Multiple sequence alignment - TraesCS4B01G115800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G115800 chr4B 100.000 8469 0 0 1 8469 132341441 132332973 0.000000e+00 15640.0
1 TraesCS4B01G115800 chr4B 79.859 427 47 18 4619 5026 132855682 132855276 8.370000e-70 276.0
2 TraesCS4B01G115800 chr4B 84.674 261 36 4 5247 5505 132855021 132854763 3.030000e-64 257.0
3 TraesCS4B01G115800 chr4A 95.994 2696 57 15 2914 5578 487862038 487864713 0.000000e+00 4333.0
4 TraesCS4B01G115800 chr4A 95.779 2085 72 11 5671 7747 487864711 487866787 0.000000e+00 3349.0
5 TraesCS4B01G115800 chr4A 92.996 1385 60 15 929 2276 487859869 487861253 0.000000e+00 1986.0
6 TraesCS4B01G115800 chr4A 95.813 406 9 2 2399 2797 487861252 487861656 0.000000e+00 649.0
7 TraesCS4B01G115800 chr4A 80.747 696 94 30 2934 3620 486639789 486640453 2.730000e-139 507.0
8 TraesCS4B01G115800 chr4A 80.000 715 69 27 7747 8429 487866857 487867529 2.150000e-125 460.0
9 TraesCS4B01G115800 chr4A 85.441 261 35 3 5247 5505 486641236 486641495 1.400000e-67 268.0
10 TraesCS4B01G115800 chr4A 76.779 534 81 26 4518 5026 486640461 486640976 8.430000e-65 259.0
11 TraesCS4B01G115800 chr4A 96.203 79 2 1 1215 1292 297113775 297113853 2.480000e-25 128.0
12 TraesCS4B01G115800 chr4A 95.588 68 3 0 8250 8317 487867324 487867391 8.990000e-20 110.0
13 TraesCS4B01G115800 chr4D 95.026 2654 83 26 2915 5556 93848189 93845573 0.000000e+00 4124.0
14 TraesCS4B01G115800 chr4D 92.493 1372 79 8 5671 7041 93845546 93844198 0.000000e+00 1941.0
15 TraesCS4B01G115800 chr4D 91.661 1391 70 14 928 2276 93850238 93848852 0.000000e+00 1884.0
16 TraesCS4B01G115800 chr4D 84.637 716 66 18 7047 7747 93844093 93843407 0.000000e+00 673.0
17 TraesCS4B01G115800 chr4D 81.700 694 91 27 2934 3620 94262240 94261576 5.780000e-151 545.0
18 TraesCS4B01G115800 chr4D 94.237 295 11 3 2578 2870 93848711 93848421 6.030000e-121 446.0
19 TraesCS4B01G115800 chr4D 82.946 516 33 14 7747 8236 93843337 93842851 1.700000e-111 414.0
20 TraesCS4B01G115800 chr4D 83.386 319 31 10 4719 5026 94261240 94260933 8.370000e-70 276.0
21 TraesCS4B01G115800 chr4D 85.328 259 37 1 5247 5505 94260679 94260422 5.040000e-67 267.0
22 TraesCS4B01G115800 chr4D 92.697 178 11 1 8252 8429 93842864 93842689 1.090000e-63 255.0
23 TraesCS4B01G115800 chr4D 92.857 154 7 1 2399 2552 93848853 93848704 3.980000e-53 220.0
24 TraesCS4B01G115800 chr4D 96.947 131 3 1 2271 2400 674132 674262 1.430000e-52 219.0
25 TraesCS4B01G115800 chr4D 94.286 105 5 1 5577 5681 185820860 185820757 8.800000e-35 159.0
26 TraesCS4B01G115800 chr4D 93.519 108 5 2 5567 5673 230489532 230489638 8.800000e-35 159.0
27 TraesCS4B01G115800 chr1B 91.753 873 59 9 1 861 95361848 95360977 0.000000e+00 1201.0
28 TraesCS4B01G115800 chr1B 95.588 136 6 0 2272 2407 38109455 38109590 1.430000e-52 219.0
29 TraesCS4B01G115800 chr1B 94.231 104 6 0 5571 5674 632006737 632006840 8.800000e-35 159.0
30 TraesCS4B01G115800 chr1B 90.196 51 3 2 817 867 315821871 315821823 1.970000e-06 65.8
31 TraesCS4B01G115800 chr3B 91.419 874 63 4 1 864 275892738 275891867 0.000000e+00 1188.0
32 TraesCS4B01G115800 chr3B 95.556 135 5 1 2267 2400 526489435 526489569 1.850000e-51 215.0
33 TraesCS4B01G115800 chr3B 91.391 151 10 3 2252 2400 778740104 778739955 4.010000e-48 204.0
34 TraesCS4B01G115800 chr5D 88.636 880 87 4 1 867 246280235 246279356 0.000000e+00 1059.0
35 TraesCS4B01G115800 chr5D 88.343 875 88 7 6 867 451888299 451887426 0.000000e+00 1038.0
36 TraesCS4B01G115800 chr2D 87.941 879 93 11 1 867 414993637 414994514 0.000000e+00 1024.0
37 TraesCS4B01G115800 chr2D 80.514 662 104 22 2933 3582 433503414 433504062 1.280000e-132 484.0
38 TraesCS4B01G115800 chr2D 81.667 300 46 7 5164 5458 433505893 433506188 3.050000e-59 241.0
39 TraesCS4B01G115800 chr7D 87.429 875 95 9 6 867 418391750 418392622 0.000000e+00 992.0
40 TraesCS4B01G115800 chr7D 84.217 773 115 7 6 776 213370422 213371189 0.000000e+00 745.0
41 TraesCS4B01G115800 chr6D 89.660 735 76 0 1 735 34515586 34514852 0.000000e+00 937.0
42 TraesCS4B01G115800 chr6D 82.333 883 131 16 1 861 82245607 82246486 0.000000e+00 743.0
43 TraesCS4B01G115800 chr2A 80.455 660 107 20 2933 3582 553489981 553489334 1.280000e-132 484.0
44 TraesCS4B01G115800 chr2A 87.755 196 21 3 5264 5458 553487385 553487192 8.550000e-55 226.0
45 TraesCS4B01G115800 chr2A 96.000 100 4 0 5577 5676 689713878 689713779 6.800000e-36 163.0
46 TraesCS4B01G115800 chr2A 95.098 102 5 0 5577 5678 681093498 681093397 2.450000e-35 161.0
47 TraesCS4B01G115800 chr2A 96.203 79 2 1 1215 1292 122823443 122823365 2.480000e-25 128.0
48 TraesCS4B01G115800 chr2A 96.203 79 2 1 1215 1292 489255265 489255187 2.480000e-25 128.0
49 TraesCS4B01G115800 chr2B 79.032 620 97 20 2934 3538 511273381 511273982 2.220000e-105 394.0
50 TraesCS4B01G115800 chr2B 87.864 206 20 4 5254 5458 511276010 511276211 3.950000e-58 237.0
51 TraesCS4B01G115800 chr2B 98.438 128 1 1 2274 2400 71834171 71834044 3.080000e-54 224.0
52 TraesCS4B01G115800 chr2B 96.992 133 2 2 2270 2400 547962619 547962487 1.110000e-53 222.0
53 TraesCS4B01G115800 chr2B 96.000 100 4 0 5577 5676 440223767 440223866 6.800000e-36 163.0
54 TraesCS4B01G115800 chrUn 83.493 418 59 9 3021 3433 477061841 477062253 1.730000e-101 381.0
55 TraesCS4B01G115800 chrUn 91.391 151 10 3 2252 2400 191163457 191163308 4.010000e-48 204.0
56 TraesCS4B01G115800 chr3D 93.750 144 5 4 2264 2404 540566687 540566545 6.660000e-51 213.0
57 TraesCS4B01G115800 chr3D 96.078 102 4 0 5573 5674 487125243 487125344 5.260000e-37 167.0
58 TraesCS4B01G115800 chr7B 94.161 137 6 2 2268 2402 48470431 48470295 3.100000e-49 207.0
59 TraesCS4B01G115800 chr5B 96.078 102 4 0 5576 5677 685439356 685439255 5.260000e-37 167.0
60 TraesCS4B01G115800 chr1D 96.040 101 4 0 5576 5676 433922674 433922774 1.890000e-36 165.0
61 TraesCS4B01G115800 chr6A 94.872 78 3 1 1215 1291 384559101 384559024 4.150000e-23 121.0
62 TraesCS4B01G115800 chr3A 95.833 72 3 0 1221 1292 706160996 706161067 5.370000e-22 117.0
63 TraesCS4B01G115800 chr3A 93.506 77 4 1 1215 1290 694218765 694218841 6.950000e-21 113.0
64 TraesCS4B01G115800 chr7A 85.135 74 2 3 1219 1292 727983319 727983383 5.490000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G115800 chr4B 132332973 132341441 8468 True 15640.000000 15640 100.000000 1 8469 1 chr4B.!!$R1 8468
1 TraesCS4B01G115800 chr4B 132854763 132855682 919 True 266.500000 276 82.266500 4619 5505 2 chr4B.!!$R2 886
2 TraesCS4B01G115800 chr4A 487859869 487867529 7660 False 1814.500000 4333 92.695000 929 8429 6 chr4A.!!$F3 7500
3 TraesCS4B01G115800 chr4A 486639789 486641495 1706 False 344.666667 507 80.989000 2934 5505 3 chr4A.!!$F2 2571
4 TraesCS4B01G115800 chr4D 93842689 93850238 7549 True 1244.625000 4124 90.819250 928 8429 8 chr4D.!!$R2 7501
5 TraesCS4B01G115800 chr4D 94260422 94262240 1818 True 362.666667 545 83.471333 2934 5505 3 chr4D.!!$R3 2571
6 TraesCS4B01G115800 chr1B 95360977 95361848 871 True 1201.000000 1201 91.753000 1 861 1 chr1B.!!$R1 860
7 TraesCS4B01G115800 chr3B 275891867 275892738 871 True 1188.000000 1188 91.419000 1 864 1 chr3B.!!$R1 863
8 TraesCS4B01G115800 chr5D 246279356 246280235 879 True 1059.000000 1059 88.636000 1 867 1 chr5D.!!$R1 866
9 TraesCS4B01G115800 chr5D 451887426 451888299 873 True 1038.000000 1038 88.343000 6 867 1 chr5D.!!$R2 861
10 TraesCS4B01G115800 chr2D 414993637 414994514 877 False 1024.000000 1024 87.941000 1 867 1 chr2D.!!$F1 866
11 TraesCS4B01G115800 chr2D 433503414 433506188 2774 False 362.500000 484 81.090500 2933 5458 2 chr2D.!!$F2 2525
12 TraesCS4B01G115800 chr7D 418391750 418392622 872 False 992.000000 992 87.429000 6 867 1 chr7D.!!$F2 861
13 TraesCS4B01G115800 chr7D 213370422 213371189 767 False 745.000000 745 84.217000 6 776 1 chr7D.!!$F1 770
14 TraesCS4B01G115800 chr6D 34514852 34515586 734 True 937.000000 937 89.660000 1 735 1 chr6D.!!$R1 734
15 TraesCS4B01G115800 chr6D 82245607 82246486 879 False 743.000000 743 82.333000 1 861 1 chr6D.!!$F1 860
16 TraesCS4B01G115800 chr2A 553487192 553489981 2789 True 355.000000 484 84.105000 2933 5458 2 chr2A.!!$R5 2525
17 TraesCS4B01G115800 chr2B 511273381 511276211 2830 False 315.500000 394 83.448000 2934 5458 2 chr2B.!!$F2 2524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
513 516 0.036010 CGGAGGACTGTTTGCTGGAT 60.036 55.0 0.00 0.00 0.00 3.41 F
1382 1416 0.107017 CTGCCAATTGAGGGATCCGT 60.107 55.0 6.67 6.67 0.00 4.69 F
2290 2357 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.0 0.00 0.00 42.90 5.14 F
2296 2363 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 F
2408 2475 0.741221 CGGAGGGAGTAGCAACTTGC 60.741 60.0 5.55 5.55 45.46 4.01 F
3732 4107 0.814457 AAAGCCACGTTTTCTGCACA 59.186 45.0 0.00 0.00 0.00 4.57 F
5591 6888 0.042131 ATGGTACTCCCTCCGTTCCA 59.958 55.0 0.00 0.00 36.47 3.53 F
5592 6889 0.178926 TGGTACTCCCTCCGTTCCAA 60.179 55.0 0.00 0.00 30.28 3.53 F
6368 7666 0.976641 TGAGCACTAGTGTTCTGGGG 59.023 55.0 31.60 4.92 40.76 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2277 2344 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
2390 2457 0.324943 TGCAAGTTGCTACTCCCTCC 59.675 55.000 27.17 0.00 45.31 4.30 R
3611 3986 1.269998 GAGACCCCGGATATTCTGTCG 59.730 57.143 0.73 0.00 0.00 4.35 R
3880 4258 2.522185 AGGCATGTTTGATTCACAGCT 58.478 42.857 0.00 0.00 0.00 4.24 R
4121 4507 4.202556 TGGACAAGTCAATTCTTGATGGGA 60.203 41.667 12.48 0.00 45.11 4.37 R
5657 6954 1.203087 TCAACTACTCCCTCCGTTCCA 60.203 52.381 0.00 0.00 0.00 3.53 R
6914 8213 0.038744 CCTTTCAGGGTCATGCTGGT 59.961 55.000 0.00 0.00 0.00 4.00 R
6922 8221 0.962855 GAGCCTTGCCTTTCAGGGTC 60.963 60.000 1.84 1.84 43.37 4.46 R
7666 9075 0.107945 AGCTCTTTCCATGGACGAGC 60.108 55.000 36.10 36.10 42.90 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
164 165 2.930826 TCCAGCGAAGACTCCTTTTT 57.069 45.000 0.00 0.00 31.62 1.94
194 195 2.630098 CGGACCCATCTGACAGATACAT 59.370 50.000 17.54 5.98 32.12 2.29
221 222 6.486657 GCCAAGTCAACATATTATAGGCTCAA 59.513 38.462 0.00 0.00 35.63 3.02
230 231 7.297614 ACATATTATAGGCTCAATTTGGGTGT 58.702 34.615 13.11 0.00 0.00 4.16
271 272 4.458397 CTCATGCATATGGAAGAGTTGGT 58.542 43.478 18.17 0.00 34.97 3.67
285 286 0.765510 GTTGGTCCCTCCTCAAGTGT 59.234 55.000 0.00 0.00 37.07 3.55
343 345 1.068287 GACGTCTGACAGAAGAGCGC 61.068 60.000 22.90 0.00 0.00 5.92
345 347 1.210413 GTCTGACAGAAGAGCGCGA 59.790 57.895 12.10 0.00 0.00 5.87
406 408 3.706698 CTTCAAGAGGATGATAACGCGA 58.293 45.455 15.93 0.00 0.00 5.87
427 429 4.671377 GAAACACATTCTTGTTCAGTGCA 58.329 39.130 0.00 0.00 38.82 4.57
468 470 2.541762 GCACTACATCTTCGAGGCATTC 59.458 50.000 0.00 0.00 0.00 2.67
513 516 0.036010 CGGAGGACTGTTTGCTGGAT 60.036 55.000 0.00 0.00 0.00 3.41
560 563 1.371558 GGAAGGACTCCAAGCGTGT 59.628 57.895 0.00 0.00 44.67 4.49
645 648 2.609984 CCATCGGACTCATCAGCAGATC 60.610 54.545 0.00 0.00 30.20 2.75
660 663 2.809446 CAGATCACGACGCCAGAATTA 58.191 47.619 0.00 0.00 0.00 1.40
763 766 6.895782 AGTGTAGGCATAGGCTAATTTGTAA 58.104 36.000 0.00 0.00 42.17 2.41
770 773 5.588648 GCATAGGCTAATTTGTAAGGTGTGA 59.411 40.000 0.00 0.00 36.96 3.58
788 797 0.462047 GATAGGGTGTGCGTCCTTGG 60.462 60.000 0.00 0.00 34.75 3.61
812 828 5.867716 GTGGAAGCGATCTTTAACACTCTTA 59.132 40.000 0.00 0.00 33.21 2.10
865 886 3.165498 GCCTTTGGCGTACACTCG 58.835 61.111 0.00 0.00 39.62 4.18
866 887 1.373748 GCCTTTGGCGTACACTCGA 60.374 57.895 0.00 0.00 39.62 4.04
867 888 1.352156 GCCTTTGGCGTACACTCGAG 61.352 60.000 11.84 11.84 39.62 4.04
868 889 0.736325 CCTTTGGCGTACACTCGAGG 60.736 60.000 18.41 8.36 0.00 4.63
869 890 0.242825 CTTTGGCGTACACTCGAGGA 59.757 55.000 18.41 0.00 0.00 3.71
870 891 0.675083 TTTGGCGTACACTCGAGGAA 59.325 50.000 18.41 0.00 0.00 3.36
871 892 0.675083 TTGGCGTACACTCGAGGAAA 59.325 50.000 18.41 0.00 0.00 3.13
872 893 0.242825 TGGCGTACACTCGAGGAAAG 59.757 55.000 18.41 6.15 0.00 2.62
873 894 0.524862 GGCGTACACTCGAGGAAAGA 59.475 55.000 18.41 0.00 0.00 2.52
874 895 1.068055 GGCGTACACTCGAGGAAAGAA 60.068 52.381 18.41 0.00 0.00 2.52
875 896 2.608752 GGCGTACACTCGAGGAAAGAAA 60.609 50.000 18.41 0.00 0.00 2.52
876 897 3.054878 GCGTACACTCGAGGAAAGAAAA 58.945 45.455 18.41 0.00 0.00 2.29
877 898 3.121445 GCGTACACTCGAGGAAAGAAAAG 59.879 47.826 18.41 0.12 0.00 2.27
878 899 4.543692 CGTACACTCGAGGAAAGAAAAGA 58.456 43.478 18.41 0.00 0.00 2.52
879 900 4.382160 CGTACACTCGAGGAAAGAAAAGAC 59.618 45.833 18.41 0.00 0.00 3.01
880 901 4.402056 ACACTCGAGGAAAGAAAAGACA 57.598 40.909 18.41 0.00 0.00 3.41
881 902 4.766375 ACACTCGAGGAAAGAAAAGACAA 58.234 39.130 18.41 0.00 0.00 3.18
882 903 5.368989 ACACTCGAGGAAAGAAAAGACAAT 58.631 37.500 18.41 0.00 0.00 2.71
883 904 5.467063 ACACTCGAGGAAAGAAAAGACAATC 59.533 40.000 18.41 0.00 0.00 2.67
884 905 5.698545 CACTCGAGGAAAGAAAAGACAATCT 59.301 40.000 18.41 0.00 0.00 2.40
885 906 6.868864 CACTCGAGGAAAGAAAAGACAATCTA 59.131 38.462 18.41 0.00 0.00 1.98
886 907 7.062839 CACTCGAGGAAAGAAAAGACAATCTAG 59.937 40.741 18.41 0.00 0.00 2.43
887 908 7.039644 ACTCGAGGAAAGAAAAGACAATCTAGA 60.040 37.037 18.41 0.00 0.00 2.43
888 909 7.316640 TCGAGGAAAGAAAAGACAATCTAGAG 58.683 38.462 0.00 0.00 0.00 2.43
889 910 7.176865 TCGAGGAAAGAAAAGACAATCTAGAGA 59.823 37.037 0.00 0.00 0.00 3.10
890 911 7.815068 CGAGGAAAGAAAAGACAATCTAGAGAA 59.185 37.037 0.00 0.00 0.00 2.87
891 912 9.665719 GAGGAAAGAAAAGACAATCTAGAGAAT 57.334 33.333 0.00 0.00 0.00 2.40
984 1005 0.881118 TGGCCAGCGAATCAAAGTTC 59.119 50.000 0.00 0.00 0.00 3.01
1026 1047 2.174424 CCTAGTAGAACCCCGGTAGAGT 59.826 54.545 0.00 0.00 0.00 3.24
1045 1066 0.325602 TCGCGGGTAAAAAGGTGGAT 59.674 50.000 6.13 0.00 0.00 3.41
1074 1095 2.332654 GGTGACACATCAACCGGCC 61.333 63.158 0.00 0.00 36.44 6.13
1264 1298 0.605589 ACCCTGCGCCAAACTACTTC 60.606 55.000 4.18 0.00 0.00 3.01
1292 1326 1.829849 CTCAGGTTCTGCTCTGATCCA 59.170 52.381 0.00 0.00 39.04 3.41
1295 1329 3.118482 TCAGGTTCTGCTCTGATCCAATC 60.118 47.826 0.00 0.00 35.37 2.67
1382 1416 0.107017 CTGCCAATTGAGGGATCCGT 60.107 55.000 6.67 6.67 0.00 4.69
1407 1441 0.462759 GGAAGCTCACCTCGGGATTG 60.463 60.000 0.00 0.00 0.00 2.67
1481 1515 5.462398 CGTAGTTGTTGAGCTGAACTTACTT 59.538 40.000 21.78 11.41 32.27 2.24
1487 1521 3.141398 TGAGCTGAACTTACTTGCTTGG 58.859 45.455 0.00 0.00 33.83 3.61
1552 1586 5.575218 CCGGTAAATTCATGTTTTTAGGTGC 59.425 40.000 0.00 0.00 0.00 5.01
1620 1656 6.238759 GGGCCAATGCTAATACTGAGTTTTAG 60.239 42.308 15.57 15.57 37.74 1.85
1627 1663 9.771534 ATGCTAATACTGAGTTTTAGAGGATTC 57.228 33.333 21.67 7.58 31.84 2.52
1633 1669 3.846588 TGAGTTTTAGAGGATTCCTGCCT 59.153 43.478 10.74 4.50 38.81 4.75
1637 1673 3.652057 TTAGAGGATTCCTGCCTTTGG 57.348 47.619 10.74 0.00 35.44 3.28
1710 1747 1.751924 TGCAGTGGGGTTTTGTGTTAC 59.248 47.619 0.00 0.00 0.00 2.50
1731 1768 2.673368 CTGTCGGTCAAACTTATGAGCC 59.327 50.000 1.39 0.00 43.22 4.70
1832 1895 5.653255 AGCCAGGATAACACCTTCATAAT 57.347 39.130 0.00 0.00 38.32 1.28
1879 1942 4.660771 AGTCCCCTACAATTTCATCTAGGG 59.339 45.833 2.04 2.04 43.74 3.53
1892 1955 3.112263 CATCTAGGGTTCCAGGGTTACA 58.888 50.000 0.00 0.00 0.00 2.41
1911 1974 6.260271 GGTTACATACTCAAGTGGGCTTTATC 59.740 42.308 0.00 0.00 31.49 1.75
1917 1982 4.472833 ACTCAAGTGGGCTTTATCTGAGAT 59.527 41.667 0.00 0.00 31.49 2.75
1956 2021 4.819630 GGTGGTTTGAGATTTGTACACTCA 59.180 41.667 9.87 9.87 38.61 3.41
2281 2348 7.898014 AAACTTGAAAGAACAAATACTCCCT 57.102 32.000 0.00 0.00 0.00 4.20
2282 2349 7.511959 AACTTGAAAGAACAAATACTCCCTC 57.488 36.000 0.00 0.00 0.00 4.30
2283 2350 6.004574 ACTTGAAAGAACAAATACTCCCTCC 58.995 40.000 0.00 0.00 0.00 4.30
2284 2351 4.575885 TGAAAGAACAAATACTCCCTCCG 58.424 43.478 0.00 0.00 0.00 4.63
2285 2352 4.041198 TGAAAGAACAAATACTCCCTCCGT 59.959 41.667 0.00 0.00 0.00 4.69
2286 2353 3.889520 AGAACAAATACTCCCTCCGTC 57.110 47.619 0.00 0.00 0.00 4.79
2287 2354 2.500504 AGAACAAATACTCCCTCCGTCC 59.499 50.000 0.00 0.00 0.00 4.79
2288 2355 0.822164 ACAAATACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
2289 2356 0.104304 CAAATACTCCCTCCGTCCGG 59.896 60.000 0.00 0.00 0.00 5.14
2290 2357 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
2291 2358 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
2292 2359 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2293 2360 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2294 2361 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2295 2362 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2296 2363 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2297 2364 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2298 2365 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2299 2366 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2300 2367 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2301 2368 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2302 2369 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2303 2370 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2304 2371 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2305 2372 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2306 2373 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2307 2374 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2308 2375 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2309 2376 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2310 2377 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2311 2378 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2312 2379 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2320 2387 9.918630 ACTTGTCATCAAAATGAATAAAAGAGG 57.081 29.630 0.00 0.00 43.42 3.69
2366 2433 9.965902 AGTTCTAGATACATTTCTTTTGTCCAT 57.034 29.630 0.00 0.00 0.00 3.41
2375 2442 8.369218 ACATTTCTTTTGTCCATTTTGATGAC 57.631 30.769 0.00 0.00 0.00 3.06
2376 2443 7.986320 ACATTTCTTTTGTCCATTTTGATGACA 59.014 29.630 0.00 0.00 0.00 3.58
2377 2444 8.828644 CATTTCTTTTGTCCATTTTGATGACAA 58.171 29.630 0.00 0.00 34.47 3.18
2378 2445 8.422973 TTTCTTTTGTCCATTTTGATGACAAG 57.577 30.769 0.00 0.00 37.13 3.16
2379 2446 7.111247 TCTTTTGTCCATTTTGATGACAAGT 57.889 32.000 0.00 0.00 37.13 3.16
2380 2447 8.231692 TCTTTTGTCCATTTTGATGACAAGTA 57.768 30.769 0.00 0.00 37.13 2.24
2381 2448 8.859090 TCTTTTGTCCATTTTGATGACAAGTAT 58.141 29.630 0.00 0.00 37.13 2.12
2382 2449 9.480053 CTTTTGTCCATTTTGATGACAAGTATT 57.520 29.630 0.00 0.00 37.13 1.89
2383 2450 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
2384 2451 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
2385 2452 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
2386 2453 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
2387 2454 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
2388 2455 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2389 2456 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2390 2457 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2391 2458 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2392 2459 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2393 2460 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2394 2461 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2395 2462 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2396 2463 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2397 2464 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2398 2465 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2399 2466 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2408 2475 0.741221 CGGAGGGAGTAGCAACTTGC 60.741 60.000 5.55 5.55 45.46 4.01
2739 2808 8.607441 AATGTGTATATGTACATGCCTAGTTG 57.393 34.615 18.81 0.00 42.43 3.16
2740 2809 7.119709 TGTGTATATGTACATGCCTAGTTGT 57.880 36.000 18.81 0.00 42.43 3.32
2741 2810 8.240267 TGTGTATATGTACATGCCTAGTTGTA 57.760 34.615 18.81 0.00 42.43 2.41
2742 2811 8.139350 TGTGTATATGTACATGCCTAGTTGTAC 58.861 37.037 18.81 15.63 45.36 2.90
2816 2896 9.569167 GGGCAAATAAAAGTTACTAAAGCTTAG 57.431 33.333 0.00 0.20 0.00 2.18
2860 2940 7.737395 TGTTTGTTGTTTTGCACTTAGATTTG 58.263 30.769 0.00 0.00 0.00 2.32
2892 2972 8.986929 ATATGAAAAGAAGAATCTTAGGGGTG 57.013 34.615 0.00 0.00 45.19 4.61
2893 2973 5.570320 TGAAAAGAAGAATCTTAGGGGTGG 58.430 41.667 0.00 0.00 45.19 4.61
2894 2974 4.592997 AAAGAAGAATCTTAGGGGTGGG 57.407 45.455 0.00 0.00 45.19 4.61
2895 2975 2.493091 AGAAGAATCTTAGGGGTGGGG 58.507 52.381 0.00 0.00 29.15 4.96
2896 2976 1.495148 GAAGAATCTTAGGGGTGGGGG 59.505 57.143 0.00 0.00 0.00 5.40
3259 3614 1.494960 AGATCTGGGAGTGAGGCTTC 58.505 55.000 0.00 0.00 0.00 3.86
3456 3826 6.926280 TGTTTCATCGTCAACAATATTTGC 57.074 33.333 0.00 0.00 29.81 3.68
3732 4107 0.814457 AAAGCCACGTTTTCTGCACA 59.186 45.000 0.00 0.00 0.00 4.57
3880 4258 7.418337 TGCCTGACATCTTATACAGTCTTAA 57.582 36.000 0.00 0.00 32.41 1.85
3948 4326 3.769739 ATCTGGAACAAGCACTGTACA 57.230 42.857 0.00 0.00 37.23 2.90
4121 4507 4.931002 GTCATGTGGCAATTTAAGCATTGT 59.069 37.500 0.00 0.00 36.63 2.71
4298 4691 4.782019 TGTGTACATTGATTTTCAGCCC 57.218 40.909 0.00 0.00 0.00 5.19
4546 5160 4.637534 CCCCAGTGTTAGACTCATTGATTG 59.362 45.833 0.00 0.00 29.75 2.67
4670 5293 6.969993 TTTTGTTTAGGCCTTTATGTGTCT 57.030 33.333 12.58 0.00 0.00 3.41
4671 5294 6.969993 TTTGTTTAGGCCTTTATGTGTCTT 57.030 33.333 12.58 0.00 0.00 3.01
4672 5295 6.969993 TTGTTTAGGCCTTTATGTGTCTTT 57.030 33.333 12.58 0.00 0.00 2.52
4673 5296 8.466617 TTTGTTTAGGCCTTTATGTGTCTTTA 57.533 30.769 12.58 0.00 0.00 1.85
4674 5297 7.443259 TGTTTAGGCCTTTATGTGTCTTTAC 57.557 36.000 12.58 0.00 0.00 2.01
4675 5298 6.431852 TGTTTAGGCCTTTATGTGTCTTTACC 59.568 38.462 12.58 0.00 0.00 2.85
4676 5299 3.964411 AGGCCTTTATGTGTCTTTACCC 58.036 45.455 0.00 0.00 0.00 3.69
4700 5323 7.147846 CCCTTTAGAATACTTGCACCATGAAAT 60.148 37.037 0.00 0.00 0.00 2.17
5025 5808 1.406539 GCTGCCACCCATATGTGAAAG 59.593 52.381 1.24 0.00 38.55 2.62
5026 5809 2.726821 CTGCCACCCATATGTGAAAGT 58.273 47.619 1.24 0.00 38.55 2.66
5027 5810 2.424601 CTGCCACCCATATGTGAAAGTG 59.575 50.000 1.24 1.73 38.55 3.16
5028 5811 2.040947 TGCCACCCATATGTGAAAGTGA 59.959 45.455 1.24 0.00 38.55 3.41
5029 5812 3.088532 GCCACCCATATGTGAAAGTGAA 58.911 45.455 1.24 0.00 38.55 3.18
5030 5813 3.509575 GCCACCCATATGTGAAAGTGAAA 59.490 43.478 1.24 0.00 38.55 2.69
5074 5858 6.594159 GCTGTCACTTTTAGGCAGTATTCTAA 59.406 38.462 0.00 0.00 0.00 2.10
5101 5885 4.273005 AGTTTGCTGTCACTTGTAAACG 57.727 40.909 8.48 0.00 41.37 3.60
5155 6057 3.470709 TCTTGTTCAGTTCTGCAGAAGG 58.529 45.455 29.13 22.68 34.27 3.46
5222 6503 6.997655 TGTGGCATACAATTTGTTATTTGGA 58.002 32.000 7.45 0.00 36.06 3.53
5467 6756 6.655003 TGACACTGTCTTGATATTCCTTTTCC 59.345 38.462 10.54 0.00 33.15 3.13
5556 6846 5.680619 ACAGTCGATGCATTTTATTCCCTA 58.319 37.500 0.00 0.00 0.00 3.53
5558 6848 6.038271 ACAGTCGATGCATTTTATTCCCTAAC 59.962 38.462 0.00 0.00 0.00 2.34
5575 6872 5.046591 TCCCTAACTACTGTGACAGAAATGG 60.047 44.000 20.97 12.23 35.18 3.16
5576 6873 5.280011 CCCTAACTACTGTGACAGAAATGGT 60.280 44.000 20.97 1.97 35.18 3.55
5577 6874 6.070995 CCCTAACTACTGTGACAGAAATGGTA 60.071 42.308 20.97 7.83 35.18 3.25
5578 6875 6.812160 CCTAACTACTGTGACAGAAATGGTAC 59.188 42.308 20.97 0.00 35.18 3.34
5579 6876 6.420913 AACTACTGTGACAGAAATGGTACT 57.579 37.500 20.97 0.00 35.18 2.73
5580 6877 6.026947 ACTACTGTGACAGAAATGGTACTC 57.973 41.667 20.97 0.00 35.18 2.59
5581 6878 4.273148 ACTGTGACAGAAATGGTACTCC 57.727 45.455 20.97 0.00 35.18 3.85
5582 6879 3.008049 ACTGTGACAGAAATGGTACTCCC 59.992 47.826 20.97 0.00 35.18 4.30
5583 6880 3.248024 TGTGACAGAAATGGTACTCCCT 58.752 45.455 0.00 0.00 0.00 4.20
5584 6881 3.260884 TGTGACAGAAATGGTACTCCCTC 59.739 47.826 0.00 0.00 0.00 4.30
5585 6882 2.838202 TGACAGAAATGGTACTCCCTCC 59.162 50.000 0.00 0.00 0.00 4.30
5586 6883 1.831736 ACAGAAATGGTACTCCCTCCG 59.168 52.381 0.00 0.00 0.00 4.63
5587 6884 1.831736 CAGAAATGGTACTCCCTCCGT 59.168 52.381 0.00 0.00 0.00 4.69
5588 6885 2.236395 CAGAAATGGTACTCCCTCCGTT 59.764 50.000 0.00 0.00 34.83 4.44
5589 6886 2.500504 AGAAATGGTACTCCCTCCGTTC 59.499 50.000 0.00 0.00 32.55 3.95
5590 6887 1.201424 AATGGTACTCCCTCCGTTCC 58.799 55.000 0.00 0.00 0.00 3.62
5591 6888 0.042131 ATGGTACTCCCTCCGTTCCA 59.958 55.000 0.00 0.00 36.47 3.53
5592 6889 0.178926 TGGTACTCCCTCCGTTCCAA 60.179 55.000 0.00 0.00 30.28 3.53
5593 6890 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
5594 6891 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
5595 6892 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
5596 6893 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
5597 6894 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
5598 6895 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
5599 6896 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
5600 6897 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
5601 6898 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
5602 6899 4.412199 TCCCTCCGTTCCAAAATAGATGAT 59.588 41.667 0.00 0.00 0.00 2.45
5603 6900 5.104109 TCCCTCCGTTCCAAAATAGATGATT 60.104 40.000 0.00 0.00 0.00 2.57
5604 6901 5.239525 CCCTCCGTTCCAAAATAGATGATTC 59.760 44.000 0.00 0.00 0.00 2.52
5605 6902 5.822519 CCTCCGTTCCAAAATAGATGATTCA 59.177 40.000 0.00 0.00 0.00 2.57
5606 6903 6.318648 CCTCCGTTCCAAAATAGATGATTCAA 59.681 38.462 0.00 0.00 0.00 2.69
5607 6904 7.083875 TCCGTTCCAAAATAGATGATTCAAC 57.916 36.000 0.00 0.00 0.00 3.18
5608 6905 6.884295 TCCGTTCCAAAATAGATGATTCAACT 59.116 34.615 1.83 1.83 0.00 3.16
5609 6906 7.393234 TCCGTTCCAAAATAGATGATTCAACTT 59.607 33.333 1.47 0.00 0.00 2.66
5610 6907 8.028938 CCGTTCCAAAATAGATGATTCAACTTT 58.971 33.333 1.47 0.00 0.00 2.66
5663 6960 5.835113 ATTGGGTCATCTATTTTGGAACG 57.165 39.130 0.00 0.00 0.00 3.95
5664 6961 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
5665 6962 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
5666 6963 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
5667 6964 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
5668 6965 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
5669 6966 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
5729 7027 9.832445 AAGTCTATGAACAACAGAAGAAACTTA 57.168 29.630 0.00 0.00 0.00 2.24
5962 7260 1.534729 CCTTGAAAGGGGTGTACAGC 58.465 55.000 16.75 16.75 42.66 4.40
6010 7308 4.258206 CCCCAACATATTGCGGCT 57.742 55.556 0.00 0.00 34.17 5.52
6013 7311 1.037030 CCCAACATATTGCGGCTGGT 61.037 55.000 0.00 0.00 34.17 4.00
6144 7442 5.118286 TCTACATATGGTCAGTTGTGCATG 58.882 41.667 7.80 0.00 0.00 4.06
6178 7476 4.868171 TGCAGTATTCATTGTCGTAAGGAC 59.132 41.667 0.00 0.00 46.27 3.85
6258 7556 1.918957 CCCCTGAGAATTGGAGAACCT 59.081 52.381 0.00 0.00 37.04 3.50
6312 7610 5.125578 GGAATTAGGTTGCTTAGGTCAAAGG 59.874 44.000 0.00 0.00 0.00 3.11
6368 7666 0.976641 TGAGCACTAGTGTTCTGGGG 59.023 55.000 31.60 4.92 40.76 4.96
6465 7763 2.900546 TGGAAATATTTGGGTTGGCGTT 59.099 40.909 5.17 0.00 0.00 4.84
6478 7776 3.065648 GGTTGGCGTTGACTTTTGAGTTA 59.934 43.478 0.00 0.00 0.00 2.24
6612 7910 5.796350 AAGCAGTATTGTCCATTTCGTAC 57.204 39.130 0.00 0.00 0.00 3.67
6638 7936 2.236766 ACTGATGCTCTTTTTGCTGCT 58.763 42.857 0.00 0.00 0.00 4.24
6782 8081 3.493350 CCACCGTCTCAAGGGAATGATAG 60.493 52.174 0.00 0.00 34.41 2.08
6909 8208 1.001764 CTTGCCAGACTGCCATGGA 60.002 57.895 18.40 0.00 39.02 3.41
6914 8213 1.408683 GCCAGACTGCCATGGACATAA 60.409 52.381 18.40 0.00 39.02 1.90
6922 8221 1.338973 GCCATGGACATAACCAGCATG 59.661 52.381 18.40 0.00 43.49 4.06
6961 8260 4.521146 CTCAAACCAGAGGATAGCACAAT 58.479 43.478 0.00 0.00 31.94 2.71
7073 8471 2.354305 GAACGTCGCTCACACGGT 60.354 61.111 0.00 0.00 40.76 4.83
7092 8490 1.212934 TAGAGGACACCGAGGAGGGT 61.213 60.000 0.00 0.00 46.96 4.34
7121 8519 2.790791 ATTCTCTCGAGCCCGGCAG 61.791 63.158 13.15 5.31 36.24 4.85
7245 8643 2.757099 GGCAGAGTGGCATTGGGG 60.757 66.667 0.00 0.00 43.14 4.96
7246 8644 2.757099 GCAGAGTGGCATTGGGGG 60.757 66.667 0.00 0.00 0.00 5.40
7247 8645 2.757099 CAGAGTGGCATTGGGGGC 60.757 66.667 0.00 0.00 0.00 5.80
7248 8646 2.943265 AGAGTGGCATTGGGGGCT 60.943 61.111 0.00 0.00 0.00 5.19
7249 8647 1.619363 AGAGTGGCATTGGGGGCTA 60.619 57.895 0.00 0.00 0.00 3.93
7325 8724 2.361610 CGGTCCTTGCTGGCCATT 60.362 61.111 5.51 0.00 33.44 3.16
7327 8726 1.535204 CGGTCCTTGCTGGCCATTTT 61.535 55.000 5.51 0.00 33.44 1.82
7332 8731 0.037046 CTTGCTGGCCATTTTGGGAC 60.037 55.000 5.51 0.00 38.19 4.46
7333 8732 0.762082 TTGCTGGCCATTTTGGGACA 60.762 50.000 5.51 0.00 46.10 4.02
7378 8785 0.246910 TTTCCCATACACTGCGCGTA 59.753 50.000 8.43 0.71 0.00 4.42
7386 8793 0.598942 ACACTGCGCGTACATGTTCA 60.599 50.000 8.43 0.00 0.00 3.18
7393 8800 2.664424 GCGCGTACATGTTCATGTGTTT 60.664 45.455 23.33 4.30 36.08 2.83
7394 8801 3.550561 CGCGTACATGTTCATGTGTTTT 58.449 40.909 23.33 3.98 36.08 2.43
7396 8803 5.140872 CGCGTACATGTTCATGTGTTTTTA 58.859 37.500 23.33 4.63 36.08 1.52
7450 8857 3.739519 GCGAGAATTATGCAGACCTGAGT 60.740 47.826 0.47 0.00 0.00 3.41
7485 8894 3.066621 ACAATAGTGTGTTGTGCAGGTTG 59.933 43.478 0.00 0.00 38.31 3.77
7546 8955 1.401199 TGTATGCATCCATGTTGCGTG 59.599 47.619 18.10 0.72 43.10 5.34
7592 9001 1.945662 CGCTGGCGCCAATTATTGC 60.946 57.895 32.09 26.54 0.00 3.56
7617 9026 0.229753 CGAACTCGCAACTGTGTGTC 59.770 55.000 0.00 0.00 36.58 3.67
7626 9035 0.532640 AACTGTGTGTCATCGCTGCA 60.533 50.000 0.00 0.00 0.00 4.41
7666 9075 0.524816 GATGCATGCCAGAAACGCAG 60.525 55.000 16.68 0.00 40.15 5.18
7740 9157 3.179265 GTCCATGCGGTCGTCGTG 61.179 66.667 0.00 0.00 41.72 4.35
7755 9242 5.347907 GGTCGTCGTGTTATCTTTCATTCTT 59.652 40.000 0.00 0.00 0.00 2.52
7763 9250 6.096001 GTGTTATCTTTCATTCTTGGGAGCAT 59.904 38.462 0.00 0.00 0.00 3.79
7764 9251 6.664816 TGTTATCTTTCATTCTTGGGAGCATT 59.335 34.615 0.00 0.00 0.00 3.56
7775 9262 1.280710 TGGGAGCATTAAAGGAAGCGA 59.719 47.619 0.00 0.00 0.00 4.93
7892 9400 3.547513 ACCGCCGGCCTAATCCTC 61.548 66.667 23.46 0.00 0.00 3.71
7904 9412 3.458487 GCCTAATCCTCCACCTCCTTTTA 59.542 47.826 0.00 0.00 0.00 1.52
7916 9424 2.027100 CCTCCTTTTACACACCCTCTCC 60.027 54.545 0.00 0.00 0.00 3.71
7927 9435 1.351017 CACCCTCTCCCTTAAGCAACA 59.649 52.381 0.00 0.00 0.00 3.33
7936 9444 0.250553 CTTAAGCAACACCACCGGGA 60.251 55.000 6.32 0.00 38.05 5.14
7938 9446 1.122632 TAAGCAACACCACCGGGAGA 61.123 55.000 6.32 0.00 38.05 3.71
7939 9447 2.668550 GCAACACCACCGGGAGAC 60.669 66.667 6.32 0.00 38.05 3.36
7940 9448 3.148084 CAACACCACCGGGAGACT 58.852 61.111 6.32 0.00 38.05 3.24
7941 9449 1.004918 CAACACCACCGGGAGACTC 60.005 63.158 6.32 0.00 38.05 3.36
7943 9451 2.283966 CACCACCGGGAGACTCCT 60.284 66.667 20.97 0.00 36.57 3.69
7944 9452 1.000019 CACCACCGGGAGACTCCTA 60.000 63.158 20.97 0.00 36.57 2.94
7945 9453 0.397254 CACCACCGGGAGACTCCTAT 60.397 60.000 20.97 4.29 36.57 2.57
7946 9454 0.338814 ACCACCGGGAGACTCCTATT 59.661 55.000 20.97 2.64 36.57 1.73
7947 9455 1.273666 ACCACCGGGAGACTCCTATTT 60.274 52.381 20.97 0.84 36.57 1.40
7948 9456 1.838077 CCACCGGGAGACTCCTATTTT 59.162 52.381 20.97 0.00 36.57 1.82
7949 9457 2.238898 CCACCGGGAGACTCCTATTTTT 59.761 50.000 20.97 0.00 36.57 1.94
7985 9493 4.322385 GCCACCGGTTTGTGCGAC 62.322 66.667 2.97 0.00 34.85 5.19
7986 9494 2.590575 CCACCGGTTTGTGCGACT 60.591 61.111 2.97 0.00 34.85 4.18
7987 9495 1.301087 CCACCGGTTTGTGCGACTA 60.301 57.895 2.97 0.00 34.85 2.59
7988 9496 1.562575 CCACCGGTTTGTGCGACTAC 61.563 60.000 2.97 0.00 34.85 2.73
7989 9497 1.301165 ACCGGTTTGTGCGACTACC 60.301 57.895 0.00 0.00 0.00 3.18
7990 9498 1.301087 CCGGTTTGTGCGACTACCA 60.301 57.895 0.00 0.00 0.00 3.25
7991 9499 1.562575 CCGGTTTGTGCGACTACCAC 61.563 60.000 0.00 0.00 0.00 4.16
7992 9500 0.876777 CGGTTTGTGCGACTACCACA 60.877 55.000 0.00 0.00 41.11 4.17
7993 9501 1.519408 GGTTTGTGCGACTACCACAT 58.481 50.000 0.00 0.00 42.23 3.21
7994 9502 2.690786 GGTTTGTGCGACTACCACATA 58.309 47.619 0.00 0.00 42.23 2.29
7995 9503 2.671396 GGTTTGTGCGACTACCACATAG 59.329 50.000 0.00 0.00 42.23 2.23
7996 9504 3.581755 GTTTGTGCGACTACCACATAGA 58.418 45.455 0.00 0.00 42.23 1.98
7997 9505 2.933495 TGTGCGACTACCACATAGAC 57.067 50.000 0.00 0.00 38.21 2.59
7998 9506 2.164338 TGTGCGACTACCACATAGACA 58.836 47.619 0.00 0.00 38.21 3.41
8029 9537 6.363626 CGTTGATTCGTTCCAGAGGAATATAG 59.636 42.308 1.30 0.00 44.04 1.31
8030 9538 6.978674 TGATTCGTTCCAGAGGAATATAGT 57.021 37.500 1.30 0.00 44.04 2.12
8032 9540 7.210174 TGATTCGTTCCAGAGGAATATAGTTG 58.790 38.462 1.30 0.00 44.04 3.16
8033 9541 6.785337 TTCGTTCCAGAGGAATATAGTTGA 57.215 37.500 1.30 0.00 44.04 3.18
8036 9544 8.473358 TCGTTCCAGAGGAATATAGTTGATTA 57.527 34.615 1.30 0.00 44.04 1.75
8037 9545 9.090103 TCGTTCCAGAGGAATATAGTTGATTAT 57.910 33.333 1.30 0.00 44.04 1.28
8098 9614 1.947678 GCAGGAGGACACCACATCAAG 60.948 57.143 0.00 0.00 0.00 3.02
8155 9671 2.382746 TGCTGCGTCGCATCTCAAC 61.383 57.895 22.03 6.93 38.13 3.18
8183 9699 2.923655 ACGTGAATCATTGCTGTCTACG 59.076 45.455 0.00 0.00 35.40 3.51
8202 9718 1.200020 CGACCTCAAAGCACATTTCCC 59.800 52.381 0.00 0.00 0.00 3.97
8204 9720 1.133199 ACCTCAAAGCACATTTCCCCA 60.133 47.619 0.00 0.00 0.00 4.96
8209 9725 2.149973 AAGCACATTTCCCCATCTCC 57.850 50.000 0.00 0.00 0.00 3.71
8282 9798 8.614994 TTAGTTTTGAAAAGAAAGAAAGCGAG 57.385 30.769 0.00 0.00 0.00 5.03
8364 9908 0.247736 GCTCGTCATGGAGACCTTGT 59.752 55.000 3.41 0.00 44.66 3.16
8365 9909 2.001812 CTCGTCATGGAGACCTTGTG 57.998 55.000 0.00 0.00 44.66 3.33
8377 9921 0.987294 ACCTTGTGCACCTGAGCTAT 59.013 50.000 15.69 0.00 34.99 2.97
8424 9968 3.497763 TGGTTCAACCATGGAAGTACCAG 60.498 47.826 24.46 6.80 44.79 4.00
8435 9979 5.806955 TGGAAGTACCAGGGGATATTTTT 57.193 39.130 0.00 0.00 44.64 1.94
8452 9996 0.878416 TTTTGGCGACCTCAATTCCG 59.122 50.000 0.00 0.00 0.00 4.30
8453 9997 0.250553 TTTGGCGACCTCAATTCCGT 60.251 50.000 0.00 0.00 0.00 4.69
8454 9998 0.953471 TTGGCGACCTCAATTCCGTG 60.953 55.000 0.00 0.00 0.00 4.94
8455 9999 2.750888 GGCGACCTCAATTCCGTGC 61.751 63.158 0.00 0.00 0.00 5.34
8456 10000 2.750888 GCGACCTCAATTCCGTGCC 61.751 63.158 0.00 0.00 0.00 5.01
8457 10001 1.079127 CGACCTCAATTCCGTGCCT 60.079 57.895 0.00 0.00 0.00 4.75
8458 10002 0.174845 CGACCTCAATTCCGTGCCTA 59.825 55.000 0.00 0.00 0.00 3.93
8459 10003 1.653151 GACCTCAATTCCGTGCCTAC 58.347 55.000 0.00 0.00 0.00 3.18
8460 10004 0.981183 ACCTCAATTCCGTGCCTACA 59.019 50.000 0.00 0.00 0.00 2.74
8461 10005 1.066143 ACCTCAATTCCGTGCCTACAG 60.066 52.381 0.00 0.00 0.00 2.74
8462 10006 1.207089 CCTCAATTCCGTGCCTACAGA 59.793 52.381 0.00 0.00 0.00 3.41
8463 10007 2.354704 CCTCAATTCCGTGCCTACAGAA 60.355 50.000 0.00 0.00 0.00 3.02
8464 10008 3.535561 CTCAATTCCGTGCCTACAGAAT 58.464 45.455 0.00 0.00 35.88 2.40
8465 10009 4.442893 CCTCAATTCCGTGCCTACAGAATA 60.443 45.833 0.00 0.00 33.82 1.75
8466 10010 5.290493 TCAATTCCGTGCCTACAGAATAT 57.710 39.130 0.00 0.00 33.82 1.28
8467 10011 6.413783 TCAATTCCGTGCCTACAGAATATA 57.586 37.500 0.00 0.00 33.82 0.86
8468 10012 7.004555 TCAATTCCGTGCCTACAGAATATAT 57.995 36.000 0.00 0.00 33.82 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.614616 CGCATTCTCTAACACTTCCTCAC 59.385 47.826 0.00 0.00 0.00 3.51
35 36 4.183865 CAACCATCTCGCATTCTCTAACA 58.816 43.478 0.00 0.00 0.00 2.41
185 186 4.397420 TGTTGACTTGGCAATGTATCTGT 58.603 39.130 0.00 0.00 0.00 3.41
194 195 6.364701 AGCCTATAATATGTTGACTTGGCAA 58.635 36.000 0.00 0.00 39.10 4.52
221 222 1.480498 GGACCCTCACAACACCCAAAT 60.480 52.381 0.00 0.00 0.00 2.32
230 231 1.675219 GCGTAAGGGACCCTCACAA 59.325 57.895 15.27 0.00 30.89 3.33
343 345 1.303309 GAATCCTGAAGGCCATGTCG 58.697 55.000 5.01 0.00 34.44 4.35
345 347 1.341383 GGTGAATCCTGAAGGCCATGT 60.341 52.381 5.01 0.00 34.44 3.21
396 398 4.212425 ACAAGAATGTGTTTCGCGTTATCA 59.788 37.500 5.77 0.98 38.69 2.15
406 408 4.717233 TGCACTGAACAAGAATGTGTTT 57.283 36.364 0.00 0.00 41.78 2.83
427 429 2.032620 CCACACTTCCCTAGCGTAGAT 58.967 52.381 0.00 0.00 0.00 1.98
513 516 1.229496 TCTCCTAGCCAGCCACCAA 60.229 57.895 0.00 0.00 0.00 3.67
560 563 2.095969 GCAATGATCACCGTGTCGAAAA 60.096 45.455 0.00 0.00 0.00 2.29
645 648 1.429148 GGGCTAATTCTGGCGTCGTG 61.429 60.000 0.00 0.00 0.00 4.35
660 663 2.420568 CGCAATGATGGCAAGGGCT 61.421 57.895 0.00 0.00 40.87 5.19
763 766 1.192146 ACGCACACCCTATCACACCT 61.192 55.000 0.00 0.00 0.00 4.00
770 773 1.198759 ACCAAGGACGCACACCCTAT 61.199 55.000 0.00 0.00 31.36 2.57
788 797 4.246458 AGAGTGTTAAAGATCGCTTCCAC 58.754 43.478 0.00 0.00 31.82 4.02
849 870 0.736325 CCTCGAGTGTACGCCAAAGG 60.736 60.000 12.31 3.63 0.00 3.11
850 871 0.242825 TCCTCGAGTGTACGCCAAAG 59.757 55.000 12.31 0.00 0.00 2.77
861 882 5.859495 AGATTGTCTTTTCTTTCCTCGAGT 58.141 37.500 12.31 0.00 0.00 4.18
862 883 7.316640 TCTAGATTGTCTTTTCTTTCCTCGAG 58.683 38.462 5.13 5.13 0.00 4.04
863 884 7.176865 TCTCTAGATTGTCTTTTCTTTCCTCGA 59.823 37.037 0.00 0.00 0.00 4.04
864 885 7.316640 TCTCTAGATTGTCTTTTCTTTCCTCG 58.683 38.462 0.00 0.00 0.00 4.63
865 886 9.665719 ATTCTCTAGATTGTCTTTTCTTTCCTC 57.334 33.333 0.00 0.00 0.00 3.71
935 956 7.525194 CGGACATCTCATGATTATTCTCCTCTT 60.525 40.741 0.00 0.00 0.00 2.85
942 963 6.293081 CCAACACGGACATCTCATGATTATTC 60.293 42.308 0.00 0.00 36.56 1.75
973 994 3.730715 CGTTGCAACCTGAACTTTGATTC 59.269 43.478 23.42 0.00 0.00 2.52
984 1005 1.191647 GTTCGTACTCGTTGCAACCTG 59.808 52.381 23.42 17.59 38.33 4.00
1026 1047 0.325602 ATCCACCTTTTTACCCGCGA 59.674 50.000 8.23 0.00 0.00 5.87
1074 1095 4.410400 GACCCCGGCAGAACCCTG 62.410 72.222 0.00 0.00 43.22 4.45
1318 1352 5.470098 GGAACTACAGAAGCAATTTGAGACA 59.530 40.000 0.00 0.00 0.00 3.41
1407 1441 1.193665 CGGCAACAATCGCGCATTAC 61.194 55.000 8.75 0.00 0.00 1.89
1446 1480 3.249799 TCAACAACTACGCATCAAACAGG 59.750 43.478 0.00 0.00 0.00 4.00
1481 1515 1.377202 GCCCGTTCAGATCCAAGCA 60.377 57.895 0.00 0.00 0.00 3.91
1487 1521 2.478831 GAGATCAAGCCCGTTCAGATC 58.521 52.381 0.00 0.00 36.29 2.75
1552 1586 1.700042 GCTACATCCAGTCCCCCAGG 61.700 65.000 0.00 0.00 0.00 4.45
1592 1626 0.110486 AGTATTAGCATTGGCCCCCG 59.890 55.000 0.00 0.00 42.56 5.73
1620 1656 1.821136 CAACCAAAGGCAGGAATCCTC 59.179 52.381 0.00 0.00 32.45 3.71
1627 1663 3.987220 CGTAATTTTCAACCAAAGGCAGG 59.013 43.478 0.00 0.00 0.00 4.85
1633 1669 4.314740 AGCTGCGTAATTTTCAACCAAA 57.685 36.364 0.00 0.00 0.00 3.28
1637 1673 4.723248 AGCTAAGCTGCGTAATTTTCAAC 58.277 39.130 0.00 0.00 37.57 3.18
1710 1747 2.673368 GGCTCATAAGTTTGACCGACAG 59.327 50.000 0.00 0.00 0.00 3.51
1731 1768 1.000955 AGCCTCGTAGTTGGTGTTGAG 59.999 52.381 0.00 0.00 0.00 3.02
1832 1895 7.452501 ACTTCAGTTTACAGGTAGGTATGTGTA 59.547 37.037 0.00 0.00 0.00 2.90
1879 1942 4.935808 CACTTGAGTATGTAACCCTGGAAC 59.064 45.833 0.00 0.00 0.00 3.62
1892 1955 5.663106 TCTCAGATAAAGCCCACTTGAGTAT 59.337 40.000 0.00 0.00 35.85 2.12
1911 1974 7.546667 CCACCACAAAAATCCAAATTATCTCAG 59.453 37.037 0.00 0.00 0.00 3.35
1917 1982 7.338710 TCAAACCACCACAAAAATCCAAATTA 58.661 30.769 0.00 0.00 0.00 1.40
1932 1997 4.787551 AGTGTACAAATCTCAAACCACCA 58.212 39.130 0.00 0.00 0.00 4.17
1956 2021 6.254281 ACAAGCGAGCAACATAAAATAGTT 57.746 33.333 0.00 0.00 0.00 2.24
2276 2343 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2277 2344 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2278 2345 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2279 2346 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2280 2347 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2281 2348 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2282 2349 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2283 2350 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2284 2351 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2285 2352 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2286 2353 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2287 2354 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2294 2361 9.918630 CCTCTTTTATTCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
2340 2407 9.965902 ATGGACAAAAGAAATGTATCTAGAACT 57.034 29.630 0.00 0.00 0.00 3.01
2349 2416 9.474920 GTCATCAAAATGGACAAAAGAAATGTA 57.525 29.630 0.00 0.00 33.42 2.29
2350 2417 7.986320 TGTCATCAAAATGGACAAAAGAAATGT 59.014 29.630 0.00 0.00 33.42 2.71
2351 2418 8.367943 TGTCATCAAAATGGACAAAAGAAATG 57.632 30.769 0.00 0.00 33.42 2.32
2352 2419 8.961294 TTGTCATCAAAATGGACAAAAGAAAT 57.039 26.923 4.15 0.00 33.71 2.17
2353 2420 8.040132 ACTTGTCATCAAAATGGACAAAAGAAA 58.960 29.630 7.70 0.00 34.98 2.52
2354 2421 7.555087 ACTTGTCATCAAAATGGACAAAAGAA 58.445 30.769 7.70 0.00 34.98 2.52
2355 2422 7.111247 ACTTGTCATCAAAATGGACAAAAGA 57.889 32.000 7.70 0.00 34.98 2.52
2356 2423 9.480053 AATACTTGTCATCAAAATGGACAAAAG 57.520 29.630 7.70 0.73 34.98 2.27
2357 2424 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
2358 2425 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
2359 2426 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
2360 2427 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
2361 2428 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
2362 2429 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2363 2430 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2364 2431 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2365 2432 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2366 2433 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2367 2434 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2368 2435 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2369 2436 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2370 2437 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2371 2438 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2372 2439 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2373 2440 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2374 2441 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2375 2442 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2376 2443 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2377 2444 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2378 2445 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2379 2446 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2380 2447 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
2381 2448 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
2382 2449 1.318158 GCTACTCCCTCCGTCCGAAA 61.318 60.000 0.00 0.00 0.00 3.46
2383 2450 1.751927 GCTACTCCCTCCGTCCGAA 60.752 63.158 0.00 0.00 0.00 4.30
2384 2451 2.124403 GCTACTCCCTCCGTCCGA 60.124 66.667 0.00 0.00 0.00 4.55
2385 2452 2.050350 TTGCTACTCCCTCCGTCCG 61.050 63.158 0.00 0.00 0.00 4.79
2386 2453 0.971447 AGTTGCTACTCCCTCCGTCC 60.971 60.000 0.00 0.00 0.00 4.79
2387 2454 0.896226 AAGTTGCTACTCCCTCCGTC 59.104 55.000 0.07 0.00 31.99 4.79
2388 2455 0.608640 CAAGTTGCTACTCCCTCCGT 59.391 55.000 0.07 0.00 31.99 4.69
2389 2456 0.741221 GCAAGTTGCTACTCCCTCCG 60.741 60.000 20.71 0.00 40.96 4.63
2390 2457 0.324943 TGCAAGTTGCTACTCCCTCC 59.675 55.000 27.17 0.00 45.31 4.30
2391 2458 1.270839 TGTGCAAGTTGCTACTCCCTC 60.271 52.381 27.17 8.95 45.31 4.30
2392 2459 0.764890 TGTGCAAGTTGCTACTCCCT 59.235 50.000 27.17 0.00 45.31 4.20
2393 2460 1.160137 CTGTGCAAGTTