Multiple sequence alignment - TraesCS4B01G123900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G123900 chr4B 100.000 9488 0 0 1 9488 147706779 147697292 0.000000e+00 17522.0
1 TraesCS4B01G123900 chr4B 91.111 180 10 5 7309 7486 27243824 27243649 1.230000e-58 239.0
2 TraesCS4B01G123900 chr4B 99.219 128 1 0 7624 7751 352135512 352135639 2.060000e-56 231.0
3 TraesCS4B01G123900 chr4B 88.268 179 18 3 7309 7486 636609258 636609434 2.680000e-50 211.0
4 TraesCS4B01G123900 chr4B 93.333 45 1 1 4584 4626 147702155 147702111 2.210000e-06 65.8
5 TraesCS4B01G123900 chr4B 93.333 45 1 1 4625 4669 147702196 147702154 2.210000e-06 65.8
6 TraesCS4B01G123900 chr4D 95.645 4638 121 26 2042 6638 103487438 103482841 0.000000e+00 7371.0
7 TraesCS4B01G123900 chr4D 97.709 1746 32 5 7749 9488 103481963 103480220 0.000000e+00 2996.0
8 TraesCS4B01G123900 chr4D 94.121 1820 83 11 73 1888 103492306 103490507 0.000000e+00 2747.0
9 TraesCS4B01G123900 chr4D 94.166 737 25 7 6577 7310 103482850 103482129 0.000000e+00 1107.0
10 TraesCS4B01G123900 chr4D 95.745 94 3 1 7533 7626 103482053 103481961 5.940000e-32 150.0
11 TraesCS4B01G123900 chr4D 96.825 63 1 1 7484 7546 103482129 103482068 4.690000e-18 104.0
12 TraesCS4B01G123900 chr4D 94.915 59 3 0 5930 5988 503812417 503812475 1.010000e-14 93.5
13 TraesCS4B01G123900 chr4D 93.023 43 1 1 4584 4626 103484850 103484810 2.860000e-05 62.1
14 TraesCS4B01G123900 chr4D 100.000 31 0 0 1997 2027 103490506 103490476 3.700000e-04 58.4
15 TraesCS4B01G123900 chr4A 94.080 1892 91 13 1 1888 471694876 471696750 0.000000e+00 2854.0
16 TraesCS4B01G123900 chr4A 95.782 1541 42 6 3129 4659 471697811 471699338 0.000000e+00 2464.0
17 TraesCS4B01G123900 chr4A 93.708 1621 72 12 5707 7310 471702116 471703723 0.000000e+00 2401.0
18 TraesCS4B01G123900 chr4A 96.889 1318 29 6 8181 9488 471711795 471713110 0.000000e+00 2196.0
19 TraesCS4B01G123900 chr4A 97.465 1065 24 2 1997 3060 471696751 471697813 0.000000e+00 1814.0
20 TraesCS4B01G123900 chr4A 97.588 622 13 1 4584 5205 471699304 471699923 0.000000e+00 1064.0
21 TraesCS4B01G123900 chr4A 97.118 451 10 2 7749 8199 471703891 471704338 0.000000e+00 758.0
22 TraesCS4B01G123900 chr4A 99.160 119 1 0 1886 2004 527909433 527909551 2.080000e-51 215.0
23 TraesCS4B01G123900 chr4A 97.872 94 2 0 7533 7626 471703800 471703893 7.620000e-36 163.0
24 TraesCS4B01G123900 chr4A 97.015 67 2 0 7481 7547 471703720 471703786 7.790000e-21 113.0
25 TraesCS4B01G123900 chr4A 97.674 43 1 0 4584 4626 471699345 471699387 3.670000e-09 75.0
26 TraesCS4B01G123900 chr4A 100.000 35 0 0 4625 4659 471699263 471699297 2.210000e-06 65.8
27 TraesCS4B01G123900 chr5A 87.755 294 33 2 2624 2917 320264383 320264673 3.280000e-89 340.0
28 TraesCS4B01G123900 chr5A 86.093 302 36 5 1030 1328 320263644 320263942 4.280000e-83 320.0
29 TraesCS4B01G123900 chr5A 88.119 202 24 0 3298 3499 320265172 320265373 3.420000e-59 241.0
30 TraesCS4B01G123900 chr5A 76.778 478 70 30 4726 5173 320266247 320266713 7.410000e-56 230.0
31 TraesCS4B01G123900 chr5A 76.261 337 59 13 7745 8065 320267425 320267756 9.860000e-35 159.0
32 TraesCS4B01G123900 chr5D 87.814 279 34 0 2642 2920 234059384 234059106 2.550000e-85 327.0
33 TraesCS4B01G123900 chr5D 85.811 296 36 5 1036 1328 234060131 234059839 9.250000e-80 309.0
34 TraesCS4B01G123900 chr5D 77.474 475 69 32 4728 5177 234057211 234056750 5.690000e-62 250.0
35 TraesCS4B01G123900 chr5D 88.776 196 22 0 3304 3499 234058296 234058101 3.420000e-59 241.0
36 TraesCS4B01G123900 chr5D 77.341 331 50 16 7754 8065 234055920 234055596 1.270000e-38 172.0
37 TraesCS4B01G123900 chr5D 95.385 65 1 2 5926 5988 521491105 521491041 1.690000e-17 102.0
38 TraesCS4B01G123900 chr5D 96.296 54 2 0 5929 5982 488168877 488168824 1.310000e-13 89.8
39 TraesCS4B01G123900 chr5B 86.424 302 35 5 1030 1328 270673810 270674108 9.190000e-85 326.0
40 TraesCS4B01G123900 chr5B 88.614 202 23 0 3298 3499 270675282 270675483 7.360000e-61 246.0
41 TraesCS4B01G123900 chr5B 83.333 204 22 6 4985 5177 270676641 270676843 2.720000e-40 178.0
42 TraesCS4B01G123900 chr5B 90.323 124 9 2 4726 4847 270676374 270676496 9.860000e-35 159.0
43 TraesCS4B01G123900 chr5B 85.294 136 18 2 7931 8065 270677760 270677894 1.280000e-28 139.0
44 TraesCS4B01G123900 chr5B 89.706 68 5 2 5924 5990 305049566 305049632 1.700000e-12 86.1
45 TraesCS4B01G123900 chr3D 99.237 131 1 0 7624 7754 283321124 283321254 4.430000e-58 237.0
46 TraesCS4B01G123900 chr3B 91.813 171 12 2 7307 7475 107966102 107966272 4.430000e-58 237.0
47 TraesCS4B01G123900 chr3B 95.714 140 6 0 7613 7752 383716479 383716618 9.590000e-55 226.0
48 TraesCS4B01G123900 chr3B 98.333 120 0 2 1886 2005 581706448 581706331 9.660000e-50 209.0
49 TraesCS4B01G123900 chr2D 92.398 171 5 3 7307 7477 590938004 590937842 4.430000e-58 237.0
50 TraesCS4B01G123900 chr2D 99.219 128 1 0 7624 7751 536091026 536091153 2.060000e-56 231.0
51 TraesCS4B01G123900 chr2D 99.219 128 1 0 7625 7752 561025622 561025749 2.060000e-56 231.0
52 TraesCS4B01G123900 chr2D 89.941 169 15 2 7310 7477 82141163 82141330 5.770000e-52 217.0
53 TraesCS4B01G123900 chr7D 98.473 131 2 0 7623 7753 154193125 154192995 2.060000e-56 231.0
54 TraesCS4B01G123900 chr7D 91.935 62 3 2 5926 5985 637885794 637885855 1.700000e-12 86.1
55 TraesCS4B01G123900 chr1D 99.219 128 1 0 7625 7752 255827756 255827883 2.060000e-56 231.0
56 TraesCS4B01G123900 chr1B 99.219 128 1 0 7624 7751 623732112 623731985 2.060000e-56 231.0
57 TraesCS4B01G123900 chr1B 100.000 112 0 0 1886 1997 80923682 80923793 3.470000e-49 207.0
58 TraesCS4B01G123900 chr1B 100.000 112 0 0 1886 1997 80955484 80955595 3.470000e-49 207.0
59 TraesCS4B01G123900 chr6B 95.714 140 6 0 7613 7752 15392233 15392094 9.590000e-55 226.0
60 TraesCS4B01G123900 chr6D 90.000 170 17 0 7308 7477 419484823 419484654 4.460000e-53 220.0
61 TraesCS4B01G123900 chr6D 89.017 173 15 3 7308 7477 388209929 388209758 2.680000e-50 211.0
62 TraesCS4B01G123900 chr1A 99.153 118 0 1 1886 2002 116593633 116593750 2.680000e-50 211.0
63 TraesCS4B01G123900 chr1A 96.094 128 3 2 1886 2013 263537290 263537165 3.470000e-49 207.0
64 TraesCS4B01G123900 chr1A 95.455 132 1 4 1886 2014 572526264 572526135 1.250000e-48 206.0
65 TraesCS4B01G123900 chr7B 88.571 175 16 4 7305 7477 656285486 656285658 9.660000e-50 209.0
66 TraesCS4B01G123900 chr7B 96.800 125 2 1 1886 2008 43955220 43955096 3.470000e-49 207.0
67 TraesCS4B01G123900 chr2B 88.506 174 17 2 7307 7477 85072405 85072232 3.470000e-49 207.0
68 TraesCS4B01G123900 chr2B 87.302 63 4 3 5928 5989 106315463 106315522 1.710000e-07 69.4
69 TraesCS4B01G123900 chr2A 97.521 121 3 0 1886 2006 447148679 447148799 3.470000e-49 207.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G123900 chr4B 147697292 147706779 9487 True 17522.000000 17522 100.000000 1 9488 1 chr4B.!!$R2 9487
1 TraesCS4B01G123900 chr4D 103480220 103487438 7218 True 1965.016667 7371 95.518833 2042 9488 6 chr4D.!!$R1 7446
2 TraesCS4B01G123900 chr4D 103490476 103492306 1830 True 1402.700000 2747 97.060500 73 2027 2 chr4D.!!$R2 1954
3 TraesCS4B01G123900 chr4A 471711795 471713110 1315 False 2196.000000 2196 96.889000 8181 9488 1 chr4A.!!$F1 1307
4 TraesCS4B01G123900 chr4A 471694876 471704338 9462 False 1177.180000 2854 96.830200 1 8199 10 chr4A.!!$F3 8198
5 TraesCS4B01G123900 chr5A 320263644 320267756 4112 False 258.000000 340 83.001200 1030 8065 5 chr5A.!!$F1 7035
6 TraesCS4B01G123900 chr5D 234055596 234060131 4535 True 259.800000 327 83.443200 1036 8065 5 chr5D.!!$R3 7029
7 TraesCS4B01G123900 chr5B 270673810 270677894 4084 False 209.600000 326 86.797600 1030 8065 5 chr5B.!!$F2 7035

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.107459 GAGGGGCTGGTCAACATCTC 60.107 60.000 0.00 0.00 0.00 2.75 F
283 284 0.171231 CTGGTCAACATCTCGAGCGA 59.829 55.000 7.81 0.00 32.30 4.93 F
556 557 0.179081 GATTAGTGGTCGGGCTGTCC 60.179 60.000 2.34 2.34 0.00 4.02 F
1920 1928 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67 F
1921 1929 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73 F
1947 1955 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46 F
1994 2002 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27 F
1995 2003 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94 F
3485 3933 1.405821 CGGCGGATAGTTCAGTTCTCT 59.594 52.381 0.00 0.00 0.00 3.10 F
4549 5277 2.487265 GCCTCCCACAAGAGAAACAGAA 60.487 50.000 0.00 0.00 35.82 3.02 F
5445 7121 0.107848 AGGCCCGTGCATGTAACTAC 60.108 55.000 0.00 0.00 40.13 2.73 F
5909 8723 0.106819 AATTGCCTGGGCTAGCAGAG 60.107 55.000 18.24 11.01 40.73 3.35 F
6791 9680 0.109532 TTGGAGGGCGTGACAATGAA 59.890 50.000 0.00 0.00 0.00 2.57 F
