Multiple sequence alignment - TraesCS4B01G127100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G127100 chr4B 100.000 6869 0 0 1 6869 166005409 165998541 0.000000e+00 12685
1 TraesCS4B01G127100 chr4B 90.588 85 7 1 3818 3902 518097529 518097612 2.030000e-20 111
2 TraesCS4B01G127100 chr4D 94.523 3341 123 29 2840 6152 132131282 132134590 0.000000e+00 5101
3 TraesCS4B01G127100 chr4D 96.601 1736 46 8 1 1734 132127297 132129021 0.000000e+00 2867
4 TraesCS4B01G127100 chr4D 91.252 503 11 11 2339 2834 132129534 132130010 0.000000e+00 654
5 TraesCS4B01G127100 chr4D 86.245 538 33 26 1753 2257 132129006 132129535 4.680000e-151 545
6 TraesCS4B01G127100 chr4D 88.599 307 30 3 6568 6869 132134578 132134884 1.090000e-97 368
7 TraesCS4B01G127100 chr4D 81.667 180 28 3 3181 3357 21609103 21609280 2.000000e-30 145
8 TraesCS4B01G127100 chr4D 83.871 124 16 2 3783 3902 420942201 420942324 1.570000e-21 115
9 TraesCS4B01G127100 chr4A 96.669 2432 71 4 3725 6155 430868560 430866138 0.000000e+00 4034
10 TraesCS4B01G127100 chr4A 88.584 438 28 6 2360 2788 430870022 430869598 4.750000e-141 512
11 TraesCS4B01G127100 chr4A 92.562 242 16 2 1459 1700 430871209 430870970 5.100000e-91 346
12 TraesCS4B01G127100 chr4A 88.028 284 23 2 2903 3176 430868932 430868650 6.640000e-85 326
13 TraesCS4B01G127100 chr4A 90.400 250 13 7 2008 2255 430870271 430870031 1.110000e-82 318
14 TraesCS4B01G127100 chr4A 84.053 301 33 5 6573 6869 430866146 430865857 6.790000e-70 276
15 TraesCS4B01G127100 chr4A 88.017 242 1 5 1776 2008 430870524 430870302 1.900000e-65 261
16 TraesCS4B01G127100 chr4A 82.123 179 24 5 3187 3357 737493238 737493416 5.550000e-31 147
17 TraesCS4B01G127100 chr4A 83.740 123 16 2 3783 3901 43233712 43233590 5.630000e-21 113
18 TraesCS4B01G127100 chr5B 87.119 427 49 5 6155 6575 60905118 60905544 4.820000e-131 479
19 TraesCS4B01G127100 chr5B 97.849 93 2 0 2252 2344 26770503 26770411 1.980000e-35 161
20 TraesCS4B01G127100 chr5B 97.849 93 2 0 2256 2348 323861087 323861179 1.980000e-35 161
21 TraesCS4B01G127100 chr5B 80.420 143 20 7 3592 3729 697574693 697574554 1.220000e-17 102
22 TraesCS4B01G127100 chr7D 86.936 421 51 2 6156 6572 106260341 106260761 2.900000e-128 470
23 TraesCS4B01G127100 chr7D 75.254 493 86 27 1 469 263449221 263449701 1.170000e-47 202
24 TraesCS4B01G127100 chr7D 98.889 90 1 0 2251 2340 545608367 545608456 1.980000e-35 161
25 TraesCS4B01G127100 chr3B 85.480 427 58 2 6155 6577 422007982 422008408 6.320000e-120 442
26 TraesCS4B01G127100 chr3B 85.203 419 55 6 6155 6568 828296048 828296464 2.290000e-114 424
27 TraesCS4B01G127100 chr2A 86.058 416 48 9 6163 6573 49281913 49281503 8.180000e-119 438
28 TraesCS4B01G127100 chr2A 85.579 423 52 7 6156 6573 35636638 35637056 1.060000e-117 435
29 TraesCS4B01G127100 chr2A 78.135 311 55 8 3766 4074 745014874 745015173 1.180000e-42 185
30 TraesCS4B01G127100 chr5D 86.600 403 45 7 6163 6558 51923844 51923444 2.940000e-118 436
31 TraesCS4B01G127100 chr2B 85.511 421 51 8 6156 6571 541627038 541626623 1.370000e-116 431
32 TraesCS4B01G127100 chr2B 78.322 286 45 11 3762 4043 748723199 748723471 1.180000e-37 169
33 TraesCS4B01G127100 chr5A 85.000 420 59 4 6155 6571 52850449 52850031 2.290000e-114 424
34 TraesCS4B01G127100 chr7A 80.710 451 71 9 1 440 70193047 70193492 3.070000e-88 337
35 TraesCS4B01G127100 chr2D 78.947 285 42 12 3764 4043 613344471 613344742 1.970000e-40 178
36 TraesCS4B01G127100 chr2D 82.873 181 27 3 3181 3357 568860044 568859864 7.130000e-35 159
37 TraesCS4B01G127100 chr2D 96.842 95 2 1 2249 2343 270480861 270480954 2.560000e-34 158
38 TraesCS4B01G127100 chr2D 81.522 184 26 4 3181 3356 14641030 14641213 2.000000e-30 145
39 TraesCS4B01G127100 chr2D 81.421 183 29 4 3181 3358 209438498 209438680 2.000000e-30 145
40 TraesCS4B01G127100 chr2D 80.628 191 29 6 3181 3363 356541065 356541255 2.580000e-29 141
41 TraesCS4B01G127100 chr1D 90.984 122 7 4 2252 2372 460866498 460866616 1.980000e-35 161
42 TraesCS4B01G127100 chr1D 81.622 185 26 5 3181 3357 439829986 439829802 5.550000e-31 147
43 TraesCS4B01G127100 chr3A 97.826 92 2 0 2256 2347 215473719 215473810 7.130000e-35 159
44 TraesCS4B01G127100 chr6D 96.809 94 3 0 2251 2344 248003997 248004090 2.560000e-34 158
45 TraesCS4B01G127100 chrUn 95.876 97 3 1 2256 2351 67407112 67407016 9.220000e-34 156
46 TraesCS4B01G127100 chr1A 94.118 102 4 2 2242 2341 551465699 551465800 3.320000e-33 154
47 TraesCS4B01G127100 chr1A 82.486 177 25 5 3186 3357 432962935 432962760 4.290000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G127100 chr4B 165998541 166005409 6868 True 12685.000000 12685 100.000 1 6869 1 chr4B.!!$R1 6868
1 TraesCS4B01G127100 chr4D 132127297 132134884 7587 False 1907.000000 5101 91.444 1 6869 5 chr4D.!!$F3 6868
2 TraesCS4B01G127100 chr4A 430865857 430871209 5352 True 867.571429 4034 89.759 1459 6869 7 chr4A.!!$R2 5410

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 665 0.452184 CTCGGTGTATGTGAGCGACT 59.548 55.0 0.00 0.0 38.34 4.18 F
1627 1630 0.107654 AAGCAGAATCCTACCGCACC 60.108 55.0 0.00 0.0 0.00 5.01 F
3384 5695 0.172803 ACGGTCGCAGTACCATTCTC 59.827 55.0 0.00 0.0 39.71 2.87 F
3616 5931 0.036952 GCAAGGAGCTGCACAGTAGA 60.037 55.0 8.35 0.0 42.17 2.59 F
3628 5943 0.107508 ACAGTAGATTGCAGCGCCAT 60.108 50.0 2.29 0.0 0.00 4.40 F
3634 5949 0.305922 GATTGCAGCGCCATACTGTC 59.694 55.0 2.29 0.0 37.47 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1889 2299 0.508641 GTGCAACAGTAGAGTGCACG 59.491 55.000 12.01 0.0 44.67 5.34 R
3614 5929 0.107508 ACAGTATGGCGCTGCAATCT 60.108 50.000 7.64 0.0 43.62 2.40 R
5089 7405 0.038618 TGTGGTGACCGAAGATCACG 60.039 55.000 0.00 0.0 35.41 4.35 R
5248 7564 1.003112 GGTACCATGTCACCGGCAA 60.003 57.895 7.15 0.0 0.00 4.52 R
5440 7756 2.281484 GGCAAGCTGGACGGTGAA 60.281 61.111 0.00 0.0 0.00 3.18 R
5923 8242 3.189285 GCACCATGAAAATCCAATTCCG 58.811 45.455 0.00 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.003173 CGGAAGTGCCCCTCCTCA 61.003 66.667 0.00 0.00 0.00 3.86
48 49 1.562672 GCCCCTCCTCAAAGCACCTA 61.563 60.000 0.00 0.00 0.00 3.08
89 90 1.292541 GCGAAACCTCCCTTCTCGT 59.707 57.895 0.00 0.00 32.23 4.18
94 95 0.966370 AACCTCCCTTCTCGTCCTCG 60.966 60.000 0.00 0.00 38.55 4.63
251 252 2.812619 GCCCATCGCCTCTAAGCCT 61.813 63.158 0.00 0.00 0.00 4.58
322 323 2.126031 GCGGAAGGTGGAGTCGAC 60.126 66.667 7.70 7.70 0.00 4.20
372 373 2.218239 GCGACTAACGAGAGCAGCG 61.218 63.158 0.00 0.00 45.77 5.18
392 393 0.971447 GGTTGGAGGACTAGCGGAGT 60.971 60.000 0.00 0.00 42.90 3.85
425 426 3.458163 GGGTCGGAGTGATCGCCA 61.458 66.667 1.76 0.00 33.04 5.69
576 577 8.750515 TCATTAAATCTCAAGATGTTATGCCA 57.249 30.769 4.87 0.00 34.49 4.92
588 589 2.027561 TGTTATGCCAGCTAAGTCCGTT 60.028 45.455 0.00 0.00 0.00 4.44
592 593 1.079503 GCCAGCTAAGTCCGTTGAAG 58.920 55.000 0.00 0.00 0.00 3.02
593 594 1.726853 CCAGCTAAGTCCGTTGAAGG 58.273 55.000 0.00 0.00 0.00 3.46
602 603 2.501723 AGTCCGTTGAAGGTGCTCATAT 59.498 45.455 0.00 0.00 0.00 1.78
603 604 3.704566 AGTCCGTTGAAGGTGCTCATATA 59.295 43.478 0.00 0.00 0.00 0.86
609 610 5.221263 CGTTGAAGGTGCTCATATAGGTAGT 60.221 44.000 0.00 0.00 0.00 2.73
626 627 2.399396 AGTATTGTTTGTGCGTGCAC 57.601 45.000 17.72 17.72 46.33 4.57
634 635 3.434319 GTGCGTGCACTCATGGGG 61.434 66.667 13.43 0.00 43.12 4.96
664 665 0.452184 CTCGGTGTATGTGAGCGACT 59.548 55.000 0.00 0.00 38.34 4.18
723 725 6.072112 TCGGATAGCCAAATAAGCATTTTC 57.928 37.500 0.00 0.00 31.82 2.29
724 726 5.009610 TCGGATAGCCAAATAAGCATTTTCC 59.990 40.000 0.00 0.00 31.82 3.13
728 730 2.505407 GCCAAATAAGCATTTTCCCCCT 59.495 45.455 0.00 0.00 31.82 4.79
