Multiple sequence alignment - TraesCS4B01G124200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G124200 chr4B 100.000 6649 0 0 1 6649 149056102 149049454 0.000000e+00 12279.0
1 TraesCS4B01G124200 chr4B 79.538 303 54 7 567 864 652888779 652889078 6.760000e-50 209.0
2 TraesCS4B01G124200 chr4B 79.435 248 47 4 567 811 673070546 673070792 8.860000e-39 172.0
3 TraesCS4B01G124200 chr4B 95.238 42 1 1 3770 3811 620109836 620109796 1.550000e-06 65.8
4 TraesCS4B01G124200 chr4B 95.238 42 1 1 3770 3811 620169088 620169048 1.550000e-06 65.8
5 TraesCS4B01G124200 chr4B 75.862 116 28 0 570 685 656136454 656136339 7.200000e-05 60.2
6 TraesCS4B01G124200 chr4D 92.554 2995 187 20 1 2975 105259152 105256174 0.000000e+00 4263.0
7 TraesCS4B01G124200 chr4D 97.046 1422 31 6 4239 5655 105249339 105247924 0.000000e+00 2383.0
8 TraesCS4B01G124200 chr4D 84.972 712 40 24 5945 6648 105220999 105220347 0.000000e+00 660.0
9 TraesCS4B01G124200 chr4D 91.841 478 27 7 2978 3450 105256125 105255655 0.000000e+00 656.0
10 TraesCS4B01G124200 chr4D 99.630 270 1 0 3492 3761 123414463 123414732 1.670000e-135 494.0
11 TraesCS4B01G124200 chr4D 93.814 291 16 1 3812 4100 105255615 105255325 2.850000e-118 436.0
12 TraesCS4B01G124200 chr4D 82.637 311 46 8 570 874 226385248 226384940 1.100000e-67 268.0
13 TraesCS4B01G124200 chr4D 93.706 143 9 0 4097 4239 105249511 105249369 1.450000e-51 215.0
14 TraesCS4B01G124200 chr4D 77.228 303 63 6 569 866 453306110 453305809 8.860000e-39 172.0
15 TraesCS4B01G124200 chr4D 96.667 60 2 0 5656 5715 105247885 105247826 4.240000e-17 100.0
16 TraesCS4B01G124200 chr4A 93.526 1699 60 24 867 2555 470568488 470570146 0.000000e+00 2483.0
17 TraesCS4B01G124200 chr4A 95.992 1422 37 6 4239 5655 470571541 470572947 0.000000e+00 2292.0
18 TraesCS4B01G124200 chr4A 87.289 771 45 28 5894 6649 470573265 470573997 0.000000e+00 832.0
19 TraesCS4B01G124200 chr4A 95.085 529 20 4 2970 3493 470570549 470571076 0.000000e+00 828.0
20 TraesCS4B01G124200 chr4A 96.262 428 16 0 3812 4239 470571084 470571511 0.000000e+00 702.0
21 TraesCS4B01G124200 chr4A 97.035 371 8 2 2608 2975 470570143 470570513 7.320000e-174 621.0
22 TraesCS4B01G124200 chr4A 82.423 421 66 6 1 416 185986032 185986449 1.760000e-95 361.0
23 TraesCS4B01G124200 chr4A 95.139 144 7 0 5719 5862 470573126 470573269 1.870000e-55 228.0
24 TraesCS4B01G124200 chr4A 84.393 173 26 1 1500 1672 30193666 30193837 1.150000e-37 169.0
25 TraesCS4B01G124200 chrUn 100.000 270 0 0 3492 3761 389303751 389303482 3.580000e-137 499.0
26 TraesCS4B01G124200 chrUn 100.000 270 0 0 3492 3761 415783909 415784178 3.580000e-137 499.0
27 TraesCS4B01G124200 chrUn 99.630 270 1 0 3492 3761 189394120 189394389 1.670000e-135 494.0
28 TraesCS4B01G124200 chr5B 100.000 270 0 0 3492 3761 679660478 679660747 3.580000e-137 499.0
29 TraesCS4B01G124200 chr5B 100.000 30 0 0 6413 6442 700842424 700842453 1.000000e-03 56.5
30 TraesCS4B01G124200 chr7D 99.630 270 1 0 3492 3761 203554765 203554496 1.670000e-135 494.0
31 TraesCS4B01G124200 chr7D 99.630 270 1 0 3492 3761 626696909 626696640 1.670000e-135 494.0
32 TraesCS4B01G124200 chr7D 91.489 47 3 1 3767 3813 136209606 136209651 5.570000e-06 63.9
33 TraesCS4B01G124200 chr6A 99.630 270 1 0 3492 3761 608883236 608882967 1.670000e-135 494.0
34 TraesCS4B01G124200 chr5A 99.630 270 1 0 3492 3761 300074560 300074829 1.670000e-135 494.0
35 TraesCS4B01G124200 chr6D 83.599 439 63 6 1 433 303029080 303028645 2.890000e-108 403.0
36 TraesCS4B01G124200 chr6D 97.561 41 1 0 3771 3811 420621328 420621368 3.330000e-08 71.3
37 TraesCS4B01G124200 chr3D 82.086 441 70 7 1 435 587537453 587537016 1.050000e-97 368.0
38 TraesCS4B01G124200 chr3D 76.025 317 58 9 567 866 606511601 606511916 1.490000e-31 148.0
39 TraesCS4B01G124200 chr7B 79.840 501 87 12 1 493 379207475 379207969 2.950000e-93 353.0
40 TraesCS4B01G124200 chr7B 80.909 440 73 9 1 435 550452728 550452295 2.970000e-88 337.0
41 TraesCS4B01G124200 chr6B 81.208 447 76 6 1 442 568081260 568081703 2.950000e-93 353.0
42 TraesCS4B01G124200 chr6B 75.401 187 27 14 6363 6547 696338841 696339010 9.250000e-09 73.1
43 TraesCS4B01G124200 chr1D 81.293 433 77 2 1 430 414271063 414271494 1.370000e-91 348.0
44 TraesCS4B01G124200 chr1D 90.000 50 5 0 5895 5944 250222020 250221971 1.550000e-06 65.8
45 TraesCS4B01G124200 chr7A 80.631 444 76 9 1 439 699309957 699310395 1.070000e-87 335.0
46 TraesCS4B01G124200 chr7A 76.733 202 36 11 299 494 543818990 543819186 1.180000e-17 102.0
47 TraesCS4B01G124200 chr7A 95.349 43 1 1 3769 3811 287210878 287210837 4.300000e-07 67.6
48 TraesCS4B01G124200 chr2A 81.818 231 39 3 623 851 456572457 456572228 2.450000e-44 191.0
49 TraesCS4B01G124200 chr1A 85.816 141 19 1 1538 1678 541987929 541987790 1.490000e-31 148.0
50 TraesCS4B01G124200 chr1A 89.583 48 5 0 3764 3811 2641963 2641916 2.000000e-05 62.1
51 TraesCS4B01G124200 chr1B 75.490 306 69 6 567 867 529273700 529274004 1.930000e-30 145.0
52 TraesCS4B01G124200 chr1B 83.929 112 13 5 6314 6425 398014378 398014484 1.180000e-17 102.0
53 TraesCS4B01G124200 chr2D 93.750 48 3 0 3765 3812 553280911 553280864 9.250000e-09 73.1
54 TraesCS4B01G124200 chr2D 95.238 42 1 1 3770 3811 11184642 11184602 1.550000e-06 65.8
55 TraesCS4B01G124200 chr2B 93.750 48 3 0 3765 3812 659019890 659019843 9.250000e-09 73.1
56 TraesCS4B01G124200 chr5D 78.723 94 12 4 6413 6502 530925628 530925539 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G124200 chr4B 149049454 149056102 6648 True 12279.000000 12279 100.000000 1 6649 1 chr4B.!!$R1 6648
1 TraesCS4B01G124200 chr4D 105255325 105259152 3827 True 1785.000000 4263 92.736333 1 4100 3 chr4D.!!$R5 4099
2 TraesCS4B01G124200 chr4D 105247826 105249511 1685 True 899.333333 2383 95.806333 4097 5715 3 chr4D.!!$R4 1618
3 TraesCS4B01G124200 chr4D 105220347 105220999 652 True 660.000000 660 84.972000 5945 6648 1 chr4D.!!$R1 703
4 TraesCS4B01G124200 chr4A 470568488 470573997 5509 False 1140.857143 2483 94.332571 867 6649 7 chr4A.!!$F3 5782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.035343 GGAAGTACCCTCCTTGCCAC 60.035 60.0 4.64 0.0 0.00 5.01 F
521 528 0.037605 AAGTCGCTAACAAGGTCCGG 60.038 55.0 0.00 0.0 0.00 5.14 F
1032 1046 0.105142 ACCACTACCGGCCATATCCT 60.105 55.0 0.00 0.0 0.00 3.24 F
1768 1803 0.107993 ATGACTCTCCACATGCACCG 60.108 55.0 0.00 0.0 0.00 4.94 F
3189 3270 2.158957 TGCTTTCGTACCTCCATCCATC 60.159 50.0 0.00 0.0 0.00 3.51 F
3685 3771 0.032130 GGCTCGATGGCGATGTAAGA 59.968 55.0 0.00 0.0 46.80 2.10 F
3779 3865 0.176910 GCTTCCTTCCCTCCTCGAAG 59.823 60.0 0.00 0.0 37.14 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1031 1045 0.035725 TGCAGCAGTCAATGGGAGAG 60.036 55.000 0.00 0.00 0.00 3.20 R
1701 1733 0.393820 ACGACGGCTTTCCCTTAACA 59.606 50.000 0.00 0.00 0.00 2.41 R
2997 3078 6.235231 TGAATCCAAACTACTACCTCCATC 57.765 41.667 0.00 0.00 0.00 3.51 R
3586 3672 0.105224 TTCGCTTCGTTCAACCCTGA 59.895 50.000 0.00 0.00 0.00 3.86 R
4784 4908 2.029470 CACTGGTTCTCTCCACTCTGAC 60.029 54.545 0.00 0.00 33.55 3.51 R
5546 5672 0.178846 TCCTCTTCCCCAATGGACCA 60.179 55.000 0.00 0.00 45.11 4.02 R
5717 5884 2.042686 ACGCTACGAGTATGGTACCA 57.957 50.000 18.99 18.99 0.00 3.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 0.701310 AAACACCCTTCCCCTCTGGT 60.701 55.000 0.00 0.00 34.77 4.00
40 41 3.081554 CACCCTTCCCCTCTGGTG 58.918 66.667 0.00 0.00 42.01 4.17
52 53 1.196012 CTCTGGTGGAAGTACCCTCC 58.804 60.000 4.89 4.89 40.09 4.30
59 60 0.035343 GGAAGTACCCTCCTTGCCAC 60.035 60.000 4.64 0.00 0.00 5.01
70 71 1.220206 CTTGCCACTCCGATGAGCT 59.780 57.895 0.00 0.00 42.74 4.09
71 72 1.078918 TTGCCACTCCGATGAGCTG 60.079 57.895 0.00 0.00 42.74 4.24
77 78 0.671781 ACTCCGATGAGCTGCACAAC 60.672 55.000 3.43 0.20 42.74 3.32
83 84 0.399454 ATGAGCTGCACAACTGGACT 59.601 50.000 3.43 0.00 0.00 3.85
96 97 6.464222 CACAACTGGACTTAGGAAAGATACA 58.536 40.000 0.00 0.00 36.50 2.29
103 104 6.447084 TGGACTTAGGAAAGATACAGGGAAAT 59.553 38.462 0.00 0.00 36.50 2.17
105 106 8.491958 GGACTTAGGAAAGATACAGGGAAATAA 58.508 37.037 0.00 0.00 36.50 1.40
122 123 1.640917 TAATATGCCTCCGGGACTCC 58.359 55.000 0.00 0.00 33.58 3.85
173 174 0.748367 GGGAAGACAAAGGGATCCGC 60.748 60.000 5.45 0.00 0.00 5.54
176 177 3.202706 GACAAAGGGATCCGCCGC 61.203 66.667 5.45 0.00 37.63 6.53
217 221 1.816835 GTATCTGTGTCGTGGGAGTGA 59.183 52.381 0.00 0.00 0.00 3.41
235 239 2.357517 GGCTCCGTGTGACTGTGG 60.358 66.667 0.00 0.00 0.00 4.17
237 241 3.138625 CTCCGTGTGACTGTGGGT 58.861 61.111 0.00 0.00 0.00 4.51
247 251 1.270785 TGACTGTGGGTGCACATAGTG 60.271 52.381 20.43 7.95 41.93 2.74
252 256 3.605634 TGTGGGTGCACATAGTGTTATC 58.394 45.455 20.43 0.00 35.75 1.75
263 267 8.865978 TGCACATAGTGTTATCGTTTTAGTTAG 58.134 33.333 0.00 0.00 35.75 2.34
292 297 7.033530 TGTTCAAAATGTAACCATTCTCGTT 57.966 32.000 0.00 0.00 40.42 3.85
293 298 7.484975 TGTTCAAAATGTAACCATTCTCGTTT 58.515 30.769 0.00 0.00 40.42 3.60
306 311 6.039941 ACCATTCTCGTTTGGTTTGTATGAAA 59.960 34.615 0.00 0.00 43.73 2.69
307 312 7.090173 CCATTCTCGTTTGGTTTGTATGAAAT 58.910 34.615 0.00 0.00 0.00 2.17
308 313 7.598493 CCATTCTCGTTTGGTTTGTATGAAATT 59.402 33.333 0.00 0.00 0.00 1.82
309 314 8.638565 CATTCTCGTTTGGTTTGTATGAAATTC 58.361 33.333 0.00 0.00 0.00 2.17
310 315 6.367421 TCTCGTTTGGTTTGTATGAAATTCG 58.633 36.000 0.00 0.00 0.00 3.34
311 316 6.017770 TCTCGTTTGGTTTGTATGAAATTCGT 60.018 34.615 0.00 0.00 0.00 3.85
312 317 6.137415 TCGTTTGGTTTGTATGAAATTCGTC 58.863 36.000 0.00 0.00 0.00 4.20
313 318 5.910166 CGTTTGGTTTGTATGAAATTCGTCA 59.090 36.000 0.00 0.00 0.00 4.35
314 319 6.580791 CGTTTGGTTTGTATGAAATTCGTCAT 59.419 34.615 0.00 0.00 41.21 3.06
315 320 7.409238 CGTTTGGTTTGTATGAAATTCGTCATG 60.409 37.037 3.34 0.00 38.69 3.07
316 321 6.567687 TGGTTTGTATGAAATTCGTCATGT 57.432 33.333 3.34 0.00 38.69 3.21
317 322 6.976088 TGGTTTGTATGAAATTCGTCATGTT 58.024 32.000 3.34 0.00 38.69 2.71
318 323 7.429633 TGGTTTGTATGAAATTCGTCATGTTT 58.570 30.769 3.34 0.00 38.69 2.83
332 337 6.285224 TCGTCATGTTTATATGAAATCCGGT 58.715 36.000 0.00 0.00 38.69 5.28
340 345 4.836125 ATATGAAATCCGGTCATGTTGC 57.164 40.909 14.60 0.00 36.41 4.17
345 350 1.386525 ATCCGGTCATGTTGCCATGC 61.387 55.000 0.00 0.00 46.64 4.06
346 351 2.100797 CGGTCATGTTGCCATGCG 59.899 61.111 0.00 0.00 46.64 4.73
