Multiple sequence alignment - TraesCS4B01G130100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G130100 chr4B 100.000 4387 0 0 1 4387 170926034 170930420 0.000000e+00 8102.0
1 TraesCS4B01G130100 chr4B 93.333 135 9 0 1 135 145524211 145524345 2.680000e-47 200.0
2 TraesCS4B01G130100 chr4D 89.918 3432 143 72 756 4074 109469351 109472692 0.000000e+00 4233.0
3 TraesCS4B01G130100 chr4D 84.599 461 31 23 144 576 109468373 109468821 5.250000e-114 422.0
4 TraesCS4B01G130100 chr4D 86.989 269 26 4 4120 4387 109472698 109472958 1.190000e-75 294.0
5 TraesCS4B01G130100 chr4A 93.404 2532 88 31 773 3275 466941825 466939344 0.000000e+00 3677.0
6 TraesCS4B01G130100 chr4A 81.944 360 36 18 3771 4111 466938644 466938295 1.200000e-70 278.0
7 TraesCS4B01G130100 chr4A 92.593 135 8 2 1 134 675808083 675808216 4.480000e-45 193.0
8 TraesCS4B01G130100 chr4A 92.742 124 8 1 3281 3404 466939172 466939050 1.250000e-40 178.0
9 TraesCS4B01G130100 chr4A 85.616 146 3 5 172 317 466942263 466942136 2.130000e-28 137.0
10 TraesCS4B01G130100 chr7B 82.316 803 116 19 1001 1796 109702396 109703179 0.000000e+00 673.0
11 TraesCS4B01G130100 chr7A 82.294 802 118 17 1001 1796 148415106 148415889 0.000000e+00 673.0
12 TraesCS4B01G130100 chr7A 81.132 318 48 7 1292 1606 681014635 681014327 1.220000e-60 244.0
13 TraesCS4B01G130100 chr7D 82.192 803 117 19 1001 1796 146862920 146863703 0.000000e+00 667.0
14 TraesCS4B01G130100 chr7D 92.029 138 11 0 1 138 114779762 114779625 1.240000e-45 195.0
15 TraesCS4B01G130100 chr6B 81.563 819 121 21 1001 1810 593711934 593712731 0.000000e+00 649.0
16 TraesCS4B01G130100 chr6B 100.000 32 0 0 3248 3279 423096414 423096445 4.740000e-05 60.2
17 TraesCS4B01G130100 chr6A 81.563 819 121 21 1001 1810 543394805 543395602 0.000000e+00 649.0
18 TraesCS4B01G130100 chr6A 100.000 32 0 0 3248 3279 26325351 26325320 4.740000e-05 60.2
19 TraesCS4B01G130100 chr6D 81.319 819 123 22 1001 1810 397082345 397083142 4.790000e-179 638.0
20 TraesCS4B01G130100 chr6D 91.304 138 12 0 1 138 376073539 376073402 5.790000e-44 189.0
21 TraesCS4B01G130100 chr3D 80.776 541 91 11 1016 1551 302850164 302849632 1.140000e-110 411.0
22 TraesCS4B01G130100 chr3D 92.537 134 10 0 1 134 300684929 300684796 4.480000e-45 193.0
23 TraesCS4B01G130100 chr5B 93.333 135 9 0 1 135 56722738 56722872 2.680000e-47 200.0
24 TraesCS4B01G130100 chr1D 92.593 135 10 0 1 135 175812278 175812412 1.240000e-45 195.0
25 TraesCS4B01G130100 chr1D 100.000 32 0 0 3248 3279 310161159 310161128 4.740000e-05 60.2
26 TraesCS4B01G130100 chr2D 92.537 134 10 0 1 134 592132980 592133113 4.480000e-45 193.0
27 TraesCS4B01G130100 chr2D 92.537 134 10 0 1 134 608789797 608789930 4.480000e-45 193.0
28 TraesCS4B01G130100 chr3A 100.000 32 0 0 3248 3279 411267369 411267338 4.740000e-05 60.2
29 TraesCS4B01G130100 chr3A 100.000 29 0 0 3659 3687 475702788 475702760 2.000000e-03 54.7
30 TraesCS4B01G130100 chr1A 100.000 32 0 0 3248 3279 508959173 508959142 4.740000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G130100 chr4B 170926034 170930420 4386 False 8102.000000 8102 100.000000 1 4387 1 chr4B.!!$F2 4386
1 TraesCS4B01G130100 chr4D 109468373 109472958 4585 False 1649.666667 4233 87.168667 144 4387 3 chr4D.!!$F1 4243
2 TraesCS4B01G130100 chr4A 466938295 466942263 3968 True 1067.500000 3677 88.426500 172 4111 4 chr4A.!!$R1 3939
3 TraesCS4B01G130100 chr7B 109702396 109703179 783 False 673.000000 673 82.316000 1001 1796 1 chr7B.!!$F1 795
4 TraesCS4B01G130100 chr7A 148415106 148415889 783 False 673.000000 673 82.294000 1001 1796 1 chr7A.!!$F1 795
5 TraesCS4B01G130100 chr7D 146862920 146863703 783 False 667.000000 667 82.192000 1001 1796 1 chr7D.!!$F1 795
6 TraesCS4B01G130100 chr6B 593711934 593712731 797 False 649.000000 649 81.563000 1001 1810 1 chr6B.!!$F2 809
7 TraesCS4B01G130100 chr6A 543394805 543395602 797 False 649.000000 649 81.563000 1001 1810 1 chr6A.!!$F1 809
8 TraesCS4B01G130100 chr6D 397082345 397083142 797 False 638.000000 638 81.319000 1001 1810 1 chr6D.!!$F1 809
9 TraesCS4B01G130100 chr3D 302849632 302850164 532 True 411.000000 411 80.776000 1016 1551 1 chr3D.!!$R2 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.033504 AATGGACGACAACAGACGCT 59.966 50.0 0.00 0.00 0.00 5.07 F
64 65 0.107945 ACTGCTCCGAGAATGAAGCC 60.108 55.0 0.00 0.00 0.00 4.35 F
65 66 0.177604 CTGCTCCGAGAATGAAGCCT 59.822 55.0 0.00 0.00 0.00 4.58 F
912 1380 0.300491 CACAGACAAACACACCGTCG 59.700 55.0 0.00 0.00 34.80 5.12 F
2614 3109 0.033090 TGTGCACAGCTCTGACTCTG 59.967 55.0 17.42 1.84 36.45 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1704 2175 2.283529 GCCGGAGAGGTTGGAGACA 61.284 63.158 5.05 0.00 43.70 3.41 R
2050 2531 7.792508 CGAAAACAAACAAACTGCTAGTAGTAG 59.207 37.037 14.28 13.18 33.91 2.57 R
2398 2883 3.325716 ACAACGGTGTTTACCTGTAGGAT 59.674 43.478 0.00 0.00 45.22 3.24 R
3188 3697 1.066002 GGAATCAATGGTGCACGATGG 59.934 52.381 15.55 12.60 0.00 3.51 R
4076 4882 0.323816 TTGCGTGGAATGGGGCAATA 60.324 50.000 0.00 0.00 40.17 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.034999 GGCCCCAATGGACGACAA 59.965 61.111 0.00 0.00 35.39 3.18
21 22 2.340328 GGCCCCAATGGACGACAAC 61.340 63.158 0.00 0.00 35.39 3.32
22 23 1.602323 GCCCCAATGGACGACAACA 60.602 57.895 0.00 0.00 35.39 3.33
23 24 1.586154 GCCCCAATGGACGACAACAG 61.586 60.000 0.00 0.00 35.39 3.16
24 25 0.036164 CCCCAATGGACGACAACAGA 59.964 55.000 0.00 0.00 35.39 3.41
25 26 1.156736 CCCAATGGACGACAACAGAC 58.843 55.000 0.00 0.00 0.00 3.51
26 27 0.790207 CCAATGGACGACAACAGACG 59.210 55.000 0.00 0.00 0.00 4.18
27 28 0.163788 CAATGGACGACAACAGACGC 59.836 55.000 0.00 0.00 0.00 5.19
28 29 0.033504 AATGGACGACAACAGACGCT 59.966 50.000 0.00 0.00 0.00 5.07
29 30 0.885879 ATGGACGACAACAGACGCTA 59.114 50.000 0.00 0.00 0.00 4.26
30 31 0.669619 TGGACGACAACAGACGCTAA 59.330 50.000 0.00 0.00 0.00 3.09
31 32 1.067364 TGGACGACAACAGACGCTAAA 59.933 47.619 0.00 0.00 0.00 1.85
32 33 1.719780 GGACGACAACAGACGCTAAAG 59.280 52.381 0.00 0.00 0.00 1.85
33 34 2.606308 GGACGACAACAGACGCTAAAGA 60.606 50.000 0.00 0.00 0.00 2.52
34 35 2.391879 ACGACAACAGACGCTAAAGAC 58.608 47.619 0.00 0.00 0.00 3.01
35 36 1.719780 CGACAACAGACGCTAAAGACC 59.280 52.381 0.00 0.00 0.00 3.85
36 37 2.607282 CGACAACAGACGCTAAAGACCT 60.607 50.000 0.00 0.00 0.00 3.85
37 38 2.731976 GACAACAGACGCTAAAGACCTG 59.268 50.000 0.00 0.00 0.00 4.00
38 39 2.102588 ACAACAGACGCTAAAGACCTGT 59.897 45.455 0.00 0.00 39.49 4.00
39 40 3.131396 CAACAGACGCTAAAGACCTGTT 58.869 45.455 0.00 0.00 45.57 3.16
40 41 3.027974 ACAGACGCTAAAGACCTGTTC 57.972 47.619 0.00 0.00 34.79 3.18
41 42 1.986378 CAGACGCTAAAGACCTGTTCG 59.014 52.381 0.00 0.00 0.00 3.95
42 43 1.884579 AGACGCTAAAGACCTGTTCGA 59.115 47.619 0.00 0.00 0.00 3.71
43 44 2.492484 AGACGCTAAAGACCTGTTCGAT 59.508 45.455 0.00 0.00 0.00 3.59
44 45 2.599082 GACGCTAAAGACCTGTTCGATG 59.401 50.000 0.00 0.00 0.00 3.84
45 46 2.230508 ACGCTAAAGACCTGTTCGATGA 59.769 45.455 0.00 0.00 0.00 2.92
46 47 2.599082 CGCTAAAGACCTGTTCGATGAC 59.401 50.000 0.00 0.00 0.00 3.06
47 48 3.673594 CGCTAAAGACCTGTTCGATGACT 60.674 47.826 0.00 0.00 0.00 3.41
48 49 3.614616 GCTAAAGACCTGTTCGATGACTG 59.385 47.826 0.00 0.00 0.00 3.51
49 50 2.086054 AAGACCTGTTCGATGACTGC 57.914 50.000 0.00 0.00 0.00 4.40
50 51 1.261480 AGACCTGTTCGATGACTGCT 58.739 50.000 0.00 0.00 0.00 4.24
51 52 1.203523 AGACCTGTTCGATGACTGCTC 59.796 52.381 0.00 0.00 0.00 4.26
52 53 0.247736 ACCTGTTCGATGACTGCTCC 59.752 55.000 0.00 0.00 0.00 4.70
53 54 0.803768 CCTGTTCGATGACTGCTCCG 60.804 60.000 0.00 0.00 0.00 4.63
54 55 0.171231 CTGTTCGATGACTGCTCCGA 59.829 55.000 0.00 0.00 0.00 4.55
55 56 0.171231 TGTTCGATGACTGCTCCGAG 59.829 55.000 0.00 0.00 32.41 4.63
56 57 0.452184 GTTCGATGACTGCTCCGAGA 59.548 55.000 0.00 0.00 32.41 4.04
57 58 1.135373 GTTCGATGACTGCTCCGAGAA 60.135 52.381 0.00 0.00 32.41 2.87