7637 10562 0.248565 GTTTGGTACTCCCTCCGTCC 59.751 60.000 0.00 0.00 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1901 1909 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74 R
1902 1910 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18 R
1928 1936 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28 R
3416 3864 3.164268 TGTCCCATTTCCAAATCCACTG 58.836 45.455 0.00 0.00 0.00 3.66 R
3708 4238 4.577283 GGCAAAACCTGTACAGTTTGACTA 59.423 41.667 29.28 0.00 36.30 2.59 R
3873 4405 5.813672 GTGGCATTTGTAATTGATGAAGCAT 59.186 36.000 0.00 0.00 0.00 3.79 R
3950 4660 8.674607 ACGGTAATTCAAGGATATTGAACTTTC 58.325 33.333 5.25 1.43 40.70 2.62 R
4073 4783 5.806654 AAGAGGGCAAGCAAGAAATTAAA 57.193 34.783 0.00 0.00 0.00 1.52 R
4659 5433 0.762418 TCCCGCAGAAAGAACTGGAA 59.238 50.000 0.00 0.00 38.22 3.53 R
5909 8723 0.114364 AAAATGTCACACCCTCCCCC 59.886 55.000 0.00 0.00 0.00 5.40 R
6770 9659 0.958091 CATTGTCACGCCCTCCAAAA 59.042 50.000 0.00 0.00 0.00 2.44 R
7734 10659 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12 R
7740 10665 0.179073 CTTGGCACATACTCCCTCCG 60.179 60.000 0.00 0.00 39.30 4.63 R
8652 11601 1.243342 TTCCGCACCCAATTCAGCAG 61.243 55.000 0.00 0.00 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.589492 CGGATGTCGCGATCCTTGC 61.589 63.158 22.72 9.87 40.02 4.01
67 68 2.189521 GGCGGTTGGATGGACGAT 59.810 61.111 0.00 0.00 0.00 3.73
98 99 4.778143 GGCGCGACAGGGGTGAAT 62.778 66.667 12.10 0.00 0.00 2.57
108 109 1.000396 GGGGTGAATGCTGCTCCTT 60.000 57.895 0.00 0.00 0.00 3.36
127 128 1.191489 TGAGGTTCACATCCGCTCCA 61.191 55.000 0.00 0.00 0.00 3.86
147 148 4.116328 CGACGCGCTTCCCTCTCA 62.116 66.667 5.73 0.00 0.00 3.27
198 199 4.314440 TTCTCCGGCTTGCACGCT 62.314 61.111 15.41 0.00 0.00 5.07
212 213 3.125573 CGCTGGAGTCGAGGACGA 61.126 66.667 4.18 0.00 46.56 4.20
229 230 1.227674 GAGATGCCCACGGATGACC 60.228 63.158 0.00 0.00 0.00 4.02
277 278 0.107459 GAGGGGCTGGTCAACATCTC 60.107 60.000 0.00 0.00 0.00 2.75
283 284 0.171231 CTGGTCAACATCTCGAGCGA 59.829 55.000 7.81 0.00 32.30 4.93
294 295 4.143333 CGAGCGACGGATTGGGGT 62.143 66.667 0.00 0.00 38.46 4.95
331 332 3.934391 GAGCAAGGGTGGACGACGG 62.934 68.421 0.00 0.00 0.00 4.79
350 351 2.728817 GATGACTAGGACGCGGGG 59.271 66.667 12.47 0.00 0.00 5.73
371 372 2.034999 GGGCGATGGGTTTGGTGA 59.965 61.111 0.00 0.00 0.00 4.02
383 384 2.611751 GGTTTGGTGAATTTGGTGCAAC 59.388 45.455 0.00 0.00 0.00 4.17
392 393 6.072175 GGTGAATTTGGTGCAACTTATAGTGA 60.072 38.462 2.04 0.00 36.74 3.41
399 400 4.081642 GGTGCAACTTATAGTGAGGTCAGA 60.082 45.833 0.00 0.00 36.74 3.27
400 401 5.395768 GGTGCAACTTATAGTGAGGTCAGAT 60.396 44.000 0.00 0.00 36.74 2.90
442 443 1.153449 CGCCCGAGCCTTGTCATAA 60.153 57.895 0.00 0.00 34.57 1.90
445 446 2.805295 CGCCCGAGCCTTGTCATAATTA 60.805 50.000 0.00 0.00 34.57 1.40
447 448 3.821033 GCCCGAGCCTTGTCATAATTATT 59.179 43.478 0.00 0.00 0.00 1.40
474 475 1.518367 TGGGTTGGATATGAGGGGTC 58.482 55.000 0.00 0.00 0.00 4.46
477 478 0.759346 GTTGGATATGAGGGGTCGCT 59.241 55.000 0.00 0.00 0.00 4.93
489 490 4.436998 GTCGCTGGTCAGTCCGGG 62.437 72.222 0.00 0.00 42.62 5.73
533 534 2.816689 CTTGTTTGGGTCGGGTTTTTC 58.183 47.619 0.00 0.00 0.00 2.29
536 537 1.477295 GTTTGGGTCGGGTTTTTCACA 59.523 47.619 0.00 0.00 0.00 3.58
538 539 0.547075 TGGGTCGGGTTTTTCACAGA 59.453 50.000 0.00 0.00 0.00 3.41
545 546 4.069304 TCGGGTTTTTCACAGATTAGTGG 58.931 43.478 0.00 0.00 39.93 4.00
546 547 3.818773 CGGGTTTTTCACAGATTAGTGGT 59.181 43.478 0.00 0.00 39.93 4.16
547 548 4.083484 CGGGTTTTTCACAGATTAGTGGTC 60.083 45.833 0.00 0.00 39.93 4.02
548 549 4.083484 GGGTTTTTCACAGATTAGTGGTCG 60.083 45.833 0.00 0.00 39.93 4.79
549 550 4.083484 GGTTTTTCACAGATTAGTGGTCGG 60.083 45.833 0.00 0.00 39.93 4.79
550 551 3.328382 TTTCACAGATTAGTGGTCGGG 57.672 47.619 0.00 0.00 39.93 5.14
551 552 0.535335 TCACAGATTAGTGGTCGGGC 59.465 55.000 0.00 0.00 39.93 6.13
552 553 0.537188 CACAGATTAGTGGTCGGGCT 59.463 55.000 0.00 0.00 35.88 5.19
553 554 0.537188 ACAGATTAGTGGTCGGGCTG 59.463 55.000 0.00 0.00 0.00 4.85
554 555 0.537188 CAGATTAGTGGTCGGGCTGT 59.463 55.000 0.00 0.00 0.00 4.40
555 556 0.824759 AGATTAGTGGTCGGGCTGTC 59.175 55.000 0.00 0.00 0.00 3.51
556 557 0.179081 GATTAGTGGTCGGGCTGTCC 60.179 60.000 2.34 2.34 0.00 4.02
605 606 3.119096 GGTTTGAGGCGGCGAGAC 61.119 66.667 12.98 0.00 0.00 3.36
946 947 3.865929 AAGCACACGCCTCTGACCG 62.866 63.158 0.00 0.00 39.83 4.79
998 999 1.067212 CCGCGAGTCTATTGCCTTACT 59.933 52.381 8.23 0.00 34.44 2.24
1365 1369 4.752604 TCGTAATTCTAGTGTTTGCTTGCA 59.247 37.500 0.00 0.00 0.00 4.08
1419 1423 4.686191 TCAGCCAACATTTTGTTCCAAT 57.314 36.364 0.00 0.00 38.77 3.16
1420 1424 4.378774 TCAGCCAACATTTTGTTCCAATG 58.621 39.130 0.00 0.00 38.77 2.82
1552 1556 2.622942 GGTTGTTGCTCATTGTCAGGAA 59.377 45.455 0.00 0.00 0.00 3.36
1604 1612 0.875059 GTGTTTGCTGAGGTGCTACC 59.125 55.000 0.00 0.00 38.99 3.18
1811 1819 8.343366 GGCTCTAAGTTATGGTTAACTAATTGC 58.657 37.037 5.42 3.31 45.77 3.56
1888 1896 5.407502 AGTTAAAGTGTGTTTTTGGTCAGC 58.592 37.500 0.00 0.00 0.00 4.26
1889 1897 2.959507 AAGTGTGTTTTTGGTCAGCC 57.040 45.000 0.00 0.00 0.00 4.85
1890 1898 2.143876 AGTGTGTTTTTGGTCAGCCT 57.856 45.000 0.00 0.00 35.27 4.58
1891 1899 2.024414 AGTGTGTTTTTGGTCAGCCTC 58.976 47.619 0.00 0.00 35.27 4.70
1892 1900 2.024414 GTGTGTTTTTGGTCAGCCTCT 58.976 47.619 0.00 0.00 35.27 3.69
1893 1901 2.427095 GTGTGTTTTTGGTCAGCCTCTT 59.573 45.455 0.00 0.00 35.27 2.85
1894 1902 3.630312 GTGTGTTTTTGGTCAGCCTCTTA 59.370 43.478 0.00 0.00 35.27 2.10
1895 1903 3.630312 TGTGTTTTTGGTCAGCCTCTTAC 59.370 43.478 0.00 0.00 35.27 2.34
1896 1904 3.630312 GTGTTTTTGGTCAGCCTCTTACA 59.370 43.478 0.00 0.00 35.27 2.41
1897 1905 3.882888 TGTTTTTGGTCAGCCTCTTACAG 59.117 43.478 0.00 0.00 35.27 2.74
1898 1906 4.134563 GTTTTTGGTCAGCCTCTTACAGA 58.865 43.478 0.00 0.00 35.27 3.41
1899 1907 4.431416 TTTTGGTCAGCCTCTTACAGAA 57.569 40.909 0.00 0.00 35.27 3.02
1900 1908 4.431416 TTTGGTCAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.27 2.52
1901 1909 4.640771 TTGGTCAGCCTCTTACAGAAAT 57.359 40.909 0.00 0.00 35.27 2.17
1902 1910 3.942829 TGGTCAGCCTCTTACAGAAATG 58.057 45.455 0.00 0.00 35.27 2.32
1903 1911 3.327757 TGGTCAGCCTCTTACAGAAATGT 59.672 43.478 0.00 0.00 35.27 2.71
1904 1912 4.530553 TGGTCAGCCTCTTACAGAAATGTA 59.469 41.667 0.00 0.00 35.27 2.29
1905 1913 5.112686 GGTCAGCCTCTTACAGAAATGTAG 58.887 45.833 0.00 0.00 0.00 2.74
1906 1914 5.112686 GTCAGCCTCTTACAGAAATGTAGG 58.887 45.833 0.00 0.00 0.00 3.18
1907 1915 4.162320 TCAGCCTCTTACAGAAATGTAGGG 59.838 45.833 0.00 0.66 0.00 3.53
1908 1916 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
1909 1917 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
1910 1918 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
1911 1919 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
1912 1920 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
1913 1921 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
1914 1922 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
1915 1923 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
1916 1924 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
1917 1925 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
1918 1926 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
1919 1927 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
1920 1928 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
1921 1929 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
1922 1930 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
1923 1931 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
1924 1932 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
1925 1933 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
1926 1934 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
1927 1935 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
1928 1936 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
1929 1937 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
1930 1938 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
1931 1939 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
1932 1940 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
1933 1941 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
1934 1942 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
1935 1943 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
1936 1944 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
1937 1945 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
1942 1950 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
1943 1951 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
1944 1952 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
1945 1953 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