355 360 0.243365 GTTGCCATGCGTTTCATCCA 59.757 50.000 0.00 0.00 31.79 3.41
365 372 5.250235 TGCGTTTCATCCAGTTTGTTAAA 57.750 34.783 0.00 0.00 0.00 1.52
391 398 5.567138 AGTTTGAAATGTATGTGGCTAGC 57.433 39.130 6.04 6.04 0.00 3.42
400 407 0.464373 ATGTGGCTAGCGTTGGATGG 60.464 55.000 9.00 0.00 0.00 3.51
402 409 2.124736 GGCTAGCGTTGGATGGCA 60.125 61.111 9.00 0.00 37.84 4.92
403 410 2.182842 GGCTAGCGTTGGATGGCAG 61.183 63.158 9.00 0.00 37.84 4.85
418 425 2.584418 CAGCCTCTCGCATCCGTG 60.584 66.667 0.00 0.00 41.38 4.94
453 460 2.484770 CCCTTCTGTCTTTGGACGAACA 60.485 50.000 0.00 0.00 44.83 3.18
454 461 3.403038 CCTTCTGTCTTTGGACGAACAT 58.597 45.455 0.00 0.00 44.83 2.71
458 465 1.418264 TGTCTTTGGACGAACATGGGA 59.582 47.619 0.00 0.00 44.83 4.37
459 466 2.076863 GTCTTTGGACGAACATGGGAG 58.923 52.381 0.00 0.00 32.47 4.30
472 479 5.393027 CGAACATGGGAGAAAATTTACAGGG 60.393 44.000 0.00 0.00 0.00 4.45
488 495 4.179579 GGCGCGGTTGAAGATGCC 62.180 66.667 8.83 0.00 35.04 4.40
496 503 2.369394 GGTTGAAGATGCCCTAAGTGG 58.631 52.381 0.00 0.00 0.00 4.00
513 520 0.179015 TGGGCCAAAAGTCGCTAACA 60.179 50.000 2.13 0.00 0.00 2.41
514 521 0.955905 GGGCCAAAAGTCGCTAACAA 59.044 50.000 4.39 0.00 0.00 2.83
521 528 0.037605 AAGTCGCTAACAAGGTCCGG 60.038 55.000 0.00 0.00 0.00 5.14
549 556 1.817941 GTGGCGGCCGATTGTACAT 60.818 57.895 33.48 0.00 0.00 2.29
574 582 2.479837 CTAGACACACTCGCAAACCAA 58.520 47.619 0.00 0.00 0.00 3.67
578 586 1.134340 ACACACTCGCAAACCAACCTA 60.134 47.619 0.00 0.00 0.00 3.08
579 587 2.151202 CACACTCGCAAACCAACCTAT 58.849 47.619 0.00 0.00 0.00 2.57
581 589 2.151202 CACTCGCAAACCAACCTATGT 58.849 47.619 0.00 0.00 0.00 2.29
589 597 5.720371 CAAACCAACCTATGTTTGGATGA 57.280 39.130 8.10 0.00 44.68 2.92
593 601 7.645058 AACCAACCTATGTTTGGATGATTAG 57.355 36.000 8.10 0.00 30.42 1.73
599 607 8.503428 ACCTATGTTTGGATGATTAGAGAGAT 57.497 34.615 0.00 0.00 0.00 2.75
617 625 7.651607 AGAGAGATAGTGATATTCTAGCCCAT 58.348 38.462 0.00 0.00 0.00 4.00
620 628 8.066867 AGAGATAGTGATATTCTAGCCCATCAT 58.933 37.037 4.10 0.00 30.63 2.45
632 640 1.413812 GCCCATCATGGTTCAAATCCC 59.586 52.381 2.07 0.00 35.17 3.85
634 642 2.653726 CCATCATGGTTCAAATCCCGA 58.346 47.619 0.00 0.00 31.35 5.14
639 647 3.118075 TCATGGTTCAAATCCCGATGCTA 60.118 43.478 0.00 0.00 0.00 3.49
648 656 5.769662 TCAAATCCCGATGCTAGCATTATTT 59.230 36.000 30.08 25.23 36.70 1.40
649 657 6.265196 TCAAATCCCGATGCTAGCATTATTTT 59.735 34.615 30.08 20.41 36.70 1.82
652 660 4.278170 TCCCGATGCTAGCATTATTTTTGG 59.722 41.667 30.08 20.03 36.70 3.28
702 710 0.889638 TCAGTGCGAGGAGACGTTCT 60.890 55.000 0.00 0.00 35.59 3.01
720 728 3.179265 CGTCGACGACATGGTGCC 61.179 66.667 33.35 0.00 43.02 5.01
726 734 1.940883 GACGACATGGTGCCCTACGA 61.941 60.000 0.00 0.00 0.00 3.43
733 741 0.249120 TGGTGCCCTACGATGACTTG 59.751 55.000 0.00 0.00 0.00 3.16
735 743 0.535335 GTGCCCTACGATGACTTGGA 59.465 55.000 0.00 0.00 0.00 3.53
743 751 5.419542 CCTACGATGACTTGGAAAATCTCA 58.580 41.667 0.00 0.00 0.00 3.27
744 752 5.292101 CCTACGATGACTTGGAAAATCTCAC 59.708 44.000 0.00 0.00 0.00 3.51
753 761 7.770433 TGACTTGGAAAATCTCACGATGATATT 59.230 33.333 0.00 0.00 0.00 1.28
755 763 7.227512 ACTTGGAAAATCTCACGATGATATTCC 59.772 37.037 0.00 0.00 33.75 3.01
757 765 5.120830 GGAAAATCTCACGATGATATTCCGG 59.879 44.000 0.00 0.00 0.00 5.14
760 768 2.628178 TCTCACGATGATATTCCGGCTT 59.372 45.455 0.00 0.00 0.00 4.35
776 784 2.677037 CGGCTTAGTCCCTCGAAAATGT 60.677 50.000 0.00 0.00 0.00 2.71
778 786 4.510571 GGCTTAGTCCCTCGAAAATGTTA 58.489 43.478 0.00 0.00 0.00 2.41
794 803 6.645884 AAATGTTAATAGGGTAGGGTGTGA 57.354 37.500 0.00 0.00 0.00 3.58
796 805 5.623956 TGTTAATAGGGTAGGGTGTGATG 57.376 43.478 0.00 0.00 0.00 3.07
802 811 0.324943 GGTAGGGTGTGATGTGTGCT 59.675 55.000 0.00 0.00 0.00 4.40
805 814 1.609208 AGGGTGTGATGTGTGCTTTC 58.391 50.000 0.00 0.00 0.00 2.62
809 818 3.127548 GGGTGTGATGTGTGCTTTCATAG 59.872 47.826 0.00 0.00 0.00 2.23
819 828 2.615912 GTGCTTTCATAGGGATGAGTGC 59.384 50.000 7.05 7.05 43.03 4.40
824 833 1.154197 CATAGGGATGAGTGCATGCG 58.846 55.000 14.09 0.00 43.08 4.73
826 835 1.408969 TAGGGATGAGTGCATGCGTA 58.591 50.000 14.09 0.00 43.08 4.42
834 845 6.273071 GGATGAGTGCATGCGTATATGTATA 58.727 40.000 14.09 0.00 33.09 1.47
847 858 7.095397 TGCGTATATGTATAAGCATTTGTGTCC 60.095 37.037 13.99 0.00 44.58 4.02
940 953 2.097925 GCAATGTTGTTTTTCGCGTGAG 60.098 45.455 5.77 0.00 0.00 3.51
973 986 1.200760 TGTCCCATAGCAGCACACCT 61.201 55.000 0.00 0.00 0.00 4.00
1025 1039 2.779033 CGACCTACCACTACCGGCC 61.779 68.421 0.00 0.00 0.00 6.13
1027 1041 1.002533 ACCTACCACTACCGGCCAT 59.997 57.895 0.00 0.00 0.00 4.40
1028 1042 0.262580 ACCTACCACTACCGGCCATA 59.737 55.000 0.00 0.00 0.00 2.74
1029 1043 1.132945 ACCTACCACTACCGGCCATAT 60.133 52.381 0.00 0.00 0.00 1.78
1030 1044 1.549170 CCTACCACTACCGGCCATATC 59.451 57.143 0.00 0.00 0.00 1.63
1031 1045 1.549170 CTACCACTACCGGCCATATCC 59.451 57.143 0.00 0.00 0.00 2.59
1032 1046 0.105142 ACCACTACCGGCCATATCCT 60.105 55.000 0.00 0.00 0.00 3.24
1033 1047 0.608640 CCACTACCGGCCATATCCTC 59.391 60.000 0.00 0.00 0.00 3.71
1034 1048 1.633774 CACTACCGGCCATATCCTCT 58.366 55.000 0.00 0.00 0.00 3.69
1035 1049 1.546476 CACTACCGGCCATATCCTCTC 59.454 57.143 0.00 0.00 0.00 3.20
1036 1050 1.187087 CTACCGGCCATATCCTCTCC 58.813 60.000 0.00 0.00 0.00 3.71
1037 1051 0.252103 TACCGGCCATATCCTCTCCC 60.252 60.000 0.00 0.00 0.00 4.30
1038 1052 1.536418 CCGGCCATATCCTCTCCCA 60.536 63.158 2.24 0.00 0.00 4.37
1039 1053 0.911525 CCGGCCATATCCTCTCCCAT 60.912 60.000 2.24 0.00 0.00 4.00
1402 1432 7.383300 TCTCATGATAAACATTGACTAGATGCG 59.617 37.037 0.00 0.00 37.07 4.73
1409 1439 9.935682 ATAAACATTGACTAGATGCGTATTTTG 57.064 29.630 0.00 0.00 0.00 2.44
1416 1446 3.976793 AGATGCGTATTTTGATGGCTG 57.023 42.857 0.00 0.00 0.00 4.85
1443 1473 9.984590 TTTAGGCTATGTTCTTATTTTAAGGGT 57.015 29.630 0.00 0.00 0.00 4.34
1476 1506 1.004277 CGAATGTTCCCTGGGAAGGAA 59.996 52.381 28.21 16.86 42.88 3.36
1507 1537 2.844122 ATATTTTTCGCTTGCGGGAC 57.156 45.000 15.10 0.00 0.00 4.46
1674 1704 2.124320 TTCGCTGGCTATTGGGGC 60.124 61.111 0.00 0.00 0.00 5.80
1682 1712 1.632589 GGCTATTGGGGCCCTATTTG 58.367 55.000 24.53 17.61 43.49 2.32
1696 1728 4.513318 GCCCTATTTGTGAGTAGATGCTTC 59.487 45.833 0.00 0.00 0.00 3.86
1701 1733 7.714377 CCTATTTGTGAGTAGATGCTTCTTCAT 59.286 37.037 7.51 0.00 33.17 2.57
1702 1734 6.732531 TTTGTGAGTAGATGCTTCTTCATG 57.267 37.500 7.51 0.00 33.17 3.07
1710 1742 5.441718 AGATGCTTCTTCATGTTAAGGGA 57.558 39.130 0.00 0.00 0.00 4.20
1768 1803 0.107993 ATGACTCTCCACATGCACCG 60.108 55.000 0.00 0.00 0.00 4.94
1994 2030 2.223971 GCTAAGTGGCTCGCCTGTTATA 60.224 50.000 9.65 0.00 36.94 0.98
1995 2031 3.555168 GCTAAGTGGCTCGCCTGTTATAT 60.555 47.826 9.65 0.00 36.94 0.86
2212 2248 9.846248 AATCCTGAAGATATTTTCGTTGAAAAG 57.154 29.630 10.13 0.00 38.33 2.27
2418 2454 3.325293 ACCACAGATCATCACAGTGAC 57.675 47.619 5.05 0.00 32.14 3.67
2708 2744 3.052036 GCATGCTTATAATGTTTGGCGG 58.948 45.455 11.37 0.00 0.00 6.13
2747 2783 4.362279 AGTTGTGTGCTTAGCAAATGTTG 58.638 39.130 9.05 0.00 41.47 3.33
2784 2820 7.318141 AGTATATATGGCGTGTGGTTATGTAC 58.682 38.462 0.00 0.00 0.00 2.90
2975 3011 7.533426 AGTCATGCATGATGTTTTCTCTTTAC 58.467 34.615 30.89 13.93 39.30 2.01
2977 3013 6.433716 TCATGCATGATGTTTTCTCTTTACCA 59.566 34.615 25.42 0.00 33.29 3.25
2980 3061 7.147312 TGCATGATGTTTTCTCTTTACCAAAG 58.853 34.615 0.00 0.00 39.88 2.77
2983 3064 7.873719 TGATGTTTTCTCTTTACCAAAGACA 57.126 32.000 0.00 0.00 42.31 3.41
3189 3270 2.158957 TGCTTTCGTACCTCCATCCATC 60.159 50.000 0.00 0.00 0.00 3.51
3191 3272 3.800604 GCTTTCGTACCTCCATCCATCTC 60.801 52.174 0.00 0.00 0.00 2.75
3195 3276 2.543861 CGTACCTCCATCCATCTCGTTG 60.544 54.545 0.00 0.00 0.00 4.10
3249 3330 8.477419 TCCTTCCTACAGAAATTTGTGAAAAT 57.523 30.769 21.09 2.18 32.88 1.82
3326 3410 9.904198 TGAATATACCTTCAAATGATCAAGACA 57.096 29.630 0.00 0.00 32.35 3.41
3493 3579 7.948034 TTTACATAAATGGAGAAACGGGAAT 57.052 32.000 0.00 0.00 0.00 3.01
3494 3580 7.948034 TTACATAAATGGAGAAACGGGAATT 57.052 32.000 0.00 0.00 0.00 2.17
3496 3582 6.630071 ACATAAATGGAGAAACGGGAATTTG 58.370 36.000 0.00 0.00 0.00 2.32
3497 3583 6.435904 ACATAAATGGAGAAACGGGAATTTGA 59.564 34.615 0.00 0.00 0.00 2.69
3498 3584 7.124147 ACATAAATGGAGAAACGGGAATTTGAT 59.876 33.333 0.00 0.00 0.00 2.57
3499 3585 5.582689 AATGGAGAAACGGGAATTTGATC 57.417 39.130 0.00 0.00 0.00 2.92
3500 3586 4.027674 TGGAGAAACGGGAATTTGATCA 57.972 40.909 0.00 0.00 0.00 2.92
3501 3587 4.009675 TGGAGAAACGGGAATTTGATCAG 58.990 43.478 0.00 0.00 0.00 2.90
3502 3588 4.261801 GGAGAAACGGGAATTTGATCAGA 58.738 43.478 0.00 0.00 0.00 3.27
3503 3589 4.700213 GGAGAAACGGGAATTTGATCAGAA 59.300 41.667 0.00 0.00 0.00 3.02
3504 3590 5.163713 GGAGAAACGGGAATTTGATCAGAAG 60.164 44.000 0.00 0.00 0.00 2.85
3505 3591 5.316987 AGAAACGGGAATTTGATCAGAAGT 58.683 37.500 0.00 0.00 0.00 3.01
3506 3592 5.182001 AGAAACGGGAATTTGATCAGAAGTG 59.818 40.000 0.00 0.00 0.00 3.16
3507 3593 4.286297 ACGGGAATTTGATCAGAAGTGA 57.714 40.909 0.00 0.00 37.02 3.41
3508 3594 4.256920 ACGGGAATTTGATCAGAAGTGAG 58.743 43.478 0.00 0.00 35.66 3.51
3509 3595 4.256920 CGGGAATTTGATCAGAAGTGAGT 58.743 43.478 0.00 0.00 35.66 3.41
3510 3596 4.697352 CGGGAATTTGATCAGAAGTGAGTT 59.303 41.667 0.00 0.00 35.66 3.01
3511 3597 5.163814 CGGGAATTTGATCAGAAGTGAGTTC 60.164 44.000 0.00 0.00 35.66 3.01
3512 3598 5.707298 GGGAATTTGATCAGAAGTGAGTTCA 59.293 40.000 2.50 0.00 37.67 3.18
3513 3599 6.376581 GGGAATTTGATCAGAAGTGAGTTCAT 59.623 38.462 2.50 0.00 37.67 2.57
3514 3600 7.094032 GGGAATTTGATCAGAAGTGAGTTCATT 60.094 37.037 2.50 0.00 37.67 2.57
3515 3601 7.754027 GGAATTTGATCAGAAGTGAGTTCATTG 59.246 37.037 2.50 0.00 37.67 2.82
3516 3602 7.756395 ATTTGATCAGAAGTGAGTTCATTGT 57.244 32.000 2.50 0.00 37.67 2.71
3517 3603 7.572523 TTTGATCAGAAGTGAGTTCATTGTT 57.427 32.000 2.50 0.00 37.67 2.83
3518 3604 6.549912 TGATCAGAAGTGAGTTCATTGTTG 57.450 37.500 2.50 0.00 37.67 3.33
3519 3605 6.057533 TGATCAGAAGTGAGTTCATTGTTGT 58.942 36.000 2.50 0.00 37.67 3.32
3520 3606 6.543465 TGATCAGAAGTGAGTTCATTGTTGTT 59.457 34.615 2.50 0.00 37.67 2.83
3521 3607 6.122850 TCAGAAGTGAGTTCATTGTTGTTG 57.877 37.500 2.50 0.00 37.67 3.33
3522 3608 5.647658 TCAGAAGTGAGTTCATTGTTGTTGT 59.352 36.000 2.50 0.00 37.67 3.32
3523 3609 6.821160 TCAGAAGTGAGTTCATTGTTGTTGTA 59.179 34.615 2.50 0.00 37.67 2.41