729 731 3.709141 GCCAAATAAGCATTTTCCCCCTA 59.291 43.478 0.00 0.00 31.82 3.53
814 817 7.223971 TCCGTATGAAGTTAAAAAGATCATCCG 59.776 37.037 0.00 0.00 33.17 4.18
972 975 2.232208 CCCTCTCCATTTCCACAAAAGC 59.768 50.000 0.00 0.00 0.00 3.51
1625 1628 1.277842 TCAAAGCAGAATCCTACCGCA 59.722 47.619 0.00 0.00 0.00 5.69
1627 1630 0.107654 AAGCAGAATCCTACCGCACC 60.108 55.000 0.00 0.00 0.00 5.01
1678 1681 5.601662 TGATTACCTTGCCGAGAGATTAAG 58.398 41.667 0.00 0.00 0.00 1.85
1702 1705 3.407698 ACACAGAATGGACGCACAATAA 58.592 40.909 0.00 0.00 43.62 1.40
1703 1706 3.818210 ACACAGAATGGACGCACAATAAA 59.182 39.130 0.00 0.00 43.62 1.40
1704 1707 4.458989 ACACAGAATGGACGCACAATAAAT 59.541 37.500 0.00 0.00 43.62 1.40
1705 1708 5.645929 ACACAGAATGGACGCACAATAAATA 59.354 36.000 0.00 0.00 43.62 1.40
1719 1722 7.141363 GCACAATAAATAGGCTGATTGGTTAG 58.859 38.462 0.00 0.00 34.30 2.34
1720 1723 7.013274 GCACAATAAATAGGCTGATTGGTTAGA 59.987 37.037 0.00 0.00 34.30 2.10
1721 1724 9.071276 CACAATAAATAGGCTGATTGGTTAGAT 57.929 33.333 0.00 0.00 34.30 1.98
1727 1730 9.920946 AAATAGGCTGATTGGTTAGATAAAGAA 57.079 29.630 0.00 0.00 0.00 2.52
1730 1733 8.910351 AGGCTGATTGGTTAGATAAAGAATAC 57.090 34.615 0.00 0.00 0.00 1.89
1740 2140 7.595875 GGTTAGATAAAGAATACTCTTCCTCGC 59.404 40.741 0.00 0.00 41.23 5.03
1889 2299 2.622436 AGATTCAGCCAACTAACGAGC 58.378 47.619 0.00 0.00 0.00 5.03
1926 2336 0.903454 ACCGGCCAGCAAGTAGTAGT 60.903 55.000 0.00 0.00 0.00 2.73
1927 2337 1.108776 CCGGCCAGCAAGTAGTAGTA 58.891 55.000 2.24 0.00 0.00 1.82
1928 2338 1.202382 CCGGCCAGCAAGTAGTAGTAC 60.202 57.143 2.24 0.00 0.00 2.73
2026 2467 0.545071 TGTGTGAGGATGAGCCAGGA 60.545 55.000 0.00 0.00 40.02 3.86
2197 2639 2.242043 CTTGGTTTCAGTTCAGCCCAT 58.758 47.619 0.00 0.00 0.00 4.00
2255 2697 7.037802 TGTCATCATCATCTAGGAGCCAAATAT 60.038 37.037 0.00 0.00 0.00 1.28
2256 2698 8.481314 GTCATCATCATCTAGGAGCCAAATATA 58.519 37.037 0.00 0.00 0.00 0.86
2257 2699 8.481314 TCATCATCATCTAGGAGCCAAATATAC 58.519 37.037 0.00 0.00 0.00 1.47
2258 2700 8.484575 CATCATCATCTAGGAGCCAAATATACT 58.515 37.037 0.00 0.00 0.00 2.12
2259 2701 8.072321 TCATCATCTAGGAGCCAAATATACTC 57.928 38.462 0.00 0.00 0.00 2.59
2264 2706 3.704800 GGAGCCAAATATACTCCCTCC 57.295 52.381 0.00 0.00 43.54 4.30
2265 2707 2.028020 GGAGCCAAATATACTCCCTCCG 60.028 54.545 0.00 0.00 43.54 4.63
2266 2708 2.633481 GAGCCAAATATACTCCCTCCGT 59.367 50.000 0.00 0.00 0.00 4.69
2267 2709 3.830755 GAGCCAAATATACTCCCTCCGTA 59.169 47.826 0.00 0.00 0.00 4.02
2268 2710 4.228824 AGCCAAATATACTCCCTCCGTAA 58.771 43.478 0.00 0.00 0.00 3.18
2269 2711 4.657039 AGCCAAATATACTCCCTCCGTAAA 59.343 41.667 0.00 0.00 0.00 2.01
2270 2712 4.753610 GCCAAATATACTCCCTCCGTAAAC 59.246 45.833 0.00 0.00 0.00 2.01
2271 2713 5.454329 GCCAAATATACTCCCTCCGTAAACT 60.454 44.000 0.00 0.00 0.00 2.66
2272 2714 6.239402 GCCAAATATACTCCCTCCGTAAACTA 60.239 42.308 0.00 0.00 0.00 2.24
2273 2715 7.687592 GCCAAATATACTCCCTCCGTAAACTAA 60.688 40.741 0.00 0.00 0.00 2.24
2274 2716 8.373220 CCAAATATACTCCCTCCGTAAACTAAT 58.627 37.037 0.00 0.00 0.00 1.73
2281 2723 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2282 2724 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2283 2725 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2284 2726 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2285 2727 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2286 2728 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2287 2729 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
2288 2730 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2289 2731 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2301 2743 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
2302 2744 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
2336 2778 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
2404 2849 6.706270 AGTGTAGTGTCCAGATTTTTGTAGTG 59.294 38.462 0.00 0.00 0.00 2.74
2510 2972 2.035632 CCACCCAGATCAGGACTACTC 58.964 57.143 5.57 0.00 0.00 2.59
2511 2973 2.358721 CCACCCAGATCAGGACTACTCT 60.359 54.545 5.57 0.00 0.00 3.24
2512 2974 2.692557 CACCCAGATCAGGACTACTCTG 59.307 54.545 5.57 0.00 35.88 3.35
2513 2975 2.313342 ACCCAGATCAGGACTACTCTGT 59.687 50.000 5.57 0.00 34.62 3.41
2514 2976 2.955660 CCCAGATCAGGACTACTCTGTC 59.044 54.545 5.57 0.00 34.62 3.51
2515 2977 3.372566 CCCAGATCAGGACTACTCTGTCT 60.373 52.174 5.57 0.00 37.16 3.41
2516 2978 3.882888 CCAGATCAGGACTACTCTGTCTC 59.117 52.174 0.00 0.00 37.16 3.36
2517 2979 4.385199 CCAGATCAGGACTACTCTGTCTCT 60.385 50.000 0.00 0.00 37.16 3.10
2518 2980 5.163248 CCAGATCAGGACTACTCTGTCTCTA 60.163 48.000 0.00 0.00 37.16 2.43
2519 2981 5.991606 CAGATCAGGACTACTCTGTCTCTAG 59.008 48.000 0.00 0.00 37.16 2.43
2520 2982 4.145365 TCAGGACTACTCTGTCTCTAGC 57.855 50.000 0.00 0.00 37.16 3.42
2521 2983 3.778075 TCAGGACTACTCTGTCTCTAGCT 59.222 47.826 0.00 0.00 37.16 3.32
2610 3072 9.334693 CTAATCACTGTTGCTTTGAAAATAGAC 57.665 33.333 0.00 0.00 0.00 2.59
2629 3094 1.200483 CCTAATACGCGACAGTGCTG 58.800 55.000 15.93 0.00 0.00 4.41
2651 3116 1.289160 ATCTGGGGTTAGCAGCTCAA 58.711 50.000 0.00 0.00 27.67 3.02
2692 3157 5.836395 GTGGGAAGTACTCCAACAGCTAGT 61.836 50.000 4.92 0.00 46.58 2.57
2696 3161 3.093057 AGTACTCCAACAGCTAGTCAGG 58.907 50.000 0.00 0.00 0.00 3.86
2725 3190 0.810031 GCCGCCTATCTGCTTTTCGA 60.810 55.000 0.00 0.00 0.00 3.71
2749 3216 8.700644 CGAACAATGAATATAAGTACTACTGCC 58.299 37.037 0.00 0.00 0.00 4.85
2849 4813 1.265905 CAACGGGGTGTTAAACTCTGC 59.734 52.381 0.00 0.00 39.56 4.26
2874 4838 7.737744 GCGATTCGAGATTAAACAATGATGTAG 59.262 37.037 10.88 0.00 39.40 2.74
2941 5225 2.437651 TCTGTGAATCCACTGAACCACA 59.562 45.455 0.00 0.00 44.62 4.17
2968 5252 5.654603 TCGTAACTTGACATGACAGGTAT 57.345 39.130 12.80 6.80 30.27 2.73
3028 5322 6.002082 TGATTGGAGAGGCAAAGATATGATG 58.998 40.000 0.00 0.00 0.00 3.07
3055 5349 1.133823 AGATATCCGTGCCATTGCCAA 60.134 47.619 0.00 0.00 36.33 4.52
3072 5366 2.800250 CCAACCAGATTCCTCTTGCTT 58.200 47.619 0.00 0.00 0.00 3.91
3130 5428 1.545582 CATTGCCCGGTTGTCAGAAAT 59.454 47.619 0.00 0.00 0.00 2.17
3134 5432 2.223923 TGCCCGGTTGTCAGAAATTTTG 60.224 45.455 0.00 0.00 0.00 2.44
3137 5435 4.485163 CCCGGTTGTCAGAAATTTTGATC 58.515 43.478 0.00 0.00 0.00 2.92
3170 5468 5.473504 TCACTCCAATTTTTGAAGTAGGAGC 59.526 40.000 0.00 0.00 43.76 4.70
3304 5604 9.585099 TCAAGGATATAATTTTTGTTGACATGC 57.415 29.630 0.00 0.00 0.00 4.06
3364 5664 6.922247 TGACACAAGTTACAAATAAACCGA 57.078 33.333 0.00 0.00 0.00 4.69
3366 5666 7.188157 TGACACAAGTTACAAATAAACCGAAC 58.812 34.615 0.00 0.00 0.00 3.95
3367 5667 6.193761 ACACAAGTTACAAATAAACCGAACG 58.806 36.000 0.00 0.00 0.00 3.95
3384 5695 0.172803 ACGGTCGCAGTACCATTCTC 59.827 55.000 0.00 0.00 39.71 2.87
3394 5705 4.521146 CAGTACCATTCTCTCTTTGCCAT 58.479 43.478 0.00 0.00 0.00 4.40
3397 5708 6.037610 CAGTACCATTCTCTCTTTGCCATAAC 59.962 42.308 0.00 0.00 0.00 1.89
3427 5738 4.111916 CAAAAGACACAAATTTGACCGCT 58.888 39.130 24.64 12.27 36.41 5.52
3431 5742 0.667184 CACAAATTTGACCGCTGGGC 60.667 55.000 24.64 0.00 36.48 5.36
3432 5743 1.112315 ACAAATTTGACCGCTGGGCA 61.112 50.000 24.64 0.00 40.08 5.36
3448 5759 4.996758 GCTGGGCAAAACTATTCACAAATT 59.003 37.500 0.00 0.00 0.00 1.82
3449 5760 5.106987 GCTGGGCAAAACTATTCACAAATTG 60.107 40.000 0.00 0.00 0.00 2.32
3492 5803 5.074746 TCATCTAGCTGACCCCTAATGTA 57.925 43.478 0.00 0.00 0.00 2.29
3506 5817 3.005897 CCTAATGTACAGCGCCTGATAGT 59.994 47.826 2.29 0.00 35.18 2.12
3510 5821 3.284617 TGTACAGCGCCTGATAGTAAGA 58.715 45.455 2.29 0.00 35.18 2.10
3512 5823 2.100197 ACAGCGCCTGATAGTAAGACA 58.900 47.619 2.29 0.00 35.18 3.41