58 59 1.393603 TCGATGACTGCTCCGAGAAT 58.606 50.000 0.00 0.00 0.00 2.40
59 60 1.066152 TCGATGACTGCTCCGAGAATG 59.934 52.381 0.00 0.00 0.00 2.67
60 61 1.066152 CGATGACTGCTCCGAGAATGA 59.934 52.381 0.00 0.00 0.00 2.57
61 62 2.480244 CGATGACTGCTCCGAGAATGAA 60.480 50.000 0.00 0.00 0.00 2.57
62 63 2.662006 TGACTGCTCCGAGAATGAAG 57.338 50.000 0.00 0.00 0.00 3.02
63 64 1.285578 GACTGCTCCGAGAATGAAGC 58.714 55.000 0.00 0.00 0.00 3.86
64 65 0.107945 ACTGCTCCGAGAATGAAGCC 60.108 55.000 0.00 0.00 0.00 4.35
65 66 0.177604 CTGCTCCGAGAATGAAGCCT 59.822 55.000 0.00 0.00 0.00 4.58
66 67 1.410517 CTGCTCCGAGAATGAAGCCTA 59.589 52.381 0.00 0.00 0.00 3.93
67 68 1.137086 TGCTCCGAGAATGAAGCCTAC 59.863 52.381 0.00 0.00 0.00 3.18
68 69 1.137086 GCTCCGAGAATGAAGCCTACA 59.863 52.381 0.00 0.00 0.00 2.74
69 70 2.418746 GCTCCGAGAATGAAGCCTACAA 60.419 50.000 0.00 0.00 0.00 2.41
70 71 3.190874 CTCCGAGAATGAAGCCTACAAC 58.809 50.000 0.00 0.00 0.00 3.32
71 72 1.927174 CCGAGAATGAAGCCTACAACG 59.073 52.381 0.00 0.00 0.00 4.10
72 73 2.416836 CCGAGAATGAAGCCTACAACGA 60.417 50.000 0.00 0.00 0.00 3.85
73 74 3.250744 CGAGAATGAAGCCTACAACGAA 58.749 45.455 0.00 0.00 0.00 3.85
74 75 3.678072 CGAGAATGAAGCCTACAACGAAA 59.322 43.478 0.00 0.00 0.00 3.46
75 76 4.201628 CGAGAATGAAGCCTACAACGAAAG 60.202 45.833 0.00 0.00 0.00 2.62
76 77 3.437049 AGAATGAAGCCTACAACGAAAGC 59.563 43.478 0.00 0.00 0.00 3.51
77 78 2.248280 TGAAGCCTACAACGAAAGCA 57.752 45.000 0.00 0.00 0.00 3.91
78 79 2.778299 TGAAGCCTACAACGAAAGCAT 58.222 42.857 0.00 0.00 0.00 3.79
79 80 2.742053 TGAAGCCTACAACGAAAGCATC 59.258 45.455 0.00 0.00 0.00 3.91
80 81 2.472695 AGCCTACAACGAAAGCATCA 57.527 45.000 0.00 0.00 0.00 3.07
81 82 2.350522 AGCCTACAACGAAAGCATCAG 58.649 47.619 0.00 0.00 0.00 2.90
82 83 2.028112 AGCCTACAACGAAAGCATCAGA 60.028 45.455 0.00 0.00 0.00 3.27
83 84 2.349886 GCCTACAACGAAAGCATCAGAG 59.650 50.000 0.00 0.00 0.00 3.35
84 85 3.849911 CCTACAACGAAAGCATCAGAGA 58.150 45.455 0.00 0.00 0.00 3.10
85 86 3.862267 CCTACAACGAAAGCATCAGAGAG 59.138 47.826 0.00 0.00 0.00 3.20
86 87 2.072298 ACAACGAAAGCATCAGAGAGC 58.928 47.619 0.00 0.00 0.00 4.09
87 88 2.289320 ACAACGAAAGCATCAGAGAGCT 60.289 45.455 0.00 0.00 44.31 4.09
93 94 2.695127 AGCATCAGAGAGCTTCAAGG 57.305 50.000 0.00 0.00 38.01 3.61
94 95 1.015868 GCATCAGAGAGCTTCAAGGC 58.984 55.000 0.00 0.00 0.00 4.35
95 96 1.288350 CATCAGAGAGCTTCAAGGCG 58.712 55.000 0.00 0.00 37.29 5.52
96 97 0.177604 ATCAGAGAGCTTCAAGGCGG 59.822 55.000 0.00 0.00 37.29 6.13
97 98 1.449246 CAGAGAGCTTCAAGGCGGG 60.449 63.158 0.00 0.00 37.29 6.13
98 99 1.915769 AGAGAGCTTCAAGGCGGGT 60.916 57.895 0.00 0.00 37.29 5.28
99 100 1.003233 GAGAGCTTCAAGGCGGGTT 60.003 57.895 0.00 0.00 37.29 4.11
100 101 0.606673 GAGAGCTTCAAGGCGGGTTT 60.607 55.000 0.00 0.00 37.29 3.27
101 102 0.690762 AGAGCTTCAAGGCGGGTTTA 59.309 50.000 0.00 0.00 37.29 2.01
102 103 1.087501 GAGCTTCAAGGCGGGTTTAG 58.912 55.000 0.00 0.00 37.29 1.85
103 104 0.322546 AGCTTCAAGGCGGGTTTAGG 60.323 55.000 0.00 0.00 37.29 2.69
104 105 0.322187 GCTTCAAGGCGGGTTTAGGA 60.322 55.000 0.00 0.00 0.00 2.94
105 106 1.884928 GCTTCAAGGCGGGTTTAGGAA 60.885 52.381 0.00 0.00 0.00 3.36
106 107 2.084546 CTTCAAGGCGGGTTTAGGAAG 58.915 52.381 0.00 0.00 0.00 3.46
107 108 1.061546 TCAAGGCGGGTTTAGGAAGT 58.938 50.000 0.00 0.00 0.00 3.01
108 109 2.259012 TCAAGGCGGGTTTAGGAAGTA 58.741 47.619 0.00 0.00 0.00 2.24
109 110 2.027837 TCAAGGCGGGTTTAGGAAGTAC 60.028 50.000 0.00 0.00 0.00 2.73
110 111 1.648116 AGGCGGGTTTAGGAAGTACA 58.352 50.000 0.00 0.00 0.00 2.90
111 112 1.553704 AGGCGGGTTTAGGAAGTACAG 59.446 52.381 0.00 0.00 0.00 2.74
112 113 1.551883 GGCGGGTTTAGGAAGTACAGA 59.448 52.381 0.00 0.00 0.00 3.41
113 114 2.614779 GCGGGTTTAGGAAGTACAGAC 58.385 52.381 0.00 0.00 0.00 3.51
114 115 2.676176 GCGGGTTTAGGAAGTACAGACC 60.676 54.545 0.00 0.00 0.00 3.85
115 116 2.093816 CGGGTTTAGGAAGTACAGACCC 60.094 54.545 0.00 0.00 41.40 4.46
116 117 2.238144 GGGTTTAGGAAGTACAGACCCC 59.762 54.545 0.00 0.00 39.42 4.95
117 118 3.179685 GGTTTAGGAAGTACAGACCCCT 58.820 50.000 0.00 0.00 34.53 4.79
118 119 3.197333 GGTTTAGGAAGTACAGACCCCTC 59.803 52.174 0.00 0.00 32.91 4.30
119 120 3.836562 GTTTAGGAAGTACAGACCCCTCA 59.163 47.826 0.00 0.00 32.91 3.86
120 121 2.950990 AGGAAGTACAGACCCCTCAT 57.049 50.000 0.00 0.00 0.00 2.90
121 122 2.472029 AGGAAGTACAGACCCCTCATG 58.528 52.381 0.00 0.00 0.00 3.07
122 123 2.044492 AGGAAGTACAGACCCCTCATGA 59.956 50.000 0.00 0.00 0.00 3.07
123 124 2.838202 GGAAGTACAGACCCCTCATGAA 59.162 50.000 0.00 0.00 0.00 2.57
124 125 3.369576 GGAAGTACAGACCCCTCATGAAC 60.370 52.174 0.00 0.00 0.00 3.18
125 126 2.902608 AGTACAGACCCCTCATGAACA 58.097 47.619 0.00 0.00 0.00 3.18
126 127 2.834549 AGTACAGACCCCTCATGAACAG 59.165 50.000 0.00 0.00 0.00 3.16
127 128 2.030027 ACAGACCCCTCATGAACAGA 57.970 50.000 0.00 0.00 0.00 3.41
128 129 1.905215 ACAGACCCCTCATGAACAGAG 59.095 52.381 0.00 0.00 0.00 3.35
129 130 1.905215 CAGACCCCTCATGAACAGAGT 59.095 52.381 0.00 0.00 0.00 3.24
130 131 1.905215 AGACCCCTCATGAACAGAGTG 59.095 52.381 0.00 0.00 0.00 3.51
131 132 0.987294 ACCCCTCATGAACAGAGTGG 59.013 55.000 0.00 0.00 36.79 4.00
132 133 0.987294 CCCCTCATGAACAGAGTGGT 59.013 55.000 0.00 0.00 0.00 4.16
133 134 2.187958 CCCCTCATGAACAGAGTGGTA 58.812 52.381 0.00 0.00 0.00 3.25
134 135 2.571653 CCCCTCATGAACAGAGTGGTAA 59.428 50.000 0.00 0.00 0.00 2.85
135 136 3.200825 CCCCTCATGAACAGAGTGGTAAT 59.799 47.826 0.00 0.00 0.00 1.89
136 137 4.324563 CCCCTCATGAACAGAGTGGTAATT 60.325 45.833 0.00 0.00 0.00 1.40
137 138 5.256474 CCCTCATGAACAGAGTGGTAATTT 58.744 41.667 0.00 0.00 0.00 1.82
138 139 5.711976 CCCTCATGAACAGAGTGGTAATTTT 59.288 40.000 0.00 0.00 0.00 1.82
139 140 6.349611 CCCTCATGAACAGAGTGGTAATTTTG 60.350 42.308 0.00 0.00 0.00 2.44
140 141 6.012658 TCATGAACAGAGTGGTAATTTTGC 57.987 37.500 0.00 0.00 0.00 3.68
141 142 4.846779 TGAACAGAGTGGTAATTTTGCC 57.153 40.909 0.00 0.00 0.00 4.52
142 143 3.572255 TGAACAGAGTGGTAATTTTGCCC 59.428 43.478 0.00 0.00 31.21 5.36
151 152 1.296755 TAATTTTGCCCGCGTGCGTA 61.297 50.000 9.46 0.00 37.81 4.42
198 200 3.652057 ACCCAAGAGAGAGAGAGAGAG 57.348 52.381 0.00 0.00 0.00 3.20
200 202 2.509548 CCCAAGAGAGAGAGAGAGAGGA 59.490 54.545 0.00 0.00 0.00 3.71
201 203 3.434167 CCCAAGAGAGAGAGAGAGAGGAG 60.434 56.522 0.00 0.00 0.00 3.69
204 206 1.421646 GAGAGAGAGAGAGAGGAGGGG 59.578 61.905 0.00 0.00 0.00 4.79
205 207 1.010793 AGAGAGAGAGAGAGGAGGGGA 59.989 57.143 0.00 0.00 0.00 4.81
207 209 0.478507 GAGAGAGAGAGGAGGGGAGG 59.521 65.000 0.00 0.00 0.00 4.30
208 210 0.998945 AGAGAGAGAGGAGGGGAGGG 60.999 65.000 0.00 0.00 0.00 4.30
209 211 2.018086 AGAGAGAGGAGGGGAGGGG 61.018 68.421 0.00 0.00 0.00 4.79
286 288 1.458588 GATTCCCTCCCTCGCCTCT 60.459 63.158 0.00 0.00 0.00 3.69
287 289 1.458588 ATTCCCTCCCTCGCCTCTC 60.459 63.158 0.00 0.00 0.00 3.20
321 340 2.493973 CAGCCGCAGAGAGGAGAC 59.506 66.667 0.00 0.00 0.00 3.36
324 343 2.113433 GCCGCAGAGAGGAGACGTA 61.113 63.158 0.00 0.00 0.00 3.57
325 344 2.018544 CCGCAGAGAGGAGACGTAG 58.981 63.158 0.00 0.00 0.00 3.51
368 387 0.764369 TGGGCAGTCCTAGGCTATGG 60.764 60.000 2.96 0.00 36.20 2.74
393 418 0.958091 AGCGAGCTATACTCCTGCAG 59.042 55.000 6.78 6.78 43.01 4.41
395 420 0.958091 CGAGCTATACTCCTGCAGCT 59.042 55.000 8.66 0.00 46.71 4.24
397 423 2.079170 AGCTATACTCCTGCAGCTCA 57.921 50.000 8.66 0.00 40.25 4.26
400 426 1.962807 CTATACTCCTGCAGCTCAGCT 59.037 52.381 8.66 0.00 41.50 4.24
478 506 4.758251 TGCACCTCCATGTCGCCG 62.758 66.667 0.00 0.00 0.00 6.46
480 508 4.758251 CACCTCCATGTCGCCGCA 62.758 66.667 0.00 0.00 0.00 5.69
563 603 2.036571 CACCCTTTACGCCGTTCCC 61.037 63.158 0.00 0.00 0.00 3.97
565 605 2.666812 CCTTTACGCCGTTCCCCT 59.333 61.111 0.00 0.00 0.00 4.79
587 1035 2.357881 CCTAGTCCTACACCTGCACCTA 60.358 54.545 0.00 0.00 0.00 3.08
600 1048 1.681486 GCACCTACCTGCTCCTCCTC 61.681 65.000 0.00 0.00 34.06 3.71