1946 1954 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
1947 1955 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
1948 1956 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
1949 1957 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
1950 1958 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
1951 1959 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
1952 1960 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
1953 1961 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
1954 1962 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
1955 1963 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
1956 1964 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
1957 1965 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
1958 1966 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
1959 1967 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
1960 1968 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
1961 1969 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
1986 1994 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
1987 1995 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
1988 1996 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
1989 1997 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
1990 1998 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
1991 1999 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
1992 2000 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
1993 2001 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
1994 2002 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
1995 2003 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
2059 2067 4.987912 GCAGTAGATAGCTCTGGAAATGTC 59.012 45.833 0.00 0.00 32.66 3.06
2147 2155 4.687215 TGTGTGCTCTGCTCGGCC 62.687 66.667 0.00 0.00 0.00 6.13
2356 2364 5.106908 GCTTGAAGAAAGACGAGTTAAGCAT 60.107 40.000 0.00 0.00 38.24 3.79
2495 2503 3.273919 GTGTTGTCACAGCCAGATTTC 57.726 47.619 0.00 0.00 43.37 2.17
2510 2518 4.747108 CCAGATTTCGCCTCTAATGTAGTG 59.253 45.833 0.00 0.00 0.00 2.74
2515 2523 4.160642 TCGCCTCTAATGTAGTGTAGGA 57.839 45.455 0.00 0.00 0.00 2.94
2558 2567 1.532868 GCATTTCTTCTGTGTCGTGCT 59.467 47.619 0.00 0.00 0.00 4.40
2559 2568 2.031682 GCATTTCTTCTGTGTCGTGCTT 60.032 45.455 0.00 0.00 0.00 3.91
3077 3131 9.974980 TTCACCAGATTTTTATTACCTTGTTTC 57.025 29.630 0.00 0.00 0.00 2.78
3081 3135 7.968405 CCAGATTTTTATTACCTTGTTTCTCCG 59.032 37.037 0.00 0.00 0.00 4.63
3088 3157 2.550978 ACCTTGTTTCTCCGATATGCG 58.449 47.619 0.00 0.00 40.47 4.73
3416 3864 4.217118 GGGCATGGTCAGAATATTGATGAC 59.783 45.833 16.80 16.80 42.07 3.06
3434 3882 3.164268 TGACAGTGGATTTGGAAATGGG 58.836 45.455 0.00 0.00 0.00 4.00
3485 3933 1.405821 CGGCGGATAGTTCAGTTCTCT 59.594 52.381 0.00 0.00 0.00 3.10
3647 4177 5.581085 GTGGCTACACTTAAGGTATTCTGTG 59.419 44.000 7.53 0.00 44.29 3.66
3690 4220 6.214191 TGTATTGAGAGTGAGACTTCCATC 57.786 41.667 0.00 0.00 0.00 3.51
3873 4405 5.138276 AGAGGGAGTATTATTCGTGCAGTA 58.862 41.667 0.00 0.00 0.00 2.74
3929 4639 3.460103 GTTGACGGTTTGAGTGGTTCTA 58.540 45.455 0.00 0.00 0.00 2.10
4073 4783 5.072464 GGGATAGCAACTAGAAGGGAAAGAT 59.928 44.000 0.00 0.00 0.00 2.40
4164 4874 6.264292 TGTTTGCTTAAGAGTAATTCCAGCAA 59.736 34.615 6.67 0.00 39.89 3.91
4165 4875 7.039784 TGTTTGCTTAAGAGTAATTCCAGCAAT 60.040 33.333 6.67 0.00 40.61 3.56
4232 4951 5.407407 AGACAAGACTCGTAATTGGACAT 57.593 39.130 0.00 0.00 0.00 3.06
4285 5004 4.631377 GTCTGTCTACAACAAGCATATGCA 59.369 41.667 28.62 5.98 38.05 3.96
4286 5005 5.295292 GTCTGTCTACAACAAGCATATGCAT 59.705 40.000 28.62 15.43 38.05 3.96
4441 5169 8.691661 TTCCTTTTCTGTTGACTAAGCTTTAT 57.308 30.769 3.20 0.00 0.00 1.40
4497 5225 6.158598 AGTTTACATTGATGGTGCATTTGAC 58.841 36.000 0.00 0.00 0.00 3.18
4549 5277 2.487265 GCCTCCCACAAGAGAAACAGAA 60.487 50.000 0.00 0.00 35.82 3.02
4580 5308 3.947910 ACATCTTTGTCAGCATTTGGG 57.052 42.857 0.00 0.00 0.00 4.12
4891 5681 4.026310 CAGTTCATTCACTTTTGCAACAGC 60.026 41.667 12.50 0.00 0.00 4.40
4896 5686 3.641437 TCACTTTTGCAACAGCCATAC 57.359 42.857 12.50 0.00 0.00 2.39
5254 6066 3.874392 AAATTATGGGCTGACTTGCAC 57.126 42.857 0.00 0.00 36.79 4.57
5267 6079 4.454678 TGACTTGCACTTATCCATGGATC 58.545 43.478 30.61 16.20 36.17 3.36
5338 7012 5.582689 AAATGTATGCCTTGGCTTAGTTC 57.417 39.130 13.18 0.89 0.00 3.01
5342 7016 0.394938 TGCCTTGGCTTAGTTCGTCA 59.605 50.000 13.18 0.00 0.00 4.35
5343 7017 1.202710 TGCCTTGGCTTAGTTCGTCAA 60.203 47.619 13.18 0.00 0.00 3.18
5345 7019 2.488153 GCCTTGGCTTAGTTCGTCAAAT 59.512 45.455 4.11 0.00 0.00 2.32
5346 7020 3.057526 GCCTTGGCTTAGTTCGTCAAATT 60.058 43.478 4.11 0.00 0.00 1.82
5347 7021 4.155280 GCCTTGGCTTAGTTCGTCAAATTA 59.845 41.667 4.11 0.00 0.00 1.40
5348 7022 5.673818 GCCTTGGCTTAGTTCGTCAAATTAG 60.674 44.000 4.11 0.00 0.00 1.73
5350 7024 5.856126 TGGCTTAGTTCGTCAAATTAGTG 57.144 39.130 0.00 0.00 0.00 2.74
5351 7025 5.302360 TGGCTTAGTTCGTCAAATTAGTGT 58.698 37.500 0.00 0.00 0.00 3.55
5352 7026 6.457355 TGGCTTAGTTCGTCAAATTAGTGTA 58.543 36.000 0.00 0.00 0.00 2.90
5354 7028 6.810182 GGCTTAGTTCGTCAAATTAGTGTAGA 59.190 38.462 0.00 0.00 0.00 2.59
5445 7121 0.107848 AGGCCCGTGCATGTAACTAC 60.108 55.000 0.00 0.00 40.13 2.73
5451 7127 3.308866 CCCGTGCATGTAACTACTTAAGC 59.691 47.826 4.96 0.00 0.00 3.09
5909 8723 0.106819 AATTGCCTGGGCTAGCAGAG 60.107 55.000 18.24 11.01 40.73 3.35
5918 8732 2.699496 CTAGCAGAGGGGGAGGGT 59.301 66.667 0.00 0.00 0.00 4.34
5925 8739 1.616628 GAGGGGGAGGGTGTGACAT 60.617 63.158 0.00 0.00 0.00 3.06
5974 8794 1.571955 GGGGGTTCCTGCATTTCATT 58.428 50.000 0.00 0.00 0.00 2.57
6019 8839 1.450848 CCATGACATGCAGAGCCGT 60.451 57.895 10.10 0.00 0.00 5.68
6097 8923 4.007644 CGCCACTCCAGCAGTCCA 62.008 66.667 0.00 0.00 30.26 4.02
6106 8932 1.298993 CAGCAGTCCAGCATCCACT 59.701 57.895 0.00 0.00 36.85 4.00
6146 8972 2.594592 GCACAACTGCCGAACCCT 60.595 61.111 0.00 0.00 37.45 4.34
6205 9031 0.593128 CAAGAAGGAGCAAACCCACG 59.407 55.000 0.00 0.00 0.00 4.94
6328 9154 1.228063 CAGCCACAAGAGCACACCT 60.228 57.895 0.00 0.00 0.00 4.00
6481 9317 4.809496 CAGGCCAAGCAGCGGGAT 62.809 66.667 5.01 0.00 0.00 3.85
6535 9371 4.087892 CACCACCAGCTCCCTCCG 62.088 72.222 0.00 0.00 0.00 4.63
6536 9372 4.640690 ACCACCAGCTCCCTCCGT 62.641 66.667 0.00 0.00 0.00 4.69
6581 9417 2.124736 CCCCAACGATGACGCCAT 60.125 61.111 0.00 0.00 43.96 4.40
6648 9536 2.507102 CATCGCGACGAAGCTGGT 60.507 61.111 12.93 0.00 39.99 4.00
6770 9659 5.073691 TCCTCTTTTCCTCTCTGTCCAAATT 59.926 40.000 0.00 0.00 0.00 1.82
6791 9680 0.109532 TTGGAGGGCGTGACAATGAA 59.890 50.000 0.00 0.00 0.00 2.57
6795 9684 1.734465 GAGGGCGTGACAATGAAGAAG 59.266 52.381 0.00 0.00 0.00 2.85
6817 9706 7.756722 AGAAGCAGAAAACATATATGCACAAAC 59.243 33.333 12.79 0.74 39.34 2.93
6833 9722 4.564821 GCACAAACCCATCAGTACCTCTAA 60.565 45.833 0.00 0.00 0.00 2.10
6915 9805 7.771927 ACAATGAAATGGACAGAAAGATTCT 57.228 32.000 0.00 0.00 41.70 2.40
6936 9826 3.096092 TCAATTTCCAATAGGCCACCAC 58.904 45.455 5.01 0.00 33.74 4.16
7000 9892 6.823689 GCTTTTCCAGTATCCTTTGTCTCATA 59.176 38.462 0.00 0.00 0.00 2.15
7310 10206 5.336451 GGCCCTAACCTGTAATTTTGAACAG 60.336 44.000 0.00 0.00 42.25 3.16
7311 10207 5.243060 GCCCTAACCTGTAATTTTGAACAGT 59.757 40.000 5.58 0.00 41.25 3.55
7312 10208 6.569801 GCCCTAACCTGTAATTTTGAACAGTC 60.570 42.308 5.58 0.00 41.25 3.51
7313 10209 6.715264 CCCTAACCTGTAATTTTGAACAGTCT 59.285 38.462 5.58 0.00 41.25 3.24
7314 10210 7.230712 CCCTAACCTGTAATTTTGAACAGTCTT 59.769 37.037 5.58 0.59 41.25 3.01
7315 10211 8.076178 CCTAACCTGTAATTTTGAACAGTCTTG 58.924 37.037 5.58 0.00 41.25 3.02
7316 10212 5.831997 ACCTGTAATTTTGAACAGTCTTGC 58.168 37.500 5.58 0.00 41.25 4.01
7317 10213 5.594317 ACCTGTAATTTTGAACAGTCTTGCT 59.406 36.000 5.58 0.00 41.25 3.91
7318 10214 6.770785 ACCTGTAATTTTGAACAGTCTTGCTA 59.229 34.615 5.58 0.00 41.25 3.49
7319 10215 7.284489 ACCTGTAATTTTGAACAGTCTTGCTAA 59.716 33.333 5.58 0.00 41.25 3.09
7320 10216 7.805071 CCTGTAATTTTGAACAGTCTTGCTAAG 59.195 37.037 5.58 0.00 41.25 2.18
7321 10217 8.220755 TGTAATTTTGAACAGTCTTGCTAAGT 57.779 30.769 0.00 0.00 0.00 2.24
7322 10218 8.342634 TGTAATTTTGAACAGTCTTGCTAAGTC 58.657 33.333 0.00 0.00 0.00 3.01
7323 10219 7.573968 AATTTTGAACAGTCTTGCTAAGTCT 57.426 32.000 0.00 0.00 0.00 3.24
7324 10220 6.604735 TTTTGAACAGTCTTGCTAAGTCTC 57.395 37.500 0.00 0.00 0.00 3.36
7325 10221 4.937201 TGAACAGTCTTGCTAAGTCTCA 57.063 40.909 0.00 0.00 0.00 3.27
7326 10222 4.876125 TGAACAGTCTTGCTAAGTCTCAG 58.124 43.478 0.00 0.00 0.00 3.35
7327 10223 4.342378 TGAACAGTCTTGCTAAGTCTCAGT 59.658 41.667 0.00 0.00 0.00 3.41
7328 10224 4.513198 ACAGTCTTGCTAAGTCTCAGTC 57.487 45.455 0.00 0.00 0.00 3.51
7329 10225 3.057876 ACAGTCTTGCTAAGTCTCAGTCG 60.058 47.826 0.00 0.00 0.00 4.18