3524 3610 7.498900 TCAGAAGTGAGTTCATTGTTGTTGTAT 59.501 33.333 2.50 0.00 37.67 2.29
3525 3611 8.773645 CAGAAGTGAGTTCATTGTTGTTGTATA 58.226 33.333 2.50 0.00 37.67 1.47
3526 3612 8.993121 AGAAGTGAGTTCATTGTTGTTGTATAG 58.007 33.333 2.50 0.00 37.67 1.31
3527 3613 7.133891 AGTGAGTTCATTGTTGTTGTATAGC 57.866 36.000 0.00 0.00 0.00 2.97
3528 3614 6.015504 GTGAGTTCATTGTTGTTGTATAGCG 58.984 40.000 0.00 0.00 0.00 4.26
3529 3615 5.929415 TGAGTTCATTGTTGTTGTATAGCGA 59.071 36.000 0.00 0.00 0.00 4.93
3530 3616 6.425417 TGAGTTCATTGTTGTTGTATAGCGAA 59.575 34.615 0.00 0.00 0.00 4.70
3531 3617 7.041712 TGAGTTCATTGTTGTTGTATAGCGAAA 60.042 33.333 0.00 0.00 0.00 3.46
3532 3618 7.075741 AGTTCATTGTTGTTGTATAGCGAAAC 58.924 34.615 0.00 0.00 0.00 2.78
3533 3619 5.933790 TCATTGTTGTTGTATAGCGAAACC 58.066 37.500 0.00 0.00 0.00 3.27
3534 3620 5.703592 TCATTGTTGTTGTATAGCGAAACCT 59.296 36.000 0.00 0.00 0.00 3.50
3535 3621 6.205853 TCATTGTTGTTGTATAGCGAAACCTT 59.794 34.615 0.00 0.00 0.00 3.50
3536 3622 6.380095 TTGTTGTTGTATAGCGAAACCTTT 57.620 33.333 0.00 0.00 0.00 3.11
3537 3623 5.992729 TGTTGTTGTATAGCGAAACCTTTC 58.007 37.500 0.00 0.00 0.00 2.62
3538 3624 5.049267 TGTTGTTGTATAGCGAAACCTTTCC 60.049 40.000 0.00 0.00 33.68 3.13
3539 3625 4.901868 TGTTGTATAGCGAAACCTTTCCT 58.098 39.130 0.00 0.00 33.68 3.36
3540 3626 5.310451 TGTTGTATAGCGAAACCTTTCCTT 58.690 37.500 0.00 0.00 33.68 3.36
3541 3627 5.180492 TGTTGTATAGCGAAACCTTTCCTTG 59.820 40.000 0.00 0.00 33.68 3.61
3542 3628 5.155278 TGTATAGCGAAACCTTTCCTTGA 57.845 39.130 0.00 0.00 33.68 3.02
3543 3629 4.933400 TGTATAGCGAAACCTTTCCTTGAC 59.067 41.667 0.00 0.00 33.68 3.18
3544 3630 2.341846 AGCGAAACCTTTCCTTGACA 57.658 45.000 0.00 0.00 33.68 3.58
3545 3631 2.650322 AGCGAAACCTTTCCTTGACAA 58.350 42.857 0.00 0.00 33.68 3.18
3546 3632 3.020984 AGCGAAACCTTTCCTTGACAAA 58.979 40.909 0.00 0.00 33.68 2.83
3547 3633 3.445805 AGCGAAACCTTTCCTTGACAAAA 59.554 39.130 0.00 0.00 33.68 2.44
3548 3634 3.550275 GCGAAACCTTTCCTTGACAAAAC 59.450 43.478 0.00 0.00 33.68 2.43
3549 3635 4.109766 CGAAACCTTTCCTTGACAAAACC 58.890 43.478 0.00 0.00 33.68 3.27
3550 3636 4.381079 CGAAACCTTTCCTTGACAAAACCA 60.381 41.667 0.00 0.00 33.68 3.67
3551 3637 5.670485 GAAACCTTTCCTTGACAAAACCAT 58.330 37.500 0.00 0.00 0.00 3.55
3552 3638 5.692115 AACCTTTCCTTGACAAAACCATT 57.308 34.783 0.00 0.00 0.00 3.16
3553 3639 5.276461 ACCTTTCCTTGACAAAACCATTC 57.724 39.130 0.00 0.00 0.00 2.67
3554 3640 4.962362 ACCTTTCCTTGACAAAACCATTCT 59.038 37.500 0.00 0.00 0.00 2.40
3555 3641 5.069119 ACCTTTCCTTGACAAAACCATTCTC 59.931 40.000 0.00 0.00 0.00 2.87
3556 3642 5.068987 CCTTTCCTTGACAAAACCATTCTCA 59.931 40.000 0.00 0.00 0.00 3.27
3557 3643 5.772825 TTCCTTGACAAAACCATTCTCAG 57.227 39.130 0.00 0.00 0.00 3.35
3558 3644 3.569701 TCCTTGACAAAACCATTCTCAGC 59.430 43.478 0.00 0.00 0.00 4.26
3559 3645 3.571401 CCTTGACAAAACCATTCTCAGCT 59.429 43.478 0.00 0.00 0.00 4.24
3560 3646 4.761739 CCTTGACAAAACCATTCTCAGCTA 59.238 41.667 0.00 0.00 0.00 3.32
3561 3647 5.241506 CCTTGACAAAACCATTCTCAGCTAA 59.758 40.000 0.00 0.00 0.00 3.09
3562 3648 6.071728 CCTTGACAAAACCATTCTCAGCTAAT 60.072 38.462 0.00 0.00 0.00 1.73
3563 3649 7.121168 CCTTGACAAAACCATTCTCAGCTAATA 59.879 37.037 0.00 0.00 0.00 0.98
3564 3650 7.615582 TGACAAAACCATTCTCAGCTAATAG 57.384 36.000 0.00 0.00 0.00 1.73
3565 3651 7.394016 TGACAAAACCATTCTCAGCTAATAGA 58.606 34.615 0.00 0.00 0.00 1.98
3566 3652 7.882791 TGACAAAACCATTCTCAGCTAATAGAA 59.117 33.333 7.55 7.55 36.24 2.10
3567 3653 8.273780 ACAAAACCATTCTCAGCTAATAGAAG 57.726 34.615 10.15 2.56 35.32 2.85
3568 3654 6.934048 AAACCATTCTCAGCTAATAGAAGC 57.066 37.500 10.15 0.00 43.11 3.86
3569 3655 4.967036 ACCATTCTCAGCTAATAGAAGCC 58.033 43.478 10.15 0.00 43.86 4.35
3570 3656 3.993081 CCATTCTCAGCTAATAGAAGCCG 59.007 47.826 10.15 3.51 43.86 5.52
3571 3657 4.262207 CCATTCTCAGCTAATAGAAGCCGA 60.262 45.833 10.15 0.00 43.86 5.54
3572 3658 4.576216 TTCTCAGCTAATAGAAGCCGAG 57.424 45.455 3.25 3.25 44.81 4.63
3573 3659 2.294791 TCTCAGCTAATAGAAGCCGAGC 59.705 50.000 4.56 0.00 43.67 5.03
3574 3660 2.295909 CTCAGCTAATAGAAGCCGAGCT 59.704 50.000 0.00 0.00 43.86 4.09
3575 3661 3.487372 TCAGCTAATAGAAGCCGAGCTA 58.513 45.455 0.00 0.00 43.86 3.32
3576 3662 4.082845 TCAGCTAATAGAAGCCGAGCTAT 58.917 43.478 0.00 0.00 43.86 2.97
3577 3663 4.156922 TCAGCTAATAGAAGCCGAGCTATC 59.843 45.833 0.00 0.90 43.86 2.08
3578 3664 4.157656 CAGCTAATAGAAGCCGAGCTATCT 59.842 45.833 0.00 7.13 43.86 1.98
3579 3665 5.355630 CAGCTAATAGAAGCCGAGCTATCTA 59.644 44.000 14.00 14.00 43.86 1.98
3580 3666 6.039270 CAGCTAATAGAAGCCGAGCTATCTAT 59.961 42.308 15.87 15.87 43.86 1.98
3581 3667 6.262273 AGCTAATAGAAGCCGAGCTATCTATC 59.738 42.308 18.71 12.63 43.86 2.08
3582 3668 5.845391 AATAGAAGCCGAGCTATCTATCC 57.155 43.478 18.71 0.00 38.25 2.59
3583 3669 3.162147 AGAAGCCGAGCTATCTATCCA 57.838 47.619 0.00 0.00 38.25 3.41
3584 3670 3.088532 AGAAGCCGAGCTATCTATCCAG 58.911 50.000 0.00 0.00 38.25 3.86
3585 3671 2.889170 AGCCGAGCTATCTATCCAGA 57.111 50.000 0.00 0.00 36.99 3.86
3586 3672 3.380471 AGCCGAGCTATCTATCCAGAT 57.620 47.619 0.00 0.00 44.04 2.90
3587 3673 3.287222 AGCCGAGCTATCTATCCAGATC 58.713 50.000 0.00 0.00 40.81 2.75
3588 3674 3.020274 GCCGAGCTATCTATCCAGATCA 58.980 50.000 0.00 0.00 40.81 2.92
3589 3675 3.066621 GCCGAGCTATCTATCCAGATCAG 59.933 52.174 0.00 0.00 40.81 2.90
3590 3676 3.631686 CCGAGCTATCTATCCAGATCAGG 59.368 52.174 0.00 0.00 40.81 3.86
3591 3677 3.631686 CGAGCTATCTATCCAGATCAGGG 59.368 52.174 4.05 0.39 40.81 4.45
3592 3678 4.609301 GAGCTATCTATCCAGATCAGGGT 58.391 47.826 4.05 0.00 40.81 4.34
3593 3679 5.022227 AGCTATCTATCCAGATCAGGGTT 57.978 43.478 4.05 0.00 40.81 4.11
3594 3680 4.776837 AGCTATCTATCCAGATCAGGGTTG 59.223 45.833 4.05 0.00 40.81 3.77
3595 3681 4.774726 GCTATCTATCCAGATCAGGGTTGA 59.225 45.833 4.14 4.14 40.81 3.18
3596 3682 5.247110 GCTATCTATCCAGATCAGGGTTGAA 59.753 44.000 5.70 0.00 40.81 2.69
3597 3683 5.559148 ATCTATCCAGATCAGGGTTGAAC 57.441 43.478 5.70 0.00 36.80 3.18
3598 3684 2.698855 ATCCAGATCAGGGTTGAACG 57.301 50.000 4.05 0.00 36.78 3.95
3599 3685 1.639722 TCCAGATCAGGGTTGAACGA 58.360 50.000 4.05 0.00 36.78 3.85
3600 3686 1.974957 TCCAGATCAGGGTTGAACGAA 59.025 47.619 4.05 0.00 36.78 3.85
3601 3687 2.028112 TCCAGATCAGGGTTGAACGAAG 60.028 50.000 4.05 0.00 36.78 3.79
3602 3688 1.734465 CAGATCAGGGTTGAACGAAGC 59.266 52.381 0.00 0.00 36.78 3.86
3603 3689 0.721718 GATCAGGGTTGAACGAAGCG 59.278 55.000 0.00 0.00 36.78 4.68
3604 3690 0.320374 ATCAGGGTTGAACGAAGCGA 59.680 50.000 0.00 0.00 36.78 4.93
3605 3691 0.105224 TCAGGGTTGAACGAAGCGAA 59.895 50.000 0.00 0.00 32.41 4.70
3606 3692 1.156736 CAGGGTTGAACGAAGCGAAT 58.843 50.000 0.00 0.00 32.41 3.34
3607 3693 1.135972 CAGGGTTGAACGAAGCGAATG 60.136 52.381 0.00 0.00 32.41 2.67
3608 3694 0.168128 GGGTTGAACGAAGCGAATGG 59.832 55.000 0.00 0.00 32.41 3.16
3609 3695 1.153353 GGTTGAACGAAGCGAATGGA 58.847 50.000 0.00 0.00 0.00 3.41
3610 3696 1.533731 GGTTGAACGAAGCGAATGGAA 59.466 47.619 0.00 0.00 0.00 3.53
3611 3697 2.031508 GGTTGAACGAAGCGAATGGAAA 60.032 45.455 0.00 0.00 0.00 3.13
3612 3698 3.549221 GGTTGAACGAAGCGAATGGAAAA 60.549 43.478 0.00 0.00 0.00 2.29
3613 3699 3.536158 TGAACGAAGCGAATGGAAAAG 57.464 42.857 0.00 0.00 0.00 2.27
3614 3700 2.242564 GAACGAAGCGAATGGAAAAGC 58.757 47.619 0.00 0.00 0.00 3.51
3615 3701 0.521735 ACGAAGCGAATGGAAAAGCC 59.478 50.000 0.00 0.00 37.10 4.35
3631 3717 8.376889 TGGAAAAGCCAAAGAAAACATAAATC 57.623 30.769 0.00 0.00 45.87 2.17
3632 3718 7.443879 TGGAAAAGCCAAAGAAAACATAAATCC 59.556 33.333 0.00 0.00 45.87 3.01
3633 3719 7.443879 GGAAAAGCCAAAGAAAACATAAATCCA 59.556 33.333 0.00 0.00 36.34 3.41
3634 3720 8.922931 AAAAGCCAAAGAAAACATAAATCCAT 57.077 26.923 0.00 0.00 0.00 3.41
3635 3721 8.922931 AAAGCCAAAGAAAACATAAATCCATT 57.077 26.923 0.00 0.00 0.00 3.16
3636 3722 7.910441 AGCCAAAGAAAACATAAATCCATTG 57.090 32.000 0.00 0.00 0.00 2.82
3637 3723 6.372381 AGCCAAAGAAAACATAAATCCATTGC 59.628 34.615 0.00 0.00 0.00 3.56
3638 3724 6.672836 GCCAAAGAAAACATAAATCCATTGCG 60.673 38.462 0.00 0.00 0.00 4.85
3639 3725 6.589523 CCAAAGAAAACATAAATCCATTGCGA 59.410 34.615 0.00 0.00 0.00 5.10
3640 3726 7.278424 CCAAAGAAAACATAAATCCATTGCGAT 59.722 33.333 0.00 0.00 0.00 4.58
3641 3727 8.658609 CAAAGAAAACATAAATCCATTGCGATT 58.341 29.630 0.00 0.00 33.84 3.34
3642 3728 9.868277 AAAGAAAACATAAATCCATTGCGATTA 57.132 25.926 0.00 0.00 32.12 1.75
3643 3729 9.520204 AAGAAAACATAAATCCATTGCGATTAG 57.480 29.630 0.00 0.00 32.12 1.73
3644 3730 8.902806 AGAAAACATAAATCCATTGCGATTAGA 58.097 29.630 0.00 0.00 32.12 2.10
3645 3731 9.515020 GAAAACATAAATCCATTGCGATTAGAA 57.485 29.630 0.00 0.00 32.12 2.10
3646 3732 9.868277 AAAACATAAATCCATTGCGATTAGAAA 57.132 25.926 0.00 0.00 32.12 2.52
3647 3733 8.856490 AACATAAATCCATTGCGATTAGAAAC 57.144 30.769 0.00 0.00 32.12 2.78
3648 3734 7.425606 ACATAAATCCATTGCGATTAGAAACC 58.574 34.615 0.00 0.00 32.12 3.27
3649 3735 5.913137 AAATCCATTGCGATTAGAAACCA 57.087 34.783 0.00 0.00 32.12 3.67
3650 3736 5.505173 AATCCATTGCGATTAGAAACCAG 57.495 39.130 0.00 0.00 30.59 4.00
3651 3737 3.950397 TCCATTGCGATTAGAAACCAGT 58.050 40.909 0.00 0.00 0.00 4.00
3652 3738 3.689161 TCCATTGCGATTAGAAACCAGTG 59.311 43.478 0.00 0.00 0.00 3.66
3653 3739 3.689161 CCATTGCGATTAGAAACCAGTGA 59.311 43.478 0.00 0.00 0.00 3.41
3654 3740 4.437390 CCATTGCGATTAGAAACCAGTGAC 60.437 45.833 0.00 0.00 0.00 3.67
3655 3741 3.678056 TGCGATTAGAAACCAGTGACT 57.322 42.857 0.00 0.00 0.00 3.41
3656 3742 3.585862 TGCGATTAGAAACCAGTGACTC 58.414 45.455 0.00 0.00 0.00 3.36
3657 3743 3.258372 TGCGATTAGAAACCAGTGACTCT 59.742 43.478 0.00 0.00 0.00 3.24
3658 3744 4.461431 TGCGATTAGAAACCAGTGACTCTA 59.539 41.667 0.00 0.00 0.00 2.43
3659 3745 4.799428 GCGATTAGAAACCAGTGACTCTAC 59.201 45.833 0.00 0.00 0.00 2.59
3660 3746 5.621555 GCGATTAGAAACCAGTGACTCTACA 60.622 44.000 0.00 0.00 0.00 2.74
3661 3747 6.030849 CGATTAGAAACCAGTGACTCTACAG 58.969 44.000 0.00 0.00 0.00 2.74
3662 3748 3.669251 AGAAACCAGTGACTCTACAGC 57.331 47.619 0.00 0.00 0.00 4.40
3663 3749 2.300437 AGAAACCAGTGACTCTACAGCC 59.700 50.000 0.00 0.00 0.00 4.85
3664 3750 1.717032 AACCAGTGACTCTACAGCCA 58.283 50.000 0.00 0.00 0.00 4.75
3665 3751 1.261480 ACCAGTGACTCTACAGCCAG 58.739 55.000 0.00 0.00 0.00 4.85
3666 3752 0.534412 CCAGTGACTCTACAGCCAGG 59.466 60.000 0.00 0.00 0.00 4.45