601 1049 1.045911 CACCTACCTGCTCCTCCTCC 61.046 65.000 0.00 0.00 0.00 4.30
602 1050 1.830408 CCTACCTGCTCCTCCTCCG 60.830 68.421 0.00 0.00 0.00 4.63
603 1051 2.442272 TACCTGCTCCTCCTCCGC 60.442 66.667 0.00 0.00 0.00 5.54
604 1052 2.920076 CTACCTGCTCCTCCTCCGCT 62.920 65.000 0.00 0.00 0.00 5.52
605 1053 2.912987 TACCTGCTCCTCCTCCGCTC 62.913 65.000 0.00 0.00 0.00 5.03
606 1054 2.441901 CTGCTCCTCCTCCGCTCT 60.442 66.667 0.00 0.00 0.00 4.09
607 1055 2.441164 TGCTCCTCCTCCGCTCTC 60.441 66.667 0.00 0.00 0.00 3.20
608 1056 2.123897 GCTCCTCCTCCGCTCTCT 60.124 66.667 0.00 0.00 0.00 3.10
624 1072 2.430694 CTCTCTCTCTCTCTCTCGGACA 59.569 54.545 0.00 0.00 0.00 4.02
649 1097 2.202810 GCACTGCTCCCTCTACGC 60.203 66.667 0.00 0.00 0.00 4.42
660 1108 2.894565 CTCTACGCCCTCGCCTACG 61.895 68.421 0.00 0.00 39.84 3.51
678 1126 0.928922 CGCAGCACAGTGATCAGATC 59.071 55.000 4.15 3.11 0.00 2.75
680 1128 2.562635 GCAGCACAGTGATCAGATCAT 58.437 47.619 16.37 3.30 42.04 2.45
681 1129 3.725490 GCAGCACAGTGATCAGATCATA 58.275 45.455 16.37 0.00 42.04 2.15
682 1130 4.316645 GCAGCACAGTGATCAGATCATAT 58.683 43.478 16.37 5.88 42.04 1.78
683 1131 4.389382 GCAGCACAGTGATCAGATCATATC 59.611 45.833 16.37 4.01 42.04 1.63
684 1132 5.539048 CAGCACAGTGATCAGATCATATCA 58.461 41.667 16.37 6.03 42.04 2.15
685 1133 6.166982 CAGCACAGTGATCAGATCATATCAT 58.833 40.000 16.37 0.00 42.04 2.45
686 1134 6.651225 CAGCACAGTGATCAGATCATATCATT 59.349 38.462 16.37 6.44 42.04 2.57
687 1135 6.874664 AGCACAGTGATCAGATCATATCATTC 59.125 38.462 16.37 1.87 42.04 2.67
688 1136 6.649557 GCACAGTGATCAGATCATATCATTCA 59.350 38.462 16.37 0.00 42.04 2.57
689 1137 7.334671 GCACAGTGATCAGATCATATCATTCAT 59.665 37.037 16.37 0.00 42.04 2.57
690 1138 9.871238 CACAGTGATCAGATCATATCATTCATA 57.129 33.333 16.37 0.00 42.04 2.15
714 1162 2.033294 TTGCACCACGCCATGCTA 59.967 55.556 6.88 0.00 42.55 3.49
716 1164 2.436646 GCACCACGCCATGCTACT 60.437 61.111 0.00 0.00 38.84 2.57
717 1165 2.464459 GCACCACGCCATGCTACTC 61.464 63.158 0.00 0.00 38.84 2.59
718 1166 1.815421 CACCACGCCATGCTACTCC 60.815 63.158 0.00 0.00 0.00 3.85
719 1167 2.203070 CCACGCCATGCTACTCCC 60.203 66.667 0.00 0.00 0.00 4.30
720 1168 2.735772 CCACGCCATGCTACTCCCT 61.736 63.158 0.00 0.00 0.00 4.20
721 1169 1.227380 CACGCCATGCTACTCCCTC 60.227 63.158 0.00 0.00 0.00 4.30
722 1170 2.423446 CGCCATGCTACTCCCTCC 59.577 66.667 0.00 0.00 0.00 4.30
723 1171 2.832498 GCCATGCTACTCCCTCCC 59.168 66.667 0.00 0.00 0.00 4.30
724 1172 1.768077 GCCATGCTACTCCCTCCCT 60.768 63.158 0.00 0.00 0.00 4.20
725 1173 1.763546 GCCATGCTACTCCCTCCCTC 61.764 65.000 0.00 0.00 0.00 4.30
726 1174 1.124477 CCATGCTACTCCCTCCCTCC 61.124 65.000 0.00 0.00 0.00 4.30
727 1175 1.124477 CATGCTACTCCCTCCCTCCC 61.124 65.000 0.00 0.00 0.00 4.30
728 1176 1.307976 ATGCTACTCCCTCCCTCCCT 61.308 60.000 0.00 0.00 0.00 4.20
729 1177 1.458588 GCTACTCCCTCCCTCCCTG 60.459 68.421 0.00 0.00 0.00 4.45
730 1178 1.458588 CTACTCCCTCCCTCCCTGC 60.459 68.421 0.00 0.00 0.00 4.85
731 1179 2.956077 CTACTCCCTCCCTCCCTGCC 62.956 70.000 0.00 0.00 0.00 4.85
743 1191 3.677648 CCTGCCGCAGCTGCTTTT 61.678 61.111 34.22 0.00 40.80 2.27
744 1192 2.337532 CTGCCGCAGCTGCTTTTT 59.662 55.556 34.22 0.00 40.80 1.94
745 1193 2.019951 CTGCCGCAGCTGCTTTTTG 61.020 57.895 34.22 19.18 40.80 2.44
746 1194 2.028043 GCCGCAGCTGCTTTTTGT 59.972 55.556 34.22 0.00 39.32 2.83
747 1195 2.305127 GCCGCAGCTGCTTTTTGTG 61.305 57.895 34.22 17.74 39.32 3.33
748 1196 2.305127 CCGCAGCTGCTTTTTGTGC 61.305 57.895 34.22 7.95 39.32 4.57
749 1197 2.305127 CGCAGCTGCTTTTTGTGCC 61.305 57.895 34.22 3.85 39.32 5.01
750 1198 1.957695 GCAGCTGCTTTTTGTGCCC 60.958 57.895 31.33 0.00 38.21 5.36
751 1199 1.301165 CAGCTGCTTTTTGTGCCCC 60.301 57.895 0.00 0.00 0.00 5.80
752 1200 1.458209 AGCTGCTTTTTGTGCCCCT 60.458 52.632 0.00 0.00 0.00 4.79
753 1201 1.005748 GCTGCTTTTTGTGCCCCTC 60.006 57.895 0.00 0.00 0.00 4.30
754 1202 1.667722 CTGCTTTTTGTGCCCCTCC 59.332 57.895 0.00 0.00 0.00 4.30
839 1302 4.083862 GCGCCCCCGTCTTCTTCT 62.084 66.667 0.00 0.00 36.67 2.85
869 1332 4.737476 AGCCTGCTCTGCCCTCCT 62.737 66.667 0.00 0.00 0.00 3.69
870 1333 4.173924 GCCTGCTCTGCCCTCCTC 62.174 72.222 0.00 0.00 0.00 3.71
871 1334 2.365370 CCTGCTCTGCCCTCCTCT 60.365 66.667 0.00 0.00 0.00 3.69
872 1335 1.994507 CCTGCTCTGCCCTCCTCTT 60.995 63.158 0.00 0.00 0.00 2.85
873 1336 1.521616 CTGCTCTGCCCTCCTCTTC 59.478 63.158 0.00 0.00 0.00 2.87
874 1337 2.295472 CTGCTCTGCCCTCCTCTTCG 62.295 65.000 0.00 0.00 0.00 3.79
885 1353 1.825474 CTCCTCTTCGCCCTTGTCTTA 59.175 52.381 0.00 0.00 0.00 2.10
886 1354 1.549170 TCCTCTTCGCCCTTGTCTTAC 59.451 52.381 0.00 0.00 0.00 2.34
889 1357 2.996621 CTCTTCGCCCTTGTCTTACTTG 59.003 50.000 0.00 0.00 0.00 3.16
892 1360 1.689813 TCGCCCTTGTCTTACTTGACA 59.310 47.619 0.00 0.00 44.17 3.58
893 1361 1.798813 CGCCCTTGTCTTACTTGACAC 59.201 52.381 0.00 0.00 45.32 3.67
894 1362 2.805295 CGCCCTTGTCTTACTTGACACA 60.805 50.000 0.00 0.00 45.32 3.72
895 1363 2.548480 GCCCTTGTCTTACTTGACACAC 59.452 50.000 0.00 0.00 45.32 3.82
897 1365 3.809832 CCCTTGTCTTACTTGACACACAG 59.190 47.826 0.00 0.00 45.32 3.66
898 1366 4.442893 CCCTTGTCTTACTTGACACACAGA 60.443 45.833 0.00 0.00 45.32 3.41
899 1367 4.508124 CCTTGTCTTACTTGACACACAGAC 59.492 45.833 0.00 0.00 45.32 3.51
900 1368 4.729227 TGTCTTACTTGACACACAGACA 57.271 40.909 0.00 0.00 41.43 3.41
901 1369 5.079689 TGTCTTACTTGACACACAGACAA 57.920 39.130 0.00 0.00 41.43 3.18
902 1370 5.483811 TGTCTTACTTGACACACAGACAAA 58.516 37.500 0.00 0.00 41.43 2.83
904 1372 5.350365 GTCTTACTTGACACACAGACAAACA 59.650 40.000 0.00 0.00 36.97 2.83
906 1374 3.407698 ACTTGACACACAGACAAACACA 58.592 40.909 0.00 0.00 31.78 3.72
907 1375 3.188460 ACTTGACACACAGACAAACACAC 59.812 43.478 0.00 0.00 31.78 3.82
908 1376 2.080693 TGACACACAGACAAACACACC 58.919 47.619 0.00 0.00 0.00 4.16
909 1377 1.062002 GACACACAGACAAACACACCG 59.938 52.381 0.00 0.00 0.00 4.94
910 1378 1.083489 CACACAGACAAACACACCGT 58.917 50.000 0.00 0.00 0.00 4.83
911 1379 1.062002 CACACAGACAAACACACCGTC 59.938 52.381 0.00 0.00 0.00 4.79
912 1380 0.300491 CACAGACAAACACACCGTCG 59.700 55.000 0.00 0.00 34.80 5.12
913 1381 1.275657 CAGACAAACACACCGTCGC 59.724 57.895 0.00 0.00 34.80 5.19
914 1382 1.885850 AGACAAACACACCGTCGCC 60.886 57.895 0.00 0.00 34.80 5.54
915 1383 2.888998 GACAAACACACCGTCGCCC 61.889 63.158 0.00 0.00 0.00 6.13
916 1384 2.897846 CAAACACACCGTCGCCCA 60.898 61.111 0.00 0.00 0.00 5.36
917 1385 2.112297 AAACACACCGTCGCCCAT 59.888 55.556 0.00 0.00 0.00 4.00
918 1386 1.527380 AAACACACCGTCGCCCATT 60.527 52.632 0.00 0.00 0.00 3.16
922 1390 2.359354 CACCGTCGCCCATTTCCA 60.359 61.111 0.00 0.00 0.00 3.53
931 1399 1.595093 GCCCATTTCCACTTGACCCG 61.595 60.000 0.00 0.00 0.00 5.28
954 1422 4.323477 CTTGACCGGCCCCGTTCA 62.323 66.667 0.00 2.67 38.99 3.18
1554 2025 3.429141 GACGTCGTCTCCCTCGCA 61.429 66.667 18.09 0.00 0.00 5.10
1671 2142 4.479993 GCCTGCTCCCACTCGCAT 62.480 66.667 0.00 0.00 35.32 4.73
1884 2361 3.826754 CACTCGCCTCAGCCGCTA 61.827 66.667 0.00 0.00 34.57 4.26
1926 2403 0.675633 GCAAGGACCTGCACATGTTT 59.324 50.000 0.00 0.00 42.17 2.83
2033 2510 0.822164 GTCCTCGCCAAAGGTAGCTA 59.178 55.000 0.00 0.00 37.69 3.32
2050 2531 8.411991 AGGTAGCTACTTCTCCTTTCATATAC 57.588 38.462 22.74 0.70 0.00 1.47
2398 2883 1.742880 CGTCGTCTGGTCCCTCGTA 60.743 63.158 0.00 0.00 0.00 3.43
2411 2896 4.210331 GTCCCTCGTATCCTACAGGTAAA 58.790 47.826 0.00 0.00 36.34 2.01
2428 2920 2.817538 AAACACCGTTGTTCTGAACG 57.182 45.000 15.18 4.83 45.69 3.95
2453 2948 6.592798 AAGCAAATTGTTTGTTCATCAGTG 57.407 33.333 0.00 0.00 42.56 3.66
2458 2953 6.698008 AATTGTTTGTTCATCAGTGACTCA 57.302 33.333 0.00 0.00 33.11 3.41
2471 2966 5.614308 TCAGTGACTCAACATTTGATCTGT 58.386 37.500 0.00 0.00 39.30 3.41
2596 3091 0.749454 GGCCATGTTCAGCCTAGGTG 60.749 60.000 11.31 7.78 46.14 4.00