7330 10226 3.189495 CAGTCTTGCTAAGTCTCAGTCGA 59.811 47.826 0.00 0.00 0.00 4.20
7331 10227 3.189702 AGTCTTGCTAAGTCTCAGTCGAC 59.810 47.826 7.70 7.70 0.00 4.20
7332 10228 3.189702 GTCTTGCTAAGTCTCAGTCGACT 59.810 47.826 13.58 13.58 45.73 4.18
7333 10229 4.392445 GTCTTGCTAAGTCTCAGTCGACTA 59.608 45.833 19.57 0.00 43.14 2.59
7334 10230 5.001874 TCTTGCTAAGTCTCAGTCGACTAA 58.998 41.667 19.57 1.94 43.14 2.24
7335 10231 4.948608 TGCTAAGTCTCAGTCGACTAAG 57.051 45.455 19.57 14.47 43.14 2.18
7336 10232 4.576879 TGCTAAGTCTCAGTCGACTAAGA 58.423 43.478 19.57 17.01 43.14 2.10
7337 10233 4.392445 TGCTAAGTCTCAGTCGACTAAGAC 59.608 45.833 33.03 33.03 43.14 3.01
7341 10237 3.680937 AGTCTCAGTCGACTAAGACTTCG 59.319 47.826 35.84 15.67 46.73 3.79
7342 10238 4.800249 AGTCTCAGTCGACTAAGACTTCGT 60.800 45.833 35.84 20.46 46.73 3.85
7343 10239 6.255330 AGTCTCAGTCGACTAAGACTTCGTT 61.255 44.000 35.84 20.14 46.73 3.85
7344 10240 7.013787 AGTCTCAGTCGACTAAGACTTCGTTA 61.014 42.308 35.84 5.55 46.73 3.18
7345 10241 8.428410 AGTCTCAGTCGACTAAGACTTCGTTAA 61.428 40.741 35.84 4.85 46.73 2.01
7358 10254 4.724303 ACTTCGTTAAGTCTCAGTCGATG 58.276 43.478 0.00 0.00 42.42 3.84
7359 10255 3.132629 TCGTTAAGTCTCAGTCGATGC 57.867 47.619 0.00 0.00 0.00 3.91
7360 10256 2.747989 TCGTTAAGTCTCAGTCGATGCT 59.252 45.455 0.00 0.00 0.00 3.79
7361 10257 3.937079 TCGTTAAGTCTCAGTCGATGCTA 59.063 43.478 0.00 0.00 0.00 3.49
7362 10258 4.575236 TCGTTAAGTCTCAGTCGATGCTAT 59.425 41.667 0.00 0.00 0.00 2.97
7363 10259 5.756833 TCGTTAAGTCTCAGTCGATGCTATA 59.243 40.000 0.00 0.00 0.00 1.31
7364 10260 6.427242 TCGTTAAGTCTCAGTCGATGCTATAT 59.573 38.462 0.00 0.00 0.00 0.86
7365 10261 6.739100 CGTTAAGTCTCAGTCGATGCTATATC 59.261 42.308 0.00 0.00 0.00 1.63
7366 10262 5.637006 AAGTCTCAGTCGATGCTATATCC 57.363 43.478 0.00 0.00 0.00 2.59
7367 10263 4.657013 AGTCTCAGTCGATGCTATATCCA 58.343 43.478 0.00 0.00 0.00 3.41
7368 10264 5.260424 AGTCTCAGTCGATGCTATATCCAT 58.740 41.667 0.00 0.00 0.00 3.41
7369 10265 5.125257 AGTCTCAGTCGATGCTATATCCATG 59.875 44.000 0.00 0.00 0.00 3.66
7370 10266 5.124617 GTCTCAGTCGATGCTATATCCATGA 59.875 44.000 0.00 0.00 0.00 3.07
7371 10267 5.356470 TCTCAGTCGATGCTATATCCATGAG 59.644 44.000 0.00 0.00 0.00 2.90
7372 10268 5.256474 TCAGTCGATGCTATATCCATGAGA 58.744 41.667 0.00 0.00 0.00 3.27
7373 10269 5.890419 TCAGTCGATGCTATATCCATGAGAT 59.110 40.000 0.00 0.00 39.15 2.75
7374 10270 6.379417 TCAGTCGATGCTATATCCATGAGATT 59.621 38.462 0.00 0.00 36.33 2.40
7375 10271 7.040494 CAGTCGATGCTATATCCATGAGATTT 58.960 38.462 0.00 0.00 36.33 2.17
7376 10272 7.548427 CAGTCGATGCTATATCCATGAGATTTT 59.452 37.037 0.00 0.00 36.33 1.82
7377 10273 8.753133 AGTCGATGCTATATCCATGAGATTTTA 58.247 33.333 0.00 0.00 36.33 1.52
7378 10274 8.812329 GTCGATGCTATATCCATGAGATTTTAC 58.188 37.037 0.00 0.00 36.33 2.01
7379 10275 8.531146 TCGATGCTATATCCATGAGATTTTACA 58.469 33.333 0.00 0.00 36.33 2.41
7380 10276 9.322773 CGATGCTATATCCATGAGATTTTACAT 57.677 33.333 0.00 0.00 36.33 2.29
7388 10284 8.632906 ATCCATGAGATTTTACATTGAGATCC 57.367 34.615 0.00 0.00 0.00 3.36
7389 10285 6.707608 TCCATGAGATTTTACATTGAGATCCG 59.292 38.462 0.00 0.00 0.00 4.18
7390 10286 6.484643 CCATGAGATTTTACATTGAGATCCGT 59.515 38.462 0.00 0.00 0.00 4.69
7391 10287 6.908870 TGAGATTTTACATTGAGATCCGTG 57.091 37.500 0.00 0.00 0.00 4.94
7392 10288 5.294306 TGAGATTTTACATTGAGATCCGTGC 59.706 40.000 0.00 0.00 0.00 5.34
7393 10289 5.185454 AGATTTTACATTGAGATCCGTGCA 58.815 37.500 0.00 0.00 0.00 4.57
7394 10290 5.647658 AGATTTTACATTGAGATCCGTGCAA 59.352 36.000 0.00 0.00 0.00 4.08
7395 10291 5.697473 TTTTACATTGAGATCCGTGCAAA 57.303 34.783 0.00 0.00 0.00 3.68
7396 10292 5.697473 TTTACATTGAGATCCGTGCAAAA 57.303 34.783 0.00 0.00 0.00 2.44
7397 10293 5.895636 TTACATTGAGATCCGTGCAAAAT 57.104 34.783 0.00 0.00 0.00 1.82
7398 10294 4.789012 ACATTGAGATCCGTGCAAAATT 57.211 36.364 0.00 0.00 0.00 1.82
7399 10295 5.138125 ACATTGAGATCCGTGCAAAATTT 57.862 34.783 0.00 0.00 0.00 1.82
7400 10296 5.540911 ACATTGAGATCCGTGCAAAATTTT 58.459 33.333 0.00 0.00 0.00 1.82
7401 10297 5.634859 ACATTGAGATCCGTGCAAAATTTTC 59.365 36.000 0.00 0.00 0.00 2.29
7402 10298 5.452078 TTGAGATCCGTGCAAAATTTTCT 57.548 34.783 0.00 0.00 0.00 2.52
7403 10299 5.452078 TGAGATCCGTGCAAAATTTTCTT 57.548 34.783 0.00 0.00 0.00 2.52
7404 10300 5.841810 TGAGATCCGTGCAAAATTTTCTTT 58.158 33.333 0.00 0.00 0.00 2.52
7405 10301 6.279882 TGAGATCCGTGCAAAATTTTCTTTT 58.720 32.000 0.00 0.00 0.00 2.27
7406 10302 6.420604 TGAGATCCGTGCAAAATTTTCTTTTC 59.579 34.615 0.00 0.00 0.00 2.29
7407 10303 6.279882 AGATCCGTGCAAAATTTTCTTTTCA 58.720 32.000 0.00 0.00 0.00 2.69
7408 10304 5.964887 TCCGTGCAAAATTTTCTTTTCAG 57.035 34.783 0.00 0.00 0.00 3.02
7409 10305 5.415221 TCCGTGCAAAATTTTCTTTTCAGT 58.585 33.333 0.00 0.00 0.00 3.41
7410 10306 5.872070 TCCGTGCAAAATTTTCTTTTCAGTT 59.128 32.000 0.00 0.00 0.00 3.16
7411 10307 6.370166 TCCGTGCAAAATTTTCTTTTCAGTTT 59.630 30.769 0.00 0.00 0.00 2.66
7412 10308 7.020602 CCGTGCAAAATTTTCTTTTCAGTTTT 58.979 30.769 0.00 0.00 0.00 2.43
7413 10309 7.536964 CCGTGCAAAATTTTCTTTTCAGTTTTT 59.463 29.630 0.00 0.00 0.00 1.94
7414 10310 8.566402 CGTGCAAAATTTTCTTTTCAGTTTTTC 58.434 29.630 0.00 0.00 0.00 2.29
7415 10311 8.849490 GTGCAAAATTTTCTTTTCAGTTTTTCC 58.151 29.630 0.00 0.00 0.00 3.13
7416 10312 8.791675 TGCAAAATTTTCTTTTCAGTTTTTCCT 58.208 25.926 0.00 0.00 0.00 3.36
7417 10313 9.624697 GCAAAATTTTCTTTTCAGTTTTTCCTT 57.375 25.926 0.00 0.00 0.00 3.36
7424 10320 8.771920 TTCTTTTCAGTTTTTCCTTTTTCTCC 57.228 30.769 0.00 0.00 0.00 3.71
7425 10321 8.134202 TCTTTTCAGTTTTTCCTTTTTCTCCT 57.866 30.769 0.00 0.00 0.00 3.69
7426 10322 8.593679 TCTTTTCAGTTTTTCCTTTTTCTCCTT 58.406 29.630 0.00 0.00 0.00 3.36
7427 10323 8.546597 TTTTCAGTTTTTCCTTTTTCTCCTTG 57.453 30.769 0.00 0.00 0.00 3.61
7428 10324 5.660460 TCAGTTTTTCCTTTTTCTCCTTGC 58.340 37.500 0.00 0.00 0.00 4.01
7429 10325 5.186797 TCAGTTTTTCCTTTTTCTCCTTGCA 59.813 36.000 0.00 0.00 0.00 4.08
7430 10326 6.051074 CAGTTTTTCCTTTTTCTCCTTGCAT 58.949 36.000 0.00 0.00 0.00 3.96
7431 10327 6.018507 CAGTTTTTCCTTTTTCTCCTTGCATG 60.019 38.462 0.00 0.00 0.00 4.06
7432 10328 5.612725 TTTTCCTTTTTCTCCTTGCATGT 57.387 34.783 0.00 0.00 0.00 3.21
7433 10329 5.612725 TTTCCTTTTTCTCCTTGCATGTT 57.387 34.783 0.00 0.00 0.00 2.71
7434 10330 6.723298 TTTCCTTTTTCTCCTTGCATGTTA 57.277 33.333 0.00 0.00 0.00 2.41
7435 10331 6.916360 TTCCTTTTTCTCCTTGCATGTTAT 57.084 33.333 0.00 0.00 0.00 1.89
7436 10332 8.415950 TTTCCTTTTTCTCCTTGCATGTTATA 57.584 30.769 0.00 0.00 0.00 0.98
7437 10333 8.593945 TTCCTTTTTCTCCTTGCATGTTATAT 57.406 30.769 0.00 0.00 0.00 0.86
7438 10334 8.225603 TCCTTTTTCTCCTTGCATGTTATATC 57.774 34.615 0.00 0.00 0.00 1.63
7439 10335 7.833682 TCCTTTTTCTCCTTGCATGTTATATCA 59.166 33.333 0.00 0.00 0.00 2.15
7440 10336 7.917505 CCTTTTTCTCCTTGCATGTTATATCAC 59.082 37.037 0.00 0.00 0.00 3.06
7441 10337 8.579850 TTTTTCTCCTTGCATGTTATATCACT 57.420 30.769 0.00 0.00 0.00 3.41
7442 10338 8.579850 TTTTCTCCTTGCATGTTATATCACTT 57.420 30.769 0.00 0.00 0.00 3.16
7443 10339 7.558161 TTCTCCTTGCATGTTATATCACTTG 57.442 36.000 0.00 0.00 0.00 3.16
7444 10340 6.888105 TCTCCTTGCATGTTATATCACTTGA 58.112 36.000 7.02 0.00 0.00 3.02
7445 10341 6.763135 TCTCCTTGCATGTTATATCACTTGAC 59.237 38.462 7.02 0.84 0.00 3.18
7446 10342 6.653020 TCCTTGCATGTTATATCACTTGACT 58.347 36.000 7.02 0.00 0.00 3.41
7447 10343 7.112122 TCCTTGCATGTTATATCACTTGACTT 58.888 34.615 7.02 0.00 0.00 3.01
7448 10344 8.264347 TCCTTGCATGTTATATCACTTGACTTA 58.736 33.333 7.02 0.00 0.00 2.24
7449 10345 8.554528 CCTTGCATGTTATATCACTTGACTTAG 58.445 37.037 7.02 0.01 0.00 2.18
7450 10346 9.317936 CTTGCATGTTATATCACTTGACTTAGA 57.682 33.333 7.02 0.00 0.00 2.10
7451 10347 8.648557 TGCATGTTATATCACTTGACTTAGAC 57.351 34.615 7.02 0.00 0.00 2.59
7452 10348 8.478066 TGCATGTTATATCACTTGACTTAGACT 58.522 33.333 7.02 0.00 0.00 3.24
7453 10349 9.319143 GCATGTTATATCACTTGACTTAGACTT 57.681 33.333 7.02 0.00 0.00 3.01
7455 10351 9.823647 ATGTTATATCACTTGACTTAGACTTGG 57.176 33.333 0.00 0.00 0.00 3.61
7456 10352 8.812972 TGTTATATCACTTGACTTAGACTTGGT 58.187 33.333 0.00 0.00 0.00 3.67
7457 10353 9.654663 GTTATATCACTTGACTTAGACTTGGTT 57.345 33.333 0.00 0.00 0.00 3.67
7468 10364 9.871238 TGACTTAGACTTGGTTAAATATCAGTC 57.129 33.333 0.00 0.00 0.00 3.51
7469 10365 8.928270 ACTTAGACTTGGTTAAATATCAGTCG 57.072 34.615 0.00 0.00 0.00 4.18
7470 10366 8.746530 ACTTAGACTTGGTTAAATATCAGTCGA 58.253 33.333 0.00 0.00 0.00 4.20
7471 10367 8.922058 TTAGACTTGGTTAAATATCAGTCGAC 57.078 34.615 7.70 7.70 0.00 4.20
7472 10368 7.171630 AGACTTGGTTAAATATCAGTCGACT 57.828 36.000 13.58 13.58 0.00 4.18
7473 10369 7.036220 AGACTTGGTTAAATATCAGTCGACTG 58.964 38.462 34.76 34.76 45.08 3.51
7569 10494 8.211629 GTCTAACCTTGTGTATTATCCAGGATT 58.788 37.037 7.44 0.00 0.00 3.01