3667 3753 0.534412 CAGTGACTCTACAGCCAGGG 59.466 60.000 0.00 0.00 0.00 4.45
3668 3754 1.219393 GTGACTCTACAGCCAGGGC 59.781 63.158 0.97 0.97 42.33 5.19
3679 3765 3.933722 CCAGGGCTCGATGGCGAT 61.934 66.667 0.00 0.00 46.80 4.58
3680 3766 2.664185 CAGGGCTCGATGGCGATG 60.664 66.667 0.00 0.00 46.80 3.84
3681 3767 3.157252 AGGGCTCGATGGCGATGT 61.157 61.111 0.00 0.00 46.80 3.06
3682 3768 1.832608 AGGGCTCGATGGCGATGTA 60.833 57.895 0.00 0.00 46.80 2.29
3683 3769 1.069090 GGGCTCGATGGCGATGTAA 59.931 57.895 0.00 0.00 46.80 2.41
3684 3770 0.946221 GGGCTCGATGGCGATGTAAG 60.946 60.000 0.00 0.00 46.80 2.34
3685 3771 0.032130 GGCTCGATGGCGATGTAAGA 59.968 55.000 0.00 0.00 46.80 2.10
3686 3772 1.337260 GGCTCGATGGCGATGTAAGAT 60.337 52.381 0.00 0.00 46.80 2.40
3687 3773 2.094700 GGCTCGATGGCGATGTAAGATA 60.095 50.000 0.00 0.00 46.80 1.98
3688 3774 3.175152 GCTCGATGGCGATGTAAGATAG 58.825 50.000 0.00 0.00 46.80 2.08
3689 3775 3.119814 GCTCGATGGCGATGTAAGATAGA 60.120 47.826 0.00 0.00 46.80 1.98
3690 3776 4.616143 GCTCGATGGCGATGTAAGATAGAA 60.616 45.833 0.00 0.00 46.80 2.10
3691 3777 5.447624 TCGATGGCGATGTAAGATAGAAA 57.552 39.130 0.00 0.00 42.51 2.52
3692 3778 5.461526 TCGATGGCGATGTAAGATAGAAAG 58.538 41.667 0.00 0.00 42.51 2.62
3693 3779 5.240844 TCGATGGCGATGTAAGATAGAAAGA 59.759 40.000 0.00 0.00 42.51 2.52
3694 3780 5.920840 CGATGGCGATGTAAGATAGAAAGAA 59.079 40.000 0.00 0.00 40.82 2.52
3695 3781 6.587990 CGATGGCGATGTAAGATAGAAAGAAT 59.412 38.462 0.00 0.00 40.82 2.40
3696 3782 7.411264 CGATGGCGATGTAAGATAGAAAGAATG 60.411 40.741 0.00 0.00 40.82 2.67
3697 3783 5.991606 TGGCGATGTAAGATAGAAAGAATGG 59.008 40.000 0.00 0.00 0.00 3.16
3698 3784 5.409826 GGCGATGTAAGATAGAAAGAATGGG 59.590 44.000 0.00 0.00 0.00 4.00
3699 3785 5.409826 GCGATGTAAGATAGAAAGAATGGGG 59.590 44.000 0.00 0.00 0.00 4.96
3700 3786 6.741521 GCGATGTAAGATAGAAAGAATGGGGA 60.742 42.308 0.00 0.00 0.00 4.81
3701 3787 6.870965 CGATGTAAGATAGAAAGAATGGGGAG 59.129 42.308 0.00 0.00 0.00 4.30
3702 3788 7.472100 CGATGTAAGATAGAAAGAATGGGGAGT 60.472 40.741 0.00 0.00 0.00 3.85
3703 3789 7.510675 TGTAAGATAGAAAGAATGGGGAGTT 57.489 36.000 0.00 0.00 0.00 3.01
3704 3790 8.618240 TGTAAGATAGAAAGAATGGGGAGTTA 57.382 34.615 0.00 0.00 0.00 2.24
3705 3791 8.705594 TGTAAGATAGAAAGAATGGGGAGTTAG 58.294 37.037 0.00 0.00 0.00 2.34
3706 3792 6.755542 AGATAGAAAGAATGGGGAGTTAGG 57.244 41.667 0.00 0.00 0.00 2.69
3707 3793 5.608860 AGATAGAAAGAATGGGGAGTTAGGG 59.391 44.000 0.00 0.00 0.00 3.53
3708 3794 2.242452 AGAAAGAATGGGGAGTTAGGGC 59.758 50.000 0.00 0.00 0.00 5.19
3709 3795 1.987080 AAGAATGGGGAGTTAGGGCT 58.013 50.000 0.00 0.00 0.00 5.19
3710 3796 1.987080 AGAATGGGGAGTTAGGGCTT 58.013 50.000 0.00 0.00 0.00 4.35
3711 3797 1.847088 AGAATGGGGAGTTAGGGCTTC 59.153 52.381 0.00 0.00 0.00 3.86
3712 3798 0.546598 AATGGGGAGTTAGGGCTTCG 59.453 55.000 0.00 0.00 0.00 3.79
3713 3799 1.345715 ATGGGGAGTTAGGGCTTCGG 61.346 60.000 0.00 0.00 0.00 4.30
3714 3800 1.993948 GGGGAGTTAGGGCTTCGGT 60.994 63.158 0.00 0.00 0.00 4.69
3715 3801 1.559965 GGGGAGTTAGGGCTTCGGTT 61.560 60.000 0.00 0.00 0.00 4.44
3716 3802 0.327259 GGGAGTTAGGGCTTCGGTTT 59.673 55.000 0.00 0.00 0.00 3.27
3717 3803 1.678123 GGGAGTTAGGGCTTCGGTTTC 60.678 57.143 0.00 0.00 0.00 2.78
3718 3804 1.678123 GGAGTTAGGGCTTCGGTTTCC 60.678 57.143 0.00 0.00 0.00 3.13
3719 3805 1.278413 GAGTTAGGGCTTCGGTTTCCT 59.722 52.381 0.00 0.00 0.00 3.36
3720 3806 1.278413 AGTTAGGGCTTCGGTTTCCTC 59.722 52.381 0.00 0.00 0.00 3.71
3721 3807 1.278413 GTTAGGGCTTCGGTTTCCTCT 59.722 52.381 0.00 0.00 0.00 3.69
3722 3808 0.902531 TAGGGCTTCGGTTTCCTCTG 59.097 55.000 0.00 0.00 0.00 3.35
3723 3809 1.128188 AGGGCTTCGGTTTCCTCTGT 61.128 55.000 0.00 0.00 0.00 3.41
3724 3810 0.611714 GGGCTTCGGTTTCCTCTGTA 59.388 55.000 0.00 0.00 0.00 2.74
3725 3811 1.405661 GGGCTTCGGTTTCCTCTGTAG 60.406 57.143 0.00 0.00 0.00 2.74
3726 3812 1.360820 GCTTCGGTTTCCTCTGTAGC 58.639 55.000 0.00 0.00 32.02 3.58
3727 3813 2.007547 GCTTCGGTTTCCTCTGTAGCC 61.008 57.143 0.00 0.00 33.18 3.93
3728 3814 1.275291 CTTCGGTTTCCTCTGTAGCCA 59.725 52.381 0.00 0.00 0.00 4.75
3729 3815 0.895530 TCGGTTTCCTCTGTAGCCAG 59.104 55.000 0.00 0.00 40.25 4.85
3730 3816 0.608640 CGGTTTCCTCTGTAGCCAGT 59.391 55.000 0.00 0.00 39.82 4.00
3731 3817 1.002087 CGGTTTCCTCTGTAGCCAGTT 59.998 52.381 0.00 0.00 39.82 3.16
3732 3818 2.550208 CGGTTTCCTCTGTAGCCAGTTT 60.550 50.000 0.00 0.00 39.82 2.66
3733 3819 3.075148 GGTTTCCTCTGTAGCCAGTTTC 58.925 50.000 0.00 0.00 39.82 2.78
3734 3820 3.496160 GGTTTCCTCTGTAGCCAGTTTCA 60.496 47.826 0.00 0.00 39.82 2.69
3735 3821 4.134563 GTTTCCTCTGTAGCCAGTTTCAA 58.865 43.478 0.00 0.00 39.82 2.69
3736 3822 4.640771 TTCCTCTGTAGCCAGTTTCAAT 57.359 40.909 0.00 0.00 39.82 2.57
3737 3823 4.640771 TCCTCTGTAGCCAGTTTCAATT 57.359 40.909 0.00 0.00 39.82 2.32
3738 3824 4.579869 TCCTCTGTAGCCAGTTTCAATTC 58.420 43.478 0.00 0.00 39.82 2.17
3739 3825 3.691609 CCTCTGTAGCCAGTTTCAATTCC 59.308 47.826 0.00 0.00 39.82 3.01
3740 3826 4.326826 CTCTGTAGCCAGTTTCAATTCCA 58.673 43.478 0.00 0.00 39.82 3.53
3741 3827 4.724399 TCTGTAGCCAGTTTCAATTCCAA 58.276 39.130 0.00 0.00 39.82 3.53
3742 3828 5.136828 TCTGTAGCCAGTTTCAATTCCAAA 58.863 37.500 0.00 0.00 39.82 3.28
3743 3829 5.774690 TCTGTAGCCAGTTTCAATTCCAAAT 59.225 36.000 0.00 0.00 39.82 2.32
3744 3830 6.024552 TGTAGCCAGTTTCAATTCCAAATC 57.975 37.500 0.00 0.00 0.00 2.17
3745 3831 5.538053 TGTAGCCAGTTTCAATTCCAAATCA 59.462 36.000 0.00 0.00 0.00 2.57
3746 3832 5.750352 AGCCAGTTTCAATTCCAAATCAT 57.250 34.783 0.00 0.00 0.00 2.45
3747 3833 6.117975 AGCCAGTTTCAATTCCAAATCATT 57.882 33.333 0.00 0.00 0.00 2.57
3748 3834 6.536447 AGCCAGTTTCAATTCCAAATCATTT 58.464 32.000 0.00 0.00 0.00 2.32
3749 3835 6.428771 AGCCAGTTTCAATTCCAAATCATTTG 59.571 34.615 2.80 2.80 40.32 2.32
3750 3836 6.604930 CCAGTTTCAATTCCAAATCATTTGC 58.395 36.000 4.40 0.00 39.31 3.68
3751 3837 6.348704 CCAGTTTCAATTCCAAATCATTTGCC 60.349 38.462 4.40 0.00 39.31 4.52
3752 3838 5.409214 AGTTTCAATTCCAAATCATTTGCCG 59.591 36.000 4.40 0.00 39.31 5.69
3753 3839 4.797800 TCAATTCCAAATCATTTGCCGA 57.202 36.364 4.40 0.00 39.31 5.54
3754 3840 4.493547 TCAATTCCAAATCATTTGCCGAC 58.506 39.130 4.40 0.00 39.31 4.79
3755 3841 4.021632 TCAATTCCAAATCATTTGCCGACA 60.022 37.500 4.40 0.00 39.31 4.35
3756 3842 4.741321 ATTCCAAATCATTTGCCGACAT 57.259 36.364 4.40 0.00 39.31 3.06
3757 3843 3.507103 TCCAAATCATTTGCCGACATG 57.493 42.857 4.40 0.00 39.31 3.21
3758 3844 1.928503 CCAAATCATTTGCCGACATGC 59.071 47.619 4.40 0.00 39.31 4.06
3759 3845 1.584761 CAAATCATTTGCCGACATGCG 59.415 47.619 0.00 0.00 40.47 4.73
3768 3854 3.093278 CGACATGCGGCTTCCTTC 58.907 61.111 0.00 0.00 36.03 3.46
3769 3855 2.464459 CGACATGCGGCTTCCTTCC 61.464 63.158 0.00 0.00 36.03 3.46
3770 3856 2.044946 ACATGCGGCTTCCTTCCC 60.045 61.111 0.00 0.00 0.00 3.97
3771 3857 2.273449 CATGCGGCTTCCTTCCCT 59.727 61.111 0.00 0.00 0.00 4.20
3772 3858 1.821332 CATGCGGCTTCCTTCCCTC 60.821 63.158 0.00 0.00 0.00 4.30
3773 3859 3.049080 ATGCGGCTTCCTTCCCTCC 62.049 63.158 0.00 0.00 0.00 4.30
3774 3860 3.403558 GCGGCTTCCTTCCCTCCT 61.404 66.667 0.00 0.00 0.00 3.69
3775 3861 2.904131 CGGCTTCCTTCCCTCCTC 59.096 66.667 0.00 0.00 0.00 3.71
3776 3862 2.904131 GGCTTCCTTCCCTCCTCG 59.096 66.667 0.00 0.00 0.00 4.63
3777 3863 1.686110 GGCTTCCTTCCCTCCTCGA 60.686 63.158 0.00 0.00 0.00 4.04
3778 3864 1.265454 GGCTTCCTTCCCTCCTCGAA 61.265 60.000 0.00 0.00 0.00 3.71
3779 3865 0.176910 GCTTCCTTCCCTCCTCGAAG 59.823 60.000 0.00 0.00 37.14 3.79
3780 3866 0.176910 CTTCCTTCCCTCCTCGAAGC 59.823 60.000 0.00 0.00 36.26 3.86
3781 3867 0.544357 TTCCTTCCCTCCTCGAAGCA 60.544 55.000 0.00 0.00 36.26 3.91
3782 3868 0.972983 TCCTTCCCTCCTCGAAGCAG 60.973 60.000 0.00 0.00 36.26 4.24
3783 3869 1.519719 CTTCCCTCCTCGAAGCAGG 59.480 63.158 0.00 0.00 31.02 4.85
3784 3870 2.585791 CTTCCCTCCTCGAAGCAGGC 62.586 65.000 0.00 0.00 32.91 4.85
3785 3871 3.080121 CCCTCCTCGAAGCAGGCT 61.080 66.667 0.00 0.00 32.91 4.58
3786 3872 2.664081 CCCTCCTCGAAGCAGGCTT 61.664 63.158 6.17 6.17 39.23 4.35
3787 3873 1.298014 CCTCCTCGAAGCAGGCTTT 59.702 57.895 8.09 0.00 36.26 3.51
3788 3874 0.742635 CCTCCTCGAAGCAGGCTTTC 60.743 60.000 8.09 1.29 36.26 2.62
3789 3875 1.079819 TCCTCGAAGCAGGCTTTCG 60.080 57.895 13.71 13.71 36.26 3.46
3790 3876 2.744768 CCTCGAAGCAGGCTTTCGC 61.745 63.158 14.79 1.90 36.26 4.70
3800 3886 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
3801 3887 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
3802 3888 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
3803 3889 2.419667 GCTTTCGCCCCGCTTTATATA 58.580 47.619 0.00 0.00 0.00 0.86
3804 3890 3.007635 GCTTTCGCCCCGCTTTATATAT 58.992 45.455 0.00 0.00 0.00 0.86
3805 3891 4.186159 GCTTTCGCCCCGCTTTATATATA 58.814 43.478 0.00 0.00 0.00 0.86
3806 3892 4.632688 GCTTTCGCCCCGCTTTATATATAA 59.367 41.667 0.81 0.81 0.00 0.98
3807 3893 5.122711 GCTTTCGCCCCGCTTTATATATAAA 59.877 40.000 15.47 15.47 0.00 1.40
3841 3927 8.393366 TCGTATGCGTACCTTTATATATCAGAC 58.607 37.037 10.49 0.00 39.49 3.51
3911 3997 3.063485 GAGTCTGAGCAGAGGTGTTTTC 58.937 50.000 0.00 0.00 38.27 2.29
3937 4025 9.573166 CCCCATTATGTCTTATCACTCAAATAA 57.427 33.333 0.00 0.00 0.00 1.40
3991 4079 4.724074 ATCAACATAATGCACCAGTTGG 57.276 40.909 17.60 0.00 39.84 3.77
3993 4081 1.851304 ACATAATGCACCAGTTGGGG 58.149 50.000 2.79 0.00 42.91 4.96
3996 4084 3.245443 ACATAATGCACCAGTTGGGGTTA 60.245 43.478 1.81 0.00 41.84 2.85
4006 4094 7.181125 TGCACCAGTTGGGGTTATTTTATTATT 59.819 33.333 1.81 0.00 41.84 1.40
4093 4181 9.853177 AATAAATGGGAGATGGAAACTACTAAG 57.147 33.333 0.00 0.00 0.00 2.18
4095 4183 7.698163 AATGGGAGATGGAAACTACTAAGAT 57.302 36.000 0.00 0.00 0.00 2.40
4106 4194 3.288964 ACTACTAAGATGCGCACTAGGT 58.711 45.455 14.90 15.43 0.00 3.08
4117 4205 6.992715 AGATGCGCACTAGGTATTCTTATTTT 59.007 34.615 14.90 0.00 0.00 1.82
4257 4375 5.063944 GCACTTAGTGTATGAAGGACATGTG 59.936 44.000 14.23 0.00 35.42 3.21
4891 5015 1.269166 GAACTGTAGATGCACGACCG 58.731 55.000 0.00 0.00 0.00 4.79
5040 5166 1.337118 TCAAACCATCCTTGCCCAAC 58.663 50.000 0.00 0.00 0.00 3.77
5053 5179 2.795329 TGCCCAACTTCATTCCTCTTC 58.205 47.619 0.00 0.00 0.00 2.87
5174 5300 7.909463 TGGGTGAAATGGTATATCAGGGATATA 59.091 37.037 2.60 2.60 36.70 0.86
5529 5655 4.034510 CGATTACAAAGTCTGCATCTTCCC 59.965 45.833 5.05 0.00 0.00 3.97