2614 3109 0.033090 TGTGCACAGCTCTGACTCTG 59.967 55.000 17.42 1.84 36.45 3.35
2723 3218 2.046314 GCCTGCGGGAACAAGCTA 60.046 61.111 18.31 0.00 34.75 3.32
2730 3225 2.824489 GGAACAAGCTAGCGGCCC 60.824 66.667 9.55 7.30 43.05 5.80
2837 3332 2.779755 TCGCCATTGTTCAGGTACAT 57.220 45.000 0.00 0.00 0.00 2.29
2838 3333 3.066291 TCGCCATTGTTCAGGTACATT 57.934 42.857 0.00 0.00 0.00 2.71
2840 3335 4.188462 TCGCCATTGTTCAGGTACATTAG 58.812 43.478 0.00 0.00 0.00 1.73
2868 3363 3.287222 CCAGTTGAGGGTCTTGTTTTGA 58.713 45.455 0.00 0.00 0.00 2.69
2871 3366 5.102313 CAGTTGAGGGTCTTGTTTTGAAAC 58.898 41.667 0.00 0.00 39.33 2.78
2872 3367 5.016831 AGTTGAGGGTCTTGTTTTGAAACT 58.983 37.500 7.97 0.00 39.59 2.66
2875 3370 5.751586 TGAGGGTCTTGTTTTGAAACTAGT 58.248 37.500 14.52 0.00 40.82 2.57
2881 3386 7.281549 GGGTCTTGTTTTGAAACTAGTACTCAA 59.718 37.037 13.65 13.65 40.82 3.02
2943 3448 3.060615 GCTGCTCTGCCACAAGGG 61.061 66.667 0.00 0.00 40.85 3.95
3108 3613 2.863809 TCCCACCTTTTCTCTTCTTGC 58.136 47.619 0.00 0.00 0.00 4.01
3117 3626 5.458041 TTTTCTCTTCTTGCAATTGGAGG 57.542 39.130 7.72 4.99 0.00 4.30
3188 3697 7.473735 TGATTCCTATCCTACTCATCATCAC 57.526 40.000 0.00 0.00 0.00 3.06
3198 3710 1.596260 CTCATCATCACCATCGTGCAC 59.404 52.381 6.82 6.82 40.04 4.57
3233 3750 0.734942 AATTTGACATGCTGCTGCGC 60.735 50.000 11.21 0.00 43.34 6.09
3275 3792 6.947644 TTGATTCATTGAGATGGTGGTATG 57.052 37.500 0.00 0.00 33.93 2.39
3276 3793 6.251255 TGATTCATTGAGATGGTGGTATGA 57.749 37.500 0.00 0.00 33.93 2.15
3278 3795 6.938596 TGATTCATTGAGATGGTGGTATGATC 59.061 38.462 0.00 0.00 33.93 2.92
3288 3971 3.648067 TGGTGGTATGATCCTGATTCCTC 59.352 47.826 0.00 0.00 0.00 3.71
3289 3972 3.306364 GGTGGTATGATCCTGATTCCTCG 60.306 52.174 0.00 0.00 0.00 4.63
3309 3992 2.287103 CGCATGATGATGGAACTCTGTG 59.713 50.000 0.00 0.00 0.00 3.66
3371 4054 4.202161 CCCATCACACTGGTCTACTACATC 60.202 50.000 0.00 0.00 34.23 3.06
3438 4160 2.286872 ACAGCAGCATCATTCAGTAGC 58.713 47.619 0.00 0.00 0.00 3.58
3457 4185 2.061028 GCATCGTTTCCTTTTGCTTGG 58.939 47.619 0.00 0.00 0.00 3.61
3478 4206 4.200092 GGTTGGTTGATCCCAGATTAGAC 58.800 47.826 0.00 0.00 35.49 2.59
3557 4320 1.498865 ATGGAAAGCGGATTAGCGCG 61.499 55.000 0.00 0.00 43.00 6.86
3596 4359 5.904941 TGGCTAATTTGTAAGGCATTGATG 58.095 37.500 0.00 0.00 42.67 3.07
3630 4393 6.686130 TCGAGATTTGTAACTCTTTCGTTC 57.314 37.500 0.00 0.00 0.00 3.95
3631 4394 6.210796 TCGAGATTTGTAACTCTTTCGTTCA 58.789 36.000 0.00 0.00 0.00 3.18
3632 4395 6.698329 TCGAGATTTGTAACTCTTTCGTTCAA 59.302 34.615 0.00 0.00 0.00 2.69
3656 4430 7.787725 ACTATCGTATGGAATTTCCTTCAAC 57.212 36.000 16.25 5.75 37.46 3.18
3659 4433 4.998672 TCGTATGGAATTTCCTTCAACGTT 59.001 37.500 16.25 0.00 37.46 3.99
3674 4448 8.020819 TCCTTCAACGTTATGTGAAATTCATTC 58.979 33.333 0.00 0.00 38.60 2.67
3675 4449 7.807433 CCTTCAACGTTATGTGAAATTCATTCA 59.193 33.333 0.00 0.00 45.71 2.57
3693 4467 9.825972 ATTCATTCATTGTAGTAGTTTCGTTTG 57.174 29.630 0.00 0.00 0.00 2.93
3694 4468 8.373048 TCATTCATTGTAGTAGTTTCGTTTGT 57.627 30.769 0.00 0.00 0.00 2.83
3695 4469 9.478768 TCATTCATTGTAGTAGTTTCGTTTGTA 57.521 29.630 0.00 0.00 0.00 2.41
3696 4470 9.525007 CATTCATTGTAGTAGTTTCGTTTGTAC 57.475 33.333 0.00 0.00 0.00 2.90
3698 4472 9.964303 TTCATTGTAGTAGTTTCGTTTGTACTA 57.036 29.630 0.00 0.00 0.00 1.82
3699 4473 9.398170 TCATTGTAGTAGTTTCGTTTGTACTAC 57.602 33.333 15.10 15.10 44.21 2.73
3706 4480 8.345224 GTAGTTTCGTTTGTACTACTTCAAGT 57.655 34.615 0.00 0.00 40.51 3.16
3707 4481 7.230466 AGTTTCGTTTGTACTACTTCAAGTG 57.770 36.000 0.00 0.00 0.00 3.16
3721 4495 5.720202 ACTTCAAGTGTTTGTTTTCCCTTC 58.280 37.500 0.00 0.00 35.73 3.46
3724 4498 4.642885 TCAAGTGTTTGTTTTCCCTTCGAT 59.357 37.500 0.00 0.00 35.73 3.59
3725 4499 4.568152 AGTGTTTGTTTTCCCTTCGATG 57.432 40.909 0.00 0.00 0.00 3.84
3726 4500 3.951680 AGTGTTTGTTTTCCCTTCGATGT 59.048 39.130 0.00 0.00 0.00 3.06
3727 4501 4.401202 AGTGTTTGTTTTCCCTTCGATGTT 59.599 37.500 0.00 0.00 0.00 2.71
3728 4502 4.738252 GTGTTTGTTTTCCCTTCGATGTTC 59.262 41.667 0.00 0.00 0.00 3.18
3729 4503 4.202070 TGTTTGTTTTCCCTTCGATGTTCC 60.202 41.667 0.00 0.00 0.00 3.62
3732 4506 3.328343 TGTTTTCCCTTCGATGTTCCCTA 59.672 43.478 0.00 0.00 0.00 3.53
3733 4507 4.202482 TGTTTTCCCTTCGATGTTCCCTAA 60.202 41.667 0.00 0.00 0.00 2.69
3735 4509 4.644163 TTCCCTTCGATGTTCCCTAAAA 57.356 40.909 0.00 0.00 0.00 1.52
3736 4510 4.644163 TCCCTTCGATGTTCCCTAAAAA 57.356 40.909 0.00 0.00 0.00 1.94
3775 4549 7.490402 GGAGAATATTTTGTGCTTTCATGAAGG 59.510 37.037 12.97 12.97 35.82 3.46
3788 4562 1.987770 CATGAAGGAAAACGTGCATGC 59.012 47.619 11.82 11.82 0.00 4.06
3805 4579 7.096230 ACGTGCATGCTTTATTGTTTTCTTTAC 60.096 33.333 20.33 0.94 0.00 2.01
3820 4594 3.207778 TCTTTACGGGAACAAAGGTGTG 58.792 45.455 0.00 0.00 38.27 3.82
3868 4653 2.218603 TGGTCTTTTGTTCTCTTCCGC 58.781 47.619 0.00 0.00 0.00 5.54
3875 4660 1.334160 TGTTCTCTTCCGCTGTGGTA 58.666 50.000 7.20 0.00 39.52 3.25
3879 4664 3.014304 TCTCTTCCGCTGTGGTAGTAT 57.986 47.619 12.72 0.00 36.56 2.12
3880 4665 4.160642 TCTCTTCCGCTGTGGTAGTATA 57.839 45.455 12.72 0.00 36.56 1.47
3881 4666 4.135306 TCTCTTCCGCTGTGGTAGTATAG 58.865 47.826 12.72 4.69 36.56 1.31
3882 4667 4.135306 CTCTTCCGCTGTGGTAGTATAGA 58.865 47.826 12.72 4.90 36.56 1.98
3883 4668 4.135306 TCTTCCGCTGTGGTAGTATAGAG 58.865 47.826 12.72 0.00 36.56 2.43
3884 4669 2.860009 TCCGCTGTGGTAGTATAGAGG 58.140 52.381 7.20 0.00 39.52 3.69
3885 4670 1.887198 CCGCTGTGGTAGTATAGAGGG 59.113 57.143 0.00 0.00 0.00 4.30
3886 4671 2.488528 CCGCTGTGGTAGTATAGAGGGA 60.489 54.545 0.00 0.00 0.00 4.20
3887 4672 2.814919 CGCTGTGGTAGTATAGAGGGAG 59.185 54.545 0.00 0.00 0.00 4.30
3888 4673 3.748027 CGCTGTGGTAGTATAGAGGGAGT 60.748 52.174 0.00 0.00 0.00 3.85
3889 4674 4.504514 CGCTGTGGTAGTATAGAGGGAGTA 60.505 50.000 0.00 0.00 0.00 2.59
3910 4695 2.223711 ACAAAACATTGACCCGAAGCAC 60.224 45.455 0.00 0.00 0.00 4.40
3921 4708 3.442996 CGAAGCACGGAAAGGAGAT 57.557 52.632 0.00 0.00 38.46 2.75
3931 4718 1.168714 GAAAGGAGATGGTGGTGTGC 58.831 55.000 0.00 0.00 0.00 4.57
3980 4772 5.222109 TGGAAATCAATGGGTGAAGAGAAGA 60.222 40.000 0.00 0.00 40.50 2.87
3993 4785 5.127845 GTGAAGAGAAGAGGATGATGGTGTA 59.872 44.000 0.00 0.00 0.00 2.90
3994 4786 5.127845 TGAAGAGAAGAGGATGATGGTGTAC 59.872 44.000 0.00 0.00 0.00 2.90
3995 4787 3.634448 AGAGAAGAGGATGATGGTGTACG 59.366 47.826 0.00 0.00 0.00 3.67
3996 4788 3.632333 AGAAGAGGATGATGGTGTACGA 58.368 45.455 0.00 0.00 0.00 3.43
3997 4789 3.634448 AGAAGAGGATGATGGTGTACGAG 59.366 47.826 0.00 0.00 0.00 4.18
3998 4790 3.019799 AGAGGATGATGGTGTACGAGT 57.980 47.619 0.00 0.00 0.00 4.18
3999 4791 2.952978 AGAGGATGATGGTGTACGAGTC 59.047 50.000 0.00 0.00 0.00 3.36
4000 4792 1.676529 AGGATGATGGTGTACGAGTCG 59.323 52.381 11.85 11.85 0.00 4.18
4002 4794 1.674441 GATGATGGTGTACGAGTCGGA 59.326 52.381 18.30 5.06 0.00 4.55
4003 4795 0.806868 TGATGGTGTACGAGTCGGAC 59.193 55.000 21.31 21.31 41.64 4.79
4017 4811 1.669760 CGGACAAAGGCGTTGGCTA 60.670 57.895 18.39 0.00 45.58 3.93
4053 4852 1.651240 ATGCGCAATCGAAGCAAGCT 61.651 50.000 17.11 0.00 44.51 3.74
4057 4856 3.960174 CGCAATCGAAGCAAGCTGCAA 62.960 52.381 12.79 0.00 41.62 4.08
4074 4880 4.792057 GCTGCAATCTAGTGAAATGATGCC 60.792 45.833 0.00 0.00 0.00 4.40
4076 4882 3.887716 GCAATCTAGTGAAATGATGCCCT 59.112 43.478 0.00 0.00 0.00 5.19
4080 4886 7.591165 CAATCTAGTGAAATGATGCCCTATTG 58.409 38.462 0.00 0.00 0.00 1.90
4081 4887 5.065914 TCTAGTGAAATGATGCCCTATTGC 58.934 41.667 0.00 0.00 0.00 3.56
4082 4888 2.961062 AGTGAAATGATGCCCTATTGCC 59.039 45.455 0.00 0.00 0.00 4.52
4083 4889 2.036346 GTGAAATGATGCCCTATTGCCC 59.964 50.000 0.00 0.00 0.00 5.36
4084 4890 1.620323 GAAATGATGCCCTATTGCCCC 59.380 52.381 0.00 0.00 0.00 5.80
4085 4891 0.562177 AATGATGCCCTATTGCCCCA 59.438 50.000 0.00 0.00 0.00 4.96
4086 4892 0.788383 ATGATGCCCTATTGCCCCAT 59.212 50.000 0.00 0.00 0.00 4.00
