Multiple sequence alignment - TraesCS4B01G121400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G121400 chr4B 100.000 6572 0 0 1 6572 143305557 143312128 0.000000e+00 12137.0
1 TraesCS4B01G121400 chr4B 95.122 123 6 0 120 242 655017450 655017572 1.870000e-45 195.0
2 TraesCS4B01G121400 chr4A 96.188 3410 72 22 839 4239 475423877 475420517 0.000000e+00 5524.0
3 TraesCS4B01G121400 chr4A 95.129 1088 36 5 4512 5589 475419613 475418533 0.000000e+00 1700.0
4 TraesCS4B01G121400 chr4A 86.944 1034 72 18 5574 6572 475414502 475413497 0.000000e+00 1103.0
5 TraesCS4B01G121400 chr4A 96.341 82 3 0 4329 4410 475419684 475419603 1.150000e-27 135.0
6 TraesCS4B01G121400 chr4A 94.444 36 1 1 4297 4332 475419751 475419717 3.000000e-03 54.7
7 TraesCS4B01G121400 chr4D 97.447 2507 43 10 1825 4329 100796267 100798754 0.000000e+00 4255.0
8 TraesCS4B01G121400 chr4D 90.732 2104 102 30 4512 6572 100798861 100800914 0.000000e+00 2719.0
9 TraesCS4B01G121400 chr4D 96.538 1011 23 8 822 1822 100795177 100796185 0.000000e+00 1663.0
10 TraesCS4B01G121400 chr4D 96.648 179 4 2 4062 4239 482703453 482703630 4.980000e-76 296.0
11 TraesCS4B01G121400 chr4D 94.944 178 8 1 4062 4238 65536120 65536297 1.800000e-70 278.0
12 TraesCS4B01G121400 chr4D 95.122 123 6 0 120 242 127152874 127152996 1.870000e-45 195.0
13 TraesCS4B01G121400 chr4D 94.318 88 5 0 4323 4410 100798784 100798871 1.150000e-27 135.0
14 TraesCS4B01G121400 chr6A 82.163 1581 229 35 2057 3613 592808286 592809837 0.000000e+00 1308.0
15 TraesCS4B01G121400 chr6A 85.824 261 32 5 3678 3938 592809863 592810118 8.400000e-69 272.0
16 TraesCS4B01G121400 chr6D 84.490 1225 172 11 2057 3278 446129494 446128285 0.000000e+00 1194.0
17 TraesCS4B01G121400 chr6D 86.312 263 30 6 3689 3950 446127913 446127656 1.400000e-71 281.0
18 TraesCS4B01G121400 chr6D 82.298 322 43 12 1045 1354 446130874 446130555 3.910000e-67 267.0
19 TraesCS4B01G121400 chr6D 98.305 118 2 0 4409 4526 329858710 329858593 2.400000e-49 207.0
20 TraesCS4B01G121400 chr6D 97.403 77 2 0 3454 3530 446128069 446127993 1.490000e-26 132.0
21 TraesCS4B01G121400 chr3D 87.960 598 67 4 239 836 427151170 427151762 0.000000e+00 701.0
22 TraesCS4B01G121400 chr3D 96.512 172 5 1 4062 4232 422517622 422517793 3.880000e-72 283.0
23 TraesCS4B01G121400 chr2A 87.124 598 69 7 240 837 459548960 459549549 0.000000e+00 671.0
24 TraesCS4B01G121400 chr3A 86.644 599 73 5 239 837 559604134 559603543 0.000000e+00 656.0
25 TraesCS4B01G121400 chr3A 81.699 153 23 4 3464 3613 16217012 16217162 8.950000e-24 122.0
26 TraesCS4B01G121400 chr3B 86.167 600 75 6 239 838 244977897 244977306 5.560000e-180 641.0
27 TraesCS4B01G121400 chr3B 85.548 602 82 4 237 838 753267960 753267364 5.600000e-175 625.0
28 TraesCS4B01G121400 chr3B 99.145 117 1 0 4409 4525 457968682 457968798 1.860000e-50 211.0
29 TraesCS4B01G121400 chr3B 96.721 122 4 0 4404 4525 238502555 238502676 3.110000e-48 204.0
30 TraesCS4B01G121400 chr3B 95.349 129 4 2 4409 4537 805003450 805003324 3.110000e-48 204.0
31 TraesCS4B01G121400 chr3B 95.968 124 5 0 2 125 526418261 526418384 1.120000e-47 202.0
32 TraesCS4B01G121400 chr3B 96.610 118 4 0 2 119 95419319 95419436 5.200000e-46 196.0
33 TraesCS4B01G121400 chr3B 96.610 118 4 0 2 119 125749240 125749123 5.200000e-46 196.0
34 TraesCS4B01G121400 chr3B 94.531 128 6 1 4408 4535 162089415 162089541 5.200000e-46 196.0
35 TraesCS4B01G121400 chr3B 94.355 124 7 0 119 242 730820354 730820477 2.420000e-44 191.0
36 TraesCS4B01G121400 chr3B 90.278 144 11 3 120 261 615729256 615729114 1.130000e-42 185.0
37 TraesCS4B01G121400 chr2D 85.927 604 77 7 239 841 575827709 575827113 7.190000e-179 638.0
38 TraesCS4B01G121400 chr2D 98.305 118 2 0 4409 4526 305940255 305940138 2.400000e-49 207.0
39 TraesCS4B01G121400 chr2D 86.170 188 26 0 55 242 489598254 489598067 3.110000e-48 204.0
40 TraesCS4B01G121400 chr1B 86.426 582 72 7 257 837 114438944 114438369 1.200000e-176 630.0
41 TraesCS4B01G121400 chr1B 99.145 117 1 0 4409 4525 156585598 156585482 1.860000e-50 211.0
42 TraesCS4B01G121400 chr1B 89.262 149 10 5 117 260 600979979 600980126 1.460000e-41 182.0
43 TraesCS4B01G121400 chr7A 85.502 607 75 6 239 841 634327884 634327287 7.240000e-174 621.0
44 TraesCS4B01G121400 chr7A 97.126 174 4 1 4062 4234 83785006 83784833 6.450000e-75 292.0
45 TraesCS4B01G121400 chr5B 85.526 608 71 10 237 839 559164708 559165303 2.600000e-173 619.0
46 TraesCS4B01G121400 chr5B 97.688 173 3 1 4062 4233 574956617 574956445 4.980000e-76 296.0
47 TraesCS4B01G121400 chr5B 98.291 117 2 0 2 118 570960839 570960723 8.640000e-49 206.0
48 TraesCS4B01G121400 chr5B 97.479 119 2 1 1 119 529061079 529061196 1.120000e-47 202.0
49 TraesCS4B01G121400 chr5B 97.458 118 3 0 2 119 583582824 583582941 1.120000e-47 202.0
50 TraesCS4B01G121400 chr5B 95.122 123 6 0 120 242 516478189 516478067 1.870000e-45 195.0
51 TraesCS4B01G121400 chr5B 94.355 124 7 0 120 243 9668535 9668412 2.420000e-44 191.0
52 TraesCS4B01G121400 chr5B 87.500 80 10 0 3464 3543 100177259 100177338 7.020000e-15 93.5
53 TraesCS4B01G121400 chr6B 95.000 180 6 3 4062 4239 720714623 720714445 5.020000e-71 279.0
54 TraesCS4B01G121400 chr2B 93.048 187 11 2 4062 4247 121669524 121669709 8.400000e-69 272.0
55 TraesCS4B01G121400 chr2B 95.349 129 5 1 4398 4525 3198580 3198708 3.110000e-48 204.0
56 TraesCS4B01G121400 chr2B 97.436 117 3 0 2 118 444856066 444855950 4.020000e-47 200.0
57 TraesCS4B01G121400 chr7B 97.500 120 3 0 4406 4525 517095070 517095189 8.640000e-49 206.0
58 TraesCS4B01G121400 chr7B 94.531 128 6 1 1 127 409185082 409185209 5.200000e-46 196.0
59 TraesCS4B01G121400 chr5D 95.122 123 6 0 120 242 560408675 560408553 1.870000e-45 195.0
60 TraesCS4B01G121400 chr5A 92.500 80 6 0 3464 3543 607963785 607963864 1.500000e-21 115.0
61 TraesCS4B01G121400 chr5A 91.250 80 7 0 3464 3543 493024035 493024114 6.970000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G121400 chr4B 143305557 143312128 6571 False 12137.000 12137 100.00000 1 6572 1 chr4B.!!$F1 6571
1 TraesCS4B01G121400 chr4A 475418533 475423877 5344 True 1853.425 5524 95.52550 839 5589 4 chr4A.!!$R2 4750
2 TraesCS4B01G121400 chr4A 475413497 475414502 1005 True 1103.000 1103 86.94400 5574 6572 1 chr4A.!!$R1 998
3 TraesCS4B01G121400 chr4D 100795177 100800914 5737 False 2193.000 4255 94.75875 822 6572 4 chr4D.!!$F4 5750
4 TraesCS4B01G121400 chr6A 592808286 592810118 1832 False 790.000 1308 83.99350 2057 3938 2 chr6A.!!$F1 1881
5 TraesCS4B01G121400 chr6D 446127656 446130874 3218 True 468.500 1194 87.62575 1045 3950 4 chr6D.!!$R2 2905
6 TraesCS4B01G121400 chr3D 427151170 427151762 592 False 701.000 701 87.96000 239 836 1 chr3D.!!$F2 597
7 TraesCS4B01G121400 chr2A 459548960 459549549 589 False 671.000 671 87.12400 240 837 1 chr2A.!!$F1 597
8 TraesCS4B01G121400 chr3A 559603543 559604134 591 True 656.000 656 86.64400 239 837 1 chr3A.!!$R1 598
9 TraesCS4B01G121400 chr3B 244977306 244977897 591 True 641.000 641 86.16700 239 838 1 chr3B.!!$R2 599
10 TraesCS4B01G121400 chr3B 753267364 753267960 596 True 625.000 625 85.54800 237 838 1 chr3B.!!$R4 601
11 TraesCS4B01G121400 chr2D 575827113 575827709 596 True 638.000 638 85.92700 239 841 1 chr2D.!!$R3 602
12 TraesCS4B01G121400 chr1B 114438369 114438944 575 True 630.000 630 86.42600 257 837 1 chr1B.!!$R1 580
13 TraesCS4B01G121400 chr7A 634327287 634327884 597 True 621.000 621 85.50200 239 841 1 chr7A.!!$R2 602
14 TraesCS4B01G121400 chr5B 559164708 559165303 595 False 619.000 619 85.52600 237 839 1 chr5B.!!$F3 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.105142 TCAGGCCTATGACCCTACCC 60.105 60.000 3.98 0.00 0.00 3.69 F
174 175 0.234625 GTTGCGATGACGTTTGCTCA 59.765 50.000 1.36 0.00 41.98 4.26 F
223 224 0.463295 CAGGAGCGGATGCAGATTGT 60.463 55.000 0.00 0.00 46.23 2.71 F
224 225 0.463295 AGGAGCGGATGCAGATTGTG 60.463 55.000 0.00 0.00 46.23 3.33 F
1714 2463 0.104671 GCTTCTGTTTGGGCTTTGCA 59.895 50.000 0.00 0.00 0.00 4.08 F
1820 2576 1.729586 TGGCAGAGAACAACCTACCT 58.270 50.000 0.00 0.00 0.00 3.08 F
1821 2577 2.897350 TGGCAGAGAACAACCTACCTA 58.103 47.619 0.00 0.00 0.00 3.08 F
3081 3920 3.016736 CCAGGTTGTTCCATGGTATGTC 58.983 50.000 12.58 1.24 39.02 3.06 F
4068 4962 2.238521 GTTGGATCTGAAACCTTGGCA 58.761 47.619 0.00 0.00 0.00 4.92 F