5716 5883 9.959721 AATTTCTTCTACAGTTATCCTAAAGCA 57.040 29.630 0.00 0.00 0.00 3.91
5729 5970 5.546621 TCCTAAAGCATGGTACCATACTC 57.453 43.478 26.91 17.77 34.91 2.59
5735 5976 2.921069 GCATGGTACCATACTCGTAGCG 60.921 54.545 26.91 12.31 37.08 4.26
5792 6033 1.202604 TCAACCTGGAAGACGTTGGTC 60.203 52.381 0.00 0.00 43.76 4.02
5812 6053 9.406828 GTTGGTCTTGTATGTATTTTTCCTTTC 57.593 33.333 0.00 0.00 0.00 2.62
5862 6103 0.393132 GAACTAACCTGCAGGGAGCC 60.393 60.000 35.42 21.37 44.83 4.70
5863 6104 1.133809 AACTAACCTGCAGGGAGCCA 61.134 55.000 35.42 14.67 44.83 4.75
5864 6105 1.078143 CTAACCTGCAGGGAGCCAC 60.078 63.158 35.42 0.00 44.83 5.01
5865 6106 1.538876 TAACCTGCAGGGAGCCACT 60.539 57.895 35.42 11.03 44.83 4.00
5866 6107 1.133809 TAACCTGCAGGGAGCCACTT 61.134 55.000 35.42 20.80 44.83 3.16
5867 6108 2.360852 CCTGCAGGGAGCCACTTG 60.361 66.667 26.14 0.00 44.83 3.16
5868 6109 2.360852 CTGCAGGGAGCCACTTGG 60.361 66.667 5.57 0.00 44.83 3.61
5869 6110 3.933048 CTGCAGGGAGCCACTTGGG 62.933 68.421 5.57 0.00 44.83 4.12
5879 6120 2.990967 CACTTGGGCCGGCACAAT 60.991 61.111 42.20 28.52 38.79 2.71
5880 6121 2.990967 ACTTGGGCCGGCACAATG 60.991 61.111 42.20 34.05 38.79 2.82
5881 6122 2.990967 CTTGGGCCGGCACAATGT 60.991 61.111 42.20 0.00 38.79 2.71
5882 6123 2.522923 TTGGGCCGGCACAATGTT 60.523 55.556 39.58 0.00 33.98 2.71
5883 6124 1.228583 TTGGGCCGGCACAATGTTA 60.229 52.632 39.58 19.15 33.98 2.41
5884 6125 1.247419 TTGGGCCGGCACAATGTTAG 61.247 55.000 39.58 0.00 33.98 2.34
5885 6126 2.489751 GGCCGGCACAATGTTAGC 59.510 61.111 30.85 1.84 0.00 3.09
5886 6127 2.339556 GGCCGGCACAATGTTAGCA 61.340 57.895 30.85 0.00 0.00 3.49
5887 6128 1.583986 GCCGGCACAATGTTAGCAA 59.416 52.632 24.80 0.00 0.00 3.91
5888 6129 0.732538 GCCGGCACAATGTTAGCAAC 60.733 55.000 24.80 0.00 0.00 4.17
5889 6130 0.454285 CCGGCACAATGTTAGCAACG 60.454 55.000 0.00 0.00 0.00 4.10
5890 6131 0.454285 CGGCACAATGTTAGCAACGG 60.454 55.000 0.00 0.00 0.00 4.44
5891 6132 0.878416 GGCACAATGTTAGCAACGGA 59.122 50.000 0.00 0.00 0.00 4.69
5892 6133 1.268352 GGCACAATGTTAGCAACGGAA 59.732 47.619 0.00 0.00 0.00 4.30
5893 6134 2.584791 GCACAATGTTAGCAACGGAAG 58.415 47.619 0.00 0.00 0.00 3.46
5894 6135 2.668279 GCACAATGTTAGCAACGGAAGG 60.668 50.000 0.00 0.00 0.00 3.46
5895 6136 2.811431 CACAATGTTAGCAACGGAAGGA 59.189 45.455 0.00 0.00 0.00 3.36
5896 6137 2.812011 ACAATGTTAGCAACGGAAGGAC 59.188 45.455 0.00 0.00 0.00 3.85
5897 6138 2.109425 ATGTTAGCAACGGAAGGACC 57.891 50.000 0.00 0.00 0.00 4.46
5898 6139 1.053424 TGTTAGCAACGGAAGGACCT 58.947 50.000 0.00 0.00 36.31 3.85
5899 6140 1.001633 TGTTAGCAACGGAAGGACCTC 59.998 52.381 0.00 0.00 36.31 3.85
5934 6175 1.576421 CTTTGGTCTCGCAACAGGC 59.424 57.895 0.00 0.00 39.90 4.85
5983 6224 2.424601 CCGGTACCGAGACATAACTTGA 59.575 50.000 35.41 0.00 42.83 3.02
6045 6286 3.799420 CGTAGCACCTCTAGCTTGATTTC 59.201 47.826 0.00 0.00 43.25 2.17
6046 6287 4.440802 CGTAGCACCTCTAGCTTGATTTCT 60.441 45.833 0.00 0.00 43.25 2.52
6047 6288 4.135747 AGCACCTCTAGCTTGATTTCTC 57.864 45.455 0.00 0.00 39.87 2.87
6048 6289 3.774216 AGCACCTCTAGCTTGATTTCTCT 59.226 43.478 0.00 0.00 39.87 3.10
6049 6290 4.119136 GCACCTCTAGCTTGATTTCTCTC 58.881 47.826 0.00 0.00 0.00 3.20
6050 6291 4.141959 GCACCTCTAGCTTGATTTCTCTCT 60.142 45.833 0.00 0.00 0.00 3.10
6051 6292 5.591099 CACCTCTAGCTTGATTTCTCTCTC 58.409 45.833 0.00 0.00 0.00 3.20
6052 6293 5.360714 CACCTCTAGCTTGATTTCTCTCTCT 59.639 44.000 0.00 0.00 0.00 3.10
6053 6294 5.594317 ACCTCTAGCTTGATTTCTCTCTCTC 59.406 44.000 0.00 0.00 0.00 3.20
6054 6295 5.829924 CCTCTAGCTTGATTTCTCTCTCTCT 59.170 44.000 0.00 0.00 0.00 3.10
6055 6296 6.016777 CCTCTAGCTTGATTTCTCTCTCTCTC 60.017 46.154 0.00 0.00 0.00 3.20
6056 6297 6.662755 TCTAGCTTGATTTCTCTCTCTCTCT 58.337 40.000 0.00 0.00 0.00 3.10
6057 6298 5.841957 AGCTTGATTTCTCTCTCTCTCTC 57.158 43.478 0.00 0.00 0.00 3.20
6058 6299 5.513233 AGCTTGATTTCTCTCTCTCTCTCT 58.487 41.667 0.00 0.00 0.00 3.10
6059 6300 5.591877 AGCTTGATTTCTCTCTCTCTCTCTC 59.408 44.000 0.00 0.00 0.00 3.20
6060 6301 5.591877 GCTTGATTTCTCTCTCTCTCTCTCT 59.408 44.000 0.00 0.00 0.00 3.10
6061 6302 6.238593 GCTTGATTTCTCTCTCTCTCTCTCTC 60.239 46.154 0.00 0.00 0.00 3.20
6062 6303 6.566079 TGATTTCTCTCTCTCTCTCTCTCT 57.434 41.667 0.00 0.00 0.00 3.10
6063 6304 6.586344 TGATTTCTCTCTCTCTCTCTCTCTC 58.414 44.000 0.00 0.00 0.00 3.20
6220 6466 7.575332 TTTCAGTTTCCTTTTGTTTTCTTCG 57.425 32.000 0.00 0.00 0.00 3.79
6221 6467 6.262193 TCAGTTTCCTTTTGTTTTCTTCGT 57.738 33.333 0.00 0.00 0.00 3.85
6222 6468 6.319399 TCAGTTTCCTTTTGTTTTCTTCGTC 58.681 36.000 0.00 0.00 0.00 4.20
6223 6469 6.150474 TCAGTTTCCTTTTGTTTTCTTCGTCT 59.850 34.615 0.00 0.00 0.00 4.18
6224 6470 6.251376 CAGTTTCCTTTTGTTTTCTTCGTCTG 59.749 38.462 0.00 0.00 0.00 3.51
6225 6471 5.890424 TTCCTTTTGTTTTCTTCGTCTGT 57.110 34.783 0.00 0.00 0.00 3.41
6226 6472 5.890424 TCCTTTTGTTTTCTTCGTCTGTT 57.110 34.783 0.00 0.00 0.00 3.16
6227 6473 6.262193 TCCTTTTGTTTTCTTCGTCTGTTT 57.738 33.333 0.00 0.00 0.00 2.83
6228 6474 6.683715 TCCTTTTGTTTTCTTCGTCTGTTTT 58.316 32.000 0.00 0.00 0.00 2.43
6229 6475 7.149307 TCCTTTTGTTTTCTTCGTCTGTTTTT 58.851 30.769 0.00 0.00 0.00 1.94
6230 6476 7.327518 TCCTTTTGTTTTCTTCGTCTGTTTTTC 59.672 33.333 0.00 0.00 0.00 2.29
6557 6814 7.943079 TGTCATGAACATTTCCTTGATATGT 57.057 32.000 0.00 0.00 36.18 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 0.474854 TGGCAAGGAGGGTACTTCCA 60.475 55.000 16.04 0.00 38.11 3.53
40 41 0.035343 GTGGCAAGGAGGGTACTTCC 60.035 60.000 8.40 8.40 0.00 3.46
52 53 1.088340 CAGCTCATCGGAGTGGCAAG 61.088 60.000 0.00 0.00 43.37 4.01
59 60 0.390866 AGTTGTGCAGCTCATCGGAG 60.391 55.000 0.00 0.00 44.33 4.63
70 71 3.135712 TCTTTCCTAAGTCCAGTTGTGCA 59.864 43.478 0.00 0.00 32.98 4.57
71 72 3.740115 TCTTTCCTAAGTCCAGTTGTGC 58.260 45.455 0.00 0.00 32.98 4.57
77 78 4.962995 TCCCTGTATCTTTCCTAAGTCCAG 59.037 45.833 0.00 0.00 32.98 3.86
96 97 3.721087 CCGGAGGCATATTATTTCCCT 57.279 47.619 0.00 0.00 46.14 4.20
124 125 3.793888 CCCCCTAACCGGACTGCC 61.794 72.222 9.46 0.00 33.16 4.85
154 155 0.748367 GCGGATCCCTTTGTCTTCCC 60.748 60.000 6.06 0.00 0.00 3.97
173 174 4.849329 GTCTACAGCCGGACGCGG 62.849 72.222 12.47 0.00 44.76 6.46
176 177 0.377554 CTACAGTCTACAGCCGGACG 59.622 60.000 5.05 0.00 37.52 4.79
178 179 1.271762 ACACTACAGTCTACAGCCGGA 60.272 52.381 5.05 0.00 0.00 5.14
217 221 2.737180 CACAGTCACACGGAGCCT 59.263 61.111 0.00 0.00 0.00 4.58
235 239 4.939509 AAACGATAACACTATGTGCACC 57.060 40.909 15.69 0.00 36.98 5.01
237 241 7.661127 AACTAAAACGATAACACTATGTGCA 57.339 32.000 0.00 0.00 36.98 4.57
271 275 6.442952 CCAAACGAGAATGGTTACATTTTGA 58.557 36.000 0.00 0.00 46.89 2.69
283 288 8.519492 AATTTCATACAAACCAAACGAGAATG 57.481 30.769 0.00 0.00 0.00 2.67
284 289 7.537306 CGAATTTCATACAAACCAAACGAGAAT 59.463 33.333 0.00 0.00 0.00 2.40
289 294 5.910166 TGACGAATTTCATACAAACCAAACG 59.090 36.000 0.00 0.00 0.00 3.60
292 297 6.976088 ACATGACGAATTTCATACAAACCAA 58.024 32.000 0.00 0.00 34.29 3.67
293 298 6.567687 ACATGACGAATTTCATACAAACCA 57.432 33.333 0.00 0.00 34.29 3.67
306 311 7.444183 ACCGGATTTCATATAAACATGACGAAT 59.556 33.333 9.46 0.00 34.69 3.34
307 312 6.764085 ACCGGATTTCATATAAACATGACGAA 59.236 34.615 9.46 0.00 34.69 3.85
308 313 6.285224 ACCGGATTTCATATAAACATGACGA 58.715 36.000 9.46 0.00 34.69 4.20
309 314 6.201997 TGACCGGATTTCATATAAACATGACG 59.798 38.462 9.46 0.00 34.69 4.35
310 315 7.490962 TGACCGGATTTCATATAAACATGAC 57.509 36.000 9.46 0.00 34.69 3.06
311 316 7.719193 ACATGACCGGATTTCATATAAACATGA 59.281 33.333 9.46 0.00 35.66 3.07
312 317 7.874940 ACATGACCGGATTTCATATAAACATG 58.125 34.615 9.46 0.00 37.06 3.21
313 318 8.352201 CAACATGACCGGATTTCATATAAACAT 58.648 33.333 9.46 0.00 32.23 2.71
314 319 7.680827 GCAACATGACCGGATTTCATATAAACA 60.681 37.037 9.46 0.00 32.23 2.83
315 320 6.636850 GCAACATGACCGGATTTCATATAAAC 59.363 38.462 9.46 0.00 32.23 2.01
316 321 6.238897 GGCAACATGACCGGATTTCATATAAA 60.239 38.462 9.46 0.00 32.23 1.40
317 322 5.240623 GGCAACATGACCGGATTTCATATAA 59.759 40.000 9.46 0.00 32.23 0.98
318 323 4.759693 GGCAACATGACCGGATTTCATATA 59.240 41.667 9.46 0.00 32.23 0.86
340 345 2.030007 ACAAACTGGATGAAACGCATGG 60.030 45.455 0.00 0.00 37.34 3.66
365 372 7.384932 GCTAGCCACATACATTTCAAACTTTTT 59.615 33.333 2.29 0.00 0.00 1.94
384 391 2.124736 GCCATCCAACGCTAGCCA 60.125 61.111 9.66 0.00 0.00 4.75
386 393 2.828128 GCTGCCATCCAACGCTAGC 61.828 63.158 4.06 4.06 0.00 3.42
391 398 1.817099 GAGAGGCTGCCATCCAACG 60.817 63.158 22.65 0.00 0.00 4.10
400 407 4.521062 ACGGATGCGAGAGGCTGC 62.521 66.667 15.49 0.00 44.05 5.25
402 409 3.069980 GACACGGATGCGAGAGGCT 62.070 63.158 15.49 0.00 44.05 4.58
403 410 2.583593 GACACGGATGCGAGAGGC 60.584 66.667 15.49 0.45 43.96 4.70
453 460 3.023832 CGCCCTGTAAATTTTCTCCCAT 58.976 45.455 0.00 0.00 0.00 4.00
454 461 2.442413 CGCCCTGTAAATTTTCTCCCA 58.558 47.619 0.00 0.00 0.00 4.37
458 465 0.808755 CCGCGCCCTGTAAATTTTCT 59.191 50.000 0.00 0.00 0.00 2.52
459 466 0.524414 ACCGCGCCCTGTAAATTTTC 59.476 50.000 0.00 0.00 0.00 2.29
472 479 4.179579 GGGCATCTTCAACCGCGC 62.180 66.667 0.00 0.00 0.00 6.86
488 495 1.165270 CGACTTTTGGCCCACTTAGG 58.835 55.000 0.00 0.00 37.03 2.69
496 503 1.068541 CCTTGTTAGCGACTTTTGGCC 60.069 52.381 0.00 0.00 0.00 5.36
497 504 1.607148 ACCTTGTTAGCGACTTTTGGC 59.393 47.619 0.00 0.00 0.00 4.52
513 520 1.131928 ACTTTACCTGGCCGGACCTT 61.132 55.000 15.09 0.00 40.22 3.50
514 521 1.538135 ACTTTACCTGGCCGGACCT 60.538 57.895 15.09 0.00 40.22 3.85
536 543 0.748005 AGGCACATGTACAATCGGCC 60.748 55.000 18.20 18.20 40.18 6.13
549 556 1.289066 GCGAGTGTGTCTAGGCACA 59.711 57.895 25.90 25.90 45.85 4.57
574 582 7.921041 TCTCTCTAATCATCCAAACATAGGT 57.079 36.000 0.00 0.00 0.00 3.08
578 586 9.152327 TCACTATCTCTCTAATCATCCAAACAT 57.848 33.333 0.00 0.00 0.00 2.71
579 587 8.539117 TCACTATCTCTCTAATCATCCAAACA 57.461 34.615 0.00 0.00 0.00 2.83
589 597 9.640952 GGGCTAGAATATCACTATCTCTCTAAT 57.359 37.037 0.00 0.00 0.00 1.73
593 601 7.559533 TGATGGGCTAGAATATCACTATCTCTC 59.440 40.741 0.00 0.00 0.00 3.20
599 607 6.025539 ACCATGATGGGCTAGAATATCACTA 58.974 40.000 17.04 0.00 43.37 2.74
608 616 4.464008 GATTTGAACCATGATGGGCTAGA 58.536 43.478 17.04 0.00 43.37 2.43
610 618 3.565307 GGATTTGAACCATGATGGGCTA 58.435 45.455 17.04 1.60 43.37 3.93
613 621 1.682854 CGGGATTTGAACCATGATGGG 59.317 52.381 17.04 0.00 43.37 4.00
617 625 2.023673 GCATCGGGATTTGAACCATGA 58.976 47.619 0.00 0.00 0.00 3.07
620 628 2.917933 CTAGCATCGGGATTTGAACCA 58.082 47.619 0.00 0.00 0.00 3.67
632 640 7.935338 AAATCCAAAAATAATGCTAGCATCG 57.065 32.000 29.67 12.18 35.31 3.84
648 656 6.816140 GCCGGAATTTCTGAAATAAATCCAAA 59.184 34.615 22.63 0.00 0.00 3.28
649 657 6.337356 GCCGGAATTTCTGAAATAAATCCAA 58.663 36.000 22.63 0.00 0.00 3.53
652 660 5.816919 TCGCCGGAATTTCTGAAATAAATC 58.183 37.500 15.45 9.77 0.00 2.17
661 669 1.010797 CGCATCGCCGGAATTTCTG 60.011 57.895 5.05 0.00 0.00 3.02
720 728 5.292101 GTGAGATTTTCCAAGTCATCGTAGG 59.708 44.000 0.00 0.00 0.00 3.18
743 751 3.056749 GGACTAAGCCGGAATATCATCGT 60.057 47.826 5.05 0.00 0.00 3.73
744 752 3.512680 GGACTAAGCCGGAATATCATCG 58.487 50.000 5.05 0.00 0.00 3.84
753 761 0.612732 TTTCGAGGGACTAAGCCGGA 60.613 55.000 5.05 0.00 41.55 5.14
755 763 1.933853 CATTTTCGAGGGACTAAGCCG 59.066 52.381 0.00 0.00 41.55 5.52
757 765 6.679327 ATTAACATTTTCGAGGGACTAAGC 57.321 37.500 0.00 0.00 41.55 3.09
760 768 6.384886 ACCCTATTAACATTTTCGAGGGACTA 59.615 38.462 10.99 0.00 44.27 2.59
776 784 5.034200 ACACATCACACCCTACCCTATTAA 58.966 41.667 0.00 0.00 0.00 1.40
778 786 3.199946 CACACATCACACCCTACCCTATT 59.800 47.826 0.00 0.00 0.00 1.73
794 803 4.080129 ACTCATCCCTATGAAAGCACACAT 60.080 41.667 0.00 0.00 41.57 3.21
796 805 3.624861 CACTCATCCCTATGAAAGCACAC 59.375 47.826 0.00 0.00 41.57 3.82
802 811 3.216800 GCATGCACTCATCCCTATGAAA 58.783 45.455 14.21 0.00 41.57 2.69
805 814 1.154197 CGCATGCACTCATCCCTATG 58.846 55.000 19.57 0.00 0.00 2.23
809 818 2.455674 TATACGCATGCACTCATCCC 57.544 50.000 19.57 0.00 0.00 3.85
819 828 8.229811 ACACAAATGCTTATACATATACGCATG 58.770 33.333 18.38 13.15 46.70 4.06
824 833 8.306680 ACGGACACAAATGCTTATACATATAC 57.693 34.615 0.00 0.00 0.00 1.47
826 835 7.386848 GGTACGGACACAAATGCTTATACATAT 59.613 37.037 0.00 0.00 0.00 1.78
868 879 7.072030 GCAAATGTAAACTGAGTGTGTCTTAG 58.928 38.462 0.00 0.00 36.10 2.18
869 880 6.292649 CGCAAATGTAAACTGAGTGTGTCTTA 60.293 38.462 0.00 0.00 0.00 2.10
870 881 5.504010 CGCAAATGTAAACTGAGTGTGTCTT 60.504 40.000 0.00 0.00 0.00 3.01
908 919 7.097490 CGAAAAACAACATTGCTAAATTGTTGC 60.097 33.333 13.29 6.01 42.82 4.17
909 920 7.097490 GCGAAAAACAACATTGCTAAATTGTTG 60.097 33.333 12.12 12.12 42.82 3.33
912 925 5.555927 CGCGAAAAACAACATTGCTAAATTG 59.444 36.000 0.00 0.00 0.00 2.32
921 934 2.726633 CCTCACGCGAAAAACAACATT 58.273 42.857 15.93 0.00 0.00 2.71
973 986 4.171878 TGTAAATTGGTTCTGGGACACA 57.828 40.909 0.00 0.00 0.00 3.72
1025 1039 3.327172 AGCAGTCAATGGGAGAGGATATG 59.673 47.826 0.00 0.00 0.00 1.78
1027 1041 2.702478 CAGCAGTCAATGGGAGAGGATA 59.298 50.000 0.00 0.00 0.00 2.59
1028 1042 1.489649 CAGCAGTCAATGGGAGAGGAT 59.510 52.381 0.00 0.00 0.00 3.24
1029 1043 0.907486 CAGCAGTCAATGGGAGAGGA 59.093 55.000 0.00 0.00 0.00 3.71
1030 1044 0.747283 GCAGCAGTCAATGGGAGAGG 60.747 60.000 0.00 0.00 0.00 3.69
1031 1045 0.035725 TGCAGCAGTCAATGGGAGAG 60.036 55.000 0.00 0.00 0.00 3.20
1032 1046 0.321919 GTGCAGCAGTCAATGGGAGA 60.322 55.000 0.00 0.00 0.00 3.71
1033 1047 1.310933 GGTGCAGCAGTCAATGGGAG 61.311 60.000 11.86 0.00 0.00 4.30
1034 1048 1.303561 GGTGCAGCAGTCAATGGGA 60.304 57.895 11.86 0.00 0.00 4.37
1035 1049 2.345760 GGGTGCAGCAGTCAATGGG 61.346 63.158 19.06 0.00 0.00 4.00
1036 1050 2.345760 GGGGTGCAGCAGTCAATGG 61.346 63.158 19.06 0.00 0.00 3.16
1037 1051 2.345760 GGGGGTGCAGCAGTCAATG 61.346 63.158 19.06 0.00 0.00 2.82
1038 1052 2.036256 GGGGGTGCAGCAGTCAAT 59.964 61.111 19.06 0.00 0.00 2.57
1039 1053 3.496309 CTGGGGGTGCAGCAGTCAA 62.496 63.158 19.06 0.00 0.00 3.18
1402 1432 5.582689 AGCCTAAACAGCCATCAAAATAC 57.417 39.130 0.00 0.00 0.00 1.89
1409 1439 4.455606 AGAACATAGCCTAAACAGCCATC 58.544 43.478 0.00 0.00 0.00 3.51
1507 1537 1.470285 CGCCTGAAAGAATTGCCATGG 60.470 52.381 7.63 7.63 34.07 3.66
1575 1605 2.293122 TGGCAATTTCTTCAGGAACACG 59.707 45.455 0.00 0.00 33.13 4.49
1626 1656 1.985447 AAGCATGGCATCTGCGAACG 61.985 55.000 7.38 0.00 44.38 3.95
1674 1704 5.923204 AGAAGCATCTACTCACAAATAGGG 58.077 41.667 0.00 0.00 32.88 3.53
1682 1712 7.010923 CCTTAACATGAAGAAGCATCTACTCAC 59.989 40.741 0.00 0.00 33.77 3.51
1696 1728 3.081804 ACGGCTTTCCCTTAACATGAAG 58.918 45.455 0.00 0.00 0.00 3.02
1701 1733 0.393820 ACGACGGCTTTCCCTTAACA 59.606 50.000 0.00 0.00 0.00 2.41
1702 1734 1.073964 GACGACGGCTTTCCCTTAAC 58.926 55.000 0.00 0.00 0.00 2.01
1768 1803 1.452108 AGGCGCCCTGTCAATTAGC 60.452 57.895 26.15 0.00 29.57 3.09
2240 2276 7.791029 TGCAGACAGAAAAGATACATATGGTA 58.209 34.615 7.80 0.00 36.16 3.25
2621 2657 8.773645 CGTGATGTACCATCATATACACAAAAT 58.226 33.333 9.88 0.00 34.24 1.82
2708 2744 6.690098 CACACAACTATTTTCTAGATGCATGC 59.310 38.462 11.82 11.82 0.00 4.06
2747 2783 8.082852 CACGCCATATATACTTCCTATATCCAC 58.917 40.741 0.00 0.00 31.47 4.02
2997 3078 6.235231 TGAATCCAAACTACTACCTCCATC 57.765 41.667 0.00 0.00 0.00 3.51
3113 3194 9.890629 AAGCATAGTCAAATTTCTCAGTGTATA 57.109 29.630 0.00 0.00 0.00 1.47
3115 3196 8.621532 AAAGCATAGTCAAATTTCTCAGTGTA 57.378 30.769 0.00 0.00 0.00 2.90
3189 3270 7.751732 TCAGAATCAAATTTCCATACAACGAG 58.248 34.615 0.00 0.00 0.00 4.18
3191 3272 7.530010 ACTCAGAATCAAATTTCCATACAACG 58.470 34.615 0.00 0.00 0.00 4.10
3195 3276 9.358872 GGAAAACTCAGAATCAAATTTCCATAC 57.641 33.333 8.96 0.00 42.33 2.39
3249 3330 9.973450 TTATTAAGTTTGCAACATAAGCTTCAA 57.027 25.926 0.00 0.00 32.16 2.69
3474 3558 7.341769 TGATCAAATTCCCGTTTCTCCATTTAT 59.658 33.333 0.00 0.00 0.00 1.40
3493 3579 7.067372 ACAACAATGAACTCACTTCTGATCAAA 59.933 33.333 0.00 0.00 0.00 2.69
3494 3580 6.543465 ACAACAATGAACTCACTTCTGATCAA 59.457 34.615 0.00 0.00 0.00 2.57
3496 3582 6.551385 ACAACAATGAACTCACTTCTGATC 57.449 37.500 0.00 0.00 0.00 2.92
3497 3583 6.319658 ACAACAACAATGAACTCACTTCTGAT 59.680 34.615 0.00 0.00 0.00 2.90
3498 3584 5.647658 ACAACAACAATGAACTCACTTCTGA 59.352 36.000 0.00 0.00 0.00 3.27
3499 3585 5.883661 ACAACAACAATGAACTCACTTCTG 58.116 37.500 0.00 0.00 0.00 3.02
3500 3586 7.807977 ATACAACAACAATGAACTCACTTCT 57.192 32.000 0.00 0.00 0.00 2.85
3501 3587 7.746475 GCTATACAACAACAATGAACTCACTTC 59.254 37.037 0.00 0.00 0.00 3.01
3502 3588 7.571244 CGCTATACAACAACAATGAACTCACTT 60.571 37.037 0.00 0.00 0.00 3.16
3503 3589 6.128553 CGCTATACAACAACAATGAACTCACT 60.129 38.462 0.00 0.00 0.00 3.41
3504 3590 6.015504 CGCTATACAACAACAATGAACTCAC 58.984 40.000 0.00 0.00 0.00 3.51
3505 3591 5.929415 TCGCTATACAACAACAATGAACTCA 59.071 36.000 0.00 0.00 0.00 3.41
3506 3592 6.403333 TCGCTATACAACAACAATGAACTC 57.597 37.500 0.00 0.00 0.00 3.01
3507 3593 6.795098 TTCGCTATACAACAACAATGAACT 57.205 33.333 0.00 0.00 0.00 3.01
3508 3594 6.304683 GGTTTCGCTATACAACAACAATGAAC 59.695 38.462 0.00 0.00 0.00 3.18
3509 3595 6.205853 AGGTTTCGCTATACAACAACAATGAA 59.794 34.615 0.00 0.00 0.00 2.57
3510 3596 5.703592 AGGTTTCGCTATACAACAACAATGA 59.296 36.000 0.00 0.00 0.00 2.57
3511 3597 5.938322 AGGTTTCGCTATACAACAACAATG 58.062 37.500 0.00 0.00 0.00 2.82
3512 3598 6.569179 AAGGTTTCGCTATACAACAACAAT 57.431 33.333 0.00 0.00 0.00 2.71
3513 3599 6.380095 AAAGGTTTCGCTATACAACAACAA 57.620 33.333 0.00 0.00 0.00 2.83
3514 3600 5.049267 GGAAAGGTTTCGCTATACAACAACA 60.049 40.000 0.00 0.00 38.06 3.33
3515 3601 5.180680 AGGAAAGGTTTCGCTATACAACAAC 59.819 40.000 0.00 0.00 38.06 3.32
3516 3602 5.310451 AGGAAAGGTTTCGCTATACAACAA 58.690 37.500 0.00 0.00 38.06 2.83
3517 3603 4.901868 AGGAAAGGTTTCGCTATACAACA 58.098 39.130 0.00 0.00 38.06 3.33
3518 3604 5.410439 TCAAGGAAAGGTTTCGCTATACAAC 59.590 40.000 0.00 0.00 38.06 3.32
3519 3605 5.410439 GTCAAGGAAAGGTTTCGCTATACAA 59.590 40.000 0.00 0.00 38.06 2.41
3520 3606 4.933400 GTCAAGGAAAGGTTTCGCTATACA 59.067 41.667 0.00 0.00 38.06 2.29
3521 3607 4.933400 TGTCAAGGAAAGGTTTCGCTATAC 59.067 41.667 0.00 0.17 38.06 1.47
3522 3608 5.155278 TGTCAAGGAAAGGTTTCGCTATA 57.845 39.130 0.00 0.00 38.06 1.31
3523 3609 4.015872 TGTCAAGGAAAGGTTTCGCTAT 57.984 40.909 0.00 0.00 38.06 2.97
3524 3610 3.478857 TGTCAAGGAAAGGTTTCGCTA 57.521 42.857 0.00 0.00 38.06 4.26
3525 3611 2.341846 TGTCAAGGAAAGGTTTCGCT 57.658 45.000 0.00 0.00 38.06 4.93
3526 3612 3.430333 TTTGTCAAGGAAAGGTTTCGC 57.570 42.857 0.00 0.00 38.06 4.70
3527 3613 4.109766 GGTTTTGTCAAGGAAAGGTTTCG 58.890 43.478 0.00 0.00 38.06 3.46
3528 3614 5.079689 TGGTTTTGTCAAGGAAAGGTTTC 57.920 39.130 0.00 0.00 36.46 2.78
3529 3615 5.692115 ATGGTTTTGTCAAGGAAAGGTTT 57.308 34.783 0.00 0.00 0.00 3.27
3530 3616 5.425217 AGAATGGTTTTGTCAAGGAAAGGTT 59.575 36.000 0.00 0.00 0.00 3.50
3531 3617 4.962362 AGAATGGTTTTGTCAAGGAAAGGT 59.038 37.500 0.00 0.00 0.00 3.50
3532 3618 5.068987 TGAGAATGGTTTTGTCAAGGAAAGG 59.931 40.000 0.00 0.00 0.00 3.11
3533 3619 6.147864 TGAGAATGGTTTTGTCAAGGAAAG 57.852 37.500 0.00 0.00 0.00 2.62
3534 3620 5.451798 GCTGAGAATGGTTTTGTCAAGGAAA 60.452 40.000 0.00 0.00 0.00 3.13
3535 3621 4.037923 GCTGAGAATGGTTTTGTCAAGGAA 59.962 41.667 0.00 0.00 0.00 3.36
3536 3622 3.569701 GCTGAGAATGGTTTTGTCAAGGA 59.430 43.478 0.00 0.00 0.00 3.36
3537 3623 3.571401 AGCTGAGAATGGTTTTGTCAAGG 59.429 43.478 0.00 0.00 0.00 3.61
3538 3624 4.843220 AGCTGAGAATGGTTTTGTCAAG 57.157 40.909 0.00 0.00 0.00 3.02
3539 3625 6.899393 ATTAGCTGAGAATGGTTTTGTCAA 57.101 33.333 0.00 0.00 0.00 3.18
3540 3626 7.394016 TCTATTAGCTGAGAATGGTTTTGTCA 58.606 34.615 0.00 0.00 0.00 3.58
3541 3627 7.849804 TCTATTAGCTGAGAATGGTTTTGTC 57.150 36.000 0.00 0.00 0.00 3.18
3542 3628 7.148171 GCTTCTATTAGCTGAGAATGGTTTTGT 60.148 37.037 0.00 0.00 38.15 2.83
3543 3629 7.192232 GCTTCTATTAGCTGAGAATGGTTTTG 58.808 38.462 0.00 0.00 38.15 2.44
3544 3630 6.319911 GGCTTCTATTAGCTGAGAATGGTTTT 59.680 38.462 0.00 0.00 40.99 2.43
3545 3631 5.825151 GGCTTCTATTAGCTGAGAATGGTTT 59.175 40.000 0.00 0.00 40.99 3.27
3546 3632 5.372373 GGCTTCTATTAGCTGAGAATGGTT 58.628 41.667 0.00 0.00 40.99 3.67
3547 3633 4.967036 GGCTTCTATTAGCTGAGAATGGT 58.033 43.478 0.00 0.00 40.99 3.55
3555 3641 2.810439 AGCTCGGCTTCTATTAGCTG 57.190 50.000 0.00 0.00 46.66 4.24
3556 3642 4.340617 AGATAGCTCGGCTTCTATTAGCT 58.659 43.478 3.71 0.00 45.14 3.32
3557 3643 4.712122 AGATAGCTCGGCTTCTATTAGC 57.288 45.455 3.71 0.00 40.44 3.09
3558 3644 6.544197 TGGATAGATAGCTCGGCTTCTATTAG 59.456 42.308 19.05 0.00 38.16 1.73
3559 3645 6.424032 TGGATAGATAGCTCGGCTTCTATTA 58.576 40.000 19.05 13.79 38.16 0.98
3560 3646 5.265191 TGGATAGATAGCTCGGCTTCTATT 58.735 41.667 19.05 11.11 38.16 1.73