7620 10545 3.892284 TGTCAACCAGGTTATGTGTGTT 58.108 40.909 3.89 0.00 0.00 3.32
7622 10547 4.097135 TGTCAACCAGGTTATGTGTGTTTG 59.903 41.667 3.89 0.00 0.00 2.93
7623 10548 3.634448 TCAACCAGGTTATGTGTGTTTGG 59.366 43.478 3.89 0.00 0.00 3.28
7624 10549 3.306472 ACCAGGTTATGTGTGTTTGGT 57.694 42.857 0.00 0.00 32.88 3.67
7625 10550 4.440826 ACCAGGTTATGTGTGTTTGGTA 57.559 40.909 0.00 0.00 35.80 3.25
7626 10551 4.139038 ACCAGGTTATGTGTGTTTGGTAC 58.861 43.478 0.00 0.00 35.80 3.34
7627 10552 4.141344 ACCAGGTTATGTGTGTTTGGTACT 60.141 41.667 0.00 0.00 35.80 2.73
7628 10553 4.454504 CCAGGTTATGTGTGTTTGGTACTC 59.545 45.833 0.00 0.00 0.00 2.59
7629 10554 4.454504 CAGGTTATGTGTGTTTGGTACTCC 59.545 45.833 0.00 0.00 0.00 3.85
7630 10555 3.754850 GGTTATGTGTGTTTGGTACTCCC 59.245 47.826 0.00 0.00 0.00 4.30
7631 10556 4.506095 GGTTATGTGTGTTTGGTACTCCCT 60.506 45.833 0.00 0.00 0.00 4.20
7632 10557 2.922740 TGTGTGTTTGGTACTCCCTC 57.077 50.000 0.00 0.00 0.00 4.30
7633 10558 1.418637 TGTGTGTTTGGTACTCCCTCC 59.581 52.381 0.00 0.00 0.00 4.30
7634 10559 0.682852 TGTGTTTGGTACTCCCTCCG 59.317 55.000 0.00 0.00 0.00 4.63
7635 10560 0.683412 GTGTTTGGTACTCCCTCCGT 59.317 55.000 0.00 0.00 0.00 4.69
7636 10561 0.971386 TGTTTGGTACTCCCTCCGTC 59.029 55.000 0.00 0.00 0.00 4.79
7637 10562 0.248565 GTTTGGTACTCCCTCCGTCC 59.751 60.000 0.00 0.00 0.00 4.79
7638 10563 0.906282 TTTGGTACTCCCTCCGTCCC 60.906 60.000 0.00 0.00 0.00 4.46
7639 10564 2.096707 TTGGTACTCCCTCCGTCCCA 62.097 60.000 0.00 0.00 0.00 4.37
7640 10565 1.305549 GGTACTCCCTCCGTCCCAA 60.306 63.158 0.00 0.00 0.00 4.12
7641 10566 0.906282 GGTACTCCCTCCGTCCCAAA 60.906 60.000 0.00 0.00 0.00 3.28
7642 10567 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
7643 10568 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
7644 10569 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
7645 10570 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
7646 10571 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
7647 10572 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
7648 10573 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
7649 10574 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
7650 10575 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
7651 10576 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
7652 10577 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
7653 10578 3.568007 TCCGTCCCAAAATTCTTGTCTTG 59.432 43.478 0.00 0.00 0.00 3.02
7654 10579 3.305335 CCGTCCCAAAATTCTTGTCTTGG 60.305 47.826 0.00 0.00 38.45 3.61
7655 10580 3.568007 CGTCCCAAAATTCTTGTCTTGGA 59.432 43.478 5.99 0.95 40.72 3.53
7656 10581 4.218417 CGTCCCAAAATTCTTGTCTTGGAT 59.782 41.667 5.99 0.00 40.72 3.41
7657 10582 5.278957 CGTCCCAAAATTCTTGTCTTGGATT 60.279 40.000 5.99 0.00 40.72 3.01
7658 10583 6.524734 GTCCCAAAATTCTTGTCTTGGATTT 58.475 36.000 5.99 0.00 40.72 2.17
7659 10584 6.424812 GTCCCAAAATTCTTGTCTTGGATTTG 59.575 38.462 5.99 0.00 40.72 2.32
7660 10585 6.099557 TCCCAAAATTCTTGTCTTGGATTTGT 59.900 34.615 5.99 0.00 40.72 2.83
7661 10586 6.424812 CCCAAAATTCTTGTCTTGGATTTGTC 59.575 38.462 5.99 0.00 40.72 3.18
7662 10587 7.212274 CCAAAATTCTTGTCTTGGATTTGTCT 58.788 34.615 0.00 0.00 40.72 3.41
7663 10588 8.359642 CCAAAATTCTTGTCTTGGATTTGTCTA 58.640 33.333 0.00 0.00 40.72 2.59
7664 10589 9.748708 CAAAATTCTTGTCTTGGATTTGTCTAA 57.251 29.630 0.00 0.00 0.00 2.10
7669 10594 8.251750 TCTTGTCTTGGATTTGTCTAAATACG 57.748 34.615 0.00 0.00 39.54 3.06
7670 10595 6.978343 TGTCTTGGATTTGTCTAAATACGG 57.022 37.500 0.00 0.00 39.54 4.02
7671 10596 6.703319 TGTCTTGGATTTGTCTAAATACGGA 58.297 36.000 0.00 0.00 39.54 4.69
7672 10597 7.335627 TGTCTTGGATTTGTCTAAATACGGAT 58.664 34.615 0.00 0.00 39.54 4.18
7673 10598 7.279981 TGTCTTGGATTTGTCTAAATACGGATG 59.720 37.037 0.00 0.00 39.54 3.51
7674 10599 7.280205 GTCTTGGATTTGTCTAAATACGGATGT 59.720 37.037 0.00 0.00 39.54 3.06
7675 10600 8.479689 TCTTGGATTTGTCTAAATACGGATGTA 58.520 33.333 0.00 0.00 39.54 2.29
7676 10601 9.273016 CTTGGATTTGTCTAAATACGGATGTAT 57.727 33.333 0.00 0.00 43.14 2.29
7677 10602 8.827177 TGGATTTGTCTAAATACGGATGTATC 57.173 34.615 0.00 0.00 40.42 2.24
7678 10603 8.425703 TGGATTTGTCTAAATACGGATGTATCA 58.574 33.333 0.00 0.00 40.42 2.15
7679 10604 9.268268 GGATTTGTCTAAATACGGATGTATCAA 57.732 33.333 0.00 0.00 40.42 2.57
7681 10606 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
7682 10607 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
7683 10608 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
7684 10609 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
7685 10610 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
7686 10611 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
7687 10612 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
7688 10613 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
7689 10614 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
7690 10615 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
7691 10616 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
7692 10617 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
7693 10618 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
7694 10619 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
7695 10620 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
7705 10630 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
7706 10631 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
7707 10632 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
7708 10633 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
7725 10650 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
7726 10651 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
7727 10652 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
7728 10653 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
7729 10654 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
7730 10655 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
7738 10663 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
7739 10664 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
7740 10665 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
7741 10666 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
7743 10668 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
7747 10672 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
7867 10793 7.953752 ACTATACAGAGGTAATTAAGCTGTCC 58.046 38.462 15.35 0.64 40.08 4.02
8075 11017 2.708051 GGTAACTACCCTGAAACTGGC 58.292 52.381 0.00 0.00 40.53 4.85
8099 11041 0.482446 ATTGTTGGGTGGAGCCTTGA 59.518 50.000 0.00 0.00 37.43 3.02
8104 11046 1.360393 TGGGTGGAGCCTTGACCTTT 61.360 55.000 0.00 0.00 37.43 3.11
8172 11114 3.331150 TGCCTTTTGTCGTCGTCATATT 58.669 40.909 0.00 0.00 0.00 1.28
8490 11438 4.284490 AGCTTTGTCAATGGAGAGTAGTGA 59.716 41.667 1.08 0.00 0.00 3.41
8574 11522 7.014518 TCACAAATGAAACCATCAAGTGATCTT 59.985 33.333 0.00 0.00 42.54 2.40
8652 11601 1.310216 TGATGCATGACAGGCAGTGC 61.310 55.000 20.47 6.55 45.68 4.40
8815 11764 7.112122 AGAATTGTGGTACAAGATGAATGCTA 58.888 34.615 0.00 0.00 44.16 3.49
8822 11771 3.285484 ACAAGATGAATGCTAAGGCCAG 58.715 45.455 5.01 0.00 37.74 4.85
9121 12070 3.998672 GTTCTGTCCGCGGGTCCA 61.999 66.667 27.83 18.25 0.00 4.02
9262 12211 1.798725 CATCGTTTGCGCCTTGCTG 60.799 57.895 4.18 0.00 46.63 4.41
9298 12247 0.039618 TGGCCTTGATTTGGACTCCC 59.960 55.000 3.32 0.00 32.71 4.30
9334 12286 4.597507 GGTTTATCTGTCATGATAGGGGGA 59.402 45.833 18.24 0.90 31.51 4.81
9474 12431 2.356125 CCCTGAATTGATGGACGACCTT 60.356 50.000 5.33 0.00 37.04 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.677942 GTCGGGTTAGAGGACGATCT 58.322 55.000 0.00 0.00 37.69 2.75
55 56 0.107897 CCCGAACATCGTCCATCCAA 60.108 55.000 0.00 0.00 38.40 3.53
98 99 0.250467 GTGAACCTCAAGGAGCAGCA 60.250 55.000 2.30 0.00 38.94 4.41
108 109 1.191489 TGGAGCGGATGTGAACCTCA 61.191 55.000 0.00 0.00 0.00 3.86
198 199 1.377366 GCATCTCGTCCTCGACTCCA 61.377 60.000 0.00 0.00 41.35 3.86
212 213 2.746375 GGGTCATCCGTGGGCATCT 61.746 63.158 0.00 0.00 33.83 2.90
229 230 2.435586 CACAGAGGCTGCTTCGGG 60.436 66.667 15.42 10.17 34.37 5.14
260 261 1.450312 CGAGATGTTGACCAGCCCC 60.450 63.158 0.00 0.00 0.00 5.80
277 278 3.659089 AACCCCAATCCGTCGCTCG 62.659 63.158 0.00 0.00 39.52 5.03
283 284 4.733542 CCGCCAACCCCAATCCGT 62.734 66.667 0.00 0.00 0.00 4.69
294 295 2.066393 CCCTCATCCTCTCCGCCAA 61.066 63.158 0.00 0.00 0.00 4.52
331 332 2.353607 CCGCGTCCTAGTCATCGC 60.354 66.667 4.92 0.00 44.23 4.58
350 351 2.440247 CAAACCCATCGCCCTCCC 60.440 66.667 0.00 0.00 0.00 4.30
371 372 6.010219 ACCTCACTATAAGTTGCACCAAATT 58.990 36.000 0.00 0.00 35.79 1.82
399 400 1.202927 CCCCACAACAGACCAGACAAT 60.203 52.381 0.00 0.00 0.00 2.71
400 401 0.182537 CCCCACAACAGACCAGACAA 59.817 55.000 0.00 0.00 0.00 3.18
445 446 7.465116 CCTCATATCCAACCCAAATCTAGAAT 58.535 38.462 0.00 0.00 0.00 2.40
447 448 5.310594 CCCTCATATCCAACCCAAATCTAGA 59.689 44.000 0.00 0.00 0.00 2.43
459 460 0.758734 CAGCGACCCCTCATATCCAA 59.241 55.000 0.00 0.00 0.00 3.53
477 478 0.916086 ATAAATGCCCGGACTGACCA 59.084 50.000 0.73 0.00 38.90 4.02
489 490 4.144297 TCCTCATACCAAGCCATAAATGC 58.856 43.478 0.00 0.00 0.00 3.56
500 501 3.420893 CCAAACAAGCTCCTCATACCAA 58.579 45.455 0.00 0.00 0.00 3.67
501 502 2.290896 CCCAAACAAGCTCCTCATACCA 60.291 50.000 0.00 0.00 0.00 3.25
533 534 0.537188 AGCCCGACCACTAATCTGTG 59.463 55.000 0.00 0.00 37.66 3.66
536 537 0.824759 GACAGCCCGACCACTAATCT 59.175 55.000 0.00 0.00 0.00 2.40
538 539 1.905512 GGACAGCCCGACCACTAAT 59.094 57.895 0.00 0.00 0.00 1.73
550 551 4.681978 ACAGCCCGAACGGACAGC 62.682 66.667 15.07 9.56 37.50 4.40
551 552 2.432628 GACAGCCCGAACGGACAG 60.433 66.667 15.07 2.49 37.50 3.51
552 553 3.998672 GGACAGCCCGAACGGACA 61.999 66.667 15.07 0.00 37.50 4.02
573 574 2.158740 TCAAACCGGTCTCAAACATCCA 60.159 45.455 8.04 0.00 0.00 3.41
577 578 1.961793 CCTCAAACCGGTCTCAAACA 58.038 50.000 8.04 0.00 0.00 2.83
689 690 1.360551 CGGCTCGTGTAGATCCAGG 59.639 63.158 0.00 0.00 34.89 4.45
786 787 0.613853 TGCGGTTCAGGCTACCTAGT 60.614 55.000 4.99 0.00 33.35 2.57
998 999 2.297315 CTGCTACTAGCCGAATCCATGA 59.703 50.000 5.58 0.00 41.51 3.07
1105 1106 2.044650 CGGTGGTAGACTCGGGGA 60.045 66.667 0.00 0.00 0.00 4.81
1365 1369 1.618837 AGCGGCGATCTTATACATGGT 59.381 47.619 12.98 0.00 0.00 3.55
1419 1423 8.523915 AATATTGCCTTGATTATGTTCTCACA 57.476 30.769 0.00 0.00 37.31 3.58
1420 1424 9.807649 AAAATATTGCCTTGATTATGTTCTCAC 57.192 29.630 0.00 0.00 0.00 3.51
1552 1556 4.818546 CAGAATGACACAAGAAGTTGGTCT 59.181 41.667 0.00 0.00 39.69 3.85
1604 1612 3.040147 AGTATGAAACTGGTCCACACG 57.960 47.619 0.00 0.00 36.93 4.49
1815 1823 6.772770 TTCAAATCATTCATGCAACACAAG 57.227 33.333 0.00 0.00 0.00 3.16
1890 1898 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
1891 1899 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
1892 1900 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
1893 1901 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
1894 1902 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
1895 1903 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
1896 1904 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
1897 1905 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
1898 1906 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
1899 1907 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
1900 1908 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
1901 1909 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
1902 1910 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
1903 1911 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
1904 1912 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
1905 1913 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
1906 1914 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
1907 1915 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
1908 1916 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
1909 1917 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
1910 1918 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
1911 1919 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
1912 1920 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
1913 1921 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
1914 1922 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
1915 1923 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
1916 1924 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
1926 1934 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
1927 1935 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
1928 1936 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
1929 1937 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
1930 1938 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
1931 1939 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
1932 1940 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
1933 1941 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
1934 1942 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
1935 1943 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
1936 1944 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
1937 1945 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
1938 1946 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
1939 1947 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
1940 1948 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
1941 1949 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
1942 1950 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
1943 1951 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
1944 1952 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
1956 1964 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
1959 1967 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
1960 1968 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
1961 1969 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
1962 1970 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
1968 1976 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
1969 1977 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
1970 1978 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
1971 1979 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
1972 1980 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
1992 2000 5.824624 CAGATCCAGCCAAGCTATCTAAAAA 59.175 40.000 2.40 0.00 36.40 1.94
1993 2001 5.371526 CAGATCCAGCCAAGCTATCTAAAA 58.628 41.667 2.40 0.00 36.40 1.52
1994 2002 4.202398 CCAGATCCAGCCAAGCTATCTAAA 60.202 45.833 2.40 0.00 36.40 1.85
1995 2003 3.326006 CCAGATCCAGCCAAGCTATCTAA 59.674 47.826 2.40 0.00 36.40 2.10
2208 2216 3.932710 CGAACAGAAAAGCTACTGGCATA 59.067 43.478 16.13 0.00 44.79 3.14
2356 2364 4.286032 ACAGTAACTCCTGCCAGTAAATCA 59.714 41.667 0.00 0.00 35.83 2.57
2495 2503 5.455056 AATCCTACACTACATTAGAGGCG 57.545 43.478 0.00 0.00 0.00 5.52
2510 2518 8.465273 AAAATTCCATACAGCCTTAATCCTAC 57.535 34.615 0.00 0.00 0.00 3.18
2515 2523 6.838612 TGCCTAAAATTCCATACAGCCTTAAT 59.161 34.615 0.00 0.00 0.00 1.40
3077 3131 5.332656 GCTTTCTTAAAGTCGCATATCGGAG 60.333 44.000 1.72 0.00 40.64 4.63
3081 3135 7.910162 TCAAATGCTTTCTTAAAGTCGCATATC 59.090 33.333 0.00 0.00 40.64 1.63
3088 3157 7.196331 ACACTGTCAAATGCTTTCTTAAAGTC 58.804 34.615 1.72 0.00 40.64 3.01
3237 3684 4.467769 AGGCAATAGAAATGAGTCCATGG 58.532 43.478 4.97 4.97 32.36 3.66
3416 3864 3.164268 TGTCCCATTTCCAAATCCACTG 58.836 45.455 0.00 0.00 0.00 3.66
3434 3882 9.358872 GTGGGAAGAAAATGAGATATTTTTGTC 57.641 33.333 0.00 0.00 32.03 3.18
3485 3933 6.557253 ACTGTATAAGACATACCCTGCCATTA 59.443 38.462 0.00 0.00 37.45 1.90
3690 4220 5.010933 TGACTAGTAAGAGGAGTTCCACAG 58.989 45.833 0.00 0.00 38.89 3.66
3695 4225 6.983984 ACAGTTTGACTAGTAAGAGGAGTTC 58.016 40.000 0.00 0.00 0.00 3.01
3708 4238 4.577283 GGCAAAACCTGTACAGTTTGACTA 59.423 41.667 29.28 0.00 36.30 2.59
3873 4405 5.813672 GTGGCATTTGTAATTGATGAAGCAT 59.186 36.000 0.00 0.00 0.00 3.79
3950 4660 8.674607 ACGGTAATTCAAGGATATTGAACTTTC 58.325 33.333 5.25 1.43 40.70 2.62
4073 4783 5.806654 AAGAGGGCAAGCAAGAAATTAAA 57.193 34.783 0.00 0.00 0.00 1.52
4164 4874 1.078955 ATATGGGCCCAGCTAGCAAT 58.921 50.000 31.97 13.45 0.00 3.56
4165 4875 1.351017 GTATATGGGCCCAGCTAGCAA 59.649 52.381 31.97 9.40 0.00 3.91
4232 4951 5.245301 GTGTATCCCACCATGCTACAGTATA 59.755 44.000 0.00 0.00 38.18 1.47
4441 5169 2.940467 TCCTGGCCCCTGCATTGA 60.940 61.111 0.00 0.00 40.13 2.57
4580 5308 5.277683 CCAAGACAAGCATATGACATAGCAC 60.278 44.000 6.97 3.09 0.00 4.40
4659 5433 0.762418 TCCCGCAGAAAGAACTGGAA 59.238 50.000 0.00 0.00 38.22 3.53
4660 5434 0.762418 TTCCCGCAGAAAGAACTGGA 59.238 50.000 0.00 0.00 38.22 3.86
4735 5512 6.588756 AGTCGCAATATCTACGTTGAAGAAAA 59.411 34.615 3.30 0.00 0.00 2.29
4891 5681 6.711194 TCCGAGTCTCTGACTATAAAGTATGG 59.289 42.308 0.00 0.00 43.53 2.74
4896 5686 5.504994 GCACTCCGAGTCTCTGACTATAAAG 60.505 48.000 0.00 0.24 43.53 1.85
5088 5889 1.851021 TTGAAATGTGCCACGGAGCG 61.851 55.000 0.00 0.00 34.65 5.03
5229 6041 7.341769 AGTGCAAGTCAGCCCATAATTTTTATA 59.658 33.333 0.00 0.00 0.00 0.98
5342 7016 6.452242 TCACATGTCACGTCTACACTAATTT 58.548 36.000 0.00 0.00 0.00 1.82
5343 7017 6.020971 TCACATGTCACGTCTACACTAATT 57.979 37.500 0.00 0.00 0.00 1.40
5345 7019 4.615223 GCTCACATGTCACGTCTACACTAA 60.615 45.833 0.00 0.00 0.00 2.24
5346 7020 3.119955 GCTCACATGTCACGTCTACACTA 60.120 47.826 0.00 0.00 0.00 2.74
5347 7021 2.351835 GCTCACATGTCACGTCTACACT 60.352 50.000 0.00 0.00 0.00 3.55
5348 7022 1.986378 GCTCACATGTCACGTCTACAC 59.014 52.381 0.00 0.00 0.00 2.90
5350 7024 2.638556 AGCTCACATGTCACGTCTAC 57.361 50.000 0.00 0.00 0.00 2.59
5351 7025 2.683362 CCTAGCTCACATGTCACGTCTA 59.317 50.000 0.00 0.00 0.00 2.59
5352 7026 1.474478 CCTAGCTCACATGTCACGTCT 59.526 52.381 0.00 0.00 0.00 4.18
5354 7028 1.257743 ACCTAGCTCACATGTCACGT 58.742 50.000 0.00 0.00 0.00 4.49
5423 7099 1.093496 GTTACATGCACGGGCCTACC 61.093 60.000 7.46 0.00 40.13 3.18
5445 7121 7.308782 AGTGAAAGTAAATCATCCGCTTAAG 57.691 36.000 0.00 0.00 0.00 1.85
5451 7127 5.551760 AGCAAGTGAAAGTAAATCATCCG 57.448 39.130 0.00 0.00 0.00 4.18
5608 7284 2.035321 GGATCTCGATCACCTCCTGTTC 59.965 54.545 8.97 0.00 39.54 3.18
5822 8636 1.138069 TGTGGAGAAGAAGACGTGCAA 59.862 47.619 0.00 0.00 0.00 4.08
5909 8723 0.114364 AAAATGTCACACCCTCCCCC 59.886 55.000 0.00 0.00 0.00 5.40
5974 8794 5.003804 GTGACCTTGGCAATTCTCTTCTTA 58.996 41.667 0.00 0.00 0.00 2.10
6019 8839 1.478837 CGGCTCTATGGGGTAGACTCA 60.479 57.143 0.00 0.00 34.50 3.41
6089 8915 1.298993 CAGTGGATGCTGGACTGCT 59.701 57.895 2.94 0.00 31.31 4.24
6146 8972 4.947147 GGCACTTGTGGGTCGGCA 62.947 66.667 2.81 0.00 0.00 5.69
6184 9010 0.178964 TGGGTTTGCTCCTTCTTGGG 60.179 55.000 0.00 0.00 36.20 4.12
6328 9154 2.203139 CGTTGGTGGTGGCACTCA 60.203 61.111 18.45 11.02 0.00 3.41
6562 9398 4.778143 GGCGTCATCGTTGGGGCT 62.778 66.667 8.75 0.00 39.49 5.19
6633 9521 4.717629 CCACCAGCTTCGTCGCGA 62.718 66.667 3.71 3.71 34.40 5.87
6638 9526 2.281070 CACTGCCACCAGCTTCGT 60.281 61.111 0.00 0.00 43.02 3.85
6750 9639 7.704789 CAAAAATTTGGACAGAGAGGAAAAG 57.295 36.000 0.00 0.00 34.59 2.27
6770 9659 0.958091 CATTGTCACGCCCTCCAAAA 59.042 50.000 0.00 0.00 0.00 2.44
6791 9680 7.395190 TTGTGCATATATGTTTTCTGCTTCT 57.605 32.000 14.14 0.00 34.02 2.85
6795 9684 5.519927 GGGTTTGTGCATATATGTTTTCTGC 59.480 40.000 14.14 0.02 0.00 4.26
6915 9805 3.096092 GTGGTGGCCTATTGGAAATTGA 58.904 45.455 3.32 0.00 34.57 2.57
6936 9826 5.506317 GGCCATCGATCTGTCCAAATAAAAG 60.506 44.000 0.00 0.00 0.00 2.27
7000 9892 5.443283 TGCTTAATGAAGATCAAGCTGGAT 58.557 37.500 2.24 2.24 43.00 3.41
7310 10206 3.494232 GTCGACTGAGACTTAGCAAGAC 58.506 50.000 8.70 0.00 38.09 3.01
7311 10207 3.833545 GTCGACTGAGACTTAGCAAGA 57.166 47.619 8.70 0.00 38.09 3.02
7321 10217 3.661944 ACGAAGTCTTAGTCGACTGAGA 58.338 45.455 30.05 30.05 43.14 3.27
7322 10218 4.407496 AACGAAGTCTTAGTCGACTGAG 57.593 45.455 26.80 26.80 45.00 3.35
7323 10219 5.468072 ACTTAACGAAGTCTTAGTCGACTGA 59.532 40.000 28.12 19.13 45.00 3.41
7324 10220 5.687828 ACTTAACGAAGTCTTAGTCGACTG 58.312 41.667 28.12 12.46 45.00 3.51
7325 10221 5.938438 ACTTAACGAAGTCTTAGTCGACT 57.062 39.130 23.66 23.66 45.00 4.18
7337 10233 3.544285 GCATCGACTGAGACTTAACGAAG 59.456 47.826 0.00 0.00 38.76 3.79
7338 10234 3.190744 AGCATCGACTGAGACTTAACGAA 59.809 43.478 0.00 0.00 33.77 3.85
7339 10235 2.747989 AGCATCGACTGAGACTTAACGA 59.252 45.455 0.00 0.00 0.00 3.85
7340 10236 3.138205 AGCATCGACTGAGACTTAACG 57.862 47.619 0.00 0.00 0.00 3.18
7341 10237 7.024768 GGATATAGCATCGACTGAGACTTAAC 58.975 42.308 0.00 0.00 0.00 2.01
7342 10238 6.715264 TGGATATAGCATCGACTGAGACTTAA 59.285 38.462 0.00 0.00 0.00 1.85
7343 10239 6.238648 TGGATATAGCATCGACTGAGACTTA 58.761 40.000 0.00 0.00 0.00 2.24
7344 10240 5.073428 TGGATATAGCATCGACTGAGACTT 58.927 41.667 0.00 0.00 0.00 3.01
7345 10241 4.657013 TGGATATAGCATCGACTGAGACT 58.343 43.478 0.00 0.00 0.00 3.24
7346 10242 5.124617 TCATGGATATAGCATCGACTGAGAC 59.875 44.000 0.00 0.00 0.00 3.36
7347 10243 5.256474 TCATGGATATAGCATCGACTGAGA 58.744 41.667 0.00 0.00 0.00 3.27
7348 10244 5.356470 TCTCATGGATATAGCATCGACTGAG 59.644 44.000 0.00 0.00 0.00 3.35
7349 10245 5.256474 TCTCATGGATATAGCATCGACTGA 58.744 41.667 0.00 0.00 0.00 3.41
7350 10246 5.573337 TCTCATGGATATAGCATCGACTG 57.427 43.478 0.00 0.00 0.00 3.51
7351 10247 6.788598 AATCTCATGGATATAGCATCGACT 57.211 37.500 0.00 0.00 33.71 4.18
7352 10248 7.840342 AAAATCTCATGGATATAGCATCGAC 57.160 36.000 0.00 0.00 33.71 4.20
7353 10249 8.531146 TGTAAAATCTCATGGATATAGCATCGA 58.469 33.333 0.00 0.00 33.71 3.59
7354 10250 8.707938 TGTAAAATCTCATGGATATAGCATCG 57.292 34.615 0.00 0.00 33.71 3.84
7362 10258 9.730705 GGATCTCAATGTAAAATCTCATGGATA 57.269 33.333 0.00 0.00 33.71 2.59
7363 10259 7.389884 CGGATCTCAATGTAAAATCTCATGGAT 59.610 37.037 0.00 0.00 35.97 3.41
7364 10260 6.707608 CGGATCTCAATGTAAAATCTCATGGA 59.292 38.462 0.00 0.00 0.00 3.41
7365 10261 6.484643 ACGGATCTCAATGTAAAATCTCATGG 59.515 38.462 0.00 0.00 0.00 3.66
7366 10262 7.350467 CACGGATCTCAATGTAAAATCTCATG 58.650 38.462 0.00 0.00 0.00 3.07
7367 10263 6.017605 GCACGGATCTCAATGTAAAATCTCAT 60.018 38.462 0.00 0.00 0.00 2.90
7368 10264 5.294306 GCACGGATCTCAATGTAAAATCTCA 59.706 40.000 0.00 0.00 0.00 3.27
7369 10265 5.294306 TGCACGGATCTCAATGTAAAATCTC 59.706 40.000 0.00 0.00 0.00 2.75
7370 10266 5.185454 TGCACGGATCTCAATGTAAAATCT 58.815 37.500 0.00 0.00 0.00 2.40
7371 10267 5.484173 TGCACGGATCTCAATGTAAAATC 57.516 39.130 0.00 0.00 0.00 2.17
7372 10268 5.895636 TTGCACGGATCTCAATGTAAAAT 57.104 34.783 0.00 0.00 0.00 1.82
7373 10269 5.697473 TTTGCACGGATCTCAATGTAAAA 57.303 34.783 0.00 0.00 0.00 1.52
7374 10270 5.697473 TTTTGCACGGATCTCAATGTAAA 57.303 34.783 0.00 0.00 0.00 2.01
7375 10271 5.895636 ATTTTGCACGGATCTCAATGTAA 57.104 34.783 0.00 0.00 0.00 2.41
7376 10272 5.895636 AATTTTGCACGGATCTCAATGTA 57.104 34.783 0.00 0.00 0.00 2.29
7377 10273 4.789012 AATTTTGCACGGATCTCAATGT 57.211 36.364 0.00 0.00 0.00 2.71
7378 10274 5.865552 AGAAAATTTTGCACGGATCTCAATG 59.134 36.000 8.47 0.00 0.00 2.82
7379 10275 6.029346 AGAAAATTTTGCACGGATCTCAAT 57.971 33.333 8.47 0.00 0.00 2.57
7380 10276 5.452078 AGAAAATTTTGCACGGATCTCAA 57.548 34.783 8.47 0.00 0.00 3.02
7381 10277 5.452078 AAGAAAATTTTGCACGGATCTCA 57.548 34.783 8.47 0.00 0.00 3.27
7382 10278 6.420604 TGAAAAGAAAATTTTGCACGGATCTC 59.579 34.615 8.47 0.00 0.00 2.75
7383 10279 6.279882 TGAAAAGAAAATTTTGCACGGATCT 58.720 32.000 8.47 0.00 0.00 2.75
7384 10280 6.200854 ACTGAAAAGAAAATTTTGCACGGATC 59.799 34.615 8.47 0.00 0.00 3.36
7385 10281 6.048509 ACTGAAAAGAAAATTTTGCACGGAT 58.951 32.000 8.47 0.00 0.00 4.18
7386 10282 5.415221 ACTGAAAAGAAAATTTTGCACGGA 58.585 33.333 8.47 0.00 0.00 4.69
7387 10283 5.717038 ACTGAAAAGAAAATTTTGCACGG 57.283 34.783 8.47 3.40 0.00 4.94
7388 10284 8.433585 AAAAACTGAAAAGAAAATTTTGCACG 57.566 26.923 8.47 0.00 0.00 5.34
7389 10285 8.849490 GGAAAAACTGAAAAGAAAATTTTGCAC 58.151 29.630 8.47 0.00 30.30 4.57
7390 10286 8.791675 AGGAAAAACTGAAAAGAAAATTTTGCA 58.208 25.926 8.47 0.00 31.67 4.08
7391 10287 9.624697 AAGGAAAAACTGAAAAGAAAATTTTGC 57.375 25.926 8.47 0.42 0.00 3.68
7398 10294 9.214957 GGAGAAAAAGGAAAAACTGAAAAGAAA 57.785 29.630 0.00 0.00 0.00 2.52
7399 10295 8.593679 AGGAGAAAAAGGAAAAACTGAAAAGAA 58.406 29.630 0.00 0.00 0.00 2.52
7400 10296 8.134202 AGGAGAAAAAGGAAAAACTGAAAAGA 57.866 30.769 0.00 0.00 0.00 2.52
7401 10297 8.659491 CAAGGAGAAAAAGGAAAAACTGAAAAG 58.341 33.333 0.00 0.00 0.00 2.27
7402 10298 7.119116 GCAAGGAGAAAAAGGAAAAACTGAAAA 59.881 33.333 0.00 0.00 0.00 2.29
7403 10299 6.593770 GCAAGGAGAAAAAGGAAAAACTGAAA 59.406 34.615 0.00 0.00 0.00 2.69
7404 10300 6.106003 GCAAGGAGAAAAAGGAAAAACTGAA 58.894 36.000 0.00 0.00 0.00 3.02
7405 10301 5.186797 TGCAAGGAGAAAAAGGAAAAACTGA 59.813 36.000 0.00 0.00 0.00 3.41
7406 10302 5.418676 TGCAAGGAGAAAAAGGAAAAACTG 58.581 37.500 0.00 0.00 0.00 3.16
7407 10303 5.675684 TGCAAGGAGAAAAAGGAAAAACT 57.324 34.783 0.00 0.00 0.00 2.66
7408 10304 5.817296 ACATGCAAGGAGAAAAAGGAAAAAC 59.183 36.000 0.00 0.00 0.00 2.43
7409 10305 5.988287 ACATGCAAGGAGAAAAAGGAAAAA 58.012 33.333 0.00 0.00 0.00 1.94
7410 10306 5.612725 ACATGCAAGGAGAAAAAGGAAAA 57.387 34.783 0.00 0.00 0.00 2.29
7411 10307 5.612725 AACATGCAAGGAGAAAAAGGAAA 57.387 34.783 0.00 0.00 0.00 3.13
7412 10308 6.916360 ATAACATGCAAGGAGAAAAAGGAA 57.084 33.333 0.00 0.00 0.00 3.36
7413 10309 7.833682 TGATATAACATGCAAGGAGAAAAAGGA 59.166 33.333 0.00 0.00 0.00 3.36
7414 10310 7.917505 GTGATATAACATGCAAGGAGAAAAAGG 59.082 37.037 0.00 0.00 0.00 3.11
7415 10311 8.680903 AGTGATATAACATGCAAGGAGAAAAAG 58.319 33.333 0.00 0.00 0.00 2.27
7416 10312 8.579850 AGTGATATAACATGCAAGGAGAAAAA 57.420 30.769 0.00 0.00 0.00 1.94
7417 10313 8.461222 CAAGTGATATAACATGCAAGGAGAAAA 58.539 33.333 0.00 0.00 0.00 2.29
7418 10314 7.828717 TCAAGTGATATAACATGCAAGGAGAAA 59.171 33.333 0.00 0.00 0.00 2.52
7419 10315 7.280876 GTCAAGTGATATAACATGCAAGGAGAA 59.719 37.037 0.00 0.00 0.00 2.87
7420 10316 6.763135 GTCAAGTGATATAACATGCAAGGAGA 59.237 38.462 0.00 0.00 0.00 3.71
7421 10317 6.765036 AGTCAAGTGATATAACATGCAAGGAG 59.235 38.462 0.00 0.00 0.00 3.69