4087 4893 0.562177 TGATGCCCTATTGCCCCATT 59.438 50.000 0.00 0.00 0.00 3.16
4088 4894 1.260544 GATGCCCTATTGCCCCATTC 58.739 55.000 0.00 0.00 0.00 2.67
4089 4895 0.178924 ATGCCCTATTGCCCCATTCC 60.179 55.000 0.00 0.00 0.00 3.01
4090 4896 1.232792 GCCCTATTGCCCCATTCCA 59.767 57.895 0.00 0.00 0.00 3.53
4091 4897 1.115326 GCCCTATTGCCCCATTCCAC 61.115 60.000 0.00 0.00 0.00 4.02
4092 4898 0.823356 CCCTATTGCCCCATTCCACG 60.823 60.000 0.00 0.00 0.00 4.94
4093 4899 1.455383 CCTATTGCCCCATTCCACGC 61.455 60.000 0.00 0.00 0.00 5.34
4094 4900 0.751277 CTATTGCCCCATTCCACGCA 60.751 55.000 0.00 0.00 0.00 5.24
4095 4901 0.323816 TATTGCCCCATTCCACGCAA 60.324 50.000 0.00 0.00 44.62 4.85
4096 4902 0.977108 ATTGCCCCATTCCACGCAAT 60.977 50.000 0.47 0.47 44.43 3.56
4097 4903 1.886253 TTGCCCCATTCCACGCAATG 61.886 55.000 0.00 0.00 36.36 2.82
4109 4915 2.813754 CCACGCAATGGTATATCCTTGG 59.186 50.000 3.57 0.00 44.46 3.61
4110 4916 2.813754 CACGCAATGGTATATCCTTGGG 59.186 50.000 13.99 13.99 39.98 4.12
4111 4917 2.708861 ACGCAATGGTATATCCTTGGGA 59.291 45.455 20.03 0.00 38.84 4.37
4112 4918 3.074412 CGCAATGGTATATCCTTGGGAC 58.926 50.000 11.17 0.00 38.35 4.46
4113 4919 3.074412 GCAATGGTATATCCTTGGGACG 58.926 50.000 3.57 0.00 32.98 4.79
4114 4920 3.496160 GCAATGGTATATCCTTGGGACGT 60.496 47.826 3.57 0.00 32.98 4.34
4115 4921 4.262721 GCAATGGTATATCCTTGGGACGTA 60.263 45.833 3.57 0.00 32.98 3.57
4116 4922 5.479306 CAATGGTATATCCTTGGGACGTAG 58.521 45.833 0.00 0.00 32.98 3.51
4117 4923 4.188937 TGGTATATCCTTGGGACGTAGT 57.811 45.455 0.00 0.00 40.01 2.73
4118 4924 3.893200 TGGTATATCCTTGGGACGTAGTG 59.107 47.826 0.00 0.00 37.91 2.74
4119 4925 4.631911 TGGTATATCCTTGGGACGTAGTGT 60.632 45.833 0.00 0.00 37.91 3.55
4162 4969 3.882888 TGAACTTAGAAAGGGCACACAAG 59.117 43.478 0.00 0.00 0.00 3.16
4204 5011 1.003331 GTCCTCGTAGCTGTCAGATCG 60.003 57.143 3.32 3.93 0.00 3.69
4210 5017 2.410902 CGTAGCTGTCAGATCGAGATCG 60.411 54.545 3.32 0.00 42.48 3.69
4220 5027 2.904664 TCGAGATCGAATGCATGGC 58.095 52.632 0.00 0.00 46.30 4.40
4242 5049 7.568433 TGGCAATTTTTAAGAAATTACGTTGC 58.432 30.769 0.00 0.00 0.00 4.17
4298 5105 3.790058 TGACAATTTTCGCTTTCGTACG 58.210 40.909 9.53 9.53 36.96 3.67
4316 5123 1.944709 ACGTGGCAAGTCCTTTACAAC 59.055 47.619 0.00 0.00 35.26 3.32
4333 5140 2.664851 CGGCGTGGCAAGTTCAGA 60.665 61.111 0.00 0.00 0.00 3.27
4350 5157 5.302568 AGTTCAGATGTTTTGGCATGAGAAA 59.697 36.000 0.00 0.00 0.00 2.52
4357 5164 4.202233 TGTTTTGGCATGAGAAATCTTGCA 60.202 37.500 15.30 0.00 40.97 4.08
4366 5173 5.878332 TGAGAAATCTTGCATTCGCTAAA 57.122 34.783 3.69 0.00 39.64 1.85
4367 5174 6.252967 TGAGAAATCTTGCATTCGCTAAAA 57.747 33.333 3.69 0.00 39.64 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.609299 TCGTCCATTGGGGCCTCA 60.609 61.111 0.00 0.00 34.31 3.86
1 2 2.124695 GTCGTCCATTGGGGCCTC 60.125 66.667 0.84 0.00 34.31 4.70
2 3 2.534396 TTGTCGTCCATTGGGGCCT 61.534 57.895 0.84 0.00 34.31 5.19
3 4 2.034999 TTGTCGTCCATTGGGGCC 59.965 61.111 2.09 0.00 34.31 5.80
4 5 1.586154 CTGTTGTCGTCCATTGGGGC 61.586 60.000 2.09 0.00 36.21 5.80
5 6 0.036164 TCTGTTGTCGTCCATTGGGG 59.964 55.000 2.09 0.00 38.37 4.96
6 7 1.156736 GTCTGTTGTCGTCCATTGGG 58.843 55.000 2.09 0.00 0.00 4.12
7 8 0.790207 CGTCTGTTGTCGTCCATTGG 59.210 55.000 0.00 0.00 0.00 3.16
8 9 0.163788 GCGTCTGTTGTCGTCCATTG 59.836 55.000 0.00 0.00 0.00 2.82
9 10 0.033504 AGCGTCTGTTGTCGTCCATT 59.966 50.000 0.00 0.00 0.00 3.16
10 11 0.885879 TAGCGTCTGTTGTCGTCCAT 59.114 50.000 0.00 0.00 0.00 3.41
11 12 0.669619 TTAGCGTCTGTTGTCGTCCA 59.330 50.000 0.00 0.00 0.00 4.02
12 13 1.719780 CTTTAGCGTCTGTTGTCGTCC 59.280 52.381 0.00 0.00 0.00 4.79
13 14 2.404361 GTCTTTAGCGTCTGTTGTCGTC 59.596 50.000 0.00 0.00 0.00 4.20
14 15 2.391879 GTCTTTAGCGTCTGTTGTCGT 58.608 47.619 0.00 0.00 0.00 4.34
15 16 1.719780 GGTCTTTAGCGTCTGTTGTCG 59.280 52.381 0.00 0.00 0.00 4.35
16 17 2.731976 CAGGTCTTTAGCGTCTGTTGTC 59.268 50.000 0.00 0.00 0.00 3.18
17 18 2.102588 ACAGGTCTTTAGCGTCTGTTGT 59.897 45.455 0.00 0.00 35.44 3.32
18 19 2.755650 ACAGGTCTTTAGCGTCTGTTG 58.244 47.619 0.00 0.00 35.44 3.33
19 20 3.470645 AACAGGTCTTTAGCGTCTGTT 57.529 42.857 0.00 0.00 41.89 3.16
20 21 2.607282 CGAACAGGTCTTTAGCGTCTGT 60.607 50.000 0.00 0.00 39.97 3.41
21 22 1.986378 CGAACAGGTCTTTAGCGTCTG 59.014 52.381 0.00 0.00 0.00 3.51
22 23 1.884579 TCGAACAGGTCTTTAGCGTCT 59.115 47.619 0.00 0.00 0.00 4.18
23 24 2.342910 TCGAACAGGTCTTTAGCGTC 57.657 50.000 0.00 0.00 0.00 5.19
24 25 2.230508 TCATCGAACAGGTCTTTAGCGT 59.769 45.455 0.00 0.00 0.00 5.07
25 26 2.599082 GTCATCGAACAGGTCTTTAGCG 59.401 50.000 0.00 0.00 0.00 4.26
26 27 3.614616 CAGTCATCGAACAGGTCTTTAGC 59.385 47.826 0.00 0.00 0.00 3.09
27 28 3.614616 GCAGTCATCGAACAGGTCTTTAG 59.385 47.826 0.00 0.00 0.00 1.85
28 29 3.258372 AGCAGTCATCGAACAGGTCTTTA 59.742 43.478 0.00 0.00 0.00 1.85
29 30 2.037772 AGCAGTCATCGAACAGGTCTTT 59.962 45.455 0.00 0.00 0.00 2.52
30 31 1.620819 AGCAGTCATCGAACAGGTCTT 59.379 47.619 0.00 0.00 0.00 3.01
31 32 1.203523 GAGCAGTCATCGAACAGGTCT 59.796 52.381 5.02 0.00 32.41 3.85
32 33 1.634702 GAGCAGTCATCGAACAGGTC 58.365 55.000 0.00 0.00 0.00 3.85
33 34 0.247736 GGAGCAGTCATCGAACAGGT 59.752 55.000 0.00 0.00 0.00 4.00
34 35 0.803768 CGGAGCAGTCATCGAACAGG 60.804 60.000 0.00 0.00 0.00 4.00
35 36 0.171231 TCGGAGCAGTCATCGAACAG 59.829 55.000 0.00 0.00 0.00 3.16
36 37 0.171231 CTCGGAGCAGTCATCGAACA 59.829 55.000 0.00 0.00 0.00 3.18
37 38 0.452184 TCTCGGAGCAGTCATCGAAC 59.548 55.000 0.00 0.00 0.00 3.95
38 39 1.173913 TTCTCGGAGCAGTCATCGAA 58.826 50.000 0.00 0.00 0.00 3.71
39 40 1.066152 CATTCTCGGAGCAGTCATCGA 59.934 52.381 0.00 0.00 0.00 3.59
40 41 1.066152 TCATTCTCGGAGCAGTCATCG 59.934 52.381 0.00 0.00 0.00 3.84
41 42 2.879002 TCATTCTCGGAGCAGTCATC 57.121 50.000 0.00 0.00 0.00 2.92
42 43 2.741228 GCTTCATTCTCGGAGCAGTCAT 60.741 50.000 0.00 0.00 0.00 3.06
43 44 1.404717 GCTTCATTCTCGGAGCAGTCA 60.405 52.381 0.00 0.00 0.00 3.41
44 45 1.285578 GCTTCATTCTCGGAGCAGTC 58.714 55.000 0.00 0.00 0.00 3.51
45 46 0.107945 GGCTTCATTCTCGGAGCAGT 60.108 55.000 0.00 0.00 0.00 4.40
46 47 0.177604 AGGCTTCATTCTCGGAGCAG 59.822 55.000 0.00 0.00 0.00 4.24
47 48 1.137086 GTAGGCTTCATTCTCGGAGCA 59.863 52.381 0.00 0.00 0.00 4.26
48 49 1.137086 TGTAGGCTTCATTCTCGGAGC 59.863 52.381 0.00 0.00 0.00 4.70
49 50 3.190874 GTTGTAGGCTTCATTCTCGGAG 58.809 50.000 0.00 0.00 0.00 4.63
50 51 2.416836 CGTTGTAGGCTTCATTCTCGGA 60.417 50.000 0.00 0.00 0.00 4.55
51 52 1.927174 CGTTGTAGGCTTCATTCTCGG 59.073 52.381 0.00 0.00 0.00 4.63
52 53 2.876091 TCGTTGTAGGCTTCATTCTCG 58.124 47.619 0.00 0.00 0.00 4.04
53 54 4.436183 GCTTTCGTTGTAGGCTTCATTCTC 60.436 45.833 0.00 0.00 0.00 2.87
54 55 3.437049 GCTTTCGTTGTAGGCTTCATTCT 59.563 43.478 0.00 0.00 0.00 2.40
55 56 3.188460 TGCTTTCGTTGTAGGCTTCATTC 59.812 43.478 0.00 0.00 0.00 2.67
56 57 3.146066 TGCTTTCGTTGTAGGCTTCATT 58.854 40.909 0.00 0.00 0.00 2.57
57 58 2.778299 TGCTTTCGTTGTAGGCTTCAT 58.222 42.857 0.00 0.00 0.00 2.57
58 59 2.248280 TGCTTTCGTTGTAGGCTTCA 57.752 45.000 0.00 0.00 0.00 3.02
59 60 2.742053 TGATGCTTTCGTTGTAGGCTTC 59.258 45.455 0.00 0.00 0.00 3.86
60 61 2.744202 CTGATGCTTTCGTTGTAGGCTT 59.256 45.455 0.00 0.00 0.00 4.35
61 62 2.028112 TCTGATGCTTTCGTTGTAGGCT 60.028 45.455 0.00 0.00 0.00 4.58
62 63 2.346803 TCTGATGCTTTCGTTGTAGGC 58.653 47.619 0.00 0.00 0.00 3.93
63 64 3.849911 TCTCTGATGCTTTCGTTGTAGG 58.150 45.455 0.00 0.00 0.00 3.18
64 65 3.305629 GCTCTCTGATGCTTTCGTTGTAG 59.694 47.826 0.00 0.00 0.00 2.74
65 66 3.056536 AGCTCTCTGATGCTTTCGTTGTA 60.057 43.478 0.38 0.00 35.86 2.41
66 67 2.072298 GCTCTCTGATGCTTTCGTTGT 58.928 47.619 0.00 0.00 0.00 3.32
67 68 2.344950 AGCTCTCTGATGCTTTCGTTG 58.655 47.619 0.38 0.00 35.86 4.10
68 69 2.758736 AGCTCTCTGATGCTTTCGTT 57.241 45.000 0.38 0.00 35.86 3.85
69 70 2.758736 AAGCTCTCTGATGCTTTCGT 57.241 45.000 10.81 0.00 45.91 3.85
74 75 1.407162 GCCTTGAAGCTCTCTGATGCT 60.407 52.381 0.00 0.38 41.82 3.79
75 76 1.015868 GCCTTGAAGCTCTCTGATGC 58.984 55.000 0.00 0.00 0.00 3.91
76 77 1.288350 CGCCTTGAAGCTCTCTGATG 58.712 55.000 0.00 0.00 0.00 3.07
77 78 0.177604 CCGCCTTGAAGCTCTCTGAT 59.822 55.000 0.00 0.00 0.00 2.90
78 79 1.593787 CCGCCTTGAAGCTCTCTGA 59.406 57.895 0.00 0.00 0.00 3.27
79 80 1.449246 CCCGCCTTGAAGCTCTCTG 60.449 63.158 0.00 0.00 0.00 3.35
80 81 1.484444 AACCCGCCTTGAAGCTCTCT 61.484 55.000 0.00 0.00 0.00 3.10
81 82 0.606673 AAACCCGCCTTGAAGCTCTC 60.607 55.000 0.00 0.00 0.00 3.20
82 83 0.690762 TAAACCCGCCTTGAAGCTCT 59.309 50.000 0.00 0.00 0.00 4.09
83 84 1.087501 CTAAACCCGCCTTGAAGCTC 58.912 55.000 0.00 0.00 0.00 4.09
84 85 0.322546 CCTAAACCCGCCTTGAAGCT 60.323 55.000 0.00 0.00 0.00 3.74
85 86 0.322187 TCCTAAACCCGCCTTGAAGC 60.322 55.000 0.00 0.00 0.00 3.86
86 87 2.084546 CTTCCTAAACCCGCCTTGAAG 58.915 52.381 0.00 0.00 0.00 3.02
87 88 1.422402 ACTTCCTAAACCCGCCTTGAA 59.578 47.619 0.00 0.00 0.00 2.69
88 89 1.061546 ACTTCCTAAACCCGCCTTGA 58.938 50.000 0.00 0.00 0.00 3.02
89 90 2.289819 TGTACTTCCTAAACCCGCCTTG 60.290 50.000 0.00 0.00 0.00 3.61
90 91 1.980036 TGTACTTCCTAAACCCGCCTT 59.020 47.619 0.00 0.00 0.00 4.35
91 92 1.553704 CTGTACTTCCTAAACCCGCCT 59.446 52.381 0.00 0.00 0.00 5.52
92 93 1.551883 TCTGTACTTCCTAAACCCGCC 59.448 52.381 0.00 0.00 0.00 6.13
93 94 2.614779 GTCTGTACTTCCTAAACCCGC 58.385 52.381 0.00 0.00 0.00 6.13
94 95 2.093816 GGGTCTGTACTTCCTAAACCCG 60.094 54.545 0.00 0.00 35.87 5.28
95 96 2.238144 GGGGTCTGTACTTCCTAAACCC 59.762 54.545 0.00 0.00 43.40 4.11
96 97 3.179685 AGGGGTCTGTACTTCCTAAACC 58.820 50.000 0.00 0.00 30.94 3.27
97 98 3.836562 TGAGGGGTCTGTACTTCCTAAAC 59.163 47.826 0.00 0.00 32.20 2.01
98 99 4.136341 TGAGGGGTCTGTACTTCCTAAA 57.864 45.455 0.00 0.00 32.20 1.85
99 100 3.839323 TGAGGGGTCTGTACTTCCTAA 57.161 47.619 0.00 0.00 32.20 2.69
100 101 3.271225 TCATGAGGGGTCTGTACTTCCTA 59.729 47.826 0.00 0.00 32.20 2.94
101 102 2.044492 TCATGAGGGGTCTGTACTTCCT 59.956 50.000 0.00 0.00 33.85 3.36
102 103 2.467880 TCATGAGGGGTCTGTACTTCC 58.532 52.381 0.00 0.00 0.00 3.46
103 104 3.260884 TGTTCATGAGGGGTCTGTACTTC 59.739 47.826 0.00 0.00 0.00 3.01
104 105 3.248024 TGTTCATGAGGGGTCTGTACTT 58.752 45.455 0.00 0.00 0.00 2.24
105 106 2.834549 CTGTTCATGAGGGGTCTGTACT 59.165 50.000 0.00 0.00 0.00 2.73
106 107 2.832129 TCTGTTCATGAGGGGTCTGTAC 59.168 50.000 0.00 0.00 0.00 2.90
107 108 3.099905 CTCTGTTCATGAGGGGTCTGTA 58.900 50.000 0.00 0.00 0.00 2.74
108 109 1.905215 CTCTGTTCATGAGGGGTCTGT 59.095 52.381 0.00 0.00 0.00 3.41
109 110 1.905215 ACTCTGTTCATGAGGGGTCTG 59.095 52.381 0.00 0.00 35.98 3.51
110 111 1.905215 CACTCTGTTCATGAGGGGTCT 59.095 52.381 0.00 0.00 35.98 3.85
111 112 1.065854 CCACTCTGTTCATGAGGGGTC 60.066 57.143 4.02 0.00 46.95 4.46
112 113 0.987294 CCACTCTGTTCATGAGGGGT 59.013 55.000 4.02 0.00 46.95 4.95
114 115 3.981071 TTACCACTCTGTTCATGAGGG 57.019 47.619 0.00 0.00 35.98 4.30
115 116 6.615088 CAAAATTACCACTCTGTTCATGAGG 58.385 40.000 0.00 0.00 35.98 3.86
116 117 6.088824 GCAAAATTACCACTCTGTTCATGAG 58.911 40.000 0.00 0.00 37.55 2.90
117 118 5.048083 GGCAAAATTACCACTCTGTTCATGA 60.048 40.000 0.00 0.00 0.00 3.07
118 119 5.163513 GGCAAAATTACCACTCTGTTCATG 58.836 41.667 0.00 0.00 0.00 3.07
119 120 4.220602 GGGCAAAATTACCACTCTGTTCAT 59.779 41.667 0.00 0.00 0.00 2.57
120 121 3.572255 GGGCAAAATTACCACTCTGTTCA 59.428 43.478 0.00 0.00 0.00 3.18
121 122 3.365969 CGGGCAAAATTACCACTCTGTTC 60.366 47.826 0.00 0.00 0.00 3.18
122 123 2.556622 CGGGCAAAATTACCACTCTGTT 59.443 45.455 0.00 0.00 0.00 3.16
123 124 2.159382 CGGGCAAAATTACCACTCTGT 58.841 47.619 0.00 0.00 0.00 3.41
124 125 1.135402 GCGGGCAAAATTACCACTCTG 60.135 52.381 0.00 0.00 0.00 3.35
125 126 1.173913 GCGGGCAAAATTACCACTCT 58.826 50.000 0.00 0.00 0.00 3.24
126 127 0.179174 CGCGGGCAAAATTACCACTC 60.179 55.000 0.00 0.00 0.00 3.51
127 128 0.891904 ACGCGGGCAAAATTACCACT 60.892 50.000 12.47 0.00 0.00 4.00
128 129 0.731174 CACGCGGGCAAAATTACCAC 60.731 55.000 12.47 0.00 0.00 4.16
129 130 1.581954 CACGCGGGCAAAATTACCA 59.418 52.632 12.47 0.00 0.00 3.25
130 131 1.803922 GCACGCGGGCAAAATTACC 60.804 57.895 31.74 0.00 0.00 2.85
131 132 2.149599 CGCACGCGGGCAAAATTAC 61.150 57.895 34.98 0.27 35.56 1.89
132 133 1.296755 TACGCACGCGGGCAAAATTA 61.297 50.000 34.98 12.68 44.69 1.40
133 134 1.928706 ATACGCACGCGGGCAAAATT 61.929 50.000 34.98 13.77 44.69 1.82
134 135 2.403378 ATACGCACGCGGGCAAAAT 61.403 52.632 34.98 19.88 44.69 1.82
135 136 3.050876 ATACGCACGCGGGCAAAA 61.051 55.556 34.98 18.33 44.69 2.44
136 137 3.794242 CATACGCACGCGGGCAAA 61.794 61.111 34.98 21.24 44.69 3.68
137 138 3.644399 TACATACGCACGCGGGCAA 62.644 57.895 34.98 21.67 44.69 4.52
138 139 4.131088 TACATACGCACGCGGGCA 62.131 61.111 34.98 16.28 44.69 5.36
139 140 3.623330 GTACATACGCACGCGGGC 61.623 66.667 26.66 26.66 44.69 6.13
140 141 3.317036 CGTACATACGCACGCGGG 61.317 66.667 16.70 7.92 43.14 6.13
151 152 3.181511 GCATGCACACATTGTACGTACAT 60.182 43.478 27.82 15.42 35.89 2.29
157 158 1.069296 ACGTGCATGCACACATTGTAC 60.069 47.619 40.95 18.33 46.47 2.90
209 211 3.860930 TTTCTTGCCACCCCTCGCC 62.861 63.158 0.00 0.00 0.00 5.54
339 358 1.538687 GGACTGCCCAATGCTTTGCT 61.539 55.000 6.81 0.00 42.00 3.91
340 359 1.079612 GGACTGCCCAATGCTTTGC 60.080 57.895 6.81 0.00 42.00 3.68
341 360 1.747355 CTAGGACTGCCCAATGCTTTG 59.253 52.381 5.37 5.37 42.00 2.77
342 361 1.341383 CCTAGGACTGCCCAATGCTTT 60.341 52.381 1.05 0.00 42.00 3.51
343 362 0.257039 CCTAGGACTGCCCAATGCTT 59.743 55.000 1.05 0.00 42.00 3.91
368 387 2.554893 AGGAGTATAGCTCGCTTGCTAC 59.445 50.000 9.22 2.13 46.60 3.58
478 506 3.660111 GCGTTGGGAGGTGTGTGC 61.660 66.667 0.00 0.00 0.00 4.57
479 507 2.978010 GGCGTTGGGAGGTGTGTG 60.978 66.667 0.00 0.00 0.00 3.82
480 508 3.168528 AGGCGTTGGGAGGTGTGT 61.169 61.111 0.00 0.00 0.00 3.72
563 603 1.342076 TGCAGGTGTAGGACTAGGAGG 60.342 57.143 0.00 0.00 0.00 4.30
565 605 1.618888 GGTGCAGGTGTAGGACTAGGA 60.619 57.143 0.00 0.00 0.00 2.94
587 1035 4.390556 AGCGGAGGAGGAGCAGGT 62.391 66.667 0.00 0.00 0.00 4.00
600 1048 1.869754 CGAGAGAGAGAGAGAGAGCGG 60.870 61.905 0.00 0.00 0.00 5.52
601 1049 1.491670 CGAGAGAGAGAGAGAGAGCG 58.508 60.000 0.00 0.00 0.00 5.03
602 1050 1.412710 TCCGAGAGAGAGAGAGAGAGC 59.587 57.143 0.00 0.00 0.00 4.09
603 1051 2.430694 TGTCCGAGAGAGAGAGAGAGAG 59.569 54.545 0.00 0.00 0.00 3.20
604 1052 2.462723 TGTCCGAGAGAGAGAGAGAGA 58.537 52.381 0.00 0.00 0.00 3.10
605 1053 2.979814 TGTCCGAGAGAGAGAGAGAG 57.020 55.000 0.00 0.00 0.00 3.20
606 1054 2.093181 CCTTGTCCGAGAGAGAGAGAGA 60.093 54.545 0.00 0.00 0.00 3.10
607 1055 2.093181 TCCTTGTCCGAGAGAGAGAGAG 60.093 54.545 0.00 0.00 0.00 3.20
608 1056 1.909986 TCCTTGTCCGAGAGAGAGAGA 59.090 52.381 0.00 0.00 0.00 3.10
624 1072 1.600916 GGGAGCAGTGCGTTTCCTT 60.601 57.895 18.41 0.00 0.00 3.36
660 1108 2.019948 TGATCTGATCACTGTGCTGC 57.980 50.000 16.06 0.00 33.59 5.25
663 1111 6.649557 TGAATGATATGATCTGATCACTGTGC 59.350 38.462 21.71 10.63 43.01 4.57
678 1126 5.123502 GTGCAAGAGGGCTATGAATGATATG 59.876 44.000 0.00 0.00 34.04 1.78
680 1128 4.505566 GGTGCAAGAGGGCTATGAATGATA 60.506 45.833 0.00 0.00 34.04 2.15
681 1129 3.484407 GTGCAAGAGGGCTATGAATGAT 58.516 45.455 0.00 0.00 34.04 2.45
682 1130 2.421952 GGTGCAAGAGGGCTATGAATGA 60.422 50.000 0.00 0.00 34.04 2.57
683 1131 1.952296 GGTGCAAGAGGGCTATGAATG 59.048 52.381 0.00 0.00 34.04 2.67
684 1132 1.565759 TGGTGCAAGAGGGCTATGAAT 59.434 47.619 0.00 0.00 34.04 2.57
685 1133 0.991146 TGGTGCAAGAGGGCTATGAA 59.009 50.000 0.00 0.00 34.04 2.57
686 1134 0.253044 GTGGTGCAAGAGGGCTATGA 59.747 55.000 0.00 0.00 34.04 2.15
687 1135 1.091771 CGTGGTGCAAGAGGGCTATG 61.092 60.000 0.00 0.00 34.04 2.23
688 1136 1.221840 CGTGGTGCAAGAGGGCTAT 59.778 57.895 0.00 0.00 34.04 2.97
689 1137 2.662596 CGTGGTGCAAGAGGGCTA 59.337 61.111 0.00 0.00 34.04 3.93
