCT 59.305 50.000 27.09 17.34 43.76 4.09
2919 3074 2.430332 ACAGTATTCTGAGGCTCTGAGC 59.570 50.000 21.17 21.17 43.76 4.26
2920 3075 4.681744 GAACAGTATTCTGAGGCTCTGAG 58.318 47.826 21.08 13.27 43.76 3.35
2921 3076 3.129462 CGAACAGTATTCTGAGGCTCTGA 59.871 47.826 18.78 18.78 43.76 3.27
2922 3077 3.443037 CGAACAGTATTCTGAGGCTCTG 58.557 50.000 16.72 15.59 43.76 3.35
2923 3078 2.159170 GCGAACAGTATTCTGAGGCTCT 60.159 50.000 16.72 0.00 43.76 4.09
2924 3079 2.197577 GCGAACAGTATTCTGAGGCTC 58.802 52.381 7.79 7.79 43.76 4.70
2925 3080 1.469940 CGCGAACAGTATTCTGAGGCT 60.470 52.381 0.00 0.00 43.76 4.58
2926 3081 0.924090 CGCGAACAGTATTCTGAGGC 59.076 55.000 0.00 5.38 43.76 4.70
2927 3082 0.924090 GCGCGAACAGTATTCTGAGG 59.076 55.000 12.10 0.00 43.76 3.86
2928 3083 1.585668 CTGCGCGAACAGTATTCTGAG 59.414 52.381 12.10 0.00 43.76 3.35
2929 3084 1.629013 CTGCGCGAACAGTATTCTGA 58.371 50.000 12.10 0.00 43.76 3.27
2930 3085 0.025513 GCTGCGCGAACAGTATTCTG 59.974 55.000 12.10 0.00 46.18 3.02
2931 3086 0.389817 TGCTGCGCGAACAGTATTCT 60.390 50.000 12.10 0.00 39.96 2.40
2932 3087 0.442310 TTGCTGCGCGAACAGTATTC 59.558 50.000 12.10 0.00 39.96 1.75
2933 3088 0.871722 TTTGCTGCGCGAACAGTATT 59.128 45.000 12.10 0.00 39.96 1.89
2934 3089 0.871722 TTTTGCTGCGCGAACAGTAT 59.128 45.000 12.10 0.00 39.96 2.12
2935 3090 0.871722 ATTTTGCTGCGCGAACAGTA 59.128 45.000 12.10 5.16 39.96 2.74
2936 3091 0.030638 AATTTTGCTGCGCGAACAGT 59.969 45.000 12.10 0.00 39.96 3.55
2937 3092 1.130955 AAATTTTGCTGCGCGAACAG 58.869 45.000 12.10 10.24 40.80 3.16
2938 3093 0.851495 CAAATTTTGCTGCGCGAACA 59.149 45.000 12.10 0.00 30.99 3.18
2939 3094 1.127701 TCAAATTTTGCTGCGCGAAC 58.872 45.000 12.10 0.00 30.99 3.95
2940 3095 1.845266 TTCAAATTTTGCTGCGCGAA 58.155 40.000 12.10 0.00 0.00 4.70
2941 3096 1.984990 GATTCAAATTTTGCTGCGCGA 59.015 42.857 12.10 0.00 0.00 5.87
2942 3097 1.266019 CGATTCAAATTTTGCTGCGCG 60.266 47.619 0.00 0.00 0.00 6.86
2943 3098 1.059549 CCGATTCAAATTTTGCTGCGC 59.940 47.619 0.00 0.00 0.00 6.09
2944 3099 1.059549 GCCGATTCAAATTTTGCTGCG 59.940 47.619 4.19 7.17 0.00 5.18
2945 3100 2.340337 AGCCGATTCAAATTTTGCTGC 58.660 42.857 4.19 0.00 0.00 5.25
2946 3101 6.073873 TGTTTTAGCCGATTCAAATTTTGCTG 60.074 34.615 4.19 0.00 0.00 4.41
2947 3102 5.988561 TGTTTTAGCCGATTCAAATTTTGCT 59.011 32.000 4.19 0.04 0.00 3.91
2948 3103 6.221858 TGTTTTAGCCGATTCAAATTTTGC 57.778 33.333 4.19 0.00 0.00 3.68
2949 3104 8.110002 GCTATGTTTTAGCCGATTCAAATTTTG 58.890 33.333 2.59 2.59 34.65 2.44
2950 3105 7.816995 TGCTATGTTTTAGCCGATTCAAATTTT 59.183 29.630 2.42 0.00 39.69 1.82
2951 3106 7.319646 TGCTATGTTTTAGCCGATTCAAATTT 58.680 30.769 2.42 0.00 39.69 1.82
2952 3107 6.862209 TGCTATGTTTTAGCCGATTCAAATT 58.138 32.000 2.42 0.00 39.69 1.82
2953 3108 6.449635 TGCTATGTTTTAGCCGATTCAAAT 57.550 33.333 2.42 0.00 39.69 2.32
2954 3109 5.888691 TGCTATGTTTTAGCCGATTCAAA 57.111 34.783 2.42 0.00 39.69 2.69
2955 3110 5.163663 CCTTGCTATGTTTTAGCCGATTCAA 60.164 40.000 2.42 0.00 39.69 2.69
2956 3111 4.335315 CCTTGCTATGTTTTAGCCGATTCA 59.665 41.667 2.42 0.00 39.69 2.57
2957 3112 4.335594 ACCTTGCTATGTTTTAGCCGATTC 59.664 41.667 2.42 0.00 39.69 2.52
2958 3113 4.096382 CACCTTGCTATGTTTTAGCCGATT 59.904 41.667 2.42 0.00 39.69 3.34
2959 3114 3.627577 CACCTTGCTATGTTTTAGCCGAT 59.372 43.478 2.42 0.00 39.69 4.18
2960 3115 3.006940 CACCTTGCTATGTTTTAGCCGA 58.993 45.455 2.42 0.00 39.69 5.54
2961 3116 2.747446 ACACCTTGCTATGTTTTAGCCG 59.253 45.455 2.42 0.00 39.69 5.52
2962 3117 4.783764 AACACCTTGCTATGTTTTAGCC 57.216 40.909 2.42 0.00 39.69 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.