7422 10318 6.653020 AGTCAAGTGATATAACATGCAAGGA 58.347 36.000 0.00 0.00 0.00 3.36
7423 10319 6.932356 AGTCAAGTGATATAACATGCAAGG 57.068 37.500 0.00 0.00 0.00 3.61
7424 10320 9.317936 TCTAAGTCAAGTGATATAACATGCAAG 57.682 33.333 0.00 0.00 0.00 4.01
7425 10321 9.098355 GTCTAAGTCAAGTGATATAACATGCAA 57.902 33.333 0.00 0.00 0.00 4.08
7426 10322 8.478066 AGTCTAAGTCAAGTGATATAACATGCA 58.522 33.333 0.00 0.00 0.00 3.96
7427 10323 8.879342 AGTCTAAGTCAAGTGATATAACATGC 57.121 34.615 0.00 0.00 0.00 4.06
7429 10325 9.823647 CCAAGTCTAAGTCAAGTGATATAACAT 57.176 33.333 0.00 0.00 0.00 2.71
7430 10326 8.812972 ACCAAGTCTAAGTCAAGTGATATAACA 58.187 33.333 0.00 0.00 0.00 2.41
7431 10327 9.654663 AACCAAGTCTAAGTCAAGTGATATAAC 57.345 33.333 0.00 0.00 0.00 1.89
7442 10338 9.871238 GACTGATATTTAACCAAGTCTAAGTCA 57.129 33.333 0.00 0.00 0.00 3.41
7443 10339 9.021863 CGACTGATATTTAACCAAGTCTAAGTC 57.978 37.037 0.00 0.00 0.00 3.01
7444 10340 8.746530 TCGACTGATATTTAACCAAGTCTAAGT 58.253 33.333 0.00 0.00 0.00 2.24
7445 10341 9.021863 GTCGACTGATATTTAACCAAGTCTAAG 57.978 37.037 8.70 0.00 0.00 2.18
7446 10342 8.746530 AGTCGACTGATATTTAACCAAGTCTAA 58.253 33.333 19.30 0.00 0.00 2.10
7447 10343 8.188799 CAGTCGACTGATATTTAACCAAGTCTA 58.811 37.037 36.73 0.00 46.59 2.59
7448 10344 7.036220 CAGTCGACTGATATTTAACCAAGTCT 58.964 38.462 36.73 0.00 46.59 3.24
7449 10345 7.223058 CAGTCGACTGATATTTAACCAAGTC 57.777 40.000 36.73 0.00 46.59 3.01
7464 10360 9.516314 TGTTTTGTATTATATCTCAGTCGACTG 57.484 33.333 34.76 34.76 45.08 3.51
7569 10494 4.014569 TGCAGCAGGTGATTACTAAACA 57.985 40.909 3.02 0.00 0.00 2.83
7620 10545 1.305549 GGGACGGAGGGAGTACCAA 60.306 63.158 0.00 0.00 42.20 3.67
7622 10547 0.906282 TTTGGGACGGAGGGAGTACC 60.906 60.000 0.00 0.00 42.94 3.34
7623 10548 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
7624 10549 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
7625 10550 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
7626 10551 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
7627 10552 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
7628 10553 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
7629 10554 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
7630 10555 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
7631 10556 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
7632 10557 3.305335 CCAAGACAAGAATTTTGGGACGG 60.305 47.826 0.00 0.00 37.11 4.79
7633 10558 3.568007 TCCAAGACAAGAATTTTGGGACG 59.432 43.478 4.84 0.00 40.33 4.79
7634 10559 5.728637 ATCCAAGACAAGAATTTTGGGAC 57.271 39.130 4.84 0.00 40.33 4.46
7635 10560 6.099557 ACAAATCCAAGACAAGAATTTTGGGA 59.900 34.615 4.84 0.00 40.33 4.37
7636 10561 6.290605 ACAAATCCAAGACAAGAATTTTGGG 58.709 36.000 4.84 0.00 40.33 4.12
7637 10562 7.212274 AGACAAATCCAAGACAAGAATTTTGG 58.788 34.615 0.00 0.00 41.09 3.28
7638 10563 9.748708 TTAGACAAATCCAAGACAAGAATTTTG 57.251 29.630 0.00 0.00 0.00 2.44
7643 10568 8.717821 CGTATTTAGACAAATCCAAGACAAGAA 58.282 33.333 0.00 0.00 35.88 2.52
7644 10569 7.333423 CCGTATTTAGACAAATCCAAGACAAGA 59.667 37.037 0.00 0.00 35.88 3.02
7645 10570 7.333423 TCCGTATTTAGACAAATCCAAGACAAG 59.667 37.037 0.00 0.00 35.88 3.16
7646 10571 7.162761 TCCGTATTTAGACAAATCCAAGACAA 58.837 34.615 0.00 0.00 35.88 3.18
7647 10572 6.703319 TCCGTATTTAGACAAATCCAAGACA 58.297 36.000 0.00 0.00 35.88 3.41
7648 10573 7.280205 ACATCCGTATTTAGACAAATCCAAGAC 59.720 37.037 0.00 0.00 35.88 3.01
7649 10574 7.335627 ACATCCGTATTTAGACAAATCCAAGA 58.664 34.615 0.00 0.00 35.88 3.02
7650 10575 7.553881 ACATCCGTATTTAGACAAATCCAAG 57.446 36.000 0.00 0.00 35.88 3.61
7651 10576 9.268268 GATACATCCGTATTTAGACAAATCCAA 57.732 33.333 0.00 0.00 38.48 3.53
7652 10577 8.425703 TGATACATCCGTATTTAGACAAATCCA 58.574 33.333 0.00 0.00 38.48 3.41
7653 10578 8.827177 TGATACATCCGTATTTAGACAAATCC 57.173 34.615 0.00 0.00 38.48 3.01
7655 10580 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
7656 10581 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
7657 10582 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
7658 10583 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
7659 10584 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
7660 10585 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
7661 10586 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
7662 10587 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
7663 10588 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
7664 10589 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
7665 10590 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
7666 10591 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
7667 10592 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
7668 10593 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
7669 10594 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
7679 10604 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
7680 10605 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
7681 10606 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
7682 10607 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
7699 10624 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
7700 10625 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
7701 10626 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
7702 10627 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
7703 10628 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
7704 10629 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
7712 10637 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
7713 10638 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
7714 10639 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
7715 10640 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
7716 10641 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
7717 10642 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
7718 10643 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
7719 10644 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
7720 10645 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
7721 10646 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
7722 10647 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
7723 10648 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
7724 10649 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
7725 10650 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
7726 10651 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
7727 10652 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
7728 10653 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
7729 10654 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
7730 10655 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
7731 10656 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
7732 10657 1.557832 CATACTCCCTCCGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
7733 10658 1.200519 CATACTCCCTCCGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
7734 10659 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
7735 10660 0.686441 CACATACTCCCTCCGTCCCA 60.686 60.000 0.00 0.00 0.00 4.37
7736 10661 2.029307 GCACATACTCCCTCCGTCCC 62.029 65.000 0.00 0.00 0.00 4.46
7737 10662 1.442148 GCACATACTCCCTCCGTCC 59.558 63.158 0.00 0.00 0.00 4.79
7738 10663 1.327690 TGGCACATACTCCCTCCGTC 61.328 60.000 0.00 0.00 0.00 4.79
7739 10664 0.907704 TTGGCACATACTCCCTCCGT 60.908 55.000 0.00 0.00 39.30 4.69
7740 10665 0.179073 CTTGGCACATACTCCCTCCG 60.179 60.000 0.00 0.00 39.30 4.63
7741 10666 1.139853 CTCTTGGCACATACTCCCTCC 59.860 57.143 0.00 0.00 39.30 4.30
7743 10668 0.543749 GCTCTTGGCACATACTCCCT 59.456 55.000 0.00 0.00 39.30 4.20
7747 10672 2.168106 CAGAGAGCTCTTGGCACATACT 59.832 50.000 19.36 3.68 44.79 2.12
7822 10748 9.451002 GTATAGTCCATGTTCTCAGCTATAGTA 57.549 37.037 0.84 0.00 0.00 1.82
7867 10793 8.537049 TCAACATTTGCATATTCCAAGAAAAG 57.463 30.769 0.00 0.00 0.00 2.27
8075 11017 2.025887 AGGCTCCACCCAACAATCTAAG 60.026 50.000 0.00 0.00 40.58 2.18
8118 11060 7.404671 TTGCACAGAATATAGAGTGTAGTGA 57.595 36.000 0.00 0.00 34.59 3.41
8172 11114 2.794103 ACTCCTGCATGCACAACATTA 58.206 42.857 18.46 0.00 36.64 1.90
8574 11522 4.075682 TGACAATGGAGCGGTAAAATTGA 58.924 39.130 17.98 0.72 33.47 2.57
8652 11601 1.243342 TTCCGCACCCAATTCAGCAG 61.243 55.000 0.00 0.00 0.00 4.24
8815 11764 5.364778 GGAAACAAACAATTAACTGGCCTT 58.635 37.500 3.32 0.00 0.00 4.35
8822 11771 5.815222 AGCAACAGGGAAACAAACAATTAAC 59.185 36.000 0.00 0.00 0.00 2.01
9298 12247 6.488683 TGACAGATAAACCACCCAAAAACTAG 59.511 38.462 0.00 0.00 0.00 2.57
9334 12286 2.162681 GTTTTACCACATCTGCAGGCT 58.837 47.619 15.13 0.00 0.00 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.