Multiple sequence alignment - TraesCS4B01G128900
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BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS4B01G128900
chr4B
100.000
2471
0
0
1
2471
168579216
168576746
0.000000e+00
4564
1
TraesCS4B01G128900
chr4B
92.000
125
10
0
1789
1913
168192721
168192597
2.530000e-40
176
2
TraesCS4B01G128900
chr4D
92.971
1565
82
16
135
1683
108044181
108045733
0.000000e+00
2255
3
TraesCS4B01G128900
chr4D
92.881
604
35
2
1875
2471
108045747
108046349
0.000000e+00
870
4
TraesCS4B01G128900
chr4D
83.969
393
50
6
1993
2377
397155701
397156088
5.020000e-97
364
5
TraesCS4B01G128900
chr4D
83.947
380
45
11
1993
2363
95174726
95175098
1.410000e-92
350
6
TraesCS4B01G128900
chr4D
87.864
206
25
0
1054
1259
108182900
108183105
2.460000e-60
243
7
TraesCS4B01G128900
chr4D
89.333
150
15
1
1791
1939
108214928
108215077
1.170000e-43
187
8
TraesCS4B01G128900
chr4D
89.286
140
14
1
1
139
108042095
108042234
9.080000e-40
174
9
TraesCS4B01G128900
chr4A
89.381
1535
101
26
50
1559
468215642
468214145
0.000000e+00
1875
10
TraesCS4B01G128900
chr4A
95.283
212
10
0
1562
1773
468214037
468213826
1.090000e-88
337
11
TraesCS4B01G128900
chr4A
90.455
220
11
3
1785
1994
468213756
468213537
5.200000e-72
281
12
TraesCS4B01G128900
chr4A
86.885
183
24
0
2195
2377
468213529
468213347
3.220000e-49
206
13
TraesCS4B01G128900
chr2D
81.934
393
58
7
1992
2377
53759536
53759150
1.100000e-83
320
14
TraesCS4B01G128900
chr2D
82.254
355
49
7
1993
2339
435208473
435208821
6.680000e-76
294
15
TraesCS4B01G128900
chr5D
81.726
394
43
14
1992
2377
537651907
537651535
3.990000e-78
302
16
TraesCS4B01G128900
chr7D
81.199
367
54
8
2029
2386
264772999
264773359
5.200000e-72
281
17
TraesCS4B01G128900
chr2B
83.094
278
38
5
2013
2282
797437423
797437147
6.830000e-61
244
18
TraesCS4B01G128900
chrUn
84.746
236
27
6
2009
2235
12190646
12190411
6.870000e-56
228
19
TraesCS4B01G128900
chr1D
78.475
223
46
2
2153
2374
5265585
5265806
7.120000e-31
145
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS4B01G128900
chr4B
168576746
168579216
2470
True
4564.000000
4564
100.000000
1
2471
1
chr4B.!!$R2
2470
1
TraesCS4B01G128900
chr4D
108042095
108046349
4254
False
1099.666667
2255
91.712667
1
2471
3
chr4D.!!$F5
2470
2
TraesCS4B01G128900
chr4A
468213347
468215642
2295
True
674.750000
1875
90.501000
50
2377
4
chr4A.!!$R1
2327