714 1162 4.423209 GGCAGGGAGGGAGGGAGT 62.423 72.222 0.00 0.00 0.00 3.85
732 1180 1.957695 GGGCACAAAAAGCAGCTGC 60.958 57.895 31.53 31.53 42.49 5.25
733 1181 1.301165 GGGGCACAAAAAGCAGCTG 60.301 57.895 10.11 10.11 0.00 4.24
734 1182 1.458209 AGGGGCACAAAAAGCAGCT 60.458 52.632 0.00 0.00 0.00 4.24
735 1183 1.005748 GAGGGGCACAAAAAGCAGC 60.006 57.895 0.00 0.00 0.00 5.25
736 1184 1.667722 GGAGGGGCACAAAAAGCAG 59.332 57.895 0.00 0.00 0.00 4.24
737 1185 1.836604 GGGAGGGGCACAAAAAGCA 60.837 57.895 0.00 0.00 0.00 3.91
738 1186 2.583441 GGGGAGGGGCACAAAAAGC 61.583 63.158 0.00 0.00 0.00 3.51
739 1187 1.156095 AGGGGAGGGGCACAAAAAG 59.844 57.895 0.00 0.00 0.00 2.27
740 1188 1.152355 CAGGGGAGGGGCACAAAAA 60.152 57.895 0.00 0.00 0.00 1.94
741 1189 2.525592 CAGGGGAGGGGCACAAAA 59.474 61.111 0.00 0.00 0.00 2.44
742 1190 4.299796 GCAGGGGAGGGGCACAAA 62.300 66.667 0.00 0.00 0.00 2.83
800 1258 1.330829 GGAAATTAAAGAGCGAGGCGG 59.669 52.381 0.00 0.00 0.00 6.13
839 1302 1.143684 AGCAGGCTTGGTGAAGAAGAA 59.856 47.619 0.00 0.00 32.86 2.52
869 1332 2.631062 TCAAGTAAGACAAGGGCGAAGA 59.369 45.455 0.00 0.00 0.00 2.87
870 1333 2.737252 GTCAAGTAAGACAAGGGCGAAG 59.263 50.000 0.00 0.00 38.40 3.79
871 1334 2.103432 TGTCAAGTAAGACAAGGGCGAA 59.897 45.455 0.00 0.00 44.92 4.70
872 1335 1.689813 TGTCAAGTAAGACAAGGGCGA 59.310 47.619 0.00 0.00 44.92 5.54
873 1336 2.163818 TGTCAAGTAAGACAAGGGCG 57.836 50.000 0.00 0.00 44.92 6.13
885 1353 3.188460 GTGTGTTTGTCTGTGTGTCAAGT 59.812 43.478 0.00 0.00 0.00 3.16
886 1354 3.426159 GGTGTGTTTGTCTGTGTGTCAAG 60.426 47.826 0.00 0.00 0.00 3.02
889 1357 1.062002 CGGTGTGTTTGTCTGTGTGTC 59.938 52.381 0.00 0.00 0.00 3.67
892 1360 1.365699 GACGGTGTGTTTGTCTGTGT 58.634 50.000 0.00 0.00 0.00 3.72
893 1361 0.300491 CGACGGTGTGTTTGTCTGTG 59.700 55.000 0.00 0.00 0.00 3.66
894 1362 1.426041 GCGACGGTGTGTTTGTCTGT 61.426 55.000 0.00 0.00 0.00 3.41
895 1363 1.275657 GCGACGGTGTGTTTGTCTG 59.724 57.895 0.00 0.00 0.00 3.51
897 1365 2.629763 GGCGACGGTGTGTTTGTC 59.370 61.111 0.00 0.00 0.00 3.18
898 1366 2.898343 GGGCGACGGTGTGTTTGT 60.898 61.111 0.00 0.00 0.00 2.83
899 1367 1.791103 AATGGGCGACGGTGTGTTTG 61.791 55.000 0.00 0.00 0.00 2.93
900 1368 1.104577 AAATGGGCGACGGTGTGTTT 61.105 50.000 0.00 0.00 0.00 2.83
901 1369 1.512156 GAAATGGGCGACGGTGTGTT 61.512 55.000 0.00 0.00 0.00 3.32
902 1370 1.964373 GAAATGGGCGACGGTGTGT 60.964 57.895 0.00 0.00 0.00 3.72
904 1372 2.359478 GGAAATGGGCGACGGTGT 60.359 61.111 0.00 0.00 0.00 4.16
906 1374 2.359478 GTGGAAATGGGCGACGGT 60.359 61.111 0.00 0.00 0.00 4.83
907 1375 1.674322 AAGTGGAAATGGGCGACGG 60.674 57.895 0.00 0.00 0.00 4.79
908 1376 0.953471 TCAAGTGGAAATGGGCGACG 60.953 55.000 0.00 0.00 0.00 5.12
909 1377 0.521735 GTCAAGTGGAAATGGGCGAC 59.478 55.000 0.00 0.00 0.00 5.19
910 1378 0.608035 GGTCAAGTGGAAATGGGCGA 60.608 55.000 0.00 0.00 0.00 5.54
911 1379 1.595093 GGGTCAAGTGGAAATGGGCG 61.595 60.000 0.00 0.00 0.00 6.13
912 1380 1.595093 CGGGTCAAGTGGAAATGGGC 61.595 60.000 0.00 0.00 0.00 5.36
913 1381 0.965363 CCGGGTCAAGTGGAAATGGG 60.965 60.000 0.00 0.00 0.00 4.00
914 1382 1.595093 GCCGGGTCAAGTGGAAATGG 61.595 60.000 2.18 0.00 0.00 3.16
915 1383 0.609131 AGCCGGGTCAAGTGGAAATG 60.609 55.000 0.00 0.00 0.00 2.32
916 1384 0.609131 CAGCCGGGTCAAGTGGAAAT 60.609 55.000 1.27 0.00 0.00 2.17
917 1385 1.228124 CAGCCGGGTCAAGTGGAAA 60.228 57.895 1.27 0.00 0.00 3.13
918 1386 2.429930 CAGCCGGGTCAAGTGGAA 59.570 61.111 1.27 0.00 0.00 3.53
922 1390 3.570212 AAGGCAGCCGGGTCAAGT 61.570 61.111 1.27 0.00 0.00 3.16
944 1412 1.524008 CCAAGAAACTGAACGGGGCC 61.524 60.000 0.00 0.00 0.00 5.80
945 1413 0.822121 ACCAAGAAACTGAACGGGGC 60.822 55.000 0.00 0.00 0.00 5.80
946 1414 1.607148 GAACCAAGAAACTGAACGGGG 59.393 52.381 0.00 0.00 0.00 5.73
948 1416 1.263217 CGGAACCAAGAAACTGAACGG 59.737 52.381 0.00 0.00 0.00 4.44
950 1418 1.673920 TGCGGAACCAAGAAACTGAAC 59.326 47.619 0.00 0.00 0.00 3.18
951 1419 2.045561 TGCGGAACCAAGAAACTGAA 57.954 45.000 0.00 0.00 0.00 3.02
952 1420 2.270352 ATGCGGAACCAAGAAACTGA 57.730 45.000 0.00 0.00 0.00 3.41
953 1421 2.664916 CAATGCGGAACCAAGAAACTG 58.335 47.619 0.00 0.00 0.00 3.16
954 1422 1.000274 GCAATGCGGAACCAAGAAACT 60.000 47.619 0.00 0.00 0.00 2.66
992 1460 4.018609 CGGTGATCATGTCCGCTC 57.981 61.111 9.97 0.00 37.90 5.03
1671 2142 3.573772 CTGCGAGTGGGAGTGCGAA 62.574 63.158 0.00 0.00 0.00 4.70
1704 2175 2.283529 GCCGGAGAGGTTGGAGACA 61.284 63.158 5.05 0.00 43.70 3.41
2050 2531 7.792508 CGAAAACAAACAAACTGCTAGTAGTAG 59.207 37.037 14.28 13.18 33.91 2.57
2398 2883 3.325716 ACAACGGTGTTTACCTGTAGGAT 59.674 43.478 0.00 0.00 45.22 3.24
2428 2920 7.010367 TCACTGATGAACAAACAATTTGCTTTC 59.990 33.333 1.23 0.62 44.39 2.62
2432 2924 5.750067 AGTCACTGATGAACAAACAATTTGC 59.250 36.000 1.23 0.00 44.39 3.68
2436 2931 6.095300 TGTTGAGTCACTGATGAACAAACAAT 59.905 34.615 0.00 0.00 36.31 2.71
2458 2953 8.582437 ACAAGATCAATCAACAGATCAAATGTT 58.418 29.630 0.00 0.00 42.36 2.71
2471 2966 5.970317 ATGCAGTTCACAAGATCAATCAA 57.030 34.783 0.00 0.00 0.00 2.57
2596 3091 2.824952 CAGAGTCAGAGCTGTGCAC 58.175 57.895 10.75 10.75 0.00 4.57
2730 3225 3.190849 CCTCACAGCCATCGCGTG 61.191 66.667 5.77 3.64 41.18 5.34
2875 3370 8.521176 GGTCACTACATTTTCTCTAGTTGAGTA 58.479 37.037 1.45 0.00 43.13 2.59
2881 3386 9.201989 TCATATGGTCACTACATTTTCTCTAGT 57.798 33.333 2.13 0.00 0.00 2.57
2943 3448 1.683790 CGAACACGAAGGGCACGATC 61.684 60.000 0.00 0.00 34.70 3.69
3108 3613 1.684983 GTGGATGATGCCCTCCAATTG 59.315 52.381 0.00 0.00 42.99 2.32
3117 3626 2.093288 TCTGACTTGAGTGGATGATGCC 60.093 50.000 0.00 0.00 0.00 4.40
3188 3697 1.066002 GGAATCAATGGTGCACGATGG 59.934 52.381 15.55 12.60 0.00 3.51
3275 3792 2.827800 TCATGCGAGGAATCAGGATC 57.172 50.000 0.00 0.00 0.00 3.36
3276 3793 2.636403 TCATCATGCGAGGAATCAGGAT 59.364 45.455 0.00 0.00 34.52 3.24
3278 3795 2.538512 TCATCATGCGAGGAATCAGG 57.461 50.000 0.00 0.00 0.00 3.86
3288 3971 2.287103 CACAGAGTTCCATCATCATGCG 59.713 50.000 0.00 0.00 0.00 4.73
3289 3972 3.276857 ACACAGAGTTCCATCATCATGC 58.723 45.455 0.00 0.00 0.00 4.06
3309 3992 2.778659 GAAGATCACGCTGCATCAAAC 58.221 47.619 0.00 0.00 0.00 2.93
3371 4054 2.045536 GTTCAGAGGCCCAGCAGG 60.046 66.667 0.00 0.00 39.47 4.85
3438 4160 3.369546 ACCAAGCAAAAGGAAACGATG 57.630 42.857 0.00 0.00 0.00 3.84
3457 4185 4.878397 CAGTCTAATCTGGGATCAACCAAC 59.122 45.833 0.00 0.00 40.68 3.77
3478 4206 6.314896 ACCTACGTTTACTACTAGTACTGCAG 59.685 42.308 13.48 13.48 28.93 4.41
3557 4320 7.592439 AATTAGCCAGACTTAACGTTAGTTC 57.408 36.000 8.23 8.83 41.49 3.01
3596 4359 9.554724 GAGTTACAAATCTCGATGATAGATCTC 57.445 37.037 0.00 0.00 32.48 2.75
3608 4371 6.448053 TGAACGAAAGAGTTACAAATCTCG 57.552 37.500 0.00 0.00 31.24 4.04
3630 4393 7.786178 TGAAGGAAATTCCATACGATAGTTG 57.214 36.000 15.21 0.00 44.11 3.16
3631 4394 7.011109 CGTTGAAGGAAATTCCATACGATAGTT 59.989 37.037 15.21 0.00 44.11 2.24
3656 4430 9.773328 ACTACAATGAATGAATTTCACATAACG 57.227 29.630 0.15 0.00 46.80 3.18
3681 4455 8.264632 CACTTGAAGTAGTACAAACGAAACTAC 58.735 37.037 0.00 4.15 43.79 2.73
3683 4457 6.815142 ACACTTGAAGTAGTACAAACGAAACT 59.185 34.615 0.00 0.00 0.00 2.66
3684 4458 6.997222 ACACTTGAAGTAGTACAAACGAAAC 58.003 36.000 0.00 0.00 0.00 2.78
3685 4459 7.599630 AACACTTGAAGTAGTACAAACGAAA 57.400 32.000 0.00 0.00 0.00 3.46
3687 4461 6.591062 ACAAACACTTGAAGTAGTACAAACGA 59.409 34.615 0.00 0.00 36.33 3.85
3689 4463 8.959734 AAACAAACACTTGAAGTAGTACAAAC 57.040 30.769 0.00 0.00 36.33 2.93
3691 4465 8.238631 GGAAAACAAACACTTGAAGTAGTACAA 58.761 33.333 0.00 0.00 36.33 2.41
3692 4466 7.148205 GGGAAAACAAACACTTGAAGTAGTACA 60.148 37.037 0.00 0.00 36.33 2.90
3693 4467 7.066645 AGGGAAAACAAACACTTGAAGTAGTAC 59.933 37.037 0.00 0.00 36.33 2.73
3694 4468 7.114095 AGGGAAAACAAACACTTGAAGTAGTA 58.886 34.615 0.00 0.00 36.33 1.82
3695 4469 5.949952 AGGGAAAACAAACACTTGAAGTAGT 59.050 36.000 0.00 0.00 36.33 2.73