3515 5826 2.359531 AGCGCCTGATAGTAAGACACTC 59.640 50.000 2.29 0.00 38.80 3.51
3523 5838 7.001674 CCTGATAGTAAGACACTCCACTCTAT 58.998 42.308 0.00 0.00 38.80 1.98
3526 5841 5.331876 AGTAAGACACTCCACTCTATTGC 57.668 43.478 0.00 0.00 28.33 3.56
3553 5868 2.480845 CCTAATACTTAGGCGCCACAC 58.519 52.381 31.54 0.00 45.72 3.82
3567 5882 3.307906 ACACGCCCGGCAGTTAGA 61.308 61.111 10.77 0.00 0.00 2.10
3572 5887 0.179094 CGCCCGGCAGTTAGATGTTA 60.179 55.000 10.77 0.00 0.00 2.41
3580 5895 5.348986 CGGCAGTTAGATGTTACACTACAT 58.651 41.667 0.00 0.00 41.30 2.29
3587 5902 7.659799 AGTTAGATGTTACACTACATTGTGCAA 59.340 33.333 0.00 0.00 38.80 4.08
3588 5903 6.241207 AGATGTTACACTACATTGTGCAAC 57.759 37.500 0.00 0.00 41.83 4.17
3590 5905 3.872182 TGTTACACTACATTGTGCAACGT 59.128 39.130 0.00 0.00 43.42 3.99
3598 5913 0.798776 ATTGTGCAACGTCTAGCTGC 59.201 50.000 0.00 2.20 42.39 5.25
3614 5929 4.701663 GCAAGGAGCTGCACAGTA 57.298 55.556 8.35 0.00 42.17 2.74
3615 5930 2.464682 GCAAGGAGCTGCACAGTAG 58.535 57.895 8.35 0.00 42.17 2.57
3616 5931 0.036952 GCAAGGAGCTGCACAGTAGA 60.037 55.000 8.35 0.00 42.17 2.59
3617 5932 1.406614 GCAAGGAGCTGCACAGTAGAT 60.407 52.381 8.35 0.00 42.17 1.98
3618 5933 2.938756 GCAAGGAGCTGCACAGTAGATT 60.939 50.000 8.35 0.00 42.17 2.40
3619 5934 2.676839 CAAGGAGCTGCACAGTAGATTG 59.323 50.000 8.35 0.00 0.00 2.67
3620 5935 1.012841 GGAGCTGCACAGTAGATTGC 58.987 55.000 0.00 0.00 39.33 3.56
3621 5936 1.676916 GGAGCTGCACAGTAGATTGCA 60.677 52.381 0.00 0.00 46.43 4.08
3624 5939 2.459245 TGCACAGTAGATTGCAGCG 58.541 52.632 0.00 0.00 43.79 5.18
3625 5940 1.061570 GCACAGTAGATTGCAGCGC 59.938 57.895 0.00 0.00 38.68 5.92
3626 5941 1.717937 CACAGTAGATTGCAGCGCC 59.282 57.895 2.29 0.00 0.00 6.53
3627 5942 1.020861 CACAGTAGATTGCAGCGCCA 61.021 55.000 2.29 0.00 0.00 5.69
3628 5943 0.107508 ACAGTAGATTGCAGCGCCAT 60.108 50.000 2.29 0.00 0.00 4.40
3629 5944 1.138859 ACAGTAGATTGCAGCGCCATA 59.861 47.619 2.29 0.00 0.00 2.74
3630 5945 1.528586 CAGTAGATTGCAGCGCCATAC 59.471 52.381 2.29 0.00 0.00 2.39
3631 5946 1.414181 AGTAGATTGCAGCGCCATACT 59.586 47.619 2.29 0.00 0.00 2.12
3632 5947 1.528586 GTAGATTGCAGCGCCATACTG 59.471 52.381 2.29 0.00 38.22 2.74
3633 5948 0.107508 AGATTGCAGCGCCATACTGT 60.108 50.000 2.29 0.00 37.47 3.55
3634 5949 0.305922 GATTGCAGCGCCATACTGTC 59.694 55.000 2.29 0.00 37.47 3.51
3635 5950 1.431488 ATTGCAGCGCCATACTGTCG 61.431 55.000 2.29 0.00 37.47 4.35
3642 5957 3.125607 CCATACTGTCGGGCGCTA 58.874 61.111 7.64 0.00 0.00 4.26
3649 5964 2.277084 ACTGTCGGGCGCTATAAAAAG 58.723 47.619 7.64 0.00 0.00 2.27
3658 5973 3.883489 GGCGCTATAAAAAGGATCAAGGT 59.117 43.478 7.64 0.00 0.00 3.50
3664 5979 7.201732 CGCTATAAAAAGGATCAAGGTGTGAAT 60.202 37.037 0.00 0.00 40.50 2.57
3705 6020 7.913674 TTGGTTTGTGAAATACTTTTGCTTT 57.086 28.000 0.00 0.00 0.00 3.51
3710 6025 5.288804 TGTGAAATACTTTTGCTTTGAGGC 58.711 37.500 0.00 0.00 0.00 4.70
4904 7220 4.021925 GCCTGGACCGGACAAGCT 62.022 66.667 9.46 0.00 0.00 3.74
5182 7498 8.405531 GGGATCGAATTTCAGATGACAAAATTA 58.594 33.333 7.98 0.00 33.85 1.40
5248 7564 0.779997 AATTGGTGCAGGAGGGAAGT 59.220 50.000 0.00 0.00 0.00 3.01
5334 7650 2.446036 GACCTGGCGAGGGGGTAT 60.446 66.667 19.90 0.00 44.84 2.73
5510 7829 1.135315 CAACGAAGCATCTTGGCCG 59.865 57.895 0.00 0.00 0.00 6.13
5511 7830 2.690778 AACGAAGCATCTTGGCCGC 61.691 57.895 0.00 0.00 0.00 6.53
5637 7956 3.376078 GTGTACGCGTCCCCTCCA 61.376 66.667 18.63 0.84 0.00 3.86
5998 8317 5.297029 GGAATTAGAACTGCACCTGATTACC 59.703 44.000 0.00 0.00 0.00 2.85
6000 8319 3.340814 AGAACTGCACCTGATTACCAG 57.659 47.619 0.00 0.00 42.55 4.00
6001 8320 2.639839 AGAACTGCACCTGATTACCAGT 59.360 45.455 0.00 0.00 41.33 4.00
6002 8321 3.838317 AGAACTGCACCTGATTACCAGTA 59.162 43.478 0.00 0.00 41.33 2.74
6003 8322 3.895232 ACTGCACCTGATTACCAGTAG 57.105 47.619 0.00 0.00 41.33 2.57
6040 8359 4.082787 ACTGCAAACGATTATGAAACTGGG 60.083 41.667 0.00 0.00 0.00 4.45
6044 8363 2.919228 ACGATTATGAAACTGGGAGCC 58.081 47.619 0.00 0.00 0.00 4.70
6152 8472 0.390866 ATGCGCTTCACCTCTGTCAG 60.391 55.000 9.73 0.00 0.00 3.51
6185 8505 7.050970 GTATCACATGATACCACTCCTTACA 57.949 40.000 17.70 0.00 46.87 2.41
6186 8506 6.753913 ATCACATGATACCACTCCTTACAT 57.246 37.500 0.00 0.00 32.01 2.29
6187 8507 5.917462 TCACATGATACCACTCCTTACATG 58.083 41.667 0.00 0.00 39.27 3.21
6188 8508 4.512944 CACATGATACCACTCCTTACATGC 59.487 45.833 0.00 0.00 37.66 4.06
6189 8509 4.410228 ACATGATACCACTCCTTACATGCT 59.590 41.667 0.00 0.00 37.66 3.79
6190 8510 5.602561 ACATGATACCACTCCTTACATGCTA 59.397 40.000 0.00 0.00 37.66 3.49
6191 8511 5.531122 TGATACCACTCCTTACATGCTAC 57.469 43.478 0.00 0.00 0.00 3.58
6192 8512 4.344102 TGATACCACTCCTTACATGCTACC 59.656 45.833 0.00 0.00 0.00 3.18
6193 8513 2.546899 ACCACTCCTTACATGCTACCA 58.453 47.619 0.00 0.00 0.00 3.25
6194 8514 3.115390 ACCACTCCTTACATGCTACCAT 58.885 45.455 0.00 0.00 0.00 3.55
6211 8531 9.860650 ATGCTACCATGATACCAACTTATAAAA 57.139 29.630 0.00 0.00 0.00 1.52
6212 8532 9.860650 TGCTACCATGATACCAACTTATAAAAT 57.139 29.630 0.00 0.00 0.00 1.82
6265 8585 5.867903 AAAAATCAGGGATGTTCACAACA 57.132 34.783 0.00 0.00 46.94 3.33
6313 8633 9.613428 AATCAGATTTAAATTCGACATACAGGA 57.387 29.630 1.43 0.00 0.00 3.86
6314 8634 9.613428 ATCAGATTTAAATTCGACATACAGGAA 57.387 29.630 1.43 0.00 0.00 3.36
6315 8635 9.098355 TCAGATTTAAATTCGACATACAGGAAG 57.902 33.333 1.43 0.00 0.00 3.46
6316 8636 9.098355 CAGATTTAAATTCGACATACAGGAAGA 57.902 33.333 1.43 0.00 0.00 2.87
6317 8637 9.319143 AGATTTAAATTCGACATACAGGAAGAG 57.681 33.333 1.43 0.00 0.00 2.85
6318 8638 9.314321 GATTTAAATTCGACATACAGGAAGAGA 57.686 33.333 1.43 0.00 0.00 3.10
6319 8639 9.667107 ATTTAAATTCGACATACAGGAAGAGAA 57.333 29.630 0.00 0.00 0.00 2.87
6320 8640 9.496873 TTTAAATTCGACATACAGGAAGAGAAA 57.503 29.630 0.00 0.00 0.00 2.52
6321 8641 6.969828 AATTCGACATACAGGAAGAGAAAC 57.030 37.500 0.00 0.00 0.00 2.78
6322 8642 5.462530 TTCGACATACAGGAAGAGAAACA 57.537 39.130 0.00 0.00 0.00 2.83
6323 8643 5.462530 TCGACATACAGGAAGAGAAACAA 57.537 39.130 0.00 0.00 0.00 2.83
6324 8644 5.849510 TCGACATACAGGAAGAGAAACAAA 58.150 37.500 0.00 0.00 0.00 2.83
6325 8645 6.285224 TCGACATACAGGAAGAGAAACAAAA 58.715 36.000 0.00 0.00 0.00 2.44
6326 8646 6.764085 TCGACATACAGGAAGAGAAACAAAAA 59.236 34.615 0.00 0.00 0.00 1.94
6349 8669 9.865321 AAAAAGACAAATCCATCATGAATAGTG 57.135 29.630 0.00 0.00 0.00 2.74
6350 8670 8.585471 AAAGACAAATCCATCATGAATAGTGT 57.415 30.769 0.00 0.00 0.00 3.55
6351 8671 7.798596 AGACAAATCCATCATGAATAGTGTC 57.201 36.000 0.00 9.16 33.51 3.67
6352 8672 7.341030 AGACAAATCCATCATGAATAGTGTCA 58.659 34.615 20.36 0.25 35.29 3.58
6353 8673 7.830697 AGACAAATCCATCATGAATAGTGTCAA 59.169 33.333 20.36 0.00 35.29 3.18
6354 8674 8.352137 ACAAATCCATCATGAATAGTGTCAAA 57.648 30.769 0.00 0.00 0.00 2.69
6355 8675 8.805175 ACAAATCCATCATGAATAGTGTCAAAA 58.195 29.630 0.00 0.00 0.00 2.44
6356 8676 9.297586 CAAATCCATCATGAATAGTGTCAAAAG 57.702 33.333 0.00 0.00 0.00 2.27
6357 8677 8.812513 AATCCATCATGAATAGTGTCAAAAGA 57.187 30.769 0.00 0.00 0.00 2.52
6358 8678 8.812513 ATCCATCATGAATAGTGTCAAAAGAA 57.187 30.769 0.00 0.00 0.00 2.52
6359 8679 8.272545 TCCATCATGAATAGTGTCAAAAGAAG 57.727 34.615 0.00 0.00 0.00 2.85
6360 8680 8.102676 TCCATCATGAATAGTGTCAAAAGAAGA 58.897 33.333 0.00 0.00 0.00 2.87
6361 8681 8.180267 CCATCATGAATAGTGTCAAAAGAAGAC 58.820 37.037 0.00 0.00 36.55 3.01
6362 8682 8.724229 CATCATGAATAGTGTCAAAAGAAGACA 58.276 33.333 0.00 0.00 43.23 3.41
6363 8683 8.675705 TCATGAATAGTGTCAAAAGAAGACAA 57.324 30.769 0.00 0.00 46.50 3.18
6364 8684 8.777413 TCATGAATAGTGTCAAAAGAAGACAAG 58.223 33.333 0.00 0.00 46.50 3.16