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
31
32
0.177604
CTAGGCTCCAAGGAGTGCAG
59.822
60.0
16.94
7.97
43.7
4.41
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1737
3825
0.110509
GCTGTGATGTGCGTGAGTTG
60.111
55.0
0.0
0.0
0.0
3.16
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
19
20
2.257067
GATCTCCGCGCTAGGCTC
59.743
66.667
5.56
0.57
40.44
4.70
24
25
4.899239
CCGCGCTAGGCTCCAAGG
62.899
72.222
5.56
0.00
40.44
3.61
28
29
1.142748
CGCTAGGCTCCAAGGAGTG
59.857
63.158
16.94
6.99
43.70
3.51
31
32
0.177604
CTAGGCTCCAAGGAGTGCAG
59.822
60.000
16.94
7.97
43.70
4.41
48
50
1.272769
GCAGGTATCTATGGACGGGAC
59.727
57.143
0.00
0.00
0.00
4.46
90
92
2.989253
TCGGGCTGCTTCTCGACA
60.989
61.111
0.00
0.00
0.00
4.35
91
93
2.048222
CGGGCTGCTTCTCGACAA
60.048
61.111
0.00
0.00
0.00
3.18
111
113
6.462949
CGACAAGATCGCTTTACAAAGAAATC
59.537
38.462
5.89
7.12
45.52
2.17
206
2159
0.179043
TGGCAAGTTGCTCGTAACCA
60.179
50.000
26.16
11.71
44.28
3.67
211
2171
1.710013
AGTTGCTCGTAACCACATCG
58.290
50.000
0.00
0.00
0.00
3.84
222
2182
1.320344
ACCACATCGCTAGCGGAGAA
61.320
55.000
34.76
17.81
40.25
2.87
272
2233
1.133869
GAATTACGTGTGGTGCGGC
59.866
57.895
0.00
0.00
0.00
6.53
286
2247
4.662961
CGGCGCGGCATAGGATCA
62.663
66.667
32.60
0.00
0.00
2.92
288
2249
2.029666
GCGCGGCATAGGATCACT
59.970
61.111
8.83
0.00
0.00
3.41
293
2254
1.276421
GCGGCATAGGATCACTACCAT
59.724
52.381
0.00
0.00
33.70
3.55
305
2266
8.511604
AGGATCACTACCATTTTATTGTTCAG
57.488
34.615
0.00
0.00
0.00
3.02
327
2288
3.246226
GGTGTATAGTTGCTCGCTTCATG
59.754
47.826
0.00
0.00
0.00
3.07
351
2313
1.929494
AGCCCCTCCATGAAATAACCA
59.071
47.619
0.00
0.00
0.00
3.67
403
2365
5.590818
GGACCTATATAGGATGGTTCAGGA
58.409
45.833
31.53
0.00
46.63
3.86
407
2369
0.389391
ATAGGATGGTTCAGGACGCG
59.611
55.000
3.53
3.53
0.00
6.01
412
2374
4.047059
GGTTCAGGACGCGTCGGA
62.047
66.667
30.99
26.68
0.00
4.55
420
2383
4.789075
ACGCGTCGGATGGGAACG
62.789
66.667
19.64
7.25
0.00
3.95
422
2385
4.446413
GCGTCGGATGGGAACGGT
62.446
66.667
0.00
0.00
0.00
4.83
436
2399
1.836999
AACGGTGTCTGGCATGGCTA
61.837
55.000
21.08
5.79
0.00
3.93
442
2405
2.558359
GTGTCTGGCATGGCTAGTTTTT
59.442
45.455
21.08
0.00
38.31
1.94
444
2407
2.819608
GTCTGGCATGGCTAGTTTTTGA
59.180
45.455
21.08
3.32
38.31
2.69
471
2434
1.602237
CGTGGGCCTTGTGGACTAT
59.398
57.895
4.53
0.00
42.43
2.12
498
2464
3.686916
AGCGCTTATAGAGGGGATTTC
57.313
47.619
2.64
0.00
38.67
2.17
512
2478
3.837731
GGGGATTTCTTTTCACCATCCAA
59.162
43.478
0.00
0.00
36.62
3.53
534
2500
7.283127
TCCAACTGATCTTCTATACAAAATGGC
59.717
37.037
0.00
0.00
0.00
4.40
564
2536
5.996669
CTTTTGAAGCTTCTGGCAAAATT
57.003
34.783
26.09
0.00
44.79
1.82
587
2559
0.955919
GGACAAAGGAAGCGTGGAGG
60.956
60.000
0.00
0.00
0.00
4.30
627
2599
1.746760
GCAAAGTGCACTGAACTTCG
58.253
50.000
22.49
7.04
44.26
3.79
630
2602
1.583054
AAGTGCACTGAACTTCGTCC
58.417
50.000
22.49
0.00
32.36
4.79
651
2623
2.081462
CGTCGGGTAGGAATTTGCTTT
58.919
47.619
0.00
0.00
0.00
3.51
652
2624
3.264104
CGTCGGGTAGGAATTTGCTTTA
58.736
45.455
0.00
0.00
0.00
1.85
674
2646
2.124695
GGTGCCATCCTTCCCGAC
60.125
66.667
0.00
0.00
0.00
4.79
693
2665
1.821753
ACATCTTCTGGGAGTCGTCAG
59.178
52.381
5.94
5.94
0.00
3.51
705
2677
1.145803
GTCGTCAGTGTTAGTTGGCC
58.854
55.000
0.00
0.00
0.00
5.36
708
2680
1.540363
CGTCAGTGTTAGTTGGCCTGT
60.540
52.381
3.32
0.00
0.00
4.00
709
2681
2.288579
CGTCAGTGTTAGTTGGCCTGTA
60.289
50.000
3.32
0.00
0.00
2.74
711
2683
3.497262
GTCAGTGTTAGTTGGCCTGTAAC
59.503
47.826
3.32
9.70
0.00
2.50
716
2688
1.196104
TAGTTGGCCTGTAACCGGCT
61.196
55.000
3.32
0.00
46.73
5.52
723
2695
1.805945
CTGTAACCGGCTCTGCGTC
60.806
63.158
0.00
0.00
0.00
5.19
798
2772
8.883731
CGTTTCCATTTCATTAGACTCTTGTAT
58.116
33.333
0.00
0.00
0.00
2.29
813
2787
5.221843
ACTCTTGTATGACTTTGTAAGGCCA
60.222
40.000
5.01
0.00
34.86
5.36
815
2789
3.331150
TGTATGACTTTGTAAGGCCACG
58.669
45.455
5.01
0.00
34.86
4.94
827
2801
3.098555
GCCACGTCATTAAGGCCG
58.901
61.111
0.00
0.00
41.25
6.13
835
2809
2.051518
CATTAAGGCCGGGCAAGCA
61.052
57.895
31.59
11.32
0.00
3.91
843
2817
2.335712
CCGGGCAAGCACCTTCTTC
61.336
63.158
0.00
0.00
0.00
2.87
1199
3182
3.214123
CGCGTACCCGATCCTCCA
61.214
66.667
0.00
0.00
35.63
3.86
1608
3696
3.479006
CAGTTTACATCGCTTTGTTCCG
58.521
45.455
0.00
0.00
0.00
4.30
1691
3779
7.255104
GGAATTTCTTTTGAATTTGGGTGGAAC
60.255
37.037
0.00
0.00
38.37
3.62
1703
3791
1.669760
GTGGAACCCAATCGTGCGA
60.670
57.895
0.00
0.00
34.18
5.10
1737
3825
4.433615
TCACGGAGCAGAGACATATTTTC
58.566
43.478
0.00
0.00
0.00
2.29
1759
3847
1.632948
CTCACGCACATCACAGCAGG
61.633
60.000
0.00
0.00
0.00
4.85
1768
3856
3.663176
CACAGCAGGGCAACACCG
61.663
66.667
0.00
0.00
40.62
4.94
1773
3861
3.663176
CAGGGCAACACCGTGCTG
61.663
66.667
0.00
0.00
46.67
4.41
1774
3862
3.872603
AGGGCAACACCGTGCTGA
61.873
61.111
6.10
0.00
44.31
4.26
1775
3863
2.904866
GGGCAACACCGTGCTGAA
60.905
61.111
6.10
0.00
44.31
3.02
1776
3864
2.639286
GGCAACACCGTGCTGAAG
59.361
61.111
6.10
0.00
44.31
3.02
1777
3865
2.186826
GGCAACACCGTGCTGAAGT
61.187
57.895
6.10
0.00
44.31
3.01
1780
3868
1.859998
GCAACACCGTGCTGAAGTTTC
60.860
52.381
6.10
0.00
41.51
2.78
1781
3869
1.670811
CAACACCGTGCTGAAGTTTCT
59.329
47.619
0.00
0.00
0.00
2.52
1782
3870
2.038387
ACACCGTGCTGAAGTTTCTT
57.962
45.000
0.00
0.00
0.00
2.52
1783
3871
2.365582
ACACCGTGCTGAAGTTTCTTT
58.634
42.857
0.00
0.00
0.00
2.52
1809
3955
2.703416
TGCTGGTAGAAGTGCTGAATG
58.297
47.619
0.00
0.00
0.00
2.67
1847
3993
1.751351
GGGCTATTTTCCAGCTGAACC
59.249
52.381
17.39
0.00
39.09
3.62
1860
4006
3.503363
CAGCTGAACCTTGCAATCTTGTA
59.497
43.478
8.42
0.00
0.00
2.41
1868
4014
3.941483
CCTTGCAATCTTGTATCCTCGTT
59.059
43.478
0.00
0.00
0.00
3.85
1943
4091
2.637382
TGGAGCTGAAACACACATAGGA
59.363
45.455
0.00
0.00
0.00
2.94
1964
4120
1.523758
GTGTGACTGCCCTTAACAGG
58.476
55.000
0.00
0.00
39.55
4.00
2011
4167
4.103103
CTCGCGTCGCTCTCCACA
62.103
66.667
16.36
0.00
0.00
4.17
2035
4191
2.572284
GCACGAGCGAACCCTAGT
59.428
61.111
0.00
0.00
0.00
2.57
2146
4309
1.000646
ACTCTCTCCTCGTGGGGAC
60.001
63.158
0.85
0.00
38.07
4.46
2303
4466
2.094675
CTTGTTGCCGGGATTGATCTT
58.905
47.619
2.18
0.00
0.00
2.40
2327
4490
4.129737
GCGCCTGCGTCCTCAGTA
62.130
66.667
13.57
0.00
42.09
2.74
2395
4558
1.454847
GTTCAGGTGTTGGGTGGCA
60.455
57.895
0.00
0.00
0.00
4.92
2433
4596
1.676967
GAGTCCTTGGCTTGCCTGG
60.677
63.158
13.18
14.02
0.00
4.45
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
19
20
3.244353
CCATAGATACCTGCACTCCTTGG
60.244
52.174
0.00
0.00
0.00
3.61
24
25
2.029828
CCGTCCATAGATACCTGCACTC
60.030
54.545
0.00
0.00
0.00
3.51
28
29
1.272769
GTCCCGTCCATAGATACCTGC
59.727
57.143
0.00
0.00
0.00
4.85
31
32
1.811359
CTCGTCCCGTCCATAGATACC
59.189
57.143
0.00
0.00
0.00
2.73
90
92
8.099364
TGAAGATTTCTTTGTAAAGCGATCTT
57.901
30.769
21.46
21.46
42.80
2.40
91
93
7.672983
TGAAGATTTCTTTGTAAAGCGATCT
57.327
32.000
12.46
12.46
38.17
2.75
124
126
0.948623
CCGCTCAAATCACACGTGGA
60.949
55.000
21.57
14.45
0.00
4.02
206
2159
0.530744
TTGTTCTCCGCTAGCGATGT
59.469
50.000
37.39
0.00
42.83
3.06
211
2171
1.996191
CTGAACTTGTTCTCCGCTAGC
59.004
52.381
4.06
4.06
0.00
3.42
222
2182
1.541233
CCGTGCCTCTTCTGAACTTGT
60.541
52.381
0.00
0.00
0.00
3.16
272
2233
0.388649
GGTAGTGATCCTATGCCGCG
60.389
60.000
0.00
0.00
0.00
6.46
293
2254
8.630054
AGCAACTATACACCTGAACAATAAAA
57.370
30.769
0.00
0.00
0.00
1.52
305
2266
2.888594
TGAAGCGAGCAACTATACACC
58.111
47.619
0.00
0.00
0.00
4.16
340
2302
4.019174
CCAAGCACCTCTGGTTATTTCAT
58.981
43.478
0.00
0.00
35.89
2.57
351
2313
2.240510
TTGGGTTCCAAGCACCTCT
58.759
52.632
0.00
0.00
38.75
3.69
374
2336
3.181489
CCATCCTATATAGGTCCGCGAAC
60.181
52.174
25.06
0.00
44.02
3.95
403
2365
4.789075
CGTTCCCATCCGACGCGT
62.789
66.667
13.85
13.85
0.00
6.01
407
2369
1.447314
GACACCGTTCCCATCCGAC
60.447
63.158
0.00
0.00
0.00
4.79
412
2374
1.852157
ATGCCAGACACCGTTCCCAT
61.852
55.000
0.00
0.00
0.00
4.00
420
2383
0.035056
AACTAGCCATGCCAGACACC
60.035
55.000
0.00
0.00
0.00
4.16
421
2384
1.826385
AAACTAGCCATGCCAGACAC
58.174
50.000
0.00
0.00
0.00
3.67
422
2385
2.557924
CAAAAACTAGCCATGCCAGACA
59.442
45.455
0.00
0.00
0.00
3.41
436
2399
1.039856
ACGCCAATGCCTCAAAAACT
58.960
45.000
0.00
0.00
0.00
2.66
498
2464
5.709164
AGAAGATCAGTTGGATGGTGAAAAG
59.291
40.000
0.00
0.00
36.00
2.27
512
2478
6.904626
AGGCCATTTTGTATAGAAGATCAGT
58.095
36.000
5.01
0.00
0.00
3.41
562
2534
3.506067
CCACGCTTCCTTTGTCCTTTAAT
59.494
43.478
0.00
0.00
0.00
1.40
564
2536
2.105134
TCCACGCTTCCTTTGTCCTTTA
59.895
45.455
0.00
0.00
0.00
1.85
630
2602
0.107848
AGCAAATTCCTACCCGACGG
60.108
55.000
6.99
6.99
0.00
4.79
651
2623
1.279025
GGAAGGATGGCACCCCACTA
61.279
60.000
0.00
0.00
45.77
2.74
652
2624
2.616458
GGAAGGATGGCACCCCACT
61.616
63.158
0.00
0.00
45.77
4.00
674
2646
1.821753
ACTGACGACTCCCAGAAGATG
59.178
52.381
0.00
0.00
34.65
2.90
693
2665
1.802365
CGGTTACAGGCCAACTAACAC
59.198
52.381
5.01
1.40
0.00
3.32
705
2677
1.805945
GACGCAGAGCCGGTTACAG
60.806
63.158
1.90
0.00
0.00
2.74
708
2680
4.789075
GCGACGCAGAGCCGGTTA
62.789
66.667
16.42
0.00
0.00
2.85
716
2688
3.329114
CTGATAACAGCGACGCAGA
57.671
52.632
23.70
3.93
37.33
4.26
752
2724
9.505995
GGAAACGAAACAAAATAAAAGAGTACA
57.494
29.630
0.00
0.00
0.00
2.90
753
2725
9.505995
TGGAAACGAAACAAAATAAAAGAGTAC
57.494
29.630
0.00
0.00
0.00
2.73
771
2745
6.934645
ACAAGAGTCTAATGAAATGGAAACGA
59.065
34.615
0.00
0.00
0.00
3.85
772
2746
7.133891
ACAAGAGTCTAATGAAATGGAAACG
57.866
36.000
0.00
0.00
0.00
3.60
784
2758
9.877178
CCTTACAAAGTCATACAAGAGTCTAAT
57.123
33.333
0.00
0.00
0.00
1.73
798
2772
1.139256
TGACGTGGCCTTACAAAGTCA
59.861
47.619
3.32
4.34
37.69
3.41
808
2782
4.637771
GCCTTAATGACGTGGCCT
57.362
55.556
3.32
0.00
39.49
5.19
813
2787
2.124860
GCCCGGCCTTAATGACGT
60.125
61.111
0.00
0.00
0.00
4.34
815
2789
2.004808
GCTTGCCCGGCCTTAATGAC
62.005
60.000
7.03
0.00
0.00
3.06
827
2801
1.039856
TTTGAAGAAGGTGCTTGCCC
58.960
50.000
0.00
0.00
0.00
5.36
1566
3654
5.070770
TGCTGAAGAAAAGTTTGCAGAAA
57.929
34.783
0.00
0.00
0.00
2.52
1608
3696
4.266502
TGTTGCGTTAACAATTGCAGTTTC
59.733
37.500
5.05
1.17
45.86
2.78
1691
3779
0.446222
ACGAATTTCGCACGATTGGG
59.554
50.000
18.24
0.00
45.12
4.12
1703
3791
2.356382
TGCTCCGTGAACAAACGAATTT
59.644
40.909
0.00
0.00
46.49
1.82
1737
3825
0.110509
GCTGTGATGTGCGTGAGTTG
60.111
55.000
0.00
0.00
0.00
3.16
1759
3847
1.724582
AACTTCAGCACGGTGTTGCC
61.725
55.000
18.68
0.00
44.14
4.52
1768
3856
6.361748
CAGCATCTTAAAAGAAACTTCAGCAC
59.638
38.462
0.00
0.00
38.77
4.40
1773
3861
8.324163
TCTACCAGCATCTTAAAAGAAACTTC
57.676
34.615
0.00
0.00
38.77
3.01
1774
3862
8.691661
TTCTACCAGCATCTTAAAAGAAACTT
57.308
30.769
0.00
0.00
38.77
2.66
1775
3863
7.939588
ACTTCTACCAGCATCTTAAAAGAAACT
59.060
33.333
0.00
0.00
38.77
2.66
1776
3864
8.017946
CACTTCTACCAGCATCTTAAAAGAAAC
58.982
37.037
0.00
0.00
38.77
2.78
1777
3865
7.308589
GCACTTCTACCAGCATCTTAAAAGAAA
60.309
37.037
0.00
0.00
38.77
2.52
1780
3868
5.645497
AGCACTTCTACCAGCATCTTAAAAG
59.355
40.000
0.00
0.00
0.00
2.27
1781
3869
5.412594
CAGCACTTCTACCAGCATCTTAAAA
59.587
40.000
0.00
0.00
0.00
1.52
1782
3870
4.937620
CAGCACTTCTACCAGCATCTTAAA
59.062
41.667
0.00
0.00
0.00
1.52
1783
3871
4.222810
TCAGCACTTCTACCAGCATCTTAA
59.777
41.667
0.00
0.00
0.00
1.85
1809
3955
1.369091
CCGTCATGGTAGCTGCAACC
61.369
60.000
3.61
0.00
37.53
3.77
1820
3966
1.949525
CTGGAAAATAGCCCGTCATGG
59.050
52.381
0.00
0.00
37.55
3.66
1847
3993
4.631377
TGAACGAGGATACAAGATTGCAAG
59.369
41.667
4.94
0.00
41.41
4.01
1943
4091
0.466543
TGTTAAGGGCAGTCACACGT
59.533
50.000
0.00
0.00
0.00
4.49
1964
4120
3.120792
TCCTAATATTCGCAACGTGAGC
58.879
45.455
3.33
3.33
0.00
4.26
2072
4228
4.463879
CCTCTGACAGCGGCCAGG
62.464
72.222
2.24
0.00
0.00
4.45
2075
4231
4.154347
CCTCCTCTGACAGCGGCC
62.154
72.222
6.60
0.00
0.00
6.13
2120
4283
3.714871
GAGGAGAGAGTGCGCTGCC
62.715
68.421
3.44
0.27
32.85
4.85
2125
4288
2.487428
CCACGAGGAGAGAGTGCG
59.513
66.667
0.00
0.00
36.89
5.34
2229
4392
4.069232
CAGAACCTCCTCGCCGCA
62.069
66.667
0.00
0.00
0.00
5.69
2395
4558
2.687566
CCCACTAGCCCCTTCCGT
60.688
66.667
0.00
0.00
0.00
4.69
2433
4596
2.978010
CGCCACCCAACACCTGAC
60.978
66.667
0.00
0.00
0.00
3.51
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.