3696 4470 6.451064 AGGGAAAACAAACACTTGAAGTAG 57.549 37.500 0.00 0.00 36.33 2.57
3698 4472 5.621329 CGAAGGGAAAACAAACACTTGAAGT 60.621 40.000 0.00 0.00 36.33 3.01
3699 4473 4.798387 CGAAGGGAAAACAAACACTTGAAG 59.202 41.667 0.00 0.00 36.33 3.02
3700 4474 4.459685 TCGAAGGGAAAACAAACACTTGAA 59.540 37.500 0.00 0.00 36.33 2.69
3701 4475 4.011023 TCGAAGGGAAAACAAACACTTGA 58.989 39.130 0.00 0.00 36.33 3.02
3702 4476 4.364415 TCGAAGGGAAAACAAACACTTG 57.636 40.909 0.00 0.00 38.61 3.16
3703 4477 4.401202 ACATCGAAGGGAAAACAAACACTT 59.599 37.500 0.00 0.00 32.11 3.16
3704 4478 3.951680 ACATCGAAGGGAAAACAAACACT 59.048 39.130 0.00 0.00 0.00 3.55
3705 4479 4.301637 ACATCGAAGGGAAAACAAACAC 57.698 40.909 0.00 0.00 0.00 3.32
3706 4480 4.202070 GGAACATCGAAGGGAAAACAAACA 60.202 41.667 0.00 0.00 0.00 2.83
3707 4481 4.295870 GGAACATCGAAGGGAAAACAAAC 58.704 43.478 0.00 0.00 0.00 2.93
3738 4512 7.602644 GCACAAAATATTCTCCGATCTATACCA 59.397 37.037 0.00 0.00 0.00 3.25
3739 4513 7.819900 AGCACAAAATATTCTCCGATCTATACC 59.180 37.037 0.00 0.00 0.00 2.73
3740 4514 8.764524 AGCACAAAATATTCTCCGATCTATAC 57.235 34.615 0.00 0.00 0.00 1.47
3741 4515 9.778741 AAAGCACAAAATATTCTCCGATCTATA 57.221 29.630 0.00 0.00 0.00 1.31
3742 4516 8.682936 AAAGCACAAAATATTCTCCGATCTAT 57.317 30.769 0.00 0.00 0.00 1.98
3743 4517 7.768582 TGAAAGCACAAAATATTCTCCGATCTA 59.231 33.333 0.00 0.00 0.00 1.98
3744 4518 6.599244 TGAAAGCACAAAATATTCTCCGATCT 59.401 34.615 0.00 0.00 0.00 2.75
3745 4519 6.785191 TGAAAGCACAAAATATTCTCCGATC 58.215 36.000 0.00 0.00 0.00 3.69
3746 4520 6.757897 TGAAAGCACAAAATATTCTCCGAT 57.242 33.333 0.00 0.00 0.00 4.18
3747 4521 6.374053 TCATGAAAGCACAAAATATTCTCCGA 59.626 34.615 0.00 0.00 0.00 4.55
3748 4522 6.554419 TCATGAAAGCACAAAATATTCTCCG 58.446 36.000 0.00 0.00 0.00 4.63
3749 4523 7.490402 CCTTCATGAAAGCACAAAATATTCTCC 59.510 37.037 9.88 0.00 33.29 3.71
3756 4530 6.018832 CGTTTTCCTTCATGAAAGCACAAAAT 60.019 34.615 9.88 0.00 35.82 1.82
3775 4549 5.574815 AACAATAAAGCATGCACGTTTTC 57.425 34.783 21.98 0.00 0.00 2.29
3788 4562 8.859517 TTGTTCCCGTAAAGAAAACAATAAAG 57.140 30.769 0.00 0.00 35.54 1.85
3805 4579 0.872388 GCTACACACCTTTGTTCCCG 59.128 55.000 0.00 0.00 31.66 5.14
3841 4616 2.106684 GAGAACAAAAGACCAGTCCCCT 59.893 50.000 0.00 0.00 0.00 4.79
3842 4617 2.106684 AGAGAACAAAAGACCAGTCCCC 59.893 50.000 0.00 0.00 0.00 4.81
3843 4618 3.493767 AGAGAACAAAAGACCAGTCCC 57.506 47.619 0.00 0.00 0.00 4.46
3844 4619 3.815962 GGAAGAGAACAAAAGACCAGTCC 59.184 47.826 0.00 0.00 0.00 3.85
3845 4620 3.495001 CGGAAGAGAACAAAAGACCAGTC 59.505 47.826 0.00 0.00 0.00 3.51
3846 4621 3.467803 CGGAAGAGAACAAAAGACCAGT 58.532 45.455 0.00 0.00 0.00 4.00
3847 4622 2.224314 GCGGAAGAGAACAAAAGACCAG 59.776 50.000 0.00 0.00 0.00 4.00
3868 4653 5.938279 TGTACTCCCTCTATACTACCACAG 58.062 45.833 0.00 0.00 0.00 3.66
3875 4660 8.258708 GTCAATGTTTTGTACTCCCTCTATACT 58.741 37.037 0.00 0.00 34.32 2.12
3879 4664 5.280317 GGGTCAATGTTTTGTACTCCCTCTA 60.280 44.000 0.00 0.00 34.32 2.43
3880 4665 4.506802 GGGTCAATGTTTTGTACTCCCTCT 60.507 45.833 0.00 0.00 34.32 3.69
3881 4666 3.756963 GGGTCAATGTTTTGTACTCCCTC 59.243 47.826 0.00 0.00 34.32 4.30
3882 4667 3.763057 GGGTCAATGTTTTGTACTCCCT 58.237 45.455 0.00 0.00 34.32 4.20
3883 4668 2.486592 CGGGTCAATGTTTTGTACTCCC 59.513 50.000 0.00 0.00 34.32 4.30
3884 4669 3.404899 TCGGGTCAATGTTTTGTACTCC 58.595 45.455 0.00 0.00 34.32 3.85
3885 4670 4.612939 GCTTCGGGTCAATGTTTTGTACTC 60.613 45.833 0.00 0.00 34.32 2.59
3886 4671 3.252458 GCTTCGGGTCAATGTTTTGTACT 59.748 43.478 0.00 0.00 34.32 2.73
3887 4672 3.003897 TGCTTCGGGTCAATGTTTTGTAC 59.996 43.478 0.00 0.00 34.32 2.90
3888 4673 3.003897 GTGCTTCGGGTCAATGTTTTGTA 59.996 43.478 0.00 0.00 34.32 2.41
3889 4674 2.028130 TGCTTCGGGTCAATGTTTTGT 58.972 42.857 0.00 0.00 34.32 2.83
3910 4695 0.324943 ACACCACCATCTCCTTTCCG 59.675 55.000 0.00 0.00 0.00 4.30
3931 4718 2.125326 CATGGATGCACTGGCTGGG 61.125 63.158 0.00 0.00 41.91 4.45
3953 4740 4.081406 TCTTCACCCATTGATTTCCACTG 58.919 43.478 0.00 0.00 32.84 3.66
3980 4772 1.676529 CGACTCGTACACCATCATCCT 59.323 52.381 0.00 0.00 0.00 3.24
3993 4785 2.049433 CGCCTTTGTCCGACTCGT 60.049 61.111 0.00 0.00 0.00 4.18
3994 4786 1.663702 AACGCCTTTGTCCGACTCG 60.664 57.895 0.00 0.00 0.00 4.18
3995 4787 1.566018 CCAACGCCTTTGTCCGACTC 61.566 60.000 0.00 0.00 32.71 3.36
3996 4788 1.597027 CCAACGCCTTTGTCCGACT 60.597 57.895 0.00 0.00 32.71 4.18
3997 4789 2.943653 CCAACGCCTTTGTCCGAC 59.056 61.111 0.00 0.00 32.71 4.79
3998 4790 2.102109 TAGCCAACGCCTTTGTCCGA 62.102 55.000 0.00 0.00 32.71 4.55
3999 4791 1.024579 ATAGCCAACGCCTTTGTCCG 61.025 55.000 0.00 0.00 32.71 4.79
4000 4792 0.733150 GATAGCCAACGCCTTTGTCC 59.267 55.000 0.00 0.00 32.71 4.02
4002 4794 1.279271 AGAGATAGCCAACGCCTTTGT 59.721 47.619 0.00 0.00 32.71 2.83
4003 4795 2.029838 AGAGATAGCCAACGCCTTTG 57.970 50.000 0.00 0.00 34.57 2.77
4007 4801 1.134670 ACTCAAGAGATAGCCAACGCC 60.135 52.381 3.73 0.00 34.57 5.68
4017 4811 3.201290 CGCATGCCTAAACTCAAGAGAT 58.799 45.455 13.15 0.00 0.00 2.75
4053 4852 3.633525 GGGCATCATTTCACTAGATTGCA 59.366 43.478 0.00 0.00 0.00 4.08
4057 4856 5.709164 GCAATAGGGCATCATTTCACTAGAT 59.291 40.000 0.00 0.00 0.00 1.98
4058 4857 5.065914 GCAATAGGGCATCATTTCACTAGA 58.934 41.667 0.00 0.00 0.00 2.43
4074 4880 1.455383 GCGTGGAATGGGGCAATAGG 61.455 60.000 0.00 0.00 0.00 2.57
4076 4882 0.323816 TTGCGTGGAATGGGGCAATA 60.324 50.000 0.00 0.00 40.17 1.90
4080 4886 2.495866 CATTGCGTGGAATGGGGC 59.504 61.111 6.23 0.00 30.82 5.80
4089 4895 2.813754 CCCAAGGATATACCATTGCGTG 59.186 50.000 0.00 0.00 42.04 5.34
4090 4896 2.708861 TCCCAAGGATATACCATTGCGT 59.291 45.455 0.00 0.00 42.04 5.24
4091 4897 3.074412 GTCCCAAGGATATACCATTGCG 58.926 50.000 0.00 0.00 42.04 4.85
4092 4898 3.074412 CGTCCCAAGGATATACCATTGC 58.926 50.000 0.00 0.00 42.04 3.56
4093 4899 4.351874 ACGTCCCAAGGATATACCATTG 57.648 45.455 0.00 0.00 42.04 2.82
4094 4900 5.011738 CACTACGTCCCAAGGATATACCATT 59.988 44.000 0.00 0.00 42.04 3.16
4095 4901 4.527038 CACTACGTCCCAAGGATATACCAT 59.473 45.833 0.00 0.00 42.04 3.55
4096 4902 3.893200 CACTACGTCCCAAGGATATACCA 59.107 47.826 0.00 0.00 42.04 3.25
4097 4903 3.893813 ACACTACGTCCCAAGGATATACC 59.106 47.826 0.00 0.00 32.73 2.73
4098 4904 5.118642 GACACTACGTCCCAAGGATATAC 57.881 47.826 0.00 0.00 38.85 1.47
4110 4916 0.957395 TCCCTCACGGACACTACGTC 60.957 60.000 0.00 0.00 43.58 4.34
4111 4917 1.073722 TCCCTCACGGACACTACGT 59.926 57.895 0.00 0.00 46.82 3.57
4112 4918 3.991999 TCCCTCACGGACACTACG 58.008 61.111 0.00 0.00 34.86 3.51
4119 4925 1.430992 AAAGAAAGGTCCCTCACGGA 58.569 50.000 0.00 0.00 38.83 4.69
4122 4928 4.645136 AGTTCAAAAAGAAAGGTCCCTCAC 59.355 41.667 0.00 0.00 38.13 3.51
4135 4941 5.748630 GTGTGCCCTTTCTAAGTTCAAAAAG 59.251 40.000 0.00 0.00 0.00 2.27
4162 4969 4.216902 ACGTTTGCTGGTTATAAAAGTCCC 59.783 41.667 0.00 0.00 0.00 4.46
4199 5006 5.422363 TGCCATGCATTCGATCTCGATCT 62.422 47.826 0.00 0.00 40.14 2.75
4204 5011 3.637998 AATTGCCATGCATTCGATCTC 57.362 42.857 0.00 0.00 38.76 2.75
4213 5020 7.386299 ACGTAATTTCTTAAAAATTGCCATGCA 59.614 29.630 13.80 0.00 36.47 3.96
4272 5079 8.002107 CGTACGAAAGCGAAAATTGTCATATAT 58.998 33.333 10.44 0.00 41.64 0.86
4273 5080 7.009448 ACGTACGAAAGCGAAAATTGTCATATA 59.991 33.333 24.41 0.00 41.64 0.86
4281 5088 2.663606 GCCACGTACGAAAGCGAAAATT 60.664 45.455 24.41 0.00 41.64 1.82
4289 5096 0.788391 GGACTTGCCACGTACGAAAG 59.212 55.000 24.41 19.60 36.34 2.62
4294 5101 2.758009 TGTAAAGGACTTGCCACGTAC 58.242 47.619 0.00 0.00 40.02 3.67
4298 5105 1.265905 CCGTTGTAAAGGACTTGCCAC 59.734 52.381 0.00 0.00 40.02 5.01
4316 5123 2.034879 ATCTGAACTTGCCACGCCG 61.035 57.895 0.00 0.00 0.00 6.46
4333 5140 4.933400 GCAAGATTTCTCATGCCAAAACAT 59.067 37.500 0.00 0.00 39.59 2.71
4367 5174 0.666374 CGTTCGCTGGGAAGGTTTTT 59.334 50.000 16.15 0.00 36.13 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.