6365 8685 6.959361 TGAATAGTGTCAAAAGAAGACAAGC 58.041 36.000 0.00 0.00 46.50 4.01
6366 8686 6.542005 TGAATAGTGTCAAAAGAAGACAAGCA 59.458 34.615 0.00 0.00 46.50 3.91
6367 8687 4.889832 AGTGTCAAAAGAAGACAAGCAG 57.110 40.909 0.00 0.00 46.50 4.24
6368 8688 4.517285 AGTGTCAAAAGAAGACAAGCAGA 58.483 39.130 0.00 0.00 46.50 4.26
6369 8689 4.943705 AGTGTCAAAAGAAGACAAGCAGAA 59.056 37.500 0.00 0.00 46.50 3.02
6370 8690 5.415701 AGTGTCAAAAGAAGACAAGCAGAAA 59.584 36.000 0.00 0.00 46.50 2.52
6371 8691 6.096001 AGTGTCAAAAGAAGACAAGCAGAAAT 59.904 34.615 0.00 0.00 46.50 2.17
6372 8692 6.197842 GTGTCAAAAGAAGACAAGCAGAAATG 59.802 38.462 0.00 0.00 46.50 2.32
6373 8693 5.174579 GTCAAAAGAAGACAAGCAGAAATGC 59.825 40.000 0.00 0.00 36.06 3.56
6374 8694 3.930634 AAGAAGACAAGCAGAAATGCC 57.069 42.857 0.00 0.00 34.90 4.40
6375 8695 2.867624 AGAAGACAAGCAGAAATGCCA 58.132 42.857 0.00 0.00 34.90 4.92
6376 8696 2.555757 AGAAGACAAGCAGAAATGCCAC 59.444 45.455 0.00 0.00 34.90 5.01
6377 8697 2.283145 AGACAAGCAGAAATGCCACT 57.717 45.000 0.00 0.00 34.90 4.00
6378 8698 3.423539 AGACAAGCAGAAATGCCACTA 57.576 42.857 0.00 0.00 34.90 2.74
6379 8699 3.960571 AGACAAGCAGAAATGCCACTAT 58.039 40.909 0.00 0.00 34.90 2.12
6380 8700 4.338879 AGACAAGCAGAAATGCCACTATT 58.661 39.130 0.00 0.00 34.90 1.73
6381 8701 4.397417 AGACAAGCAGAAATGCCACTATTC 59.603 41.667 0.00 0.00 34.90 1.75
6382 8702 4.081406 ACAAGCAGAAATGCCACTATTCA 58.919 39.130 0.00 0.00 34.90 2.57
6383 8703 4.082571 ACAAGCAGAAATGCCACTATTCAC 60.083 41.667 0.00 0.00 34.90 3.18
6384 8704 3.689347 AGCAGAAATGCCACTATTCACA 58.311 40.909 0.00 0.00 34.90 3.58
6385 8705 4.275810 AGCAGAAATGCCACTATTCACAT 58.724 39.130 0.00 0.00 34.90 3.21
6386 8706 4.337555 AGCAGAAATGCCACTATTCACATC 59.662 41.667 0.00 0.00 34.90 3.06
6387 8707 4.337555 GCAGAAATGCCACTATTCACATCT 59.662 41.667 0.00 0.00 0.00 2.90
6388 8708 5.732528 GCAGAAATGCCACTATTCACATCTG 60.733 44.000 0.00 0.00 34.25 2.90
6389 8709 5.587443 CAGAAATGCCACTATTCACATCTGA 59.413 40.000 0.00 0.00 33.57 3.27
6390 8710 6.094464 CAGAAATGCCACTATTCACATCTGAA 59.906 38.462 0.00 0.00 40.77 3.02
6391 8711 6.832384 AGAAATGCCACTATTCACATCTGAAT 59.168 34.615 1.66 1.66 46.84 2.57
6392 8712 7.341256 AGAAATGCCACTATTCACATCTGAATT 59.659 33.333 1.29 0.00 43.48 2.17
6393 8713 7.414222 AATGCCACTATTCACATCTGAATTT 57.586 32.000 1.29 0.00 43.48 1.82
6394 8714 6.198650 TGCCACTATTCACATCTGAATTTG 57.801 37.500 1.29 0.88 43.48 2.32
6395 8715 5.711506 TGCCACTATTCACATCTGAATTTGT 59.288 36.000 1.29 0.02 43.48 2.83
6396 8716 6.127925 TGCCACTATTCACATCTGAATTTGTC 60.128 38.462 1.29 0.00 43.48 3.18
6397 8717 6.127925 GCCACTATTCACATCTGAATTTGTCA 60.128 38.462 1.29 0.00 43.48 3.58
6398 8718 7.415989 GCCACTATTCACATCTGAATTTGTCAT 60.416 37.037 1.29 0.00 43.48 3.06
6399 8719 8.464404 CCACTATTCACATCTGAATTTGTCATT 58.536 33.333 1.29 0.00 43.48 2.57
6400 8720 9.850628 CACTATTCACATCTGAATTTGTCATTT 57.149 29.630 1.29 0.00 43.48 2.32
6411 8731 9.354673 TCTGAATTTGTCATTTTAGTTTCTCCT 57.645 29.630 0.00 0.00 35.07 3.69
6412 8732 9.971922 CTGAATTTGTCATTTTAGTTTCTCCTT 57.028 29.630 0.00 0.00 35.07 3.36
6413 8733 9.748708 TGAATTTGTCATTTTAGTTTCTCCTTG 57.251 29.630 0.00 0.00 0.00 3.61
6414 8734 9.965824 GAATTTGTCATTTTAGTTTCTCCTTGA 57.034 29.630 0.00 0.00 0.00 3.02
6415 8735 9.971922 AATTTGTCATTTTAGTTTCTCCTTGAG 57.028 29.630 0.00 0.00 0.00 3.02
6416 8736 8.519799 TTTGTCATTTTAGTTTCTCCTTGAGT 57.480 30.769 0.00 0.00 0.00 3.41
6417 8737 9.621629 TTTGTCATTTTAGTTTCTCCTTGAGTA 57.378 29.630 0.00 0.00 0.00 2.59
6418 8738 9.793259 TTGTCATTTTAGTTTCTCCTTGAGTAT 57.207 29.630 0.00 0.00 0.00 2.12
6419 8739 9.793259 TGTCATTTTAGTTTCTCCTTGAGTATT 57.207 29.630 0.00 0.00 0.00 1.89
6422 8742 9.760660 CATTTTAGTTTCTCCTTGAGTATTTCG 57.239 33.333 0.00 0.00 0.00 3.46
6423 8743 9.720769 ATTTTAGTTTCTCCTTGAGTATTTCGA 57.279 29.630 0.00 0.00 0.00 3.71
6424 8744 9.550406 TTTTAGTTTCTCCTTGAGTATTTCGAA 57.450 29.630 0.00 0.00 0.00 3.71
6425 8745 9.720769 TTTAGTTTCTCCTTGAGTATTTCGAAT 57.279 29.630 0.00 0.00 0.00 3.34
6426 8746 9.720769 TTAGTTTCTCCTTGAGTATTTCGAATT 57.279 29.630 0.00 0.00 0.00 2.17
6427 8747 8.622948 AGTTTCTCCTTGAGTATTTCGAATTT 57.377 30.769 0.00 0.00 0.00 1.82
6428 8748 8.722394 AGTTTCTCCTTGAGTATTTCGAATTTC 58.278 33.333 0.00 0.00 0.00 2.17
6429 8749 6.887376 TCTCCTTGAGTATTTCGAATTTCG 57.113 37.500 12.54 12.54 42.10 3.46
6461 8781 4.829872 TTTAGGGGTTGTCGACATATGT 57.170 40.909 20.80 8.43 0.00 2.29
6462 8782 2.691409 AGGGGTTGTCGACATATGTG 57.309 50.000 20.80 6.04 0.00 3.21
6463 8783 2.184533 AGGGGTTGTCGACATATGTGA 58.815 47.619 20.80 8.39 0.00 3.58
6464 8784 2.771943 AGGGGTTGTCGACATATGTGAT 59.228 45.455 20.80 0.00 0.00 3.06
6465 8785 2.872245 GGGGTTGTCGACATATGTGATG 59.128 50.000 20.80 3.01 0.00 3.07
6466 8786 3.531538 GGGTTGTCGACATATGTGATGT 58.468 45.455 20.80 0.00 34.52 3.06
6467 8787 3.309682 GGGTTGTCGACATATGTGATGTG 59.690 47.826 20.80 0.00 31.52 3.21
6468 8788 4.180817 GGTTGTCGACATATGTGATGTGA 58.819 43.478 20.80 0.00 31.52 3.58
6469 8789 4.629634 GGTTGTCGACATATGTGATGTGAA 59.370 41.667 20.80 0.00 31.52 3.18
6470 8790 5.445939 GGTTGTCGACATATGTGATGTGAAC 60.446 44.000 20.80 9.27 31.52 3.18
6471 8791 4.180817 TGTCGACATATGTGATGTGAACC 58.819 43.478 15.76 0.00 31.52 3.62
6472 8792 4.081697 TGTCGACATATGTGATGTGAACCT 60.082 41.667 15.76 0.00 31.52 3.50
6473 8793 4.504461 GTCGACATATGTGATGTGAACCTC 59.496 45.833 14.43 0.00 31.52 3.85
6474 8794 3.804325 CGACATATGTGATGTGAACCTCC 59.196 47.826 14.43 0.00 31.52 4.30
6475 8795 4.680440 CGACATATGTGATGTGAACCTCCA 60.680 45.833 14.43 0.00 31.52 3.86
6476 8796 5.371526 GACATATGTGATGTGAACCTCCAT 58.628 41.667 14.43 0.00 31.52 3.41
6477 8797 5.128205 ACATATGTGATGTGAACCTCCATG 58.872 41.667 7.78 0.00 0.00 3.66
6478 8798 5.104402 ACATATGTGATGTGAACCTCCATGA 60.104 40.000 7.78 0.00 0.00 3.07
6479 8799 4.515028 ATGTGATGTGAACCTCCATGAT 57.485 40.909 0.00 0.00 0.00 2.45
6480 8800 4.305539 TGTGATGTGAACCTCCATGATT 57.694 40.909 0.00 0.00 0.00 2.57
6481 8801 4.665451 TGTGATGTGAACCTCCATGATTT 58.335 39.130 0.00 0.00 0.00 2.17
6482 8802 5.078949 TGTGATGTGAACCTCCATGATTTT 58.921 37.500 0.00 0.00 0.00 1.82
6483 8803 5.539574 TGTGATGTGAACCTCCATGATTTTT 59.460 36.000 0.00 0.00 0.00 1.94
6540 8860 9.860650 ATTTTATAAGTTGGTATCATGGTAGCA 57.139 29.630 13.80 13.80 0.00 3.49
6541 8861 9.860650 TTTTATAAGTTGGTATCATGGTAGCAT 57.139 29.630 18.10 6.84 32.69 3.79
6542 8862 9.502091 TTTATAAGTTGGTATCATGGTAGCATC 57.498 33.333 18.10 16.61 32.69 3.91
6543 8863 5.636903 AAGTTGGTATCATGGTAGCATCT 57.363 39.130 18.10 18.44 35.03 2.90
6544 8864 6.747414 AAGTTGGTATCATGGTAGCATCTA 57.253 37.500 22.70 6.58 33.40 1.98
6545 8865 6.747414 AGTTGGTATCATGGTAGCATCTAA 57.253 37.500 21.62 5.30 33.01 2.10
6546 8866 6.763355 AGTTGGTATCATGGTAGCATCTAAG 58.237 40.000 21.62 0.00 33.01 2.18
6547 8867 5.745312 TGGTATCATGGTAGCATCTAAGG 57.255 43.478 13.80 0.00 0.00 2.69
6548 8868 5.402630 TGGTATCATGGTAGCATCTAAGGA 58.597 41.667 13.80 0.00 0.00 3.36
6549 8869 5.481824 TGGTATCATGGTAGCATCTAAGGAG 59.518 44.000 13.80 0.00 0.00 3.69
6550 8870 5.482175 GGTATCATGGTAGCATCTAAGGAGT 59.518 44.000 10.32 0.00 0.00 3.85
6551 8871 4.944619 TCATGGTAGCATCTAAGGAGTG 57.055 45.455 3.96 0.00 0.00 3.51
6552 8872 3.643320 TCATGGTAGCATCTAAGGAGTGG 59.357 47.826 3.96 0.00 0.00 4.00
6553 8873 3.116096 TGGTAGCATCTAAGGAGTGGT 57.884 47.619 0.00 0.00 0.00 4.16
6554 8874 4.259933 TGGTAGCATCTAAGGAGTGGTA 57.740 45.455 0.00 0.00 0.00 3.25
6555 8875 4.816126 TGGTAGCATCTAAGGAGTGGTAT 58.184 43.478 0.00 0.00 0.00 2.73
6556 8876 4.833380 TGGTAGCATCTAAGGAGTGGTATC 59.167 45.833 0.00 0.00 0.00 2.24
6557 8877 4.833380 GGTAGCATCTAAGGAGTGGTATCA 59.167 45.833 0.00 0.00 29.76 2.15
6558 8878 5.482175 GGTAGCATCTAAGGAGTGGTATCAT 59.518 44.000 0.00 0.00 29.76 2.45
6559 8879 5.480642 AGCATCTAAGGAGTGGTATCATG 57.519 43.478 0.00 0.00 0.00 3.07
6560 8880 4.904251 AGCATCTAAGGAGTGGTATCATGT 59.096 41.667 0.00 0.00 0.00 3.21
6561 8881 4.993584 GCATCTAAGGAGTGGTATCATGTG 59.006 45.833 0.00 0.00 0.00 3.21
6562 8882 5.221521 GCATCTAAGGAGTGGTATCATGTGA 60.222 44.000 0.00 0.00 0.00 3.58
6563 8883 6.519721 GCATCTAAGGAGTGGTATCATGTGAT 60.520 42.308 0.68 0.68 38.51 3.06
6564 8884 7.310052 GCATCTAAGGAGTGGTATCATGTGATA 60.310 40.741 0.00 0.00 36.05 2.15
6575 8895 3.281727 TCATGTGATACTTTCCCCTGC 57.718 47.619 0.00 0.00 0.00 4.85
6576 8896 2.092429 TCATGTGATACTTTCCCCTGCC 60.092 50.000 0.00 0.00 0.00 4.85
6577 8897 1.367346 TGTGATACTTTCCCCTGCCA 58.633 50.000 0.00 0.00 0.00 4.92
6578 8898 1.281867 TGTGATACTTTCCCCTGCCAG 59.718 52.381 0.00 0.00 0.00 4.85
6599 8919 1.601419 GCCCGAGTGCCACTGTACTA 61.601 60.000 0.00 0.00 37.57 1.82
6661 8981 5.295540 GTCATTCTAAAGCTCATCTCCAACC 59.704 44.000 0.00 0.00 0.00 3.77
6674 8994 2.107552 TCTCCAACCGGAACCTCAAAAT 59.892 45.455 9.46 0.00 42.21 1.82
6712 9032 0.460109 CGAGTTGTCCGGATGATGCA 60.460 55.000 7.81 0.00 0.00 3.96
6724 9044 3.113745 GATGCAAGCCATCCACCG 58.886 61.111 0.00 0.00 43.72 4.94
6725 9045 1.750399 GATGCAAGCCATCCACCGT 60.750 57.895 0.00 0.00 43.72 4.83
6732 9053 2.666098 GCCATCCACCGTGGTACCT 61.666 63.158 17.32 0.00 39.03 3.08
6741 9062 1.396653 CCGTGGTACCTTATCGGTCT 58.603 55.000 14.36 0.00 44.93 3.85
6747 9068 5.527033 GTGGTACCTTATCGGTCTATGAAC 58.473 45.833 14.36 0.00 44.93 3.18
6748 9069 4.276678 TGGTACCTTATCGGTCTATGAACG 59.723 45.833 14.36 0.00 44.93 3.95
6752 9073 4.201990 ACCTTATCGGTCTATGAACGTGTC 60.202 45.833 4.93 0.00 44.93 3.67
6753 9074 4.036498 CCTTATCGGTCTATGAACGTGTCT 59.964 45.833 4.93 0.00 43.81 3.41
6780 9101 3.004315 GTCCGAAATCAAGCAAACCAGAA 59.996 43.478 0.00 0.00 0.00 3.02
6787 9108 2.760092 TCAAGCAAACCAGAAGCAAACT 59.240 40.909 0.00 0.00 0.00 2.66
6791 9112 2.884639 GCAAACCAGAAGCAAACTAGGA 59.115 45.455 0.00 0.00 0.00 2.94
6804 9125 1.867363 ACTAGGAGAGATTTGCGGGT 58.133 50.000 0.00 0.00 0.00 5.28
6821 9145 3.632080 TGTCCGGGCCATCACGTT 61.632 61.111 2.12 0.00 0.00 3.99
6832 9156 3.927163 ATCACGTTCGCCGACACCC 62.927 63.158 0.00 0.00 40.70 4.61
6857 9181 1.004277 TCCACCCAAAAAGATCTCCCG 59.996 52.381 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.031013 AGGTTTGTGCTTTAGGTGCTTT 58.969 40.909 0.00 0.00 0.00 3.51
48 49 1.615392 GAGATGGCAGGTTTGTGCTTT 59.385 47.619 0.00 0.00 43.45 3.51
246 247 4.140599 CTCGAGCTCGGCAGGCTT 62.141 66.667 33.98 0.00 40.40 4.35
251 252 1.899054 CCTATCCTCGAGCTCGGCA 60.899 63.158 33.98 19.06 40.29 5.69
322 323 3.062466 TGACGAGTCCCTGCTCCG 61.062 66.667 0.34 0.00 32.11 4.63
364 365 3.710722 CCTCCAACCCGCTGCTCT 61.711 66.667 0.00 0.00 0.00 4.09
372 373 1.677637 CTCCGCTAGTCCTCCAACCC 61.678 65.000 0.00 0.00 0.00 4.11
553 554 7.504911 AGCTGGCATAACATCTTGAGATTTAAT 59.495 33.333 0.00 0.00 31.21 1.40
576 577 1.608283 GCACCTTCAACGGACTTAGCT 60.608 52.381 0.00 0.00 0.00 3.32
588 589 7.509318 ACAATACTACCTATATGAGCACCTTCA 59.491 37.037 0.00 0.00 0.00 3.02
592 593 7.931948 ACAAACAATACTACCTATATGAGCACC 59.068 37.037 0.00 0.00 0.00 5.01
593 594 8.765219 CACAAACAATACTACCTATATGAGCAC 58.235 37.037 0.00 0.00 0.00 4.40
602 603 3.680937 GCACGCACAAACAATACTACCTA 59.319 43.478 0.00 0.00 0.00 3.08
603 604 2.482721 GCACGCACAAACAATACTACCT 59.517 45.455 0.00 0.00 0.00 3.08
626 627 3.144506 GAGCATACATTCACCCCATGAG 58.855 50.000 0.00 0.00 38.99 2.90
634 635 4.025730 CACATACACCGAGCATACATTCAC 60.026 45.833 0.00 0.00 0.00 3.18
693 695 5.527582 GCTTATTTGGCTATCCGAAGAAGAA 59.472 40.000 19.61 0.04 42.14 2.52
694 696 5.057149 GCTTATTTGGCTATCCGAAGAAGA 58.943 41.667 19.61 0.00 42.14 2.87
695 697 4.816385 TGCTTATTTGGCTATCCGAAGAAG 59.184 41.667 13.44 13.44 42.14 2.85
826 829 9.727859 AAAAATAATTTAACCGGTTATTTGGCT 57.272 25.926 27.03 8.31 37.80 4.75
972 975 1.028905 TGGTTGGTTTTCTTGCGAGG 58.971 50.000 0.00 0.00 0.00 4.63
1589 1592 0.886938 TTGAGATTGGTGCCGCGAAA 60.887 50.000 8.23 0.00 0.00 3.46
1625 1628 2.029073 CTTGCCACGTGACTCGGT 59.971 61.111 19.30 0.00 44.69 4.69
1627 1630 2.356313 AGCTTGCCACGTGACTCG 60.356 61.111 19.30 0.29 46.00 4.18
1678 1681 2.139917 TGTGCGTCCATTCTGTGTTAC 58.860 47.619 0.00 0.00 0.00 2.50
1704 1707 9.998106 GTATTCTTTATCTAACCAATCAGCCTA 57.002 33.333 0.00 0.00 0.00 3.93
1705 1708 8.718656 AGTATTCTTTATCTAACCAATCAGCCT 58.281 33.333 0.00 0.00 0.00 4.58
1719 1722 7.772332 TTTGCGAGGAAGAGTATTCTTTATC 57.228 36.000 1.61 3.26 43.63 1.75
1720 1723 8.561738 TTTTTGCGAGGAAGAGTATTCTTTAT 57.438 30.769 1.61 0.00 43.63 1.40
1721 1724 7.972832 TTTTTGCGAGGAAGAGTATTCTTTA 57.027 32.000 1.61 0.00 43.63 1.85
1722 1725 6.877611 TTTTTGCGAGGAAGAGTATTCTTT 57.122 33.333 1.61 0.00 43.63 2.52
1749 2149 7.849904 TGGGGGTTAGAGTAATCTTTATCTTCT 59.150 37.037 0.00 0.00 0.00 2.85
1750 2150 8.030913 TGGGGGTTAGAGTAATCTTTATCTTC 57.969 38.462 0.00 0.00 0.00 2.87
1751 2151 8.401955 TTGGGGGTTAGAGTAATCTTTATCTT 57.598 34.615 0.00 0.00 0.00 2.40
1889 2299 0.508641 GTGCAACAGTAGAGTGCACG 59.491 55.000 12.01 0.00 44.67 5.34
1926 2336 6.095021 CACCACTTGATGCTAGTACTACTGTA 59.905 42.308 0.00 0.00 0.00 2.74
1927 2337 5.017490 ACCACTTGATGCTAGTACTACTGT 58.983 41.667 0.00 0.00 0.00 3.55
1928 2338 5.105716 ACACCACTTGATGCTAGTACTACTG 60.106 44.000 0.00 0.00 0.00 2.74
1936 2346 2.768253 TCCACACCACTTGATGCTAG 57.232 50.000 0.00 0.00 0.00 3.42
2014 2455 2.498077 GCCTTTTCCTGGCTCATCC 58.502 57.895 0.00 0.00 46.38 3.51
2026 2467 2.612721 GCATCCGGATTGTTTGCCTTTT 60.613 45.455 16.19 0.00 0.00 2.27
2174 2616 2.576615 GGCTGAACTGAAACCAAGTCT 58.423 47.619 0.00 0.00 0.00 3.24
2236 2678 6.385467 GGGAGTATATTTGGCTCCTAGATGAT 59.615 42.308 9.33 0.00 45.91 2.45
2255 2697 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2256 2698 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
2257 2699 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2258 2700 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2259 2701 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2260 2702 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2261 2703 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2262 2704 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
2263 2705 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2275 2717 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
2276 2718 8.954350 ACTACTTTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 40.05 2.10
2277 2719 7.828712 ACTACTTTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 40.05 2.85
2278 2720 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
2310 2752 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
2312 2754 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
2324 2766 9.933723 TGTTTACTTAATACTCCCTCTGTAAAC 57.066 33.333 14.55 14.55 43.75 2.01
2325 2767 9.933723 GTGTTTACTTAATACTCCCTCTGTAAA 57.066 33.333 0.00 0.00 0.00 2.01
2326 2768 8.534496 GGTGTTTACTTAATACTCCCTCTGTAA 58.466 37.037 0.00 0.00 0.00 2.41
2327 2769 7.124750 GGGTGTTTACTTAATACTCCCTCTGTA 59.875 40.741 0.00 0.00 40.67 2.74
2328 2770 6.070366 GGGTGTTTACTTAATACTCCCTCTGT 60.070 42.308 0.00 0.00 40.67 3.41
2329 2771 6.346896 GGGTGTTTACTTAATACTCCCTCTG 58.653 44.000 0.00 0.00 40.67 3.35
2330 2772 5.427806 GGGGTGTTTACTTAATACTCCCTCT 59.572 44.000 0.00 0.00 41.40 3.69
2331 2773 5.190330 TGGGGTGTTTACTTAATACTCCCTC 59.810 44.000 0.00 0.00 45.39 4.30
2332 2774 5.102967 TGGGGTGTTTACTTAATACTCCCT 58.897 41.667 0.00 0.00 45.39 4.20
2333 2775 5.440207 TGGGGTGTTTACTTAATACTCCC 57.560 43.478 0.00 0.00 45.39 4.30
2334 2776 7.395206 ACATTTGGGGTGTTTACTTAATACTCC 59.605 37.037 0.00 0.00 45.99 3.85
2335 2777 8.241367 CACATTTGGGGTGTTTACTTAATACTC 58.759 37.037 0.00 0.00 0.00 2.59
2336 2778 7.945664 TCACATTTGGGGTGTTTACTTAATACT 59.054 33.333 0.00 0.00 37.52 2.12
2337 2779 8.113173 TCACATTTGGGGTGTTTACTTAATAC 57.887 34.615 0.00 0.00 37.52 1.89
2404 2849 3.209410 CACCAACTCATTCCTATCTGCC 58.791 50.000 0.00 0.00 0.00 4.85
2510 2972 6.348786 GCTGAGATCTGATTAGCTAGAGACAG 60.349 46.154 0.00 0.00 0.00 3.51
2511 2973 5.473162 GCTGAGATCTGATTAGCTAGAGACA 59.527 44.000 0.00 0.00 0.00 3.41
2512 2974 5.390885 CGCTGAGATCTGATTAGCTAGAGAC 60.391 48.000 0.00 0.00 32.43 3.36
2513 2975 4.694982 CGCTGAGATCTGATTAGCTAGAGA 59.305 45.833 0.00 0.00 32.43 3.10
2514 2976 4.455533 ACGCTGAGATCTGATTAGCTAGAG 59.544 45.833 0.00 0.00 32.43 2.43
2515 2977 4.215185 CACGCTGAGATCTGATTAGCTAGA 59.785 45.833 0.00 0.00 32.43 2.43
2516 2978 4.023279 ACACGCTGAGATCTGATTAGCTAG 60.023 45.833 0.00 3.04 32.43 3.42
2517 2979 3.885901 ACACGCTGAGATCTGATTAGCTA 59.114 43.478 0.00 0.00 32.43 3.32
2518 2980 2.692557 ACACGCTGAGATCTGATTAGCT 59.307 45.455 0.00 0.00 32.43 3.32
2519 2981 3.090952 ACACGCTGAGATCTGATTAGC 57.909 47.619 0.00 3.91 0.00 3.09
2520 2982 7.307042 CCAAATTACACGCTGAGATCTGATTAG 60.307 40.741 0.00 0.00 0.00 1.73
2521 2983 6.479990 CCAAATTACACGCTGAGATCTGATTA 59.520 38.462 0.00 0.00 0.00 1.75
2610 3072 1.200483 CAGCACTGTCGCGTATTAGG 58.800 55.000 5.77 0.00 36.85 2.69
2629 3094 2.634940 TGAGCTGCTAACCCCAGATATC 59.365 50.000 0.15 0.00 32.03 1.63
2651 3116 3.157087 CCACCAAGAAGCCAACAACTAT 58.843 45.455 0.00 0.00 0.00 2.12
2684 3149 1.261480 CAGTGTCCCTGACTAGCTGT 58.739 55.000 0.00 0.00 44.49 4.40
2686 3151 1.620819 CAACAGTGTCCCTGACTAGCT 59.379 52.381 0.00 0.00 44.49 3.32
2692 3157 2.425592 CGGCAACAGTGTCCCTGA 59.574 61.111 0.00 0.00 44.49 3.86
2696 3161 1.078426 ATAGGCGGCAACAGTGTCC 60.078 57.895 13.08 0.00 0.00 4.02
2725 3190 7.170998 GCGGCAGTAGTACTTATATTCATTGTT 59.829 37.037 0.00 0.00 0.00 2.83
2738 3203 1.263356 TTGAAGGCGGCAGTAGTACT 58.737 50.000 13.08 0.00 0.00 2.73
2747 3214 2.622546 TAAAAACGATTGAAGGCGGC 57.377 45.000 0.00 0.00 0.00 6.53
2749 3216 4.778904 TGTCTTAAAAACGATTGAAGGCG 58.221 39.130 0.00 0.00 0.00 5.52
2849 4813 8.755941 ACTACATCATTGTTTAATCTCGAATCG 58.244 33.333 0.00 0.00 37.28 3.34
2874 4838 6.979238 ACGCAATAACTCCTTGATCTTACTAC 59.021 38.462 0.00 0.00 0.00 2.73
2877 4841 6.979238 AGTACGCAATAACTCCTTGATCTTAC 59.021 38.462 0.00 0.00 0.00 2.34
2880 4844 5.352284 CAGTACGCAATAACTCCTTGATCT 58.648 41.667 0.00 0.00 0.00 2.75
2882 4846 4.161565 TCCAGTACGCAATAACTCCTTGAT 59.838 41.667 0.00 0.00 0.00 2.57
2883 4847 3.512329 TCCAGTACGCAATAACTCCTTGA 59.488 43.478 0.00 0.00 0.00 3.02
2884 4848 3.617263 GTCCAGTACGCAATAACTCCTTG 59.383 47.826 0.00 0.00 0.00 3.61
2941 5225 4.252878 TGTCATGTCAAGTTACGATGCAT 58.747 39.130 0.00 0.00 0.00 3.96
2968 5252 4.217767 GGATGGATGATGTACTACGTGCTA 59.782 45.833 0.00 0.00 0.00 3.49
3028 5322 2.087009 GCACGGATATCTACGCGGC 61.087 63.158 12.47 3.24 0.00 6.53
3055 5349 1.988107 TCCAAGCAAGAGGAATCTGGT 59.012 47.619 0.00 0.00 0.00 4.00
3072 5366 9.748708 CAAATGTGAAAGAAAAATACTTCTCCA 57.251 29.630 0.00 0.00 34.49 3.86
3116 5410 5.376854 AGATCAAAATTTCTGACAACCGG 57.623 39.130 0.00 0.00 0.00 5.28
3154 5452 8.612619 CGTATGTATTGCTCCTACTTCAAAAAT 58.387 33.333 0.00 0.00 0.00 1.82
3170 5468 8.600625 CGAAATATAATGGGGACGTATGTATTG 58.399 37.037 0.00 0.00 0.00 1.90
3342 5642 6.355144 CGTTCGGTTTATTTGTAACTTGTGTC 59.645 38.462 0.00 0.00 0.00 3.67
3349 5649 4.385379 CGACCGTTCGGTTTATTTGTAAC 58.615 43.478 17.90 0.95 41.89 2.50
3354 5654 1.461897 CTGCGACCGTTCGGTTTATTT 59.538 47.619 17.90 0.00 45.98 1.40
3366 5666 0.456221 AGAGAATGGTACTGCGACCG 59.544 55.000 0.00 0.00 42.99 4.79
3367 5667 1.751924 AGAGAGAATGGTACTGCGACC 59.248 52.381 0.00 0.00 40.21 4.79
3369 5669 3.849911 CAAAGAGAGAATGGTACTGCGA 58.150 45.455 0.00 0.00 0.00 5.10
3370 5670 2.349886 GCAAAGAGAGAATGGTACTGCG 59.650 50.000 0.00 0.00 0.00 5.18
3384 5695 3.436704 TGCTCGAAAGTTATGGCAAAGAG 59.563 43.478 0.00 0.00 0.00 2.85
3394 5705 5.804692 TTGTGTCTTTTGCTCGAAAGTTA 57.195 34.783 8.89 0.00 37.76 2.24
3397 5708 6.253298 TCAAATTTGTGTCTTTTGCTCGAAAG 59.747 34.615 17.47 3.72 37.85 2.62
3427 5738 6.166984 TCAATTTGTGAATAGTTTTGCCCA 57.833 33.333 0.00 0.00 31.51 5.36
3459 5770 8.787852 GGGGTCAGCTAGATGAAATATTAAAAG 58.212 37.037 13.19 0.00 0.00 2.27
3460 5771 8.502738 AGGGGTCAGCTAGATGAAATATTAAAA 58.497 33.333 13.19 0.00 0.00 1.52
3461 5772 8.045720 AGGGGTCAGCTAGATGAAATATTAAA 57.954 34.615 13.19 0.00 0.00 1.52
3462 5773 7.633018 AGGGGTCAGCTAGATGAAATATTAA 57.367 36.000 13.19 0.00 0.00 1.40
3463 5774 8.736097 TTAGGGGTCAGCTAGATGAAATATTA 57.264 34.615 13.19 0.00 0.00 0.98
3464 5775 7.633018 TTAGGGGTCAGCTAGATGAAATATT 57.367 36.000 13.19 0.70 0.00 1.28
3465 5776 7.238514 ACATTAGGGGTCAGCTAGATGAAATAT 59.761 37.037 13.19 2.41 0.00 1.28
3475 5786 2.698797 GCTGTACATTAGGGGTCAGCTA 59.301 50.000 0.00 0.00 42.98 3.32
3480 5791 0.532196 GGCGCTGTACATTAGGGGTC 60.532 60.000 7.64 0.00 0.00 4.46
3492 5803 2.100197 TGTCTTACTATCAGGCGCTGT 58.900 47.619 7.64 0.00 32.61 4.40
3506 5817 3.428999 GCGCAATAGAGTGGAGTGTCTTA 60.429 47.826 0.30 0.00 0.00 2.10
3510 5821 0.108138 GGCGCAATAGAGTGGAGTGT 60.108 55.000 10.83 0.00 0.00 3.55
3512 5823 1.141881 CGGCGCAATAGAGTGGAGT 59.858 57.895 10.83 0.00 0.00 3.85
3515 5826 3.630148 CGCGGCGCAATAGAGTGG 61.630 66.667 32.61 8.04 0.00 4.00
3526 5841 2.431539 CTAAGTATTAGGCGCGGCG 58.568 57.895 27.74 19.62 44.84 6.46
3553 5868 0.179094 TAACATCTAACTGCCGGGCG 60.179 55.000 15.40 11.70 0.00 6.13
3556 5871 3.247006 AGTGTAACATCTAACTGCCGG 57.753 47.619 0.00 0.00 41.43 6.13
3559 5874 7.456253 CACAATGTAGTGTAACATCTAACTGC 58.544 38.462 0.00 0.00 39.16 4.40
3563 5878 7.971183 TTGCACAATGTAGTGTAACATCTAA 57.029 32.000 0.00 0.00 39.16 2.10
3572 5887 2.833794 AGACGTTGCACAATGTAGTGT 58.166 42.857 8.17 0.00 40.35 3.55
3587 5902 1.216710 GCTCCTTGCAGCTAGACGT 59.783 57.895 5.30 0.00 42.31 4.34
3588 5903 4.100981 GCTCCTTGCAGCTAGACG 57.899 61.111 5.30 0.00 42.31 4.18
3598 5913 2.676839 CAATCTACTGTGCAGCTCCTTG 59.323 50.000 0.00 0.00 0.00 3.61
3600 5915 1.406614 GCAATCTACTGTGCAGCTCCT 60.407 52.381 0.00 0.00 40.58 3.69
3613 5928 1.138859 ACAGTATGGCGCTGCAATCTA 59.861 47.619 7.64 0.00 43.62 1.98
3614 5929 0.107508 ACAGTATGGCGCTGCAATCT 60.108 50.000 7.64 0.00 43.62 2.40
3615 5930 0.305922 GACAGTATGGCGCTGCAATC 59.694 55.000 7.64 0.00 43.62 2.67
3616 5931 2.397751 GACAGTATGGCGCTGCAAT 58.602 52.632 7.64 0.00 43.62 3.56
3617 5932 3.889227 GACAGTATGGCGCTGCAA 58.111 55.556 7.64 0.00 43.62 4.08
3624 5939 2.436087 ATAGCGCCCGACAGTATGGC 62.436 60.000 2.29 3.13 44.64 4.40
3625 5940 0.885879 TATAGCGCCCGACAGTATGG 59.114 55.000 2.29 0.00 43.62 2.74
3626 5941 2.717580 TTATAGCGCCCGACAGTATG 57.282 50.000 2.29 0.00 46.00 2.39
3627 5942 3.738830 TTTTATAGCGCCCGACAGTAT 57.261 42.857 2.29 0.00 0.00 2.12
3628 5943 3.450578 CTTTTTATAGCGCCCGACAGTA 58.549 45.455 2.29 0.00 0.00 2.74
3629 5944 2.277084 CTTTTTATAGCGCCCGACAGT 58.723 47.619 2.29 0.00 0.00 3.55
3630 5945 1.597663 CCTTTTTATAGCGCCCGACAG 59.402 52.381 2.29 0.00 0.00 3.51
3631 5946 1.207570 TCCTTTTTATAGCGCCCGACA 59.792 47.619 2.29 0.00 0.00 4.35
3632 5947 1.944032 TCCTTTTTATAGCGCCCGAC 58.056 50.000 2.29 0.00 0.00 4.79
3633 5948 2.103432 TGATCCTTTTTATAGCGCCCGA 59.897 45.455 2.29 0.00 0.00 5.14
3634 5949 2.489971 TGATCCTTTTTATAGCGCCCG 58.510 47.619 2.29 0.00 0.00 6.13
3635 5950 3.253432 CCTTGATCCTTTTTATAGCGCCC 59.747 47.826 2.29 0.00 0.00 6.13
3676 5991 8.325282 GCAAAAGTATTTCACAAACCAAACTAC 58.675 33.333 0.00 0.00 37.28 2.73
3684 5999 7.621102 CCTCAAAGCAAAAGTATTTCACAAAC 58.379 34.615 0.00 0.00 37.28 2.93
3710 6025 9.694137 AAAATTGTGGCAAAATTGATAATTTGG 57.306 25.926 16.10 0.00 40.05 3.28
4585 6901 2.733593 GCGCCGTCGTTCTTGAGT 60.734 61.111 0.00 0.00 38.14 3.41
4904 7220 2.347490 GCGACCAGGAAGGAGCAA 59.653 61.111 0.00 0.00 41.66 3.91
5086 7402 0.458025 GGTGACCGAAGATCACGTCC 60.458 60.000 10.44 5.14 35.41 4.79
5089 7405 0.038618 TGTGGTGACCGAAGATCACG 60.039 55.000 0.00 0.00 35.41 4.35
5092 7408 1.439679 GGTTGTGGTGACCGAAGATC 58.560 55.000 0.00 0.00 0.00 2.75
5182 7498 5.359756 GTCTCCTTGCTTCAATTTTTGGTT 58.640 37.500 0.00 0.00 0.00 3.67
5248 7564 1.003112 GGTACCATGTCACCGGCAA 60.003 57.895 7.15 0.00 0.00 4.52
5334 7650 2.896854 CGATACGTCCGTCCGGGA 60.897 66.667 0.00 0.00 44.68 5.14
5440 7756 2.281484 GGCAAGCTGGACGGTGAA 60.281 61.111 0.00 0.00 0.00 3.18
5923 8242 3.189285 GCACCATGAAAATCCAATTCCG 58.811 45.455 0.00 0.00 0.00 4.30
6001 8320 3.920446 TGCAGTGCGTAGAACAATTCTA 58.080 40.909 11.20 0.00 41.14 2.10
6002 8321 2.766313 TGCAGTGCGTAGAACAATTCT 58.234 42.857 11.20 0.00 43.72 2.40
6003 8322 3.536158 TTGCAGTGCGTAGAACAATTC 57.464 42.857 11.20 0.00 0.00 2.17
6040 8359 7.542025 AGAAACAATGATTCTTTGTATGGCTC 58.458 34.615 15.80 9.34 36.32 4.70
6044 8363 9.994432 GAGGTAGAAACAATGATTCTTTGTATG 57.006 33.333 10.94 0.00 38.13 2.39
6162 8482 7.670364 CATGTAAGGAGTGGTATCATGTGATA 58.330 38.462 0.00 0.00 36.05 2.15
6163 8483 6.528321 CATGTAAGGAGTGGTATCATGTGAT 58.472 40.000 0.68 0.68 38.51 3.06
6164 8484 5.684813 GCATGTAAGGAGTGGTATCATGTGA 60.685 44.000 0.00 0.00 35.25 3.58
6165 8485 4.512944 GCATGTAAGGAGTGGTATCATGTG 59.487 45.833 0.00 0.00 35.25 3.21
6166 8486 4.410228 AGCATGTAAGGAGTGGTATCATGT 59.590 41.667 0.00 0.00 35.25 3.21
6167 8487 4.965814 AGCATGTAAGGAGTGGTATCATG 58.034 43.478 0.00 0.00 35.69 3.07
6168 8488 5.012148 GGTAGCATGTAAGGAGTGGTATCAT 59.988 44.000 0.00 0.00 29.76 2.45
6169 8489 4.344102 GGTAGCATGTAAGGAGTGGTATCA 59.656 45.833 0.00 0.00 29.76 2.15
6170 8490 4.344102 TGGTAGCATGTAAGGAGTGGTATC 59.656 45.833 0.00 0.00 0.00 2.24
6171 8491 4.295201 TGGTAGCATGTAAGGAGTGGTAT 58.705 43.478 0.00 0.00 0.00 2.73
6172 8492 3.715287 TGGTAGCATGTAAGGAGTGGTA 58.285 45.455 0.00 0.00 0.00 3.25
6173 8493 2.546899 TGGTAGCATGTAAGGAGTGGT 58.453 47.619 0.00 0.00 0.00 4.16
6174 8494 3.134623 TCATGGTAGCATGTAAGGAGTGG 59.865 47.826 28.83 5.21 34.39 4.00
6175 8495 4.406648 TCATGGTAGCATGTAAGGAGTG 57.593 45.455 28.83 7.33 34.39 3.51
6176 8496 5.012148 GGTATCATGGTAGCATGTAAGGAGT 59.988 44.000 28.83 13.07 34.39 3.85
6177 8497 5.012046 TGGTATCATGGTAGCATGTAAGGAG 59.988 44.000 28.83 7.22 34.39 3.69
6178 8498 4.904853 TGGTATCATGGTAGCATGTAAGGA 59.095 41.667 28.83 13.88 34.39 3.36
6179 8499 5.227569 TGGTATCATGGTAGCATGTAAGG 57.772 43.478 28.83 8.56 34.39 2.69
6180 8500 6.291377 AGTTGGTATCATGGTAGCATGTAAG 58.709 40.000 28.83 8.91 32.69 2.34
6181 8501 6.247229 AGTTGGTATCATGGTAGCATGTAA 57.753 37.500 28.83 17.88 32.69 2.41
6182 8502 5.887214 AGTTGGTATCATGGTAGCATGTA 57.113 39.130 28.83 19.15 32.69 2.29
6183 8503 4.778213 AGTTGGTATCATGGTAGCATGT 57.222 40.909 28.83 20.00 32.69 3.21
6184 8504 8.846943 TTATAAGTTGGTATCATGGTAGCATG 57.153 34.615 25.58 25.58 32.69 4.06
6185 8505 9.860650 TTTTATAAGTTGGTATCATGGTAGCAT 57.139 29.630 18.10 6.84 32.69 3.79
6186 8506 9.860650 ATTTTATAAGTTGGTATCATGGTAGCA 57.139 29.630 13.80 13.80 0.00 3.49
6243 8563 5.867903 TGTTGTGAACATCCCTGATTTTT 57.132 34.783 0.00 0.00 36.25 1.94
6287 8607 9.613428 TCCTGTATGTCGAATTTAAATCTGATT 57.387 29.630 0.10 0.00 0.00 2.57
6288 8608 9.613428 TTCCTGTATGTCGAATTTAAATCTGAT 57.387 29.630 0.10 0.00 0.00 2.90
6289 8609 9.098355 CTTCCTGTATGTCGAATTTAAATCTGA 57.902 33.333 0.10 0.00 0.00 3.27
6290 8610 9.098355 TCTTCCTGTATGTCGAATTTAAATCTG 57.902 33.333 0.10 0.00 0.00 2.90
6291 8611 9.319143 CTCTTCCTGTATGTCGAATTTAAATCT 57.681 33.333 0.10 0.00 0.00 2.40
6292 8612 9.314321 TCTCTTCCTGTATGTCGAATTTAAATC 57.686 33.333 0.10 0.00 0.00 2.17
6293 8613 9.667107 TTCTCTTCCTGTATGTCGAATTTAAAT 57.333 29.630 0.00 0.00 0.00 1.40
6294 8614 9.496873 TTTCTCTTCCTGTATGTCGAATTTAAA 57.503 29.630 0.00 0.00 0.00 1.52
6295 8615 8.932791 GTTTCTCTTCCTGTATGTCGAATTTAA 58.067 33.333 0.00 0.00 0.00 1.52
6296 8616 8.092068 TGTTTCTCTTCCTGTATGTCGAATTTA 58.908 33.333 0.00 0.00 0.00 1.40
6297 8617 6.934645 TGTTTCTCTTCCTGTATGTCGAATTT 59.065 34.615 0.00 0.00 0.00 1.82
6298 8618 6.464222 TGTTTCTCTTCCTGTATGTCGAATT 58.536 36.000 0.00 0.00 0.00 2.17
6299 8619 6.037786 TGTTTCTCTTCCTGTATGTCGAAT 57.962 37.500 0.00 0.00 0.00 3.34
6300 8620 5.462530 TGTTTCTCTTCCTGTATGTCGAA 57.537 39.130 0.00 0.00 0.00 3.71
6301 8621 5.462530 TTGTTTCTCTTCCTGTATGTCGA 57.537 39.130 0.00 0.00 0.00 4.20
6302 8622 6.539649 TTTTGTTTCTCTTCCTGTATGTCG 57.460 37.500 0.00 0.00 0.00 4.35
6323 8643 9.865321 CACTATTCATGATGGATTTGTCTTTTT 57.135 29.630 0.00 0.00 0.00 1.94
6324 8644 9.028284 ACACTATTCATGATGGATTTGTCTTTT 57.972 29.630 0.00 0.00 0.00 2.27
6325 8645 8.585471 ACACTATTCATGATGGATTTGTCTTT 57.415 30.769 0.00 0.00 0.00 2.52
6326 8646 7.830697 TGACACTATTCATGATGGATTTGTCTT 59.169 33.333 20.28 1.99 32.63 3.01
6327 8647 7.341030 TGACACTATTCATGATGGATTTGTCT 58.659 34.615 20.28 0.57 32.63 3.41
6328 8648 7.558161 TGACACTATTCATGATGGATTTGTC 57.442 36.000 15.95 15.95 0.00 3.18
6329 8649 7.943079 TTGACACTATTCATGATGGATTTGT 57.057 32.000 0.00 0.00 0.00 2.83
6330 8650 9.297586 CTTTTGACACTATTCATGATGGATTTG 57.702 33.333 0.00 0.00 0.00 2.32
6331 8651 9.246670 TCTTTTGACACTATTCATGATGGATTT 57.753 29.630 0.00 0.00 0.00 2.17
6332 8652 8.812513 TCTTTTGACACTATTCATGATGGATT 57.187 30.769 0.00 0.00 0.00 3.01
6333 8653 8.812513 TTCTTTTGACACTATTCATGATGGAT 57.187 30.769 0.00 0.00 0.00 3.41
6334 8654 8.102676 TCTTCTTTTGACACTATTCATGATGGA 58.897 33.333 0.00 0.00 0.00 3.41
6335 8655 8.180267 GTCTTCTTTTGACACTATTCATGATGG 58.820 37.037 0.00 0.00 34.80 3.51
6336 8656 8.724229 TGTCTTCTTTTGACACTATTCATGATG 58.276 33.333 0.00 0.00 39.23 3.07
6337 8657 8.853077 TGTCTTCTTTTGACACTATTCATGAT 57.147 30.769 0.00 0.00 39.23 2.45
6338 8658 8.675705 TTGTCTTCTTTTGACACTATTCATGA 57.324 30.769 0.00 0.00 43.13 3.07
6339 8659 7.536622 GCTTGTCTTCTTTTGACACTATTCATG 59.463 37.037 0.00 0.00 43.13 3.07
6340 8660 7.229306 TGCTTGTCTTCTTTTGACACTATTCAT 59.771 33.333 0.00 0.00 43.13 2.57
6341 8661 6.542005 TGCTTGTCTTCTTTTGACACTATTCA 59.458 34.615 0.00 0.00 43.13 2.57
6342 8662 6.959361 TGCTTGTCTTCTTTTGACACTATTC 58.041 36.000 0.00 0.00 43.13 1.75
6343 8663 6.767902 TCTGCTTGTCTTCTTTTGACACTATT 59.232 34.615 0.00 0.00 43.13 1.73
6344 8664 6.291377 TCTGCTTGTCTTCTTTTGACACTAT 58.709 36.000 0.00 0.00 43.13 2.12
6345 8665 5.670485 TCTGCTTGTCTTCTTTTGACACTA 58.330 37.500 0.00 0.00 43.13 2.74
6346 8666 4.517285 TCTGCTTGTCTTCTTTTGACACT 58.483 39.130 0.00 0.00 43.13 3.55
6347 8667 4.882671 TCTGCTTGTCTTCTTTTGACAC 57.117 40.909 0.00 0.00 43.13 3.67
6348 8668 5.895636 TTTCTGCTTGTCTTCTTTTGACA 57.104 34.783 0.00 0.00 41.94 3.58
6349 8669 5.174579 GCATTTCTGCTTGTCTTCTTTTGAC 59.825 40.000 0.00 0.00 45.32 3.18
6350 8670 5.284079 GCATTTCTGCTTGTCTTCTTTTGA 58.716 37.500 0.00 0.00 45.32 2.69
6351 8671 5.571778 GCATTTCTGCTTGTCTTCTTTTG 57.428 39.130 0.00 0.00 45.32 2.44
6364 8684 9.228454 TTCAGATGTGAATAGTGGCATTTCTGC 62.228 40.741 0.23 0.00 41.63 4.26
6365 8685 5.587443 TCAGATGTGAATAGTGGCATTTCTG 59.413 40.000 0.00 0.00 32.11 3.02
6366 8686 5.748402 TCAGATGTGAATAGTGGCATTTCT 58.252 37.500 0.00 0.00 0.00 2.52
6367 8687 6.441093 TTCAGATGTGAATAGTGGCATTTC 57.559 37.500 0.23 0.00 37.79 2.17
6385 8705 9.354673 AGGAGAAACTAAAATGACAAATTCAGA 57.645 29.630 0.00 0.00 37.77 3.27
6386 8706 9.971922 AAGGAGAAACTAAAATGACAAATTCAG 57.028 29.630 0.00 0.00 37.77 3.02
6387 8707 9.748708 CAAGGAGAAACTAAAATGACAAATTCA 57.251 29.630 0.00 0.00 39.11 2.57
6388 8708 9.965824 TCAAGGAGAAACTAAAATGACAAATTC 57.034 29.630 0.00 0.00 0.00 2.17
6389 8709 9.971922 CTCAAGGAGAAACTAAAATGACAAATT 57.028 29.630 0.00 0.00 0.00 1.82
6390 8710 9.136323 ACTCAAGGAGAAACTAAAATGACAAAT 57.864 29.630 0.00 0.00 33.32 2.32
6391 8711 8.519799 ACTCAAGGAGAAACTAAAATGACAAA 57.480 30.769 0.00 0.00 33.32 2.83
6392 8712 9.793259 ATACTCAAGGAGAAACTAAAATGACAA 57.207 29.630 0.00 0.00 33.32 3.18
6393 8713 9.793259 AATACTCAAGGAGAAACTAAAATGACA 57.207 29.630 0.00 0.00 33.32 3.58
6396 8716 9.760660 CGAAATACTCAAGGAGAAACTAAAATG 57.239 33.333 0.00 0.00 33.32 2.32
6397 8717 9.720769 TCGAAATACTCAAGGAGAAACTAAAAT 57.279 29.630 0.00 0.00 33.32 1.82
6398 8718 9.550406 TTCGAAATACTCAAGGAGAAACTAAAA 57.450 29.630 0.00 0.00 33.32 1.52
6399 8719 9.720769 ATTCGAAATACTCAAGGAGAAACTAAA 57.279 29.630 0.00 0.00 33.32 1.85
6400 8720 9.720769 AATTCGAAATACTCAAGGAGAAACTAA 57.279 29.630 0.00 0.00 33.32 2.24
6401 8721 9.720769 AAATTCGAAATACTCAAGGAGAAACTA 57.279 29.630 0.00 0.00 33.32 2.24
6402 8722 8.622948 AAATTCGAAATACTCAAGGAGAAACT 57.377 30.769 0.00 0.00 33.32 2.66
6403 8723 7.688578 CGAAATTCGAAATACTCAAGGAGAAAC 59.311 37.037 10.18 0.00 43.74 2.78
6404 8724 7.601130 TCGAAATTCGAAATACTCAAGGAGAAA 59.399 33.333 16.25 0.00 46.90 2.52
6405 8725 7.094631 TCGAAATTCGAAATACTCAAGGAGAA 58.905 34.615 16.25 0.00 46.90 2.87
6406 8726 6.627243 TCGAAATTCGAAATACTCAAGGAGA 58.373 36.000 16.25 0.00 46.90 3.71
6407 8727 6.887376 TCGAAATTCGAAATACTCAAGGAG 57.113 37.500 16.25 0.00 46.90 3.69
6438 8758 5.413213 CACATATGTCGACAACCCCTAAAAA 59.587 40.000 24.13 0.00 0.00 1.94
6439 8759 4.938832 CACATATGTCGACAACCCCTAAAA 59.061 41.667 24.13 0.00 0.00 1.52
6440 8760 4.223255 TCACATATGTCGACAACCCCTAAA 59.777 41.667 24.13 1.60 0.00 1.85
6441 8761 3.770388 TCACATATGTCGACAACCCCTAA 59.230 43.478 24.13 3.03 0.00 2.69
6442 8762 3.367321 TCACATATGTCGACAACCCCTA 58.633 45.455 24.13 10.40 0.00 3.53
6443 8763 2.184533 TCACATATGTCGACAACCCCT 58.815 47.619 24.13 8.19 0.00 4.79
6444 8764 2.684001 TCACATATGTCGACAACCCC 57.316 50.000 24.13 0.00 0.00 4.95
6445 8765 3.309682 CACATCACATATGTCGACAACCC 59.690 47.826 24.13 0.00 0.00 4.11
6446 8766 4.180817 TCACATCACATATGTCGACAACC 58.819 43.478 24.13 0.00 0.00 3.77
6447 8767 5.445939 GGTTCACATCACATATGTCGACAAC 60.446 44.000 24.13 10.81 0.00 3.32
6448 8768 4.629634 GGTTCACATCACATATGTCGACAA 59.370 41.667 24.13 12.36 0.00 3.18
6449 8769 4.081697 AGGTTCACATCACATATGTCGACA 60.082 41.667 22.48 22.48 0.00 4.35
6450 8770 4.433615 AGGTTCACATCACATATGTCGAC 58.566 43.478 9.11 9.11 0.00 4.20
6451 8771 4.441495 GGAGGTTCACATCACATATGTCGA 60.441 45.833 5.07 7.83 0.00 4.20
6452 8772 3.804325 GGAGGTTCACATCACATATGTCG 59.196 47.826 5.07 2.25 0.00 4.35
6453 8773 4.769688 TGGAGGTTCACATCACATATGTC 58.230 43.478 5.07 0.00 0.00 3.06
6454 8774 4.842531 TGGAGGTTCACATCACATATGT 57.157 40.909 1.41 1.41 0.00 2.29
6455 8775 5.370679 TCATGGAGGTTCACATCACATATG 58.629 41.667 0.00 0.00 0.00 1.78
6456 8776 5.635278 TCATGGAGGTTCACATCACATAT 57.365 39.130 0.00 0.00 0.00 1.78
6457 8777 5.635278 ATCATGGAGGTTCACATCACATA 57.365 39.130 0.00 0.00 0.00 2.29
6458 8778 4.515028 ATCATGGAGGTTCACATCACAT 57.485 40.909 0.00 0.00 0.00 3.21
6459 8779 4.305539 AATCATGGAGGTTCACATCACA 57.694 40.909 0.00 0.00 0.00 3.58
6460 8780 5.649782 AAAATCATGGAGGTTCACATCAC 57.350 39.130 0.00 0.00 0.00 3.06
6514 8834 9.860650 TGCTACCATGATACCAACTTATAAAAT 57.139 29.630 0.00 0.00 0.00 1.82
6515 8835 9.860650 ATGCTACCATGATACCAACTTATAAAA 57.139 29.630 0.00 0.00 0.00 1.52
6516 8836 9.502091 GATGCTACCATGATACCAACTTATAAA 57.498 33.333 0.00 0.00 0.00 1.40
6517 8837 8.880244 AGATGCTACCATGATACCAACTTATAA 58.120 33.333 0.00 0.00 0.00 0.98
6518 8838 8.435931 AGATGCTACCATGATACCAACTTATA 57.564 34.615 0.00 0.00 0.00 0.98
6519 8839 7.321717 AGATGCTACCATGATACCAACTTAT 57.678 36.000 0.00 0.00 0.00 1.73
6520 8840 6.747414 AGATGCTACCATGATACCAACTTA 57.253 37.500 0.00 0.00 0.00 2.24
6521 8841 5.636903 AGATGCTACCATGATACCAACTT 57.363 39.130 0.00 0.00 0.00 2.66
6522 8842 6.239714 CCTTAGATGCTACCATGATACCAACT 60.240 42.308 0.00 0.00 0.00 3.16
6523 8843 5.934625 CCTTAGATGCTACCATGATACCAAC 59.065 44.000 0.00 0.00 0.00 3.77
6524 8844 5.843969 TCCTTAGATGCTACCATGATACCAA 59.156 40.000 0.00 0.00 0.00 3.67
6525 8845 5.402630 TCCTTAGATGCTACCATGATACCA 58.597 41.667 0.00 0.00 0.00 3.25
6526 8846 5.482175 ACTCCTTAGATGCTACCATGATACC 59.518 44.000 0.00 0.00 0.00 2.73
6527 8847 6.393990 CACTCCTTAGATGCTACCATGATAC 58.606 44.000 0.00 0.00 0.00 2.24
6528 8848 5.481824 CCACTCCTTAGATGCTACCATGATA 59.518 44.000 0.00 0.00 0.00 2.15
6529 8849 4.285517 CCACTCCTTAGATGCTACCATGAT 59.714 45.833 0.00 0.00 0.00 2.45
6530 8850 3.643320 CCACTCCTTAGATGCTACCATGA 59.357 47.826 0.00 0.00 0.00 3.07
6531 8851 3.389329 ACCACTCCTTAGATGCTACCATG 59.611 47.826 0.00 0.00 0.00 3.66
6532 8852 3.658725 ACCACTCCTTAGATGCTACCAT 58.341 45.455 0.00 0.00 0.00 3.55
6533 8853 3.116096 ACCACTCCTTAGATGCTACCA 57.884 47.619 0.00 0.00 0.00 3.25
6534 8854 4.833380 TGATACCACTCCTTAGATGCTACC 59.167 45.833 0.00 0.00 0.00 3.18
6535 8855 6.015010 ACATGATACCACTCCTTAGATGCTAC 60.015 42.308 0.00 0.00 0.00 3.58
6536 8856 6.015095 CACATGATACCACTCCTTAGATGCTA 60.015 42.308 0.00 0.00 0.00 3.49
6537 8857 4.904251 ACATGATACCACTCCTTAGATGCT 59.096 41.667 0.00 0.00 0.00 3.79
6538 8858 4.993584 CACATGATACCACTCCTTAGATGC 59.006 45.833 0.00 0.00 0.00 3.91
6539 8859 6.410942 TCACATGATACCACTCCTTAGATG 57.589 41.667 0.00 0.00 0.00 2.90
6540 8860 8.128322 GTATCACATGATACCACTCCTTAGAT 57.872 38.462 17.70 0.00 46.87 1.98
6541 8861 7.526142 GTATCACATGATACCACTCCTTAGA 57.474 40.000 17.70 0.00 46.87 2.10
6552 8872 4.757149 GCAGGGGAAAGTATCACATGATAC 59.243 45.833 19.95 19.95 46.13 2.24
6553 8873 4.202461 GGCAGGGGAAAGTATCACATGATA 60.202 45.833 0.00 0.00 46.13 2.15
6554 8874 3.435601 GGCAGGGGAAAGTATCACATGAT 60.436 47.826 0.00 0.00 46.13 2.45
6555 8875 2.092429 GGCAGGGGAAAGTATCACATGA 60.092 50.000 0.00 0.00 46.13 3.07
6556 8876 2.301346 GGCAGGGGAAAGTATCACATG 58.699 52.381 0.00 0.00 45.98 3.21
6557 8877 1.922447 TGGCAGGGGAAAGTATCACAT 59.078 47.619 0.00 0.00 30.77 3.21
6558 8878 1.281867 CTGGCAGGGGAAAGTATCACA 59.718 52.381 6.61 0.00 30.77 3.58
6559 8879 1.408822 CCTGGCAGGGGAAAGTATCAC 60.409 57.143 26.34 0.00 0.00 3.06
6560 8880 0.918983 CCTGGCAGGGGAAAGTATCA 59.081 55.000 26.34 0.00 0.00 2.15
6561 8881 3.808984 CCTGGCAGGGGAAAGTATC 57.191 57.895 26.34 0.00 0.00 2.24
6599 8919 4.142249 GGTTGCAAGTTTGTACAGGAAACT 60.142 41.667 0.00 5.74 43.88 2.66
6635 8955 4.471025 TGGAGATGAGCTTTAGAATGACCA 59.529 41.667 0.00 0.00 0.00 4.02
6638 8958 5.431765 GGTTGGAGATGAGCTTTAGAATGA 58.568 41.667 0.00 0.00 0.00 2.57
6661 8981 1.241315 ACGGCCATTTTGAGGTTCCG 61.241 55.000 2.24 0.00 37.66 4.30
6712 9032 1.298667 GTACCACGGTGGATGGCTT 59.701 57.895 32.72 12.31 40.96 4.35
6732 9053 4.732647 GCAGACACGTTCATAGACCGATAA 60.733 45.833 0.00 0.00 0.00 1.75
6741 9062 2.683968 GGACAAGCAGACACGTTCATA 58.316 47.619 0.00 0.00 0.00 2.15
6747 9068 1.126846 GATTTCGGACAAGCAGACACG 59.873 52.381 0.00 0.00 0.00 4.49
6748 9069 2.143122 TGATTTCGGACAAGCAGACAC 58.857 47.619 0.00 0.00 0.00 3.67
6780 9101 3.265791 CGCAAATCTCTCCTAGTTTGCT 58.734 45.455 18.47 0.00 43.04 3.91
6787 9108 1.480954 GACACCCGCAAATCTCTCCTA 59.519 52.381 0.00 0.00 0.00 2.94
6804 9125 3.599285 GAACGTGATGGCCCGGACA 62.599 63.158 0.73 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.