3561 3647 4.861196 TGGATAGATAGCTCGGCTTCTAT 58.139 43.478 18.61 18.61 39.34 1.98
3562 3648 4.019231 TCTGGATAGATAGCTCGGCTTCTA 60.019 45.833 3.71 10.39 40.44 2.10
3563 3649 3.088532 CTGGATAGATAGCTCGGCTTCT 58.911 50.000 3.71 8.90 40.44 2.85
3564 3650 3.085533 TCTGGATAGATAGCTCGGCTTC 58.914 50.000 3.71 2.87 40.44 3.86
3565 3651 3.162147 TCTGGATAGATAGCTCGGCTT 57.838 47.619 3.71 0.00 40.44 4.35
3566 3652 2.889170 TCTGGATAGATAGCTCGGCT 57.111 50.000 0.00 3.87 43.41 5.52
3567 3653 3.020274 TGATCTGGATAGATAGCTCGGC 58.980 50.000 0.00 0.00 43.63 5.54
3568 3654 3.631686 CCTGATCTGGATAGATAGCTCGG 59.368 52.174 13.18 0.00 43.63 4.63
3569 3655 3.631686 CCCTGATCTGGATAGATAGCTCG 59.368 52.174 19.59 0.00 43.63 5.03
3570 3656 4.609301 ACCCTGATCTGGATAGATAGCTC 58.391 47.826 19.59 0.00 43.63 4.09
3571 3657 4.690767 ACCCTGATCTGGATAGATAGCT 57.309 45.455 19.59 0.00 43.63 3.32
3572 3658 4.774726 TCAACCCTGATCTGGATAGATAGC 59.225 45.833 19.59 0.00 43.63 2.97
3573 3659 6.571344 CGTTCAACCCTGATCTGGATAGATAG 60.571 46.154 19.59 4.00 43.63 2.08
3574 3660 5.243954 CGTTCAACCCTGATCTGGATAGATA 59.756 44.000 19.59 0.00 43.63 1.98
3575 3661 4.039730 CGTTCAACCCTGATCTGGATAGAT 59.960 45.833 19.59 0.00 46.22 1.98
3576 3662 3.384789 CGTTCAACCCTGATCTGGATAGA 59.615 47.826 19.59 10.63 37.35 1.98
3577 3663 3.384789 TCGTTCAACCCTGATCTGGATAG 59.615 47.826 19.59 8.63 0.00 2.08
3578 3664 3.371034 TCGTTCAACCCTGATCTGGATA 58.629 45.455 19.59 0.00 0.00 2.59
3579 3665 2.187958 TCGTTCAACCCTGATCTGGAT 58.812 47.619 19.59 0.00 0.00 3.41
3580 3666 1.639722 TCGTTCAACCCTGATCTGGA 58.360 50.000 19.59 0.00 0.00 3.86
3581 3667 2.350522 CTTCGTTCAACCCTGATCTGG 58.649 52.381 11.58 11.58 0.00 3.86
3582 3668 1.734465 GCTTCGTTCAACCCTGATCTG 59.266 52.381 0.00 0.00 0.00 2.90
3583 3669 1.673033 CGCTTCGTTCAACCCTGATCT 60.673 52.381 0.00 0.00 0.00 2.75
3584 3670 0.721718 CGCTTCGTTCAACCCTGATC 59.278 55.000 0.00 0.00 0.00 2.92
3585 3671 0.320374 TCGCTTCGTTCAACCCTGAT 59.680 50.000 0.00 0.00 0.00 2.90
3586 3672 0.105224 TTCGCTTCGTTCAACCCTGA 59.895 50.000 0.00 0.00 0.00 3.86
3587 3673 1.135972 CATTCGCTTCGTTCAACCCTG 60.136 52.381 0.00 0.00 0.00 4.45
3588 3674 1.156736 CATTCGCTTCGTTCAACCCT 58.843 50.000 0.00 0.00 0.00 4.34
3589 3675 0.168128 CCATTCGCTTCGTTCAACCC 59.832 55.000 0.00 0.00 0.00 4.11
3590 3676 1.153353 TCCATTCGCTTCGTTCAACC 58.847 50.000 0.00 0.00 0.00 3.77
3591 3677 2.961522 TTCCATTCGCTTCGTTCAAC 57.038 45.000 0.00 0.00 0.00 3.18
3592 3678 3.851838 GCTTTTCCATTCGCTTCGTTCAA 60.852 43.478 0.00 0.00 0.00 2.69
3593 3679 2.350388 GCTTTTCCATTCGCTTCGTTCA 60.350 45.455 0.00 0.00 0.00 3.18
3594 3680 2.242564 GCTTTTCCATTCGCTTCGTTC 58.757 47.619 0.00 0.00 0.00 3.95
3595 3681 1.068541 GGCTTTTCCATTCGCTTCGTT 60.069 47.619 0.00 0.00 34.01 3.85
3596 3682 0.521735 GGCTTTTCCATTCGCTTCGT 59.478 50.000 0.00 0.00 34.01 3.85
3597 3683 0.521291 TGGCTTTTCCATTCGCTTCG 59.479 50.000 0.00 0.00 40.72 3.79
3598 3684 2.723124 TTGGCTTTTCCATTCGCTTC 57.277 45.000 0.00 0.00 46.04 3.86
3599 3685 2.627699 TCTTTGGCTTTTCCATTCGCTT 59.372 40.909 0.00 0.00 46.04 4.68
3600 3686 2.238521 TCTTTGGCTTTTCCATTCGCT 58.761 42.857 0.00 0.00 46.04 4.93
3601 3687 2.723124 TCTTTGGCTTTTCCATTCGC 57.277 45.000 0.00 0.00 46.04 4.70
3602 3688 4.808364 TGTTTTCTTTGGCTTTTCCATTCG 59.192 37.500 0.00 0.00 46.04 3.34
3603 3689 6.866010 ATGTTTTCTTTGGCTTTTCCATTC 57.134 33.333 0.00 0.00 46.04 2.67
3604 3690 8.744568 TTTATGTTTTCTTTGGCTTTTCCATT 57.255 26.923 0.00 0.00 46.04 3.16
3605 3691 8.922931 ATTTATGTTTTCTTTGGCTTTTCCAT 57.077 26.923 0.00 0.00 46.04 3.41
3606 3692 7.443879 GGATTTATGTTTTCTTTGGCTTTTCCA 59.556 33.333 0.00 0.00 44.85 3.53
3607 3693 7.443879 TGGATTTATGTTTTCTTTGGCTTTTCC 59.556 33.333 0.00 0.00 0.00 3.13
3608 3694 8.376889 TGGATTTATGTTTTCTTTGGCTTTTC 57.623 30.769 0.00 0.00 0.00 2.29
3609 3695 8.922931 ATGGATTTATGTTTTCTTTGGCTTTT 57.077 26.923 0.00 0.00 0.00 2.27
3610 3696 8.785946 CAATGGATTTATGTTTTCTTTGGCTTT 58.214 29.630 0.00 0.00 0.00 3.51
3611 3697 7.094677 GCAATGGATTTATGTTTTCTTTGGCTT 60.095 33.333 0.00 0.00 0.00 4.35
3612 3698 6.372381 GCAATGGATTTATGTTTTCTTTGGCT 59.628 34.615 0.00 0.00 0.00 4.75
3613 3699 6.545508 GCAATGGATTTATGTTTTCTTTGGC 58.454 36.000 0.00 0.00 0.00 4.52
3614 3700 6.589523 TCGCAATGGATTTATGTTTTCTTTGG 59.410 34.615 0.00 0.00 0.00 3.28
3615 3701 7.579589 TCGCAATGGATTTATGTTTTCTTTG 57.420 32.000 0.00 0.00 0.00 2.77
3616 3702 8.776376 AATCGCAATGGATTTATGTTTTCTTT 57.224 26.923 0.00 0.00 32.89 2.52
3617 3703 9.520204 CTAATCGCAATGGATTTATGTTTTCTT 57.480 29.630 3.10 0.00 37.74 2.52
3618 3704 8.902806 TCTAATCGCAATGGATTTATGTTTTCT 58.097 29.630 3.10 0.00 37.74 2.52
3619 3705 9.515020 TTCTAATCGCAATGGATTTATGTTTTC 57.485 29.630 3.10 0.00 37.74 2.29
3620 3706 9.868277 TTTCTAATCGCAATGGATTTATGTTTT 57.132 25.926 3.10 0.00 37.74 2.43
3621 3707 9.301153 GTTTCTAATCGCAATGGATTTATGTTT 57.699 29.630 3.10 0.00 37.74 2.83
3622 3708 7.920682 GGTTTCTAATCGCAATGGATTTATGTT 59.079 33.333 3.10 0.00 37.74 2.71
3623 3709 7.068103 TGGTTTCTAATCGCAATGGATTTATGT 59.932 33.333 3.10 0.00 37.74 2.29
3624 3710 7.424803 TGGTTTCTAATCGCAATGGATTTATG 58.575 34.615 3.10 0.00 37.74 1.90
3625 3711 7.285401 ACTGGTTTCTAATCGCAATGGATTTAT 59.715 33.333 3.10 0.00 37.74 1.40
3626 3712 6.601613 ACTGGTTTCTAATCGCAATGGATTTA 59.398 34.615 3.10 0.00 37.74 1.40
3627 3713 5.418840 ACTGGTTTCTAATCGCAATGGATTT 59.581 36.000 3.10 0.00 37.74 2.17
3628 3714 4.949856 ACTGGTTTCTAATCGCAATGGATT 59.050 37.500 3.27 3.27 39.78 3.01
3629 3715 4.336433 CACTGGTTTCTAATCGCAATGGAT 59.664 41.667 0.00 0.00 0.00 3.41
3630 3716 3.689161 CACTGGTTTCTAATCGCAATGGA 59.311 43.478 0.00 0.00 0.00 3.41
3631 3717 3.689161 TCACTGGTTTCTAATCGCAATGG 59.311 43.478 0.00 0.00 0.00 3.16
3632 3718 4.393062 AGTCACTGGTTTCTAATCGCAATG 59.607 41.667 0.00 0.00 0.00 2.82
3633 3719 4.579869 AGTCACTGGTTTCTAATCGCAAT 58.420 39.130 0.00 0.00 0.00 3.56
3634 3720 3.994392 GAGTCACTGGTTTCTAATCGCAA 59.006 43.478 0.00 0.00 0.00 4.85
3635 3721 3.258372 AGAGTCACTGGTTTCTAATCGCA 59.742 43.478 0.00 0.00 0.00 5.10
3636 3722 3.851098 AGAGTCACTGGTTTCTAATCGC 58.149 45.455 0.00 0.00 0.00 4.58
3637 3723 5.950883 TGTAGAGTCACTGGTTTCTAATCG 58.049 41.667 0.00 0.00 0.00 3.34
3638 3724 5.808030 GCTGTAGAGTCACTGGTTTCTAATC 59.192 44.000 0.00 0.00 0.00 1.75
3639 3725 5.337652 GGCTGTAGAGTCACTGGTTTCTAAT 60.338 44.000 0.00 0.00 0.00 1.73
3640 3726 4.021368 GGCTGTAGAGTCACTGGTTTCTAA 60.021 45.833 0.00 0.00 0.00 2.10
3641 3727 3.510360 GGCTGTAGAGTCACTGGTTTCTA 59.490 47.826 0.00 0.00 0.00 2.10
3642 3728 2.300437 GGCTGTAGAGTCACTGGTTTCT 59.700 50.000 0.00 0.00 0.00 2.52
3643 3729 2.037251 TGGCTGTAGAGTCACTGGTTTC 59.963 50.000 0.00 0.00 0.00 2.78
3644 3730 2.037772 CTGGCTGTAGAGTCACTGGTTT 59.962 50.000 0.00 0.00 28.28 3.27
3645 3731 1.620819 CTGGCTGTAGAGTCACTGGTT 59.379 52.381 0.00 0.00 28.28 3.67
3646 3732 1.261480 CTGGCTGTAGAGTCACTGGT 58.739 55.000 0.00 0.00 28.28 4.00
3647 3733 0.534412 CCTGGCTGTAGAGTCACTGG 59.466 60.000 0.00 0.00 28.28 4.00
3648 3734 0.534412 CCCTGGCTGTAGAGTCACTG 59.466 60.000 0.00 0.00 28.28 3.66
3649 3735 1.261238 GCCCTGGCTGTAGAGTCACT 61.261 60.000 0.00 0.00 38.26 3.41
3650 3736 1.219393 GCCCTGGCTGTAGAGTCAC 59.781 63.158 0.00 0.00 38.26 3.67
3651 3737 3.713650 GCCCTGGCTGTAGAGTCA 58.286 61.111 0.00 0.00 38.26 3.41
3670 3756 5.461526 TCTTTCTATCTTACATCGCCATCG 58.538 41.667 0.00 0.00 0.00 3.84
3671 3757 7.148507 CCATTCTTTCTATCTTACATCGCCATC 60.149 40.741 0.00 0.00 0.00 3.51
3672 3758 6.652481 CCATTCTTTCTATCTTACATCGCCAT 59.348 38.462 0.00 0.00 0.00 4.40
3673 3759 5.991606 CCATTCTTTCTATCTTACATCGCCA 59.008 40.000 0.00 0.00 0.00 5.69
3674 3760 5.409826 CCCATTCTTTCTATCTTACATCGCC 59.590 44.000 0.00 0.00 0.00 5.54
3675 3761 5.409826 CCCCATTCTTTCTATCTTACATCGC 59.590 44.000 0.00 0.00 0.00 4.58
3676 3762 6.759272 TCCCCATTCTTTCTATCTTACATCG 58.241 40.000 0.00 0.00 0.00 3.84
3677 3763 7.740805 ACTCCCCATTCTTTCTATCTTACATC 58.259 38.462 0.00 0.00 0.00 3.06
3678 3764 7.698163 ACTCCCCATTCTTTCTATCTTACAT 57.302 36.000 0.00 0.00 0.00 2.29
3679 3765 7.510675 AACTCCCCATTCTTTCTATCTTACA 57.489 36.000 0.00 0.00 0.00 2.41
3680 3766 8.151596 CCTAACTCCCCATTCTTTCTATCTTAC 58.848 40.741 0.00 0.00 0.00 2.34
3681 3767 7.292591 CCCTAACTCCCCATTCTTTCTATCTTA 59.707 40.741 0.00 0.00 0.00 2.10
3682 3768 6.101881 CCCTAACTCCCCATTCTTTCTATCTT 59.898 42.308 0.00 0.00 0.00 2.40
3683 3769 5.608860 CCCTAACTCCCCATTCTTTCTATCT 59.391 44.000 0.00 0.00 0.00 1.98
3684 3770 5.746361 GCCCTAACTCCCCATTCTTTCTATC 60.746 48.000 0.00 0.00 0.00 2.08
3685 3771 4.104897 GCCCTAACTCCCCATTCTTTCTAT 59.895 45.833 0.00 0.00 0.00 1.98
3686 3772 3.458487 GCCCTAACTCCCCATTCTTTCTA 59.542 47.826 0.00 0.00 0.00 2.10
3687 3773 2.242452 GCCCTAACTCCCCATTCTTTCT 59.758 50.000 0.00 0.00 0.00 2.52
3688 3774 2.242452 AGCCCTAACTCCCCATTCTTTC 59.758 50.000 0.00 0.00 0.00 2.62
3689 3775 2.288525 AGCCCTAACTCCCCATTCTTT 58.711 47.619 0.00 0.00 0.00 2.52
3690 3776 1.987080 AGCCCTAACTCCCCATTCTT 58.013 50.000 0.00 0.00 0.00 2.52
3691 3777 1.847088 GAAGCCCTAACTCCCCATTCT 59.153 52.381 0.00 0.00 0.00 2.40
3692 3778 1.475213 CGAAGCCCTAACTCCCCATTC 60.475 57.143 0.00 0.00 0.00 2.67
3693 3779 0.546598 CGAAGCCCTAACTCCCCATT 59.453 55.000 0.00 0.00 0.00 3.16
3694 3780 1.345715 CCGAAGCCCTAACTCCCCAT 61.346 60.000 0.00 0.00 0.00 4.00
3695 3781 1.993391 CCGAAGCCCTAACTCCCCA 60.993 63.158 0.00 0.00 0.00 4.96
3696 3782 1.559965 AACCGAAGCCCTAACTCCCC 61.560 60.000 0.00 0.00 0.00 4.81
3697 3783 0.327259 AAACCGAAGCCCTAACTCCC 59.673 55.000 0.00 0.00 0.00 4.30
3698 3784 1.678123 GGAAACCGAAGCCCTAACTCC 60.678 57.143 0.00 0.00 0.00 3.85
3699 3785 1.278413 AGGAAACCGAAGCCCTAACTC 59.722 52.381 0.00 0.00 0.00 3.01
3700 3786 1.278413 GAGGAAACCGAAGCCCTAACT 59.722 52.381 0.00 0.00 0.00 2.24
3701 3787 1.278413 AGAGGAAACCGAAGCCCTAAC 59.722 52.381 0.00 0.00 0.00 2.34
3702 3788 1.278127 CAGAGGAAACCGAAGCCCTAA 59.722 52.381 0.00 0.00 0.00 2.69
3703 3789 0.902531 CAGAGGAAACCGAAGCCCTA 59.097 55.000 0.00 0.00 0.00 3.53
3704 3790 1.128188 ACAGAGGAAACCGAAGCCCT 61.128 55.000 0.00 0.00 0.00 5.19
3705 3791 0.611714 TACAGAGGAAACCGAAGCCC 59.388 55.000 0.00 0.00 0.00 5.19
3706 3792 2.007547 GCTACAGAGGAAACCGAAGCC 61.008 57.143 0.00 0.00 0.00 4.35
3707 3793 1.360820 GCTACAGAGGAAACCGAAGC 58.639 55.000 0.00 0.00 0.00 3.86
3708 3794 1.275291 TGGCTACAGAGGAAACCGAAG 59.725 52.381 0.00 0.00 0.00 3.79
3709 3795 1.344065 TGGCTACAGAGGAAACCGAA 58.656 50.000 0.00 0.00 0.00 4.30
3710 3796 3.060828 TGGCTACAGAGGAAACCGA 57.939 52.632 0.00 0.00 0.00 4.69
3721 3807 5.538053 TGATTTGGAATTGAAACTGGCTACA 59.462 36.000 0.00 0.00 0.00 2.74
3722 3808 6.024552 TGATTTGGAATTGAAACTGGCTAC 57.975 37.500 0.00 0.00 0.00 3.58
3723 3809 6.855763 ATGATTTGGAATTGAAACTGGCTA 57.144 33.333 0.00 0.00 0.00 3.93
3724 3810 5.750352 ATGATTTGGAATTGAAACTGGCT 57.250 34.783 0.00 0.00 0.00 4.75
3725 3811 6.604930 CAAATGATTTGGAATTGAAACTGGC 58.395 36.000 9.98 0.00 37.01 4.85
3726 3812 6.348704 GGCAAATGATTTGGAATTGAAACTGG 60.349 38.462 18.52 0.00 40.94 4.00
3727 3813 6.604930 GGCAAATGATTTGGAATTGAAACTG 58.395 36.000 18.52 0.00 40.94 3.16
3728 3814 5.409214 CGGCAAATGATTTGGAATTGAAACT 59.591 36.000 18.52 0.00 40.94 2.66
3729 3815 5.407995 TCGGCAAATGATTTGGAATTGAAAC 59.592 36.000 18.52 0.00 40.94 2.78
3730 3816 5.407995 GTCGGCAAATGATTTGGAATTGAAA 59.592 36.000 18.52 0.00 40.94 2.69
3731 3817 4.928615 GTCGGCAAATGATTTGGAATTGAA 59.071 37.500 18.52 0.00 40.94 2.69
3732 3818 4.021632 TGTCGGCAAATGATTTGGAATTGA 60.022 37.500 18.52 0.00 40.94 2.57
3733 3819 4.244066 TGTCGGCAAATGATTTGGAATTG 58.756 39.130 18.52 0.00 40.94 2.32
3734 3820 4.533919 TGTCGGCAAATGATTTGGAATT 57.466 36.364 18.52 0.00 40.94 2.17
3735 3821 4.435425 CATGTCGGCAAATGATTTGGAAT 58.565 39.130 18.52 4.00 40.94 3.01
3736 3822 3.847542 CATGTCGGCAAATGATTTGGAA 58.152 40.909 18.52 2.17 40.94 3.53
3737 3823 2.417107 GCATGTCGGCAAATGATTTGGA 60.417 45.455 18.52 6.42 40.94 3.53
3738 3824 1.928503 GCATGTCGGCAAATGATTTGG 59.071 47.619 18.52 4.19 40.94 3.28
3739 3825 1.584761 CGCATGTCGGCAAATGATTTG 59.415 47.619 13.32 13.32 43.44 2.32
3740 3826 1.912001 CGCATGTCGGCAAATGATTT 58.088 45.000 0.00 0.00 33.78 2.17
3741 3827 3.628005 CGCATGTCGGCAAATGATT 57.372 47.368 0.00 0.00 33.78 2.57
3751 3837 2.464459 GGAAGGAAGCCGCATGTCG 61.464 63.158 0.00 0.00 38.08 4.35
3752 3838 2.115291 GGGAAGGAAGCCGCATGTC 61.115 63.158 0.00 0.00 0.00 3.06
3753 3839 2.044946 GGGAAGGAAGCCGCATGT 60.045 61.111 0.00 0.00 0.00 3.21
3754 3840 1.821332 GAGGGAAGGAAGCCGCATG 60.821 63.158 0.00 0.00 0.00 4.06
3755 3841 2.592308 GAGGGAAGGAAGCCGCAT 59.408 61.111 0.00 0.00 0.00 4.73
3756 3842 3.717294 GGAGGGAAGGAAGCCGCA 61.717 66.667 0.00 0.00 0.00 5.69
3757 3843 3.393149 GAGGAGGGAAGGAAGCCGC 62.393 68.421 0.00 0.00 0.00 6.53
3758 3844 2.904131 GAGGAGGGAAGGAAGCCG 59.096 66.667 0.00 0.00 0.00 5.52
3759 3845 1.265454 TTCGAGGAGGGAAGGAAGCC 61.265 60.000 0.00 0.00 0.00 4.35
3760 3846 0.176910 CTTCGAGGAGGGAAGGAAGC 59.823 60.000 0.00 0.00 37.76 3.86
3761 3847 0.176910 GCTTCGAGGAGGGAAGGAAG 59.823 60.000 0.00 0.00 40.92 3.46
3762 3848 0.544357 TGCTTCGAGGAGGGAAGGAA 60.544 55.000 0.00 0.00 38.64 3.36
3763 3849 0.972983 CTGCTTCGAGGAGGGAAGGA 60.973 60.000 0.00 0.21 40.92 3.36
3764 3850 1.519719 CTGCTTCGAGGAGGGAAGG 59.480 63.158 0.00 0.00 40.92 3.46
3770 3856 1.080995 CGAAAGCCTGCTTCGAGGAG 61.081 60.000 4.63 0.00 34.69 3.69
3771 3857 1.079819 CGAAAGCCTGCTTCGAGGA 60.080 57.895 4.63 0.00 34.69 3.71
3772 3858 3.479370 CGAAAGCCTGCTTCGAGG 58.521 61.111 4.63 0.00 34.84 4.63
3784 3870 6.730960 TTTATATATAAAGCGGGGCGAAAG 57.269 37.500 12.90 0.00 0.00 2.62
3785 3871 6.730960 CTTTATATATAAAGCGGGGCGAAA 57.269 37.500 25.10 1.66 41.69 3.46
3796 3882 9.542462 GCATACGAGGGATGCTTTATATATAAA 57.458 33.333 15.47 15.47 45.14 1.40
3797 3883 7.865889 CGCATACGAGGGATGCTTTATATATAA 59.134 37.037 10.78 0.81 46.16 0.98
3798 3884 7.013942 ACGCATACGAGGGATGCTTTATATATA 59.986 37.037 10.78 0.00 46.16 0.86
3799 3885 6.183360 ACGCATACGAGGGATGCTTTATATAT 60.183 38.462 10.78 0.00 46.16 0.86
3800 3886 5.126545 ACGCATACGAGGGATGCTTTATATA 59.873 40.000 10.78 0.00 46.16 0.86
3801 3887 4.081642 ACGCATACGAGGGATGCTTTATAT 60.082 41.667 10.78 0.00 46.16 0.86
3802 3888 3.257375 ACGCATACGAGGGATGCTTTATA 59.743 43.478 10.78 0.00 46.16 0.98
3803 3889 2.037251 ACGCATACGAGGGATGCTTTAT 59.963 45.455 10.78 0.00 46.16 1.40
3804 3890 1.411246 ACGCATACGAGGGATGCTTTA 59.589 47.619 10.78 0.00 46.16 1.85
3805 3891 0.178068 ACGCATACGAGGGATGCTTT 59.822 50.000 10.78 0.00 46.16 3.51
3806 3892 1.037493 TACGCATACGAGGGATGCTT 58.963 50.000 10.78 4.32 46.16 3.91
3807 3893 0.314302 GTACGCATACGAGGGATGCT 59.686 55.000 10.78 1.61 46.16 3.79
3808 3894 0.666577 GGTACGCATACGAGGGATGC 60.667 60.000 2.67 2.67 45.12 3.91
3809 3895 0.959553 AGGTACGCATACGAGGGATG 59.040 55.000 0.00 0.00 43.93 3.51
3810 3896 1.700955 AAGGTACGCATACGAGGGAT 58.299 50.000 0.00 0.00 43.93 3.85
3911 3997 9.573166 TTATTTGAGTGATAAGACATAATGGGG 57.427 33.333 0.00 0.00 0.00 4.96
3937 4025 5.972107 AGAGATGCAACTACAAAAGCATT 57.028 34.783 0.00 0.00 46.71 3.56
4093 4181 6.787085 AAATAAGAATACCTAGTGCGCATC 57.213 37.500 15.91 7.72 0.00 3.91
4095 4183 5.526111 GGAAAATAAGAATACCTAGTGCGCA 59.474 40.000 5.66 5.66 0.00 6.09
4117 4205 4.202253 CCGAGTATCCTGACAATCAATGGA 60.202 45.833 0.00 0.00 0.00 3.41
4492 4610 5.176958 GCTTTCGACAAACTTCAGCTTACTA 59.823 40.000 0.00 0.00 0.00 1.82
4764 4888 8.842358 TCTGACGTATTAAGAGTTTGGAAAAT 57.158 30.769 0.00 0.00 0.00 1.82
4784 4908 2.029470 CACTGGTTCTCTCCACTCTGAC 60.029 54.545 0.00 0.00 33.55 3.51
4965 5089 7.042797 ACAATCTAACTGCAACAAACTCATT 57.957 32.000 0.00 0.00 0.00 2.57
5113 5239 5.010719 ACAGAACAGACGGTCTTGATAGAAA 59.989 40.000 8.18 0.00 30.65 2.52
5499 5625 5.234752 TGCAGACTTTGTAATCGTGTGTAT 58.765 37.500 0.00 0.00 0.00 2.29
5500 5626 4.623002 TGCAGACTTTGTAATCGTGTGTA 58.377 39.130 0.00 0.00 0.00 2.90
5529 5655 1.556911 ACCATCTGTACCTGAAGCCAG 59.443 52.381 0.00 0.00 40.09 4.85
5546 5672 0.178846 TCCTCTTCCCCAATGGACCA 60.179 55.000 0.00 0.00 45.11 4.02
5699 5866 6.384595 TGGTACCATGCTTTAGGATAACTGTA 59.615 38.462 11.60 0.00 0.00 2.74
5706 5873 5.279506 CGAGTATGGTACCATGCTTTAGGAT 60.280 44.000 36.51 19.47 46.53 3.24
5715 5882 2.292569 ACGCTACGAGTATGGTACCATG 59.707 50.000 33.41 20.56 37.82 3.66
5716 5883 2.579873 ACGCTACGAGTATGGTACCAT 58.420 47.619 29.68 29.68 40.19 3.55
5717 5884 2.042686 ACGCTACGAGTATGGTACCA 57.957 50.000 18.99 18.99 0.00 3.25
5729 5970 2.148569 CACGCAAAAAGAAAACGCTACG 59.851 45.455 0.00 0.00 0.00 3.51
5735 5976 4.634000 GTGTTTCCACGCAAAAAGAAAAC 58.366 39.130 0.00 0.00 33.19 2.43
5757 5998 5.937540 TCCAGGTTGATTAATACATATGCCG 59.062 40.000 1.58 0.00 0.00 5.69
5760 6001 8.712363 CGTCTTCCAGGTTGATTAATACATATG 58.288 37.037 0.00 0.00 0.00 1.78
5762 6003 7.788026 ACGTCTTCCAGGTTGATTAATACATA 58.212 34.615 0.00 0.00 0.00 2.29
5862 6103 2.990967 ATTGTGCCGGCCCAAGTG 60.991 61.111 27.93 0.00 0.00 3.16
5863 6104 2.990967 CATTGTGCCGGCCCAAGT 60.991 61.111 27.93 14.27 0.00 3.16
5864 6105 1.247419 TAACATTGTGCCGGCCCAAG 61.247 55.000 27.93 20.99 0.00 3.61
5865 6106 1.228583 TAACATTGTGCCGGCCCAA 60.229 52.632 26.62 26.62 0.00 4.12
5866 6107 1.677300 CTAACATTGTGCCGGCCCA 60.677 57.895 26.77 17.94 0.00 5.36
5867 6108 3.063743 GCTAACATTGTGCCGGCCC 62.064 63.158 26.77 14.61 0.00 5.80
5868 6109 1.872197 TTGCTAACATTGTGCCGGCC 61.872 55.000 26.77 16.24 0.00 6.13
5869 6110 0.732538 GTTGCTAACATTGTGCCGGC 60.733 55.000 22.73 22.73 0.00 6.13
5870 6111 0.454285 CGTTGCTAACATTGTGCCGG 60.454 55.000 0.00 0.00 0.00 6.13
5871 6112 0.454285 CCGTTGCTAACATTGTGCCG 60.454 55.000 0.00 0.00 0.00 5.69
5872 6113 0.878416 TCCGTTGCTAACATTGTGCC 59.122 50.000 0.00 0.00 0.00 5.01
5873 6114 2.584791 CTTCCGTTGCTAACATTGTGC 58.415 47.619 0.00 0.00 0.00 4.57
5874 6115 2.811431 TCCTTCCGTTGCTAACATTGTG 59.189 45.455 0.00 0.00 0.00 3.33
5875 6116 2.812011 GTCCTTCCGTTGCTAACATTGT 59.188 45.455 0.00 0.00 0.00 2.71
5876 6117 2.161609 GGTCCTTCCGTTGCTAACATTG 59.838 50.000 0.00 0.00 0.00 2.82
5877 6118 2.039879 AGGTCCTTCCGTTGCTAACATT 59.960 45.455 0.00 0.00 41.99 2.71
5878 6119 1.628846 AGGTCCTTCCGTTGCTAACAT 59.371 47.619 0.00 0.00 41.99 2.71
5879 6120 1.001633 GAGGTCCTTCCGTTGCTAACA 59.998 52.381 0.00 0.00 41.99 2.41
5880 6121 1.675116 GGAGGTCCTTCCGTTGCTAAC 60.675 57.143 0.00 0.00 41.99 2.34
5881 6122 0.611714 GGAGGTCCTTCCGTTGCTAA 59.388 55.000 0.00 0.00 41.99 3.09
5882 6123 0.252103 AGGAGGTCCTTCCGTTGCTA 60.252 55.000 0.00 0.00 46.09 3.49
5883 6124 1.536662 AGGAGGTCCTTCCGTTGCT 60.537 57.895 0.00 0.00 46.09 3.91
5884 6125 3.069778 AGGAGGTCCTTCCGTTGC 58.930 61.111 0.00 0.00 46.09 4.17
5897 6138 0.174617 GGAGTTCTCGCCTCAAGGAG 59.825 60.000 0.00 0.00 37.39 3.69
5898 6139 0.251832 AGGAGTTCTCGCCTCAAGGA 60.252 55.000 0.00 0.00 39.64 3.36
5899 6140 0.610687 AAGGAGTTCTCGCCTCAAGG 59.389 55.000 0.00 0.00 42.86 3.61
5934 6175 1.173444 AGGGAGGCAGCTACGTATCG 61.173 60.000 0.00 0.00 0.00 2.92
5940 6181 3.004944 GCGATATATAGGGAGGCAGCTAC 59.995 52.174 0.00 0.00 0.00 3.58
6045 6286 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6046 6287 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6047 6288 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6048 6289 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6049 6290 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6050 6291 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6051 6292 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
6052 6293 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
6053 6294 4.501229 GCAGAGAGAGAGAGAGAGAGAGAG 60.501 54.167 0.00 0.00 0.00 3.20
6054 6295 3.386078 GCAGAGAGAGAGAGAGAGAGAGA 59.614 52.174 0.00 0.00 0.00 3.10
6055 6296 3.387374 AGCAGAGAGAGAGAGAGAGAGAG 59.613 52.174 0.00 0.00 0.00 3.20
6056 6297 3.133542 CAGCAGAGAGAGAGAGAGAGAGA 59.866 52.174 0.00 0.00 0.00 3.10
6057 6298 3.118482 ACAGCAGAGAGAGAGAGAGAGAG 60.118 52.174 0.00 0.00 0.00 3.20
6058 6299 2.840038 ACAGCAGAGAGAGAGAGAGAGA 59.160 50.000 0.00 0.00 0.00 3.10
6059 6300 3.118482 AGACAGCAGAGAGAGAGAGAGAG 60.118 52.174 0.00 0.00 0.00 3.20
6060 6301 2.840038 AGACAGCAGAGAGAGAGAGAGA 59.160 50.000 0.00 0.00 0.00 3.10
6061 6302 3.272574 AGACAGCAGAGAGAGAGAGAG 57.727 52.381 0.00 0.00 0.00 3.20
6062 6303 3.719268 AAGACAGCAGAGAGAGAGAGA 57.281 47.619 0.00 0.00 0.00 3.10
6063 6304 4.012374 AGAAAGACAGCAGAGAGAGAGAG 58.988 47.826 0.00 0.00 0.00 3.20
6194 6440 9.296400 CGAAGAAAACAAAAGGAAACTGAAATA 57.704 29.630 0.00 0.00 42.68 1.40
6195 6441 7.817478 ACGAAGAAAACAAAAGGAAACTGAAAT 59.183 29.630 0.00 0.00 42.68 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.