4424 6063 0.115745 AGGTACTCCCTCCGTTTGGA 59.884 55.000 0.00 0.00 40.71 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1354 1376 1.876473 AGAAGAGGGATCTATGGGGGT 59.124 52.381 0.00 0.0 0.00 4.95 R
1393 1415 2.848678 ACCATAGGACAGCAGGTAGA 57.151 50.000 0.00 0.0 0.00 2.59 R
1421 1443 3.830755 TCCCTAATTACACGAGCTATCCC 59.169 47.826 0.00 0.0 0.00 3.85 R
1782 2538 5.448654 TGCCAAGTGCTTTATAATCCTGAT 58.551 37.500 0.00 0.0 42.00 2.90 R
3347 4199 0.178990 AACAAGTGGAGGCTTGACCC 60.179 55.000 12.05 0.0 46.34 4.46 R
3355 4207 0.954452 GGTCAAGCAACAAGTGGAGG 59.046 55.000 0.00 0.0 0.00 4.30 R
3358 4210 1.008538 GCGGTCAAGCAACAAGTGG 60.009 57.895 0.00 0.0 37.05 4.00 R
4246 5141 0.035317 CAGAACAGCACCACCAGCTA 59.965 55.000 0.00 0.0 41.14 3.32 R
5443 7097 0.819259 GGTGTCAAGCTGCAACTGGA 60.819 55.000 1.02 0.0 0.00 3.86 R
6416 8099 0.390472 GGACACAGAAAGGGAGCTCG 60.390 60.000 7.83 0.0 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.939460 AACGCATTTATTGGGCACTC 57.061 45.000 0.00 0.00 41.83 3.51
20 21 1.102978 ACGCATTTATTGGGCACTCC 58.897 50.000 0.00 0.00 41.83 3.85
21 22 1.340991 ACGCATTTATTGGGCACTCCT 60.341 47.619 0.00 0.00 41.83 3.69
22 23 1.750778 CGCATTTATTGGGCACTCCTT 59.249 47.619 0.00 0.00 36.20 3.36
23 24 2.480073 CGCATTTATTGGGCACTCCTTG 60.480 50.000 0.00 0.00 36.20 3.61
24 25 2.497273 GCATTTATTGGGCACTCCTTGT 59.503 45.455 0.00 0.00 36.20 3.16
25 26 3.055891 GCATTTATTGGGCACTCCTTGTT 60.056 43.478 0.00 0.00 36.20 2.83
26 27 4.497300 CATTTATTGGGCACTCCTTGTTG 58.503 43.478 0.00 0.00 36.20 3.33
27 28 2.969821 TATTGGGCACTCCTTGTTGT 57.030 45.000 0.00 0.00 36.20 3.32
28 29 1.620822 ATTGGGCACTCCTTGTTGTC 58.379 50.000 0.00 0.00 36.20 3.18
29 30 0.550914 TTGGGCACTCCTTGTTGTCT 59.449 50.000 0.00 0.00 36.20 3.41
30 31 0.108585 TGGGCACTCCTTGTTGTCTC 59.891 55.000 0.00 0.00 36.20 3.36
31 32 0.951040 GGGCACTCCTTGTTGTCTCG 60.951 60.000 0.00 0.00 0.00 4.04
32 33 0.249911 GGCACTCCTTGTTGTCTCGT 60.250 55.000 0.00 0.00 0.00 4.18
33 34 0.861837 GCACTCCTTGTTGTCTCGTG 59.138 55.000 0.00 0.00 0.00 4.35
34 35 1.538204 GCACTCCTTGTTGTCTCGTGA 60.538 52.381 0.00 0.00 0.00 4.35
35 36 2.398498 CACTCCTTGTTGTCTCGTGAG 58.602 52.381 0.00 0.00 0.00 3.51
36 37 1.269831 ACTCCTTGTTGTCTCGTGAGC 60.270 52.381 0.00 0.00 0.00 4.26
37 38 1.000283 CTCCTTGTTGTCTCGTGAGCT 60.000 52.381 0.00 0.00 0.00 4.09
38 39 1.412710 TCCTTGTTGTCTCGTGAGCTT 59.587 47.619 0.00 0.00 0.00 3.74
39 40 1.795286 CCTTGTTGTCTCGTGAGCTTC 59.205 52.381 0.00 0.00 0.00 3.86
40 41 2.546795 CCTTGTTGTCTCGTGAGCTTCT 60.547 50.000 0.00 0.00 0.00 2.85
41 42 2.890808 TGTTGTCTCGTGAGCTTCTT 57.109 45.000 0.00 0.00 0.00 2.52
42 43 3.179443 TGTTGTCTCGTGAGCTTCTTT 57.821 42.857 0.00 0.00 0.00 2.52
43 44 2.866156 TGTTGTCTCGTGAGCTTCTTTG 59.134 45.455 0.00 0.00 0.00 2.77
44 45 1.502231 TGTCTCGTGAGCTTCTTTGC 58.498 50.000 0.00 0.00 0.00 3.68
46 47 2.139118 GTCTCGTGAGCTTCTTTGCTT 58.861 47.619 0.00 0.00 44.17 3.91
47 48 2.156697 GTCTCGTGAGCTTCTTTGCTTC 59.843 50.000 0.00 0.00 44.17 3.86
48 49 2.036475 TCTCGTGAGCTTCTTTGCTTCT 59.964 45.455 0.00 0.00 44.17 2.85
49 50 3.255888 TCTCGTGAGCTTCTTTGCTTCTA 59.744 43.478 0.00 0.00 44.17 2.10
50 51 3.579709 TCGTGAGCTTCTTTGCTTCTAG 58.420 45.455 0.00 0.00 44.17 2.43
51 52 2.670414 CGTGAGCTTCTTTGCTTCTAGG 59.330 50.000 0.00 0.00 44.17 3.02
52 53 3.006247 GTGAGCTTCTTTGCTTCTAGGG 58.994 50.000 0.00 0.00 44.17 3.53
53 54 2.639839 TGAGCTTCTTTGCTTCTAGGGT 59.360 45.455 0.00 0.00 44.17 4.34
54 55 3.838317 TGAGCTTCTTTGCTTCTAGGGTA 59.162 43.478 0.00 0.00 44.17 3.69
55 56 4.081420 TGAGCTTCTTTGCTTCTAGGGTAG 60.081 45.833 0.00 0.00 44.17 3.18
56 57 3.841255 AGCTTCTTTGCTTCTAGGGTAGT 59.159 43.478 0.00 0.00 40.93 2.73
57 58 3.935828 GCTTCTTTGCTTCTAGGGTAGTG 59.064 47.826 0.00 0.00 0.00 2.74
58 59 4.322801 GCTTCTTTGCTTCTAGGGTAGTGA 60.323 45.833 0.00 0.00 0.00 3.41
59 60 4.803098 TCTTTGCTTCTAGGGTAGTGAC 57.197 45.455 0.00 0.00 0.00 3.67
60 61 3.514309 TCTTTGCTTCTAGGGTAGTGACC 59.486 47.826 0.00 0.00 46.13 4.02
61 62 2.921834 TGCTTCTAGGGTAGTGACCT 57.078 50.000 0.00 0.00 46.09 3.85
62 63 3.185880 TGCTTCTAGGGTAGTGACCTT 57.814 47.619 0.00 0.00 46.09 3.50
63 64 2.832129 TGCTTCTAGGGTAGTGACCTTG 59.168 50.000 0.00 0.00 46.09 3.61
64 65 2.168728 GCTTCTAGGGTAGTGACCTTGG 59.831 54.545 0.00 0.00 46.09 3.61
65 66 2.544844 TCTAGGGTAGTGACCTTGGG 57.455 55.000 0.00 0.00 46.09 4.12
66 67 1.720533 TCTAGGGTAGTGACCTTGGGT 59.279 52.381 0.00 0.00 46.09 4.51
67 68 2.928364 TCTAGGGTAGTGACCTTGGGTA 59.072 50.000 0.00 0.00 46.09 3.69
68 69 2.249309 AGGGTAGTGACCTTGGGTAG 57.751 55.000 0.00 0.00 46.09 3.18
81 82 3.559069 CTTGGGTAGGACGTATAGGTCA 58.441 50.000 23.12 4.96 38.70 4.02
82 83 3.219176 TGGGTAGGACGTATAGGTCAG 57.781 52.381 23.12 0.00 38.70 3.51
83 84 2.158564 TGGGTAGGACGTATAGGTCAGG 60.159 54.545 23.12 0.00 38.70 3.86
84 85 1.885233 GGTAGGACGTATAGGTCAGGC 59.115 57.143 23.12 13.30 38.70 4.85
85 86 1.885233 GTAGGACGTATAGGTCAGGCC 59.115 57.143 23.12 9.72 38.70 5.19
97 98 1.049402 GTCAGGCCTATGACCCTACC 58.951 60.000 3.98 0.00 43.12 3.18
98 99 0.105142 TCAGGCCTATGACCCTACCC 60.105 60.000 3.98 0.00 0.00 3.69
99 100 1.128188 CAGGCCTATGACCCTACCCC 61.128 65.000 3.98 0.00 0.00 4.95
100 101 1.074014 GGCCTATGACCCTACCCCA 60.074 63.158 0.00 0.00 0.00 4.96
101 102 1.128188 GGCCTATGACCCTACCCCAG 61.128 65.000 0.00 0.00 0.00 4.45
102 103 1.128188 GCCTATGACCCTACCCCAGG 61.128 65.000 0.00 0.00 45.07 4.45
103 104 0.267960 CCTATGACCCTACCCCAGGT 59.732 60.000 0.00 0.00 43.80 4.00
110 111 3.848978 ACCCTACCCCAGGTCTATATC 57.151 52.381 0.00 0.00 43.80 1.63
111 112 3.076735 ACCCTACCCCAGGTCTATATCA 58.923 50.000 0.00 0.00 43.80 2.15
112 113 3.673152 ACCCTACCCCAGGTCTATATCAT 59.327 47.826 0.00 0.00 43.80 2.45
113 114 4.264895 ACCCTACCCCAGGTCTATATCATC 60.265 50.000 0.00 0.00 43.80 2.92
114 115 4.264850 CCCTACCCCAGGTCTATATCATCA 60.265 50.000 0.00 0.00 43.80 3.07
115 116 5.533112 CCTACCCCAGGTCTATATCATCAT 58.467 45.833 0.00 0.00 39.91 2.45
116 117 5.600484 CCTACCCCAGGTCTATATCATCATC 59.400 48.000 0.00 0.00 39.91 2.92
117 118 5.028678 ACCCCAGGTCTATATCATCATCA 57.971 43.478 0.00 0.00 0.00 3.07
118 119 5.607767 ACCCCAGGTCTATATCATCATCAT 58.392 41.667 0.00 0.00 0.00 2.45
119 120 5.664908 ACCCCAGGTCTATATCATCATCATC 59.335 44.000 0.00 0.00 0.00 2.92
120 121 5.664457 CCCCAGGTCTATATCATCATCATCA 59.336 44.000 0.00 0.00 0.00 3.07
121 122 6.329460 CCCCAGGTCTATATCATCATCATCAT 59.671 42.308 0.00 0.00 0.00 2.45
122 123 7.443477 CCCAGGTCTATATCATCATCATCATC 58.557 42.308 0.00 0.00 0.00 2.92
123 124 7.443477 CCAGGTCTATATCATCATCATCATCC 58.557 42.308 0.00 0.00 0.00 3.51
124 125 7.290481 CCAGGTCTATATCATCATCATCATCCT 59.710 40.741 0.00 0.00 0.00 3.24
125 126 8.361889 CAGGTCTATATCATCATCATCATCCTC 58.638 40.741 0.00 0.00 0.00 3.71
126 127 7.231115 AGGTCTATATCATCATCATCATCCTCG 59.769 40.741 0.00 0.00 0.00 4.63
127 128 7.014134 GGTCTATATCATCATCATCATCCTCGT 59.986 40.741 0.00 0.00 0.00 4.18
128 129 7.861872 GTCTATATCATCATCATCATCCTCGTG 59.138 40.741 0.00 0.00 0.00 4.35
129 130 3.672767 TCATCATCATCATCCTCGTGG 57.327 47.619 0.00 0.00 0.00 4.94
130 131 2.967887 TCATCATCATCATCCTCGTGGT 59.032 45.455 2.99 0.00 34.23 4.16
131 132 2.896745 TCATCATCATCCTCGTGGTG 57.103 50.000 2.99 1.96 34.23 4.17
132 133 1.413812 TCATCATCATCCTCGTGGTGG 59.586 52.381 2.99 0.00 31.09 4.61
133 134 1.413812 CATCATCATCCTCGTGGTGGA 59.586 52.381 2.99 3.10 38.06 4.02
134 135 0.824109 TCATCATCCTCGTGGTGGAC 59.176 55.000 2.99 0.00 36.30 4.02
135 136 0.536724 CATCATCCTCGTGGTGGACA 59.463 55.000 2.99 0.00 36.30 4.02
136 137 1.139654 CATCATCCTCGTGGTGGACAT 59.860 52.381 2.99 0.00 36.30 3.06
137 138 0.536724 TCATCCTCGTGGTGGACATG 59.463 55.000 2.99 0.00 36.30 3.21
138 139 0.250234 CATCCTCGTGGTGGACATGT 59.750 55.000 0.00 0.00 36.30 3.21
139 140 0.250234 ATCCTCGTGGTGGACATGTG 59.750 55.000 1.15 0.00 36.30 3.21
140 141 1.118965 TCCTCGTGGTGGACATGTGT 61.119 55.000 1.15 0.00 37.38 3.72
141 142 0.670546 CCTCGTGGTGGACATGTGTC 60.671 60.000 1.15 4.58 44.04 3.67
149 150 2.982130 GACATGTGTCCTCGGGCT 59.018 61.111 1.15 0.00 39.07 5.19
150 151 1.153549 GACATGTGTCCTCGGGCTC 60.154 63.158 1.15 0.00 39.07 4.70
151 152 2.187946 CATGTGTCCTCGGGCTCC 59.812 66.667 0.00 0.00 0.00 4.70
162 163 4.814294 GGGCTCCGTCGTTGCGAT 62.814 66.667 0.00 0.00 38.42 4.58
163 164 3.554692 GGCTCCGTCGTTGCGATG 61.555 66.667 4.00 4.00 41.82 3.84
164 165 2.506217 GCTCCGTCGTTGCGATGA 60.506 61.111 11.70 0.00 44.49 2.92
165 166 2.789203 GCTCCGTCGTTGCGATGAC 61.789 63.158 15.37 15.37 44.49 3.06
170 171 2.968179 GTCGTTGCGATGACGTTTG 58.032 52.632 10.56 0.00 41.08 2.93
171 172 1.052768 GTCGTTGCGATGACGTTTGC 61.053 55.000 10.56 0.00 41.08 3.68
172 173 1.204062 CGTTGCGATGACGTTTGCT 59.796 52.632 1.36 0.00 41.98 3.91
173 174 0.785708 CGTTGCGATGACGTTTGCTC 60.786 55.000 1.36 0.00 41.98 4.26
174 175 0.234625 GTTGCGATGACGTTTGCTCA 59.765 50.000 1.36 0.00 41.98 4.26
175 176 0.940833 TTGCGATGACGTTTGCTCAA 59.059 45.000 1.36 0.00 41.98 3.02
176 177 0.512518 TGCGATGACGTTTGCTCAAG 59.487 50.000 1.36 0.00 41.98 3.02
177 178 0.790866 GCGATGACGTTTGCTCAAGC 60.791 55.000 0.00 0.00 41.98 4.01
179 180 0.790866 GATGACGTTTGCTCAAGCGC 60.791 55.000 16.58 0.00 46.56 5.92
180 181 2.127232 GACGTTTGCTCAAGCGCC 60.127 61.111 16.58 4.33 46.56 6.53
181 182 3.911155 GACGTTTGCTCAAGCGCCG 62.911 63.158 16.58 0.00 46.56 6.46
182 183 4.741781 CGTTTGCTCAAGCGCCGG 62.742 66.667 2.29 0.00 45.83 6.13
202 203 4.035843 CGGAGCTTGGGAGGTAGT 57.964 61.111 0.00 0.00 32.79 2.73
203 204 1.817209 CGGAGCTTGGGAGGTAGTC 59.183 63.158 0.00 0.00 32.79 2.59
204 205 1.677637 CGGAGCTTGGGAGGTAGTCC 61.678 65.000 0.00 0.00 46.10 3.85
211 212 3.527641 GGAGGTAGTCCAGGAGCG 58.472 66.667 0.00 0.00 46.10 5.03
212 213 2.128507 GGAGGTAGTCCAGGAGCGG 61.129 68.421 0.00 0.00 46.10 5.52
213 214 1.076923 GAGGTAGTCCAGGAGCGGA 60.077 63.158 0.00 0.00 35.89 5.54
214 215 0.468400 GAGGTAGTCCAGGAGCGGAT 60.468 60.000 0.00 0.00 37.41 4.18
215 216 0.757188 AGGTAGTCCAGGAGCGGATG 60.757 60.000 0.00 0.00 37.41 3.51
216 217 1.068250 GTAGTCCAGGAGCGGATGC 59.932 63.158 0.00 0.00 37.41 3.91
217 218 1.381191 TAGTCCAGGAGCGGATGCA 60.381 57.895 0.00 0.00 46.23 3.96
218 219 1.395045 TAGTCCAGGAGCGGATGCAG 61.395 60.000 0.00 0.00 46.23 4.41
219 220 2.364186 TCCAGGAGCGGATGCAGA 60.364 61.111 0.00 0.00 46.23 4.26
220 221 1.763655 TCCAGGAGCGGATGCAGAT 60.764 57.895 0.00 0.00 46.23 2.90
221 222 1.147824 CCAGGAGCGGATGCAGATT 59.852 57.895 0.00 0.00 46.23 2.40
222 223 1.164662 CCAGGAGCGGATGCAGATTG 61.165 60.000 0.00 0.00 46.23 2.67
223 224 0.463295 CAGGAGCGGATGCAGATTGT 60.463 55.000 0.00 0.00 46.23 2.71
224 225 0.463295 AGGAGCGGATGCAGATTGTG 60.463 55.000 0.00 0.00 46.23 3.33
225 226 1.442526 GGAGCGGATGCAGATTGTGG 61.443 60.000 0.00 0.00 46.23 4.17
226 227 0.745845 GAGCGGATGCAGATTGTGGT 60.746 55.000 0.00 0.00 46.23 4.16
227 228 0.745845 AGCGGATGCAGATTGTGGTC 60.746 55.000 0.00 0.00 46.23 4.02
228 229 0.745845 GCGGATGCAGATTGTGGTCT 60.746 55.000 0.00 0.00 42.15 3.85
229 230 1.012086 CGGATGCAGATTGTGGTCTG 58.988 55.000 0.00 0.00 46.59 3.51
242 243 2.957680 TGTGGTCTGCATCAACAACATT 59.042 40.909 0.00 0.00 0.00 2.71
385 392 2.604046 AAGATGTAGGATCGTGTGCC 57.396 50.000 0.00 0.00 0.00 5.01
443 450 2.478031 CCTCCGACGTCTTAGTCATGTG 60.478 54.545 14.70 0.00 40.98 3.21
480 488 3.375239 TTCGATGGCGTGTCCGGA 61.375 61.111 0.00 0.00 38.98 5.14
497 505 4.643387 AGTGTTGCCCCGGTCTGC 62.643 66.667 0.00 0.00 0.00 4.26
521 529 2.411806 CGTTCAACGGTAATGGTTTCGG 60.412 50.000 0.61 0.00 38.08 4.30
573 584 2.227194 CTGCATATCAGCAATGGAGCA 58.773 47.619 0.00 0.00 45.13 4.26
591 602 3.807538 GCGTCGAGCTCGGGTGTA 61.808 66.667 33.98 13.46 44.04 2.90
665 677 1.647346 GTGACGAGTGTTGGTGTCAA 58.353 50.000 0.00 0.00 42.43 3.18
666 678 2.210116 GTGACGAGTGTTGGTGTCAAT 58.790 47.619 0.00 0.00 42.43 2.57
667 679 2.612212 GTGACGAGTGTTGGTGTCAATT 59.388 45.455 0.00 0.00 42.43 2.32
668 680 3.064820 GTGACGAGTGTTGGTGTCAATTT 59.935 43.478 0.00 0.00 42.43 1.82
669 681 3.311322 TGACGAGTGTTGGTGTCAATTTC 59.689 43.478 0.00 0.00 38.32 2.17
670 682 3.275143 ACGAGTGTTGGTGTCAATTTCA 58.725 40.909 0.00 0.00 35.10 2.69
671 683 3.312421 ACGAGTGTTGGTGTCAATTTCAG 59.688 43.478 0.00 0.00 35.10 3.02
672 684 3.312421 CGAGTGTTGGTGTCAATTTCAGT 59.688 43.478 0.00 0.00 35.10 3.41
673 685 4.601019 GAGTGTTGGTGTCAATTTCAGTG 58.399 43.478 0.00 0.00 35.10 3.66
674 686 3.381272 AGTGTTGGTGTCAATTTCAGTGG 59.619 43.478 0.00 0.00 35.10 4.00
675 687 3.130340 GTGTTGGTGTCAATTTCAGTGGT 59.870 43.478 0.00 0.00 35.10 4.16
676 688 3.766591 TGTTGGTGTCAATTTCAGTGGTT 59.233 39.130 0.00 0.00 35.10 3.67
677 689 4.221703 TGTTGGTGTCAATTTCAGTGGTTT 59.778 37.500 0.00 0.00 35.10 3.27
678 690 4.647424 TGGTGTCAATTTCAGTGGTTTC 57.353 40.909 0.00 0.00 0.00 2.78
679 691 4.277476 TGGTGTCAATTTCAGTGGTTTCT 58.723 39.130 0.00 0.00 0.00 2.52
680 692 4.709397 TGGTGTCAATTTCAGTGGTTTCTT 59.291 37.500 0.00 0.00 0.00 2.52
681 693 5.163561 TGGTGTCAATTTCAGTGGTTTCTTC 60.164 40.000 0.00 0.00 0.00 2.87
682 694 5.163561 GGTGTCAATTTCAGTGGTTTCTTCA 60.164 40.000 0.00 0.00 0.00 3.02
683 695 5.743872 GTGTCAATTTCAGTGGTTTCTTCAC 59.256 40.000 0.00 0.00 35.51 3.18
684 696 5.652014 TGTCAATTTCAGTGGTTTCTTCACT 59.348 36.000 0.00 0.00 45.29 3.41
685 697 6.152661 TGTCAATTTCAGTGGTTTCTTCACTT 59.847 34.615 0.00 0.00 42.87 3.16
686 698 7.035612 GTCAATTTCAGTGGTTTCTTCACTTT 58.964 34.615 0.00 0.00 42.87 2.66
687 699 7.545615 GTCAATTTCAGTGGTTTCTTCACTTTT 59.454 33.333 0.00 0.00 42.87 2.27
688 700 7.545265 TCAATTTCAGTGGTTTCTTCACTTTTG 59.455 33.333 0.00 0.00 42.87 2.44
689 701 5.975693 TTCAGTGGTTTCTTCACTTTTGT 57.024 34.783 0.00 0.00 42.87 2.83
690 702 5.975693 TCAGTGGTTTCTTCACTTTTGTT 57.024 34.783 0.00 0.00 42.87 2.83
691 703 6.339587 TCAGTGGTTTCTTCACTTTTGTTT 57.660 33.333 0.00 0.00 42.87 2.83
692 704 6.155827 TCAGTGGTTTCTTCACTTTTGTTTG 58.844 36.000 0.00 0.00 42.87 2.93
693 705 5.925969 CAGTGGTTTCTTCACTTTTGTTTGT 59.074 36.000 0.00 0.00 42.87 2.83
694 706 7.040340 TCAGTGGTTTCTTCACTTTTGTTTGTA 60.040 33.333 0.00 0.00 42.87 2.41
695 707 7.759433 CAGTGGTTTCTTCACTTTTGTTTGTAT 59.241 33.333 0.00 0.00 42.87 2.29
696 708 8.311109 AGTGGTTTCTTCACTTTTGTTTGTATT 58.689 29.630 0.00 0.00 42.17 1.89
697 709 8.931775 GTGGTTTCTTCACTTTTGTTTGTATTT 58.068 29.630 0.00 0.00 32.78 1.40
698 710 9.495572 TGGTTTCTTCACTTTTGTTTGTATTTT 57.504 25.926 0.00 0.00 0.00 1.82
725 737 4.379339 TTTAGTTGGTGTTCCTTTGTGC 57.621 40.909 0.00 0.00 34.23 4.57
726 738 1.846007 AGTTGGTGTTCCTTTGTGCA 58.154 45.000 0.00 0.00 34.23 4.57
727 739 2.175202 AGTTGGTGTTCCTTTGTGCAA 58.825 42.857 0.00 0.00 34.23 4.08
728 740 2.564947 AGTTGGTGTTCCTTTGTGCAAA 59.435 40.909 0.00 0.00 34.23 3.68
729 741 2.929398 GTTGGTGTTCCTTTGTGCAAAG 59.071 45.455 15.53 15.53 45.47 2.77
736 748 3.389741 CTTTGTGCAAAGGCTAGCG 57.610 52.632 9.00 0.00 42.96 4.26
737 749 0.593128 CTTTGTGCAAAGGCTAGCGT 59.407 50.000 9.00 6.32 42.96 5.07
738 750 1.001378 CTTTGTGCAAAGGCTAGCGTT 60.001 47.619 16.67 16.67 42.96 4.84
739 751 1.028905 TTGTGCAAAGGCTAGCGTTT 58.971 45.000 25.57 25.57 41.91 3.60
740 752 1.028905 TGTGCAAAGGCTAGCGTTTT 58.971 45.000 27.94 18.53 41.91 2.43
741 753 2.222886 TGTGCAAAGGCTAGCGTTTTA 58.777 42.857 27.94 18.75 41.91 1.52
742 754 2.031508 TGTGCAAAGGCTAGCGTTTTAC 60.032 45.455 27.94 26.43 41.91 2.01
743 755 2.225727 GTGCAAAGGCTAGCGTTTTACT 59.774 45.455 27.94 9.18 41.91 2.24
744 756 3.434299 GTGCAAAGGCTAGCGTTTTACTA 59.566 43.478 27.94 14.27 41.91 1.82
745 757 4.094442 GTGCAAAGGCTAGCGTTTTACTAT 59.906 41.667 27.94 8.14 41.91 2.12
746 758 4.094294 TGCAAAGGCTAGCGTTTTACTATG 59.906 41.667 27.94 19.06 41.91 2.23
747 759 4.094442 GCAAAGGCTAGCGTTTTACTATGT 59.906 41.667 27.94 6.76 36.96 2.29
748 760 5.292589 GCAAAGGCTAGCGTTTTACTATGTA 59.707 40.000 27.94 0.00 36.96 2.29
749 761 6.018180 GCAAAGGCTAGCGTTTTACTATGTAT 60.018 38.462 27.94 5.40 36.96 2.29
750 762 7.564988 CAAAGGCTAGCGTTTTACTATGTATC 58.435 38.462 27.94 0.83 32.60 2.24
751 763 5.780984 AGGCTAGCGTTTTACTATGTATCC 58.219 41.667 9.00 0.00 0.00 2.59
752 764 5.303589 AGGCTAGCGTTTTACTATGTATCCA 59.696 40.000 9.00 0.00 0.00 3.41
753 765 5.634020 GGCTAGCGTTTTACTATGTATCCAG 59.366 44.000 9.00 0.00 0.00 3.86
754 766 5.634020 GCTAGCGTTTTACTATGTATCCAGG 59.366 44.000 0.00 0.00 0.00 4.45
755 767 5.609533 AGCGTTTTACTATGTATCCAGGT 57.390 39.130 0.00 0.00 0.00 4.00
756 768 5.985911 AGCGTTTTACTATGTATCCAGGTT 58.014 37.500 0.00 0.00 0.00 3.50
757 769 6.412214 AGCGTTTTACTATGTATCCAGGTTT 58.588 36.000 0.00 0.00 0.00 3.27
758 770 6.315393 AGCGTTTTACTATGTATCCAGGTTTG 59.685 38.462 0.00 0.00 0.00 2.93
759 771 6.483687 CGTTTTACTATGTATCCAGGTTTGC 58.516 40.000 0.00 0.00 0.00 3.68
760 772 6.315393 CGTTTTACTATGTATCCAGGTTTGCT 59.685 38.462 0.00 0.00 0.00 3.91
761 773 7.493320 CGTTTTACTATGTATCCAGGTTTGCTA 59.507 37.037 0.00 0.00 0.00 3.49
762 774 8.827677 GTTTTACTATGTATCCAGGTTTGCTAG 58.172 37.037 0.00 0.00 0.00 3.42
763 775 7.907841 TTACTATGTATCCAGGTTTGCTAGA 57.092 36.000 0.00 0.00 0.00 2.43
764 776 8.492415 TTACTATGTATCCAGGTTTGCTAGAT 57.508 34.615 0.00 0.00 0.00 1.98
765 777 6.998802 ACTATGTATCCAGGTTTGCTAGATC 58.001 40.000 0.00 0.00 0.00 2.75
766 778 4.689612 TGTATCCAGGTTTGCTAGATCC 57.310 45.455 0.00 0.00 0.00 3.36
767 779 2.918712 ATCCAGGTTTGCTAGATCCG 57.081 50.000 0.00 0.00 0.00 4.18
768 780 1.568504 TCCAGGTTTGCTAGATCCGT 58.431 50.000 0.00 0.00 0.00 4.69
769 781 1.207089 TCCAGGTTTGCTAGATCCGTG 59.793 52.381 0.00 0.00 0.00 4.94
770 782 1.066143 CCAGGTTTGCTAGATCCGTGT 60.066 52.381 0.00 0.00 0.00 4.49
771 783 2.002586 CAGGTTTGCTAGATCCGTGTG 58.997 52.381 0.00 0.00 0.00 3.82
772 784 1.623811 AGGTTTGCTAGATCCGTGTGT 59.376 47.619 0.00 0.00 0.00 3.72
773 785 2.829720 AGGTTTGCTAGATCCGTGTGTA 59.170 45.455 0.00 0.00 0.00 2.90
774 786 2.928116 GGTTTGCTAGATCCGTGTGTAC 59.072 50.000 0.00 0.00 0.00 2.90
789 801 6.004928 CGTGTGTACGTGACTTGTATTATG 57.995 41.667 0.00 0.00 44.99 1.90
790 802 5.796437 CGTGTGTACGTGACTTGTATTATGA 59.204 40.000 0.00 0.00 44.99 2.15
791 803 6.471198 CGTGTGTACGTGACTTGTATTATGAT 59.529 38.462 0.00 0.00 44.99 2.45
792 804 7.008901 CGTGTGTACGTGACTTGTATTATGATT 59.991 37.037 0.00 0.00 44.99 2.57
793 805 8.318876 GTGTGTACGTGACTTGTATTATGATTC 58.681 37.037 0.00 0.00 0.00 2.52
794 806 8.248253 TGTGTACGTGACTTGTATTATGATTCT 58.752 33.333 0.00 0.00 0.00 2.40
795 807 9.084164 GTGTACGTGACTTGTATTATGATTCTT 57.916 33.333 0.00 0.00 0.00 2.52
1166 1185 0.627768 TGCTCCTCCTCCTCCTCCTA 60.628 60.000 0.00 0.00 0.00 2.94
1354 1376 3.641906 GCTATCTCCCAGCTGGTACTTAA 59.358 47.826 30.63 10.60 36.07 1.85
1393 1415 7.069826 CCTCTTCTCAACCATAGAGATCTCTTT 59.930 40.741 29.54 19.46 41.42 2.52
1421 1443 2.673368 GCTGTCCTATGGTTTCTGTTCG 59.327 50.000 0.00 0.00 0.00 3.95
1714 2463 0.104671 GCTTCTGTTTGGGCTTTGCA 59.895 50.000 0.00 0.00 0.00 4.08
1774 2523 9.914131 GCCTTAAGTTTAGATCAAAATTTGTCT 57.086 29.630 5.56 9.99 36.02 3.41
1818 2574 2.808543 CACTTGGCAGAGAACAACCTAC 59.191 50.000 4.13 0.00 0.00 3.18
1819 2575 2.224548 ACTTGGCAGAGAACAACCTACC 60.225 50.000 4.13 0.00 0.00 3.18
1820 2576 1.729586 TGGCAGAGAACAACCTACCT 58.270 50.000 0.00 0.00 0.00 3.08
1821 2577 2.897350 TGGCAGAGAACAACCTACCTA 58.103 47.619 0.00 0.00 0.00 3.08
2506 3345 8.829612 ACCATTCACAAAAGCTAAAATTGAAAG 58.170 29.630 8.05 2.35 0.00 2.62
2667 3506 6.656693 AGAAGTTATCAGGGAAATGTCTTGTG 59.343 38.462 0.00 0.00 0.00 3.33
3081 3920 3.016736 CCAGGTTGTTCCATGGTATGTC 58.983 50.000 12.58 1.24 39.02 3.06
3696 4590 4.036734 GCCGGAGATTTGAAATATTCTGCA 59.963 41.667 5.05 0.00 0.00 4.41
3883 4777 7.066374 ACTTAATGCTTTGAGACGAAGAATC 57.934 36.000 10.59 0.00 0.00 2.52
3922 4816 6.101997 GGGATTGAAGAAAGCAGGTATTTTG 58.898 40.000 0.00 0.00 0.00 2.44
3950 4844 6.435428 ACTTGGTTCATGTCATACGTTTTTC 58.565 36.000 0.00 0.00 0.00 2.29
4068 4962 2.238521 GTTGGATCTGAAACCTTGGCA 58.761 47.619 0.00 0.00 0.00 4.92
4176 5071 5.057149 GCATACTATAGACCCAAAGTGGTG 58.943 45.833 6.78 0.00 39.24 4.17
4255 5150 6.757897 TTTATCTGAAATGTTAGCTGGTGG 57.242 37.500 0.00 0.00 0.00 4.61
4256 5151 3.788227 TCTGAAATGTTAGCTGGTGGT 57.212 42.857 0.00 0.00 0.00 4.16
4257 5152 3.411446 TCTGAAATGTTAGCTGGTGGTG 58.589 45.455 0.00 0.00 0.00 4.17
4258 5153 1.885887 TGAAATGTTAGCTGGTGGTGC 59.114 47.619 0.00 0.00 0.00 5.01
4285 5180 2.942376 TGACACAAGAAATCACTGCGTT 59.058 40.909 0.00 0.00 0.00 4.84
4287 5182 2.682856 ACACAAGAAATCACTGCGTTGT 59.317 40.909 0.00 0.00 0.00 3.32
4295 5190 3.752412 ATCACTGCGTTGTTGATGATG 57.248 42.857 0.00 0.00 0.00 3.07
4365 6004 2.790433 GCTGTCCCCATTTGTAAGACA 58.210 47.619 0.00 0.00 36.16 3.41
4370 6009 2.041081 TCCCCATTTGTAAGACACCCTG 59.959 50.000 0.00 0.00 0.00 4.45
4410 6049 5.178252 GTCTTACAAAAAGGAACGGAGGTAC 59.822 44.000 0.00 0.00 0.00 3.34
4423 6062 2.680066 AGGTACTCCCTCCGTTTGG 58.320 57.895 0.00 0.00 40.71 3.28
4424 6063 0.115745 AGGTACTCCCTCCGTTTGGA 59.884 55.000 0.00 0.00 40.71 3.53
4425 6064 0.978907 GGTACTCCCTCCGTTTGGAA 59.021 55.000 0.00 0.00 45.87 3.53
4426 6065 1.558294 GGTACTCCCTCCGTTTGGAAT 59.442 52.381 0.00 0.00 45.87 3.01
4427 6066 2.026542 GGTACTCCCTCCGTTTGGAATT 60.027 50.000 0.00 0.00 45.87 2.17
4428 6067 3.198417 GGTACTCCCTCCGTTTGGAATTA 59.802 47.826 0.00 0.00 45.87 1.40
4429 6068 3.345508 ACTCCCTCCGTTTGGAATTAC 57.654 47.619 0.00 0.00 45.87 1.89
4430 6069 2.910977 ACTCCCTCCGTTTGGAATTACT 59.089 45.455 0.00 0.00 45.87 2.24
4431 6070 3.329814 ACTCCCTCCGTTTGGAATTACTT 59.670 43.478 0.00 0.00 45.87 2.24
4432 6071 3.681593 TCCCTCCGTTTGGAATTACTTG 58.318 45.455 0.00 0.00 45.87 3.16
4433 6072 3.073356 TCCCTCCGTTTGGAATTACTTGT 59.927 43.478 0.00 0.00 45.87 3.16
4434 6073 3.439129 CCCTCCGTTTGGAATTACTTGTC 59.561 47.826 0.00 0.00 45.87 3.18
4435 6074 4.069304 CCTCCGTTTGGAATTACTTGTCA 58.931 43.478 0.00 0.00 45.87 3.58
4436 6075 4.083484 CCTCCGTTTGGAATTACTTGTCAC 60.083 45.833 0.00 0.00 45.87 3.67
4437 6076 4.452825 TCCGTTTGGAATTACTTGTCACA 58.547 39.130 0.00 0.00 42.85 3.58
4438 6077 4.882427 TCCGTTTGGAATTACTTGTCACAA 59.118 37.500 0.00 0.00 42.85 3.33
4439 6078 5.357314 TCCGTTTGGAATTACTTGTCACAAA 59.643 36.000 0.00 0.00 42.85 2.83
4440 6079 6.037098 CCGTTTGGAATTACTTGTCACAAAA 58.963 36.000 0.00 0.00 37.49 2.44
4441 6080 6.531948 CCGTTTGGAATTACTTGTCACAAAAA 59.468 34.615 0.00 0.00 37.49 1.94
4442 6081 7.223777 CCGTTTGGAATTACTTGTCACAAAAAT 59.776 33.333 0.00 0.00 37.49 1.82
4443 6082 8.055402 CGTTTGGAATTACTTGTCACAAAAATG 58.945 33.333 0.00 0.00 0.00 2.32
4444 6083 8.334632 GTTTGGAATTACTTGTCACAAAAATGG 58.665 33.333 0.00 0.00 0.00 3.16
4445 6084 7.353414 TGGAATTACTTGTCACAAAAATGGA 57.647 32.000 0.00 0.00 0.00 3.41
4446 6085 7.961351 TGGAATTACTTGTCACAAAAATGGAT 58.039 30.769 0.00 0.00 0.00 3.41
4447 6086 9.083422 TGGAATTACTTGTCACAAAAATGGATA 57.917 29.630 0.00 0.00 0.00 2.59
4448 6087 9.921637 GGAATTACTTGTCACAAAAATGGATAA 57.078 29.630 0.00 0.00 0.00 1.75
4454 6093 9.054922 ACTTGTCACAAAAATGGATAAAAATGG 57.945 29.630 0.00 0.00 0.00 3.16
4455 6094 9.270640 CTTGTCACAAAAATGGATAAAAATGGA 57.729 29.630 0.00 0.00 0.00 3.41
4456 6095 9.790344 TTGTCACAAAAATGGATAAAAATGGAT 57.210 25.926 0.00 0.00 0.00 3.41
4457 6096 9.217278 TGTCACAAAAATGGATAAAAATGGATG 57.783 29.630 0.00 0.00 0.00 3.51
4458 6097 9.218440 GTCACAAAAATGGATAAAAATGGATGT 57.782 29.630 0.00 0.00 0.00 3.06
4500 6139 9.553064 ACATCTAGATACATTCATTTCTTGGAC 57.447 33.333 4.54 0.00 0.00 4.02
4501 6140 8.706936 CATCTAGATACATTCATTTCTTGGACG 58.293 37.037 4.54 0.00 0.00 4.79
4502 6141 8.007405 TCTAGATACATTCATTTCTTGGACGA 57.993 34.615 0.00 0.00 0.00 4.20
4503 6142 8.138074 TCTAGATACATTCATTTCTTGGACGAG 58.862 37.037 0.00 0.00 0.00 4.18
4504 6143 6.644347 AGATACATTCATTTCTTGGACGAGT 58.356 36.000 0.00 0.00 0.00 4.18
4505 6144 7.782049 AGATACATTCATTTCTTGGACGAGTA 58.218 34.615 0.00 0.00 0.00 2.59
4506 6145 8.258007 AGATACATTCATTTCTTGGACGAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
4507 6146 8.964476 ATACATTCATTTCTTGGACGAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
4508 6147 7.687941 ACATTCATTTCTTGGACGAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
4509 6148 7.752695 ACATTCATTTCTTGGACGAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
4510 6149 6.737254 TTCATTTCTTGGACGAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
4511 6150 4.868171 TCATTTCTTGGACGAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
4512 6151 4.524316 TTTCTTGGACGAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
4513 6152 4.524316 TTCTTGGACGAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
4514 6153 3.841643 TCTTGGACGAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
4515 6154 2.267188 TGGACGAGTAATTCCGAACG 57.733 50.000 0.00 0.00 0.00 3.95
4516 6155 1.135315 TGGACGAGTAATTCCGAACGG 60.135 52.381 6.94 6.94 0.00 4.44
4517 6156 1.133025 GGACGAGTAATTCCGAACGGA 59.867 52.381 12.04 12.04 43.52 4.69
4518 6157 2.448219 GACGAGTAATTCCGAACGGAG 58.552 52.381 15.34 5.60 46.06 4.63
4519 6158 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
4520 6159 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
4521 6160 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
4522 6161 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4523 6162 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4524 6163 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4535 6174 5.903198 ACGGAGGGAGTAGTACTAGTTAT 57.097 43.478 11.56 1.46 0.00 1.89
4749 6398 6.544928 TTAGATTATTGGACTCACAGAGCA 57.455 37.500 0.00 0.00 32.04 4.26
4762 6411 7.758980 GGACTCACAGAGCATATGTTGATATAG 59.241 40.741 4.29 0.00 32.04 1.31
4848 6498 3.777106 TGCTGGTCTCAGTCTCAAAAT 57.223 42.857 0.00 0.00 42.78 1.82
4890 6540 7.010697 TGTATGTAGCATTGGAACATAAACG 57.989 36.000 0.00 0.00 37.72 3.60
4908 6558 8.889717 ACATAAACGATCTTTAAGGTGTTATGG 58.110 33.333 13.09 0.00 0.00 2.74
5183 6837 0.322546 GGGCAGAAGGTTGATCCGTT 60.323 55.000 0.00 0.00 41.99 4.44
5184 6838 0.804989 GGCAGAAGGTTGATCCGTTG 59.195 55.000 0.00 0.00 41.99 4.10
5295 6949 6.816640 TCCATTATTTGTCGAACAGTTAGAGG 59.183 38.462 0.00 0.00 0.00 3.69
5394 7048 1.660607 CTACATGTACAGGTGCTTGCG 59.339 52.381 22.69 1.27 0.00 4.85
5395 7049 1.135315 CATGTACAGGTGCTTGCGC 59.865 57.895 0.00 0.00 0.00 6.09
5443 7097 5.474876 CCTTGGTTGTTAAGAAGATTCTGCT 59.525 40.000 0.00 0.00 37.65 4.24
5494 7148 1.374505 TAGCGTGGCGGTTTGTACC 60.375 57.895 0.00 0.00 38.83 3.34
5506 7160 3.244318 CGGTTTGTACCCCTTTCTACAGT 60.244 47.826 0.00 0.00 41.75 3.55
5528 7182 5.249393 AGTTTGACCTACACCTCATTCAGAT 59.751 40.000 0.00 0.00 0.00 2.90
5579 7240 0.749454 ACTGGCGAGAAATGCATCCC 60.749 55.000 1.44 0.00 0.00 3.85
5581 7242 0.749091 TGGCGAGAAATGCATCCCTG 60.749 55.000 0.00 0.00 0.00 4.45
5600 7261 3.062763 CTGTCCTTGTGTCTGCACTAAG 58.937 50.000 0.00 2.36 45.44 2.18
5686 7347 3.047735 CCGGGTTTGGGCTTTGTC 58.952 61.111 0.00 0.00 0.00 3.18
5729 7391 1.933284 TGGGCCCAGGCTTCCATTA 60.933 57.895 24.45 0.00 41.60 1.90
5760 7422 0.837272 GGGCTGGGCTTAGATGTGTA 59.163 55.000 0.00 0.00 0.00 2.90
5770 7432 6.877322 TGGGCTTAGATGTGTAGAACTAAAAC 59.123 38.462 0.00 0.00 0.00 2.43
5780 7442 9.730420 ATGTGTAGAACTAAAACAACAACATTC 57.270 29.630 0.00 0.00 0.00 2.67
5781 7443 8.952278 TGTGTAGAACTAAAACAACAACATTCT 58.048 29.630 0.00 0.00 0.00 2.40
5787 7449 9.301153 GAACTAAAACAACAACATTCTTGTCAT 57.699 29.630 0.00 0.00 34.06 3.06
5949 7613 6.149474 GTGTATGATCAGGTTTAGTTTGCACT 59.851 38.462 0.09 0.00 36.99 4.40
5996 7663 3.006110 CCTTCAAAATGTGCATGGAGTGT 59.994 43.478 0.00 0.00 0.00 3.55
6008 7675 2.495155 TGGAGTGTGGTCCATGATTG 57.505 50.000 0.00 0.00 41.99 2.67
6014 7681 5.200368 AGTGTGGTCCATGATTGTTTTTC 57.800 39.130 0.00 0.00 0.00 2.29
6022 7689 3.306502 CCATGATTGTTTTTCAGGCTGCT 60.307 43.478 10.34 0.00 0.00 4.24
6025 7692 2.869233 TTGTTTTTCAGGCTGCTGAC 57.131 45.000 10.34 6.42 32.47 3.51
6063 7730 5.088739 CAGAGTTTGTCATAATGCGGTTTC 58.911 41.667 0.00 0.00 0.00 2.78
6064 7731 5.003804 AGAGTTTGTCATAATGCGGTTTCT 58.996 37.500 0.00 0.00 0.00 2.52
6066 7733 5.699839 AGTTTGTCATAATGCGGTTTCTTC 58.300 37.500 0.00 0.00 0.00 2.87
6069 7740 5.545658 TGTCATAATGCGGTTTCTTCTTC 57.454 39.130 0.00 0.00 0.00 2.87
6076 7747 5.774498 ATGCGGTTTCTTCTTCTTCTTTT 57.226 34.783 0.00 0.00 0.00 2.27
6077 7748 5.576447 TGCGGTTTCTTCTTCTTCTTTTT 57.424 34.783 0.00 0.00 0.00 1.94
6116 7792 6.875972 ACTCAATACTCATAAGTTGGAGGT 57.124 37.500 10.12 1.30 36.92 3.85
6165 7841 9.890629 ACATTGCAATACGATGGTCTTATATAT 57.109 29.630 12.53 0.00 43.61 0.86
6259 7941 0.387878 CATGAGCCCGAGTCGATAGC 60.388 60.000 15.64 13.71 0.00 2.97
6312 7995 3.794737 TCGGCTGTCGACTAGGTAT 57.205 52.632 17.92 0.00 43.74 2.73
6333 8016 1.019278 GCATTGTGACGGTCCGATGT 61.019 55.000 20.51 0.00 0.00 3.06
6339 8022 1.290955 GACGGTCCGATGTGGTTCA 59.709 57.895 20.51 0.00 39.52 3.18
6341 8024 2.092291 CGGTCCGATGTGGTTCACG 61.092 63.158 4.91 0.00 37.14 4.35
6342 8025 1.005394 GGTCCGATGTGGTTCACGT 60.005 57.895 0.00 0.00 37.14 4.49
6343 8026 1.012486 GGTCCGATGTGGTTCACGTC 61.012 60.000 9.50 9.50 44.25 4.34
6346 8029 4.979204 GATGTGGTTCACGTCGGA 57.021 55.556 4.76 0.00 39.96 4.55
6347 8030 2.738147 GATGTGGTTCACGTCGGAG 58.262 57.895 4.76 0.00 39.96 4.63
6348 8031 0.038526 GATGTGGTTCACGTCGGAGT 60.039 55.000 4.76 0.00 39.96 3.85
6349 8032 0.319555 ATGTGGTTCACGTCGGAGTG 60.320 55.000 0.00 5.08 43.11 3.51
6354 8037 4.794199 TCACGTCGGAGTGAGACT 57.206 55.556 9.27 0.00 45.18 3.24
6522 8217 1.226717 GCACGATGACGGTCTCCTC 60.227 63.158 9.88 3.21 44.46 3.71
6539 8234 1.532316 TCGAAGACTTCACCGGGGT 60.532 57.895 15.36 0.00 0.00 4.95
6553 8249 1.988406 GGGGTGAACGACCTAGGCT 60.988 63.158 9.30 0.00 45.33 4.58
6558 8254 2.202566 GTGAACGACCTAGGCTTATGC 58.797 52.381 9.30 0.00 38.76 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.392589 AGGAGTGCCCAATAAATGCG 58.607 50.000 0.00 0.00 37.41 4.73
3 4 2.497273 ACAAGGAGTGCCCAATAAATGC 59.503 45.455 0.00 0.00 37.41 3.56
5 6 4.159557 ACAACAAGGAGTGCCCAATAAAT 58.840 39.130 0.00 0.00 37.41 1.40
6 7 3.571590 ACAACAAGGAGTGCCCAATAAA 58.428 40.909 0.00 0.00 37.41 1.40
7 8 3.153919 GACAACAAGGAGTGCCCAATAA 58.846 45.455 0.00 0.00 37.41 1.40
8 9 2.375174 AGACAACAAGGAGTGCCCAATA 59.625 45.455 0.00 0.00 37.41 1.90
9 10 1.145738 AGACAACAAGGAGTGCCCAAT 59.854 47.619 0.00 0.00 37.41 3.16
10 11 0.550914 AGACAACAAGGAGTGCCCAA 59.449 50.000 0.00 0.00 37.41 4.12
11 12 0.108585 GAGACAACAAGGAGTGCCCA 59.891 55.000 0.00 0.00 37.41 5.36
12 13 0.951040 CGAGACAACAAGGAGTGCCC 60.951 60.000 0.00 0.00 33.31 5.36
13 14 0.249911 ACGAGACAACAAGGAGTGCC 60.250 55.000 0.00 0.00 0.00 5.01
14 15 0.861837 CACGAGACAACAAGGAGTGC 59.138 55.000 0.00 0.00 0.00 4.40
15 16 2.398498 CTCACGAGACAACAAGGAGTG 58.602 52.381 0.00 0.00 0.00 3.51
16 17 1.269831 GCTCACGAGACAACAAGGAGT 60.270 52.381 0.00 0.00 0.00 3.85
17 18 1.000283 AGCTCACGAGACAACAAGGAG 60.000 52.381 0.00 0.00 0.00 3.69
18 19 1.040646 AGCTCACGAGACAACAAGGA 58.959 50.000 0.00 0.00 0.00 3.36
19 20 1.795286 GAAGCTCACGAGACAACAAGG 59.205 52.381 0.00 0.00 0.00 3.61
20 21 2.748605 AGAAGCTCACGAGACAACAAG 58.251 47.619 0.00 0.00 0.00 3.16
21 22 2.890808 AGAAGCTCACGAGACAACAA 57.109 45.000 0.00 0.00 0.00 2.83
22 23 2.866156 CAAAGAAGCTCACGAGACAACA 59.134 45.455 0.00 0.00 0.00 3.33
23 24 2.348966 GCAAAGAAGCTCACGAGACAAC 60.349 50.000 0.00 0.00 0.00 3.32
24 25 1.867233 GCAAAGAAGCTCACGAGACAA 59.133 47.619 0.00 0.00 0.00 3.18
25 26 1.069204 AGCAAAGAAGCTCACGAGACA 59.931 47.619 0.00 0.00 42.18 3.41
26 27 1.789506 AGCAAAGAAGCTCACGAGAC 58.210 50.000 0.00 0.00 42.18 3.36
27 28 2.036475 AGAAGCAAAGAAGCTCACGAGA 59.964 45.455 0.00 0.00 45.89 4.04
28 29 2.411904 AGAAGCAAAGAAGCTCACGAG 58.588 47.619 0.00 0.00 45.89 4.18
29 30 2.533266 AGAAGCAAAGAAGCTCACGA 57.467 45.000 0.00 0.00 45.89 4.35
30 31 2.670414 CCTAGAAGCAAAGAAGCTCACG 59.330 50.000 0.00 0.00 45.89 4.35
31 32 3.006247 CCCTAGAAGCAAAGAAGCTCAC 58.994 50.000 0.00 0.00 45.89 3.51
32 33 2.639839 ACCCTAGAAGCAAAGAAGCTCA 59.360 45.455 0.00 0.00 45.89 4.26
33 34 3.342377 ACCCTAGAAGCAAAGAAGCTC 57.658 47.619 0.00 0.00 45.89 4.09
35 36 3.935828 CACTACCCTAGAAGCAAAGAAGC 59.064 47.826 0.00 0.00 0.00 3.86
36 37 5.172205 GTCACTACCCTAGAAGCAAAGAAG 58.828 45.833 0.00 0.00 0.00 2.85
37 38 4.020485 GGTCACTACCCTAGAAGCAAAGAA 60.020 45.833 0.00 0.00 40.21 2.52
38 39 3.514309 GGTCACTACCCTAGAAGCAAAGA 59.486 47.826 0.00 0.00 40.21 2.52
39 40 3.863041 GGTCACTACCCTAGAAGCAAAG 58.137 50.000 0.00 0.00 40.21 2.77
40 41 3.975168 GGTCACTACCCTAGAAGCAAA 57.025 47.619 0.00 0.00 40.21 3.68
51 52 1.829849 GTCCTACCCAAGGTCACTACC 59.170 57.143 0.00 0.00 46.62 3.18
52 53 1.475682 CGTCCTACCCAAGGTCACTAC 59.524 57.143 0.00 0.00 46.62 2.73
53 54 1.076024 ACGTCCTACCCAAGGTCACTA 59.924 52.381 0.00 0.00 46.62 2.74
54 55 0.178941 ACGTCCTACCCAAGGTCACT 60.179 55.000 0.00 0.00 46.62 3.41
55 56 1.549203 TACGTCCTACCCAAGGTCAC 58.451 55.000 0.00 0.00 46.62 3.67
56 57 2.537633 ATACGTCCTACCCAAGGTCA 57.462 50.000 0.00 0.00 46.62 4.02
57 58 2.889678 CCTATACGTCCTACCCAAGGTC 59.110 54.545 0.00 0.00 46.62 3.85
58 59 2.245806 ACCTATACGTCCTACCCAAGGT 59.754 50.000 0.00 0.00 46.62 3.50
60 61 3.559069 TGACCTATACGTCCTACCCAAG 58.441 50.000 0.00 0.00 31.35 3.61
61 62 3.559069 CTGACCTATACGTCCTACCCAA 58.441 50.000 0.00 0.00 31.35 4.12
62 63 2.158564 CCTGACCTATACGTCCTACCCA 60.159 54.545 0.00 0.00 31.35 4.51
63 64 2.512705 CCTGACCTATACGTCCTACCC 58.487 57.143 0.00 0.00 31.35 3.69
64 65 1.885233 GCCTGACCTATACGTCCTACC 59.115 57.143 0.00 0.00 31.35 3.18
65 66 1.885233 GGCCTGACCTATACGTCCTAC 59.115 57.143 0.00 0.00 34.51 3.18
66 67 2.283145 GGCCTGACCTATACGTCCTA 57.717 55.000 0.00 0.00 34.51 2.94
67 68 3.128681 GGCCTGACCTATACGTCCT 57.871 57.895 0.00 0.00 34.51 3.85
78 79 1.049402 GGTAGGGTCATAGGCCTGAC 58.951 60.000 17.99 16.31 43.90 3.51
79 80 0.105142 GGGTAGGGTCATAGGCCTGA 60.105 60.000 17.99 2.17 0.00 3.86
80 81 1.128188 GGGGTAGGGTCATAGGCCTG 61.128 65.000 17.99 0.00 0.00 4.85
81 82 1.239235 GGGGTAGGGTCATAGGCCT 59.761 63.158 11.78 11.78 0.00 5.19
82 83 1.074014 TGGGGTAGGGTCATAGGCC 60.074 63.158 0.00 0.00 0.00 5.19
83 84 1.128188 CCTGGGGTAGGGTCATAGGC 61.128 65.000 0.00 0.00 43.33 3.93
84 85 3.165657 CCTGGGGTAGGGTCATAGG 57.834 63.158 0.00 0.00 43.33 2.57
93 94 6.197903 TGATGATGATATAGACCTGGGGTAG 58.802 44.000 0.00 0.00 35.25 3.18
94 95 6.165742 TGATGATGATATAGACCTGGGGTA 57.834 41.667 0.00 0.00 35.25 3.69
95 96 5.028678 TGATGATGATATAGACCTGGGGT 57.971 43.478 0.00 0.00 39.44 4.95
96 97 5.664457 TGATGATGATGATATAGACCTGGGG 59.336 44.000 0.00 0.00 0.00 4.96
97 98 6.803366 TGATGATGATGATATAGACCTGGG 57.197 41.667 0.00 0.00 0.00 4.45
98 99 7.290481 AGGATGATGATGATGATATAGACCTGG 59.710 40.741 0.00 0.00 0.00 4.45
99 100 8.252624 AGGATGATGATGATGATATAGACCTG 57.747 38.462 0.00 0.00 0.00 4.00
100 101 7.231115 CGAGGATGATGATGATGATATAGACCT 59.769 40.741 0.00 0.00 0.00 3.85
101 102 7.014134 ACGAGGATGATGATGATGATATAGACC 59.986 40.741 0.00 0.00 0.00 3.85
102 103 7.861872 CACGAGGATGATGATGATGATATAGAC 59.138 40.741 0.00 0.00 0.00 2.59
103 104 7.014038 CCACGAGGATGATGATGATGATATAGA 59.986 40.741 0.00 0.00 36.89 1.98
104 105 7.146648 CCACGAGGATGATGATGATGATATAG 58.853 42.308 0.00 0.00 36.89 1.31
105 106 6.608808 ACCACGAGGATGATGATGATGATATA 59.391 38.462 5.68 0.00 38.69 0.86
106 107 5.424573 ACCACGAGGATGATGATGATGATAT 59.575 40.000 5.68 0.00 38.69 1.63
107 108 4.774200 ACCACGAGGATGATGATGATGATA 59.226 41.667 5.68 0.00 38.69 2.15
108 109 3.581770 ACCACGAGGATGATGATGATGAT 59.418 43.478 5.68 0.00 38.69 2.45
109 110 2.967887 ACCACGAGGATGATGATGATGA 59.032 45.455 5.68 0.00 38.69 2.92
110 111 3.064931 CACCACGAGGATGATGATGATG 58.935 50.000 5.68 0.00 38.69 3.07
111 112 2.038164 CCACCACGAGGATGATGATGAT 59.962 50.000 5.68 0.00 38.69 2.45
112 113 1.413812 CCACCACGAGGATGATGATGA 59.586 52.381 5.68 0.00 38.69 2.92
113 114 1.413812 TCCACCACGAGGATGATGATG 59.586 52.381 5.68 0.00 38.69 3.07
114 115 1.414181 GTCCACCACGAGGATGATGAT 59.586 52.381 5.68 0.00 37.52 2.45
115 116 0.824109 GTCCACCACGAGGATGATGA 59.176 55.000 5.68 0.00 37.52 2.92
116 117 0.536724 TGTCCACCACGAGGATGATG 59.463 55.000 5.68 0.00 37.52 3.07
117 118 1.139654 CATGTCCACCACGAGGATGAT 59.860 52.381 5.68 0.00 37.52 2.45
118 119 0.536724 CATGTCCACCACGAGGATGA 59.463 55.000 5.68 0.00 37.52 2.92
119 120 0.250234 ACATGTCCACCACGAGGATG 59.750 55.000 5.68 0.71 37.52 3.51
120 121 0.250234 CACATGTCCACCACGAGGAT 59.750 55.000 5.68 0.00 37.52 3.24
121 122 1.118965 ACACATGTCCACCACGAGGA 61.119 55.000 5.68 0.00 38.69 3.71
122 123 0.670546 GACACATGTCCACCACGAGG 60.671 60.000 0.00 0.00 39.07 4.63
123 124 2.827604 GACACATGTCCACCACGAG 58.172 57.895 0.00 0.00 39.07 4.18
132 133 1.153549 GAGCCCGAGGACACATGTC 60.154 63.158 0.00 3.27 44.04 3.06
133 134 2.660064 GGAGCCCGAGGACACATGT 61.660 63.158 0.00 0.00 0.00 3.21
134 135 2.187946 GGAGCCCGAGGACACATG 59.812 66.667 0.00 0.00 0.00 3.21
145 146 4.814294 ATCGCAACGACGGAGCCC 62.814 66.667 0.00 0.00 39.18 5.19
146 147 3.554692 CATCGCAACGACGGAGCC 61.555 66.667 0.00 0.00 39.18 4.70
147 148 2.506217 TCATCGCAACGACGGAGC 60.506 61.111 0.00 1.34 39.18 4.70
148 149 3.374330 GTCATCGCAACGACGGAG 58.626 61.111 0.00 0.00 39.18 4.63
152 153 1.052768 GCAAACGTCATCGCAACGAC 61.053 55.000 10.31 0.00 42.62 4.34
153 154 1.203065 GCAAACGTCATCGCAACGA 59.797 52.632 10.31 0.00 42.62 3.85
154 155 0.785708 GAGCAAACGTCATCGCAACG 60.786 55.000 0.00 3.10 45.37 4.10
155 156 0.234625 TGAGCAAACGTCATCGCAAC 59.765 50.000 0.00 0.00 41.18 4.17
156 157 0.940833 TTGAGCAAACGTCATCGCAA 59.059 45.000 0.00 0.00 41.18 4.85
157 158 0.512518 CTTGAGCAAACGTCATCGCA 59.487 50.000 0.00 0.00 41.18 5.10
158 159 0.790866 GCTTGAGCAAACGTCATCGC 60.791 55.000 0.00 0.00 41.59 4.58
159 160 0.517132 CGCTTGAGCAAACGTCATCG 60.517 55.000 3.65 0.00 42.21 3.84
160 161 0.790866 GCGCTTGAGCAAACGTCATC 60.791 55.000 0.00 0.00 42.21 2.92
161 162 1.207593 GCGCTTGAGCAAACGTCAT 59.792 52.632 0.00 0.00 42.21 3.06
162 163 2.631428 GCGCTTGAGCAAACGTCA 59.369 55.556 0.00 0.00 42.21 4.35
163 164 2.127232 GGCGCTTGAGCAAACGTC 60.127 61.111 7.64 1.74 42.21 4.34
164 165 4.012895 CGGCGCTTGAGCAAACGT 62.013 61.111 7.64 0.00 42.21 3.99
165 166 4.741781 CCGGCGCTTGAGCAAACG 62.742 66.667 7.64 0.00 42.21 3.60
183 184 3.432051 CTACCTCCCAAGCTCCGCG 62.432 68.421 0.00 0.00 0.00 6.46
184 185 2.299503 GACTACCTCCCAAGCTCCGC 62.300 65.000 0.00 0.00 0.00 5.54
185 186 1.677637 GGACTACCTCCCAAGCTCCG 61.678 65.000 0.00 0.00 31.83 4.63
186 187 0.617820 TGGACTACCTCCCAAGCTCC 60.618 60.000 0.00 0.00 38.49 4.70
187 188 0.827368 CTGGACTACCTCCCAAGCTC 59.173 60.000 0.00 0.00 38.49 4.09
188 189 0.618968 CCTGGACTACCTCCCAAGCT 60.619 60.000 0.00 0.00 38.49 3.74
189 190 0.617820 TCCTGGACTACCTCCCAAGC 60.618 60.000 0.00 0.00 38.49 4.01
190 191 1.490574 CTCCTGGACTACCTCCCAAG 58.509 60.000 0.00 0.00 38.49 3.61
191 192 0.617820 GCTCCTGGACTACCTCCCAA 60.618 60.000 0.00 0.00 38.49 4.12
192 193 1.001760 GCTCCTGGACTACCTCCCA 59.998 63.158 0.00 0.00 38.49 4.37
193 194 2.128507 CGCTCCTGGACTACCTCCC 61.129 68.421 0.00 0.00 38.49 4.30
194 195 2.128507 CCGCTCCTGGACTACCTCC 61.129 68.421 0.00 0.00 39.97 4.30
195 196 0.468400 ATCCGCTCCTGGACTACCTC 60.468 60.000 0.00 0.00 41.85 3.85
196 197 0.757188 CATCCGCTCCTGGACTACCT 60.757 60.000 0.00 0.00 41.85 3.08
197 198 1.742768 CATCCGCTCCTGGACTACC 59.257 63.158 0.00 0.00 41.85 3.18
198 199 1.068250 GCATCCGCTCCTGGACTAC 59.932 63.158 0.00 0.00 41.85 2.73
199 200 1.381191 TGCATCCGCTCCTGGACTA 60.381 57.895 0.00 0.00 41.85 2.59
200 201 2.685017 TGCATCCGCTCCTGGACT 60.685 61.111 0.00 0.00 41.85 3.85
201 202 2.037620 ATCTGCATCCGCTCCTGGAC 62.038 60.000 0.00 0.00 41.85 4.02
202 203 1.340399 AATCTGCATCCGCTCCTGGA 61.340 55.000 0.00 0.00 43.58 3.86
203 204 1.147824 AATCTGCATCCGCTCCTGG 59.852 57.895 0.00 0.00 39.64 4.45
204 205 0.463295 ACAATCTGCATCCGCTCCTG 60.463 55.000 0.00 0.00 39.64 3.86
205 206 0.463295 CACAATCTGCATCCGCTCCT 60.463 55.000 0.00 0.00 39.64 3.69
206 207 1.442526 CCACAATCTGCATCCGCTCC 61.443 60.000 0.00 0.00 39.64 4.70
207 208 0.745845 ACCACAATCTGCATCCGCTC 60.746 55.000 0.00 0.00 39.64 5.03
208 209 0.745845 GACCACAATCTGCATCCGCT 60.746 55.000 0.00 0.00 39.64 5.52
209 210 0.745845 AGACCACAATCTGCATCCGC 60.746 55.000 0.00 0.00 39.24 5.54
210 211 1.012086 CAGACCACAATCTGCATCCG 58.988 55.000 0.00 0.00 39.77 4.18
217 218 3.144657 TGTTGATGCAGACCACAATCT 57.855 42.857 0.00 0.00 0.00 2.40
218 219 3.004629 TGTTGTTGATGCAGACCACAATC 59.995 43.478 13.41 9.50 0.00 2.67
219 220 2.957680 TGTTGTTGATGCAGACCACAAT 59.042 40.909 13.41 0.00 0.00 2.71
220 221 2.373224 TGTTGTTGATGCAGACCACAA 58.627 42.857 8.50 8.50 0.00 3.33
221 222 2.049888 TGTTGTTGATGCAGACCACA 57.950 45.000 0.00 0.00 0.00 4.17
222 223 3.254166 AGAATGTTGTTGATGCAGACCAC 59.746 43.478 0.00 0.00 0.00 4.16
223 224 3.489355 AGAATGTTGTTGATGCAGACCA 58.511 40.909 0.00 0.00 0.00 4.02
224 225 3.425359 CGAGAATGTTGTTGATGCAGACC 60.425 47.826 0.00 0.00 0.00 3.85
225 226 3.187227 ACGAGAATGTTGTTGATGCAGAC 59.813 43.478 0.00 0.00 0.00 3.51
226 227 3.187022 CACGAGAATGTTGTTGATGCAGA 59.813 43.478 0.00 0.00 0.00 4.26
227 228 3.485633 CACGAGAATGTTGTTGATGCAG 58.514 45.455 0.00 0.00 0.00 4.41
228 229 2.226200 CCACGAGAATGTTGTTGATGCA 59.774 45.455 0.00 0.00 0.00 3.96
229 230 2.226437 ACCACGAGAATGTTGTTGATGC 59.774 45.455 0.00 0.00 0.00 3.91
230 231 3.365264 CCACCACGAGAATGTTGTTGATG 60.365 47.826 0.00 0.00 0.00 3.07
231 232 2.813754 CCACCACGAGAATGTTGTTGAT 59.186 45.455 0.00 0.00 0.00 2.57
232 233 2.158885 TCCACCACGAGAATGTTGTTGA 60.159 45.455 0.00 0.00 0.00 3.18
233 234 2.032030 GTCCACCACGAGAATGTTGTTG 60.032 50.000 0.00 0.00 0.00 3.33
234 235 2.218603 GTCCACCACGAGAATGTTGTT 58.781 47.619 0.00 0.00 0.00 2.83
235 236 1.140052 TGTCCACCACGAGAATGTTGT 59.860 47.619 0.00 0.00 0.00 3.32
242 243 0.317160 GACACATGTCCACCACGAGA 59.683 55.000 0.00 0.00 39.07 4.04
327 328 0.322816 ACCACAATCTGCATCCGCTT 60.323 50.000 0.00 0.00 39.64 4.68
385 392 0.320946 ATCCACGTACCACAAACCCG 60.321 55.000 0.00 0.00 0.00 5.28
480 488 4.643387 GCAGACCGGGGCAACACT 62.643 66.667 6.32 0.00 38.54 3.55
497 505 4.460505 GAAACCATTACCGTTGAACGAAG 58.539 43.478 20.47 5.83 46.05 3.79
614 626 1.882912 TCACAACAGCAGCCACTAAG 58.117 50.000 0.00 0.00 0.00 2.18
617 629 1.521450 GCATCACAACAGCAGCCACT 61.521 55.000 0.00 0.00 0.00 4.00
652 664 3.381272 CCACTGAAATTGACACCAACACT 59.619 43.478 0.00 0.00 34.72 3.55
665 677 6.935167 ACAAAAGTGAAGAAACCACTGAAAT 58.065 32.000 0.00 0.00 43.42 2.17
666 678 6.339587 ACAAAAGTGAAGAAACCACTGAAA 57.660 33.333 0.00 0.00 43.42 2.69
667 679 5.975693 ACAAAAGTGAAGAAACCACTGAA 57.024 34.783 0.00 0.00 43.42 3.02
668 680 5.975693 AACAAAAGTGAAGAAACCACTGA 57.024 34.783 0.00 0.00 43.42 3.41
669 681 5.925969 ACAAACAAAAGTGAAGAAACCACTG 59.074 36.000 0.00 0.00 43.42 3.66
670 682 6.096673 ACAAACAAAAGTGAAGAAACCACT 57.903 33.333 0.00 0.00 45.88 4.00
671 683 8.474006 AATACAAACAAAAGTGAAGAAACCAC 57.526 30.769 0.00 0.00 34.89 4.16
672 684 9.495572 AAAATACAAACAAAAGTGAAGAAACCA 57.504 25.926 0.00 0.00 0.00 3.67
702 714 5.172205 GCACAAAGGAACACCAACTAAAAA 58.828 37.500 0.00 0.00 0.00 1.94
703 715 4.220821 TGCACAAAGGAACACCAACTAAAA 59.779 37.500 0.00 0.00 0.00 1.52
704 716 3.764434 TGCACAAAGGAACACCAACTAAA 59.236 39.130 0.00 0.00 0.00 1.85
705 717 3.357203 TGCACAAAGGAACACCAACTAA 58.643 40.909 0.00 0.00 0.00 2.24
706 718 3.006112 TGCACAAAGGAACACCAACTA 57.994 42.857 0.00 0.00 0.00 2.24
707 719 1.846007 TGCACAAAGGAACACCAACT 58.154 45.000 0.00 0.00 0.00 3.16
708 720 2.663826 TTGCACAAAGGAACACCAAC 57.336 45.000 0.00 0.00 0.00 3.77
709 721 3.244033 CTTTGCACAAAGGAACACCAA 57.756 42.857 14.08 0.00 42.96 3.67
710 722 2.957491 CTTTGCACAAAGGAACACCA 57.043 45.000 14.08 0.00 42.96 4.17
718 730 0.593128 ACGCTAGCCTTTGCACAAAG 59.407 50.000 14.79 14.79 45.47 2.77
719 731 1.028905 AACGCTAGCCTTTGCACAAA 58.971 45.000 9.66 0.00 41.13 2.83
720 732 1.028905 AAACGCTAGCCTTTGCACAA 58.971 45.000 9.66 0.00 41.13 3.33
721 733 1.028905 AAAACGCTAGCCTTTGCACA 58.971 45.000 9.66 0.00 41.13 4.57
722 734 2.225727 AGTAAAACGCTAGCCTTTGCAC 59.774 45.455 20.01 16.14 41.13 4.57
723 735 2.500229 AGTAAAACGCTAGCCTTTGCA 58.500 42.857 20.01 8.08 41.13 4.08
724 736 4.094442 ACATAGTAAAACGCTAGCCTTTGC 59.906 41.667 9.66 12.27 37.95 3.68
725 737 5.796350 ACATAGTAAAACGCTAGCCTTTG 57.204 39.130 9.66 7.16 0.00 2.77
726 738 6.704937 GGATACATAGTAAAACGCTAGCCTTT 59.295 38.462 9.66 11.49 0.00 3.11
727 739 6.183360 TGGATACATAGTAAAACGCTAGCCTT 60.183 38.462 9.66 0.31 46.17 4.35
728 740 5.303589 TGGATACATAGTAAAACGCTAGCCT 59.696 40.000 9.66 1.37 46.17 4.58
729 741 5.535333 TGGATACATAGTAAAACGCTAGCC 58.465 41.667 9.66 0.00 46.17 3.93
745 757 3.069586 CGGATCTAGCAAACCTGGATACA 59.930 47.826 0.00 0.00 41.26 2.29
746 758 3.069729 ACGGATCTAGCAAACCTGGATAC 59.930 47.826 0.00 0.00 41.31 2.24
747 759 3.069586 CACGGATCTAGCAAACCTGGATA 59.930 47.826 0.00 0.00 41.31 2.59
748 760 2.119495 ACGGATCTAGCAAACCTGGAT 58.881 47.619 0.00 0.00 43.61 3.41
749 761 1.207089 CACGGATCTAGCAAACCTGGA 59.793 52.381 0.00 0.00 35.37 3.86
750 762 1.066143 ACACGGATCTAGCAAACCTGG 60.066 52.381 0.00 0.00 0.00 4.45
751 763 2.002586 CACACGGATCTAGCAAACCTG 58.997 52.381 0.00 0.00 0.00 4.00
752 764 1.623811 ACACACGGATCTAGCAAACCT 59.376 47.619 0.00 0.00 0.00 3.50
753 765 2.094762 ACACACGGATCTAGCAAACC 57.905 50.000 0.00 0.00 0.00 3.27
754 766 2.597305 CGTACACACGGATCTAGCAAAC 59.403 50.000 0.00 0.00 44.59 2.93
755 767 2.871133 CGTACACACGGATCTAGCAAA 58.129 47.619 0.00 0.00 44.59 3.68
756 768 2.554806 CGTACACACGGATCTAGCAA 57.445 50.000 0.00 0.00 44.59 3.91
767 779 7.751047 ATCATAATACAAGTCACGTACACAC 57.249 36.000 0.00 0.00 0.00 3.82
768 780 8.248253 AGAATCATAATACAAGTCACGTACACA 58.752 33.333 0.00 0.00 0.00 3.72
769 781 8.630278 AGAATCATAATACAAGTCACGTACAC 57.370 34.615 0.00 0.00 0.00 2.90
791 803 9.442033 CGTGTATCGTTTGTATGATAGTAAGAA 57.558 33.333 0.00 0.00 33.89 2.52
792 804 8.998558 CGTGTATCGTTTGTATGATAGTAAGA 57.001 34.615 0.00 0.00 33.89 2.10
899 911 4.802051 GGCCAATGCTCTCCGCCA 62.802 66.667 0.00 0.00 39.50 5.69
911 923 2.354729 CGATTGGGTGGAGGCCAA 59.645 61.111 5.01 0.00 34.18 4.52
1126 1145 4.140599 AGAGGAAGCAGAGCCGCG 62.141 66.667 0.00 0.00 36.85 6.46
1354 1376 1.876473 AGAAGAGGGATCTATGGGGGT 59.124 52.381 0.00 0.00 0.00 4.95
1393 1415 2.848678 ACCATAGGACAGCAGGTAGA 57.151 50.000 0.00 0.00 0.00 2.59
1421 1443 3.830755 TCCCTAATTACACGAGCTATCCC 59.169 47.826 0.00 0.00 0.00 3.85
1619 2368 9.585099 TTAATTGCATCATTTCCACAATAGAAC 57.415 29.630 0.00 0.00 31.05 3.01
1714 2463 9.077885 GTTCTAGAGATTATCCATGTCTCTCTT 57.922 37.037 14.23 0.00 43.87 2.85
1774 2523 9.412460 AGTGCTTTATAATCCTGATTTGATCAA 57.588 29.630 3.38 3.38 39.11 2.57
1775 2524 8.985315 AGTGCTTTATAATCCTGATTTGATCA 57.015 30.769 0.00 0.00 37.76 2.92
1776 2525 9.674824 CAAGTGCTTTATAATCCTGATTTGATC 57.325 33.333 0.00 0.00 32.50 2.92
1777 2526 8.636213 CCAAGTGCTTTATAATCCTGATTTGAT 58.364 33.333 0.00 0.00 32.50 2.57
1782 2538 5.448654 TGCCAAGTGCTTTATAATCCTGAT 58.551 37.500 0.00 0.00 42.00 2.90
1843 2682 7.337167 AGATAGACAAGAGCACTTTTCATGAT 58.663 34.615 11.77 3.26 35.87 2.45
2506 3345 8.388484 AGAATAATACCAAGAGATTGTGATGC 57.612 34.615 0.00 0.00 0.00 3.91
2667 3506 6.319141 ACAAAAACTCTGCTGGATTTAGAC 57.681 37.500 0.00 0.00 0.00 2.59
2982 3821 5.678583 AGACCAGTGGATAGAAATGACATG 58.321 41.667 18.40 0.00 0.00 3.21
3081 3920 5.133941 TCTAGGCTGTGATAGTAGACCTTG 58.866 45.833 0.00 0.00 0.00 3.61
3240 4079 4.100498 ACCTTGTCGAAGTCCAAAGTAAGA 59.900 41.667 0.00 0.00 0.00 2.10
3347 4199 0.178990 AACAAGTGGAGGCTTGACCC 60.179 55.000 12.05 0.00 46.34 4.46
3355 4207 0.954452 GGTCAAGCAACAAGTGGAGG 59.046 55.000 0.00 0.00 0.00 4.30
3358 4210 1.008538 GCGGTCAAGCAACAAGTGG 60.009 57.895 0.00 0.00 37.05 4.00
3696 4590 5.415701 ACATACCGCAGTGAGAAAAATCAAT 59.584 36.000 0.00 0.00 0.00 2.57
3883 4777 3.532155 CCCCTCTCTTCCTCGCCG 61.532 72.222 0.00 0.00 0.00 6.46
3922 4816 5.408356 ACGTATGACATGAACCAAGTACTC 58.592 41.667 0.00 0.00 0.00 2.59
3950 4844 4.156190 AGAGCTGACAGCATCATGAAAAAG 59.844 41.667 28.43 0.00 45.56 2.27
4237 5132 2.095059 GCACCACCAGCTAACATTTCAG 60.095 50.000 0.00 0.00 0.00 3.02
4242 5137 0.401738 ACAGCACCACCAGCTAACAT 59.598 50.000 0.00 0.00 41.14 2.71
4245 5140 0.764890 AGAACAGCACCACCAGCTAA 59.235 50.000 0.00 0.00 41.14 3.09
4246 5141 0.035317 CAGAACAGCACCACCAGCTA 59.965 55.000 0.00 0.00 41.14 3.32
4247 5142 1.228063 CAGAACAGCACCACCAGCT 60.228 57.895 0.00 0.00 44.62 4.24
4248 5143 1.227943 TCAGAACAGCACCACCAGC 60.228 57.895 0.00 0.00 0.00 4.85
4249 5144 0.179048 TGTCAGAACAGCACCACCAG 60.179 55.000 0.00 0.00 0.00 4.00
4251 5146 0.463654 TGTGTCAGAACAGCACCACC 60.464 55.000 0.00 0.00 35.64 4.61
4252 5147 1.331756 CTTGTGTCAGAACAGCACCAC 59.668 52.381 0.00 0.00 35.64 4.16
4253 5148 1.209261 TCTTGTGTCAGAACAGCACCA 59.791 47.619 0.00 0.00 35.64 4.17
4254 5149 1.953559 TCTTGTGTCAGAACAGCACC 58.046 50.000 0.00 0.00 35.64 5.01
4255 5150 4.035558 TGATTTCTTGTGTCAGAACAGCAC 59.964 41.667 0.00 0.00 35.64 4.40
4256 5151 4.035558 GTGATTTCTTGTGTCAGAACAGCA 59.964 41.667 0.00 0.00 35.64 4.41
4257 5152 4.274459 AGTGATTTCTTGTGTCAGAACAGC 59.726 41.667 0.00 0.00 35.64 4.40
4258 5153 5.745514 CAGTGATTTCTTGTGTCAGAACAG 58.254 41.667 0.00 0.00 35.64 3.16
4370 6009 8.906636 TTTGTAAGACGTCATGTAAGAGATAC 57.093 34.615 19.50 0.00 34.92 2.24
4410 6049 3.629142 AGTAATTCCAAACGGAGGGAG 57.371 47.619 0.00 0.00 34.02 4.30
4411 6050 3.073356 ACAAGTAATTCCAAACGGAGGGA 59.927 43.478 0.00 0.00 32.88 4.20
4412 6051 3.418047 ACAAGTAATTCCAAACGGAGGG 58.582 45.455 0.00 0.00 32.88 4.30
4413 6052 4.069304 TGACAAGTAATTCCAAACGGAGG 58.931 43.478 0.00 0.00 32.88 4.30
4414 6053 4.513692 TGTGACAAGTAATTCCAAACGGAG 59.486 41.667 0.00 0.00 32.88 4.63
4415 6054 4.452825 TGTGACAAGTAATTCCAAACGGA 58.547 39.130 0.00 0.00 0.00 4.69
4416 6055 4.822036 TGTGACAAGTAATTCCAAACGG 57.178 40.909 0.00 0.00 0.00 4.44
4417 6056 7.513190 TTTTTGTGACAAGTAATTCCAAACG 57.487 32.000 0.00 0.00 0.00 3.60
4418 6057 8.334632 CCATTTTTGTGACAAGTAATTCCAAAC 58.665 33.333 0.00 0.00 0.00 2.93
4419 6058 8.260818 TCCATTTTTGTGACAAGTAATTCCAAA 58.739 29.630 0.00 0.00 0.00 3.28
4420 6059 7.786030 TCCATTTTTGTGACAAGTAATTCCAA 58.214 30.769 0.00 0.00 0.00 3.53
4421 6060 7.353414 TCCATTTTTGTGACAAGTAATTCCA 57.647 32.000 0.00 0.00 0.00 3.53
4422 6061 9.921637 TTATCCATTTTTGTGACAAGTAATTCC 57.078 29.630 0.00 0.00 0.00 3.01
4428 6067 9.054922 CCATTTTTATCCATTTTTGTGACAAGT 57.945 29.630 0.00 0.00 0.00 3.16
4429 6068 9.270640 TCCATTTTTATCCATTTTTGTGACAAG 57.729 29.630 0.00 0.00 0.00 3.16
4430 6069 9.790344 ATCCATTTTTATCCATTTTTGTGACAA 57.210 25.926 0.00 0.00 0.00 3.18
4431 6070 9.217278 CATCCATTTTTATCCATTTTTGTGACA 57.783 29.630 0.00 0.00 0.00 3.58
4432 6071 9.218440 ACATCCATTTTTATCCATTTTTGTGAC 57.782 29.630 0.00 0.00 0.00 3.67
4474 6113 9.553064 GTCCAAGAAATGAATGTATCTAGATGT 57.447 33.333 15.79 0.00 0.00 3.06
4475 6114 8.706936 CGTCCAAGAAATGAATGTATCTAGATG 58.293 37.037 15.79 0.00 0.00 2.90
4476 6115 8.642432 TCGTCCAAGAAATGAATGTATCTAGAT 58.358 33.333 10.73 10.73 0.00 1.98
4477 6116 8.007405 TCGTCCAAGAAATGAATGTATCTAGA 57.993 34.615 0.00 0.00 0.00 2.43
4478 6117 7.923344 ACTCGTCCAAGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
4479 6118 7.782049 ACTCGTCCAAGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
4480 6119 6.644347 ACTCGTCCAAGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
4481 6120 6.910536 ACTCGTCCAAGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
4482 6121 8.964476 ATTACTCGTCCAAGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
4483 6122 8.786826 AATTACTCGTCCAAGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
4484 6123 7.148239 GGAATTACTCGTCCAAGAAATGAATGT 60.148 37.037 0.00 0.00 33.79 2.71
4485 6124 7.189512 GGAATTACTCGTCCAAGAAATGAATG 58.810 38.462 0.00 0.00 33.79 2.67
4486 6125 6.037172 CGGAATTACTCGTCCAAGAAATGAAT 59.963 38.462 0.00 0.00 33.10 2.57
4487 6126 5.350365 CGGAATTACTCGTCCAAGAAATGAA 59.650 40.000 0.00 0.00 33.10 2.57
4488 6127 4.868171 CGGAATTACTCGTCCAAGAAATGA 59.132 41.667 0.00 0.00 33.10 2.57
4489 6128 4.868171 TCGGAATTACTCGTCCAAGAAATG 59.132 41.667 0.00 0.00 33.10 2.32
4490 6129 5.080969 TCGGAATTACTCGTCCAAGAAAT 57.919 39.130 0.00 0.00 33.10 2.17
4491 6130 4.524316 TCGGAATTACTCGTCCAAGAAA 57.476 40.909 0.00 0.00 33.10 2.52
4492 6131 4.240096 GTTCGGAATTACTCGTCCAAGAA 58.760 43.478 0.00 0.00 33.10 2.52
4493 6132 3.671433 CGTTCGGAATTACTCGTCCAAGA 60.671 47.826 0.00 0.00 33.10 3.02
4494 6133 2.597305 CGTTCGGAATTACTCGTCCAAG 59.403 50.000 0.00 0.00 33.10 3.61
4495 6134 2.598589 CGTTCGGAATTACTCGTCCAA 58.401 47.619 0.00 0.00 33.10 3.53
4496 6135 1.135315 CCGTTCGGAATTACTCGTCCA 60.135 52.381 5.19 0.00 33.10 4.02
4497 6136 1.133025 TCCGTTCGGAATTACTCGTCC 59.867 52.381 11.66 0.00 0.00 4.79
4498 6137 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
4499 6138 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
4500 6139 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
4501 6140 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
4502 6141 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4503 6142 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4504 6143 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4505 6144 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
4506 6145 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
4507 6146 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
4508 6147 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
4509 6148 1.020437 GTACTACTCCCTCCGTTCGG 58.980 60.000 4.74 4.74 0.00 4.30
4510 6149 2.035530 AGTACTACTCCCTCCGTTCG 57.964 55.000 0.00 0.00 0.00 3.95
4511 6150 4.149511 ACTAGTACTACTCCCTCCGTTC 57.850 50.000 0.00 0.00 0.00 3.95
4512 6151 4.582973 AACTAGTACTACTCCCTCCGTT 57.417 45.455 0.00 0.00 0.00 4.44
4513 6152 5.903198 ATAACTAGTACTACTCCCTCCGT 57.097 43.478 0.00 0.00 0.00 4.69
4514 6153 8.099537 TCATAATAACTAGTACTACTCCCTCCG 58.900 40.741 0.00 0.00 0.00 4.63
4515 6154 9.452287 CTCATAATAACTAGTACTACTCCCTCC 57.548 40.741 0.00 0.00 0.00 4.30
4551 6190 9.527157 TTGTTCCAATCCTCAGTTTATTGATAA 57.473 29.630 0.00 0.00 33.38 1.75
4736 6385 4.128925 TCAACATATGCTCTGTGAGTCC 57.871 45.455 1.58 0.00 31.39 3.85
4848 6498 3.791973 ACAGGAAACATTGCAACGAAA 57.208 38.095 0.00 0.00 0.00 3.46
4890 6540 7.988028 AGAAGCTACCATAACACCTTAAAGATC 59.012 37.037 0.00 0.00 0.00 2.75
4908 6558 5.215160 CCACAAATTTGACACAGAAGCTAC 58.785 41.667 24.64 0.00 0.00 3.58
5183 6837 2.168521 GGAGACGTGGATTCTGATTCCA 59.831 50.000 15.40 15.40 40.96 3.53
5184 6838 2.432510 AGGAGACGTGGATTCTGATTCC 59.567 50.000 10.87 10.87 0.00 3.01
5218 6872 5.546621 ACTTTGAGTAGTAGCTTTGACCA 57.453 39.130 0.00 0.00 0.00 4.02
5443 7097 0.819259 GGTGTCAAGCTGCAACTGGA 60.819 55.000 1.02 0.00 0.00 3.86
5494 7148 4.995487 GTGTAGGTCAAACTGTAGAAAGGG 59.005 45.833 0.00 0.00 0.00 3.95
5506 7160 5.762179 ATCTGAATGAGGTGTAGGTCAAA 57.238 39.130 0.00 0.00 0.00 2.69
5528 7182 7.348801 TCTGTAATAAGTAAAGGGGCTGGAATA 59.651 37.037 0.00 0.00 0.00 1.75
5642 7303 2.351924 GACAAGTCCAACCCAGCCCA 62.352 60.000 0.00 0.00 0.00 5.36
5643 7304 1.603739 GACAAGTCCAACCCAGCCC 60.604 63.158 0.00 0.00 0.00 5.19
5655 7316 1.071471 CCCGGCTCAAGTGACAAGT 59.929 57.895 0.00 0.00 0.00 3.16
5686 7347 5.303971 CCAGATATCCTTTCAGGCTGTAAG 58.696 45.833 22.59 22.59 34.61 2.34
5729 7391 1.003464 GCCCAGCCCAAAATGTTGAAT 59.997 47.619 0.00 0.00 36.83 2.57
5760 7422 8.519526 TGACAAGAATGTTGTTGTTTTAGTTCT 58.480 29.630 9.27 0.00 43.60 3.01
5770 7432 6.415702 CAAAAGCATGACAAGAATGTTGTTG 58.584 36.000 0.00 1.56 40.74 3.33
5780 7442 2.803956 CAAAGCCCAAAAGCATGACAAG 59.196 45.455 0.00 0.00 34.23 3.16
5781 7443 2.485124 CCAAAGCCCAAAAGCATGACAA 60.485 45.455 0.00 0.00 34.23 3.18
5787 7449 1.344191 AAGCCCAAAGCCCAAAAGCA 61.344 50.000 0.00 0.00 45.47 3.91
5829 7491 4.395959 AGCCCAAATATGCATGTTCTTG 57.604 40.909 10.16 5.18 0.00 3.02
5830 7492 4.467082 TGAAGCCCAAATATGCATGTTCTT 59.533 37.500 10.16 8.41 0.00 2.52
5976 7643 3.243805 CCACACTCCATGCACATTTTGAA 60.244 43.478 0.00 0.00 0.00 2.69
5996 7663 3.006752 GCCTGAAAAACAATCATGGACCA 59.993 43.478 0.00 0.00 0.00 4.02
6076 7747 4.998671 TGAGTTGATGCAACCAAAGAAA 57.001 36.364 6.67 0.00 44.49 2.52
6077 7748 4.998671 TTGAGTTGATGCAACCAAAGAA 57.001 36.364 6.67 0.00 44.49 2.52
6078 7749 5.769662 AGTATTGAGTTGATGCAACCAAAGA 59.230 36.000 13.86 3.45 44.49 2.52
6079 7750 6.017400 AGTATTGAGTTGATGCAACCAAAG 57.983 37.500 13.86 0.00 44.49 2.77
6231 7913 1.473677 CTCGGGCTCATGAAAATGCAA 59.526 47.619 6.95 0.00 0.00 4.08
6259 7941 0.809636 TGTCCCGTGCATAGCATTCG 60.810 55.000 0.00 0.00 41.91 3.34
6283 7965 1.073216 GACAGCCGACTCGTCACATG 61.073 60.000 0.00 0.00 0.00 3.21
6312 7995 2.178876 ATCGGACCGTCACAATGCCA 62.179 55.000 14.79 0.00 0.00 4.92
6333 8016 0.820482 TCTCACTCCGACGTGAACCA 60.820 55.000 0.00 0.00 42.80 3.67
6339 8022 1.566882 CGACAGTCTCACTCCGACGT 61.567 60.000 0.00 0.00 36.53 4.34
6341 8024 0.954449 TCCGACAGTCTCACTCCGAC 60.954 60.000 0.00 0.00 0.00 4.79
6342 8025 0.673956 CTCCGACAGTCTCACTCCGA 60.674 60.000 0.00 0.00 0.00 4.55
6343 8026 0.956410 ACTCCGACAGTCTCACTCCG 60.956 60.000 0.00 0.00 0.00 4.63
6344 8027 0.523966 CACTCCGACAGTCTCACTCC 59.476 60.000 0.00 0.00 30.26 3.85
6345 8028 1.466950 CTCACTCCGACAGTCTCACTC 59.533 57.143 0.00 0.00 30.26 3.51
6346 8029 1.072489 TCTCACTCCGACAGTCTCACT 59.928 52.381 0.00 0.00 30.26 3.41
6347 8030 1.198178 GTCTCACTCCGACAGTCTCAC 59.802 57.143 0.00 0.00 30.26 3.51
6348 8031 1.072489 AGTCTCACTCCGACAGTCTCA 59.928 52.381 0.00 0.00 30.26 3.27
6349 8032 1.816074 AGTCTCACTCCGACAGTCTC 58.184 55.000 0.00 0.00 30.26 3.36
6350 8033 1.883275 CAAGTCTCACTCCGACAGTCT 59.117 52.381 0.00 0.00 30.26 3.24
6351 8034 1.609555 ACAAGTCTCACTCCGACAGTC 59.390 52.381 0.00 0.00 30.26 3.51
6352 8035 1.693627 ACAAGTCTCACTCCGACAGT 58.306 50.000 0.00 0.00 34.67 3.55
6353 8036 2.162608 CCTACAAGTCTCACTCCGACAG 59.837 54.545 0.00 0.00 33.89 3.51
6354 8037 2.160205 CCTACAAGTCTCACTCCGACA 58.840 52.381 0.00 0.00 33.89 4.35
6414 8097 2.097038 CACAGAAAGGGAGCTCGCG 61.097 63.158 23.41 12.32 0.00 5.87
6416 8099 0.390472 GGACACAGAAAGGGAGCTCG 60.390 60.000 7.83 0.00 0.00 5.03
6418 8101 1.366319 ATGGACACAGAAAGGGAGCT 58.634 50.000 0.00 0.00 0.00 4.09
6522 8217 3.057337 ACCCCGGTGAAGTCTTCG 58.943 61.111 8.06 0.00 0.00 3.79
6539 8234 1.202371 CGCATAAGCCTAGGTCGTTCA 60.202 52.381 11.31 0.00 37.52 3.18
6541 8236 0.104304 CCGCATAAGCCTAGGTCGTT 59.896 55.000 11.31 4.59 37.52 3.85
6553 8249 2.278989 GTCCGCTACGCCGCATAA 60.279 61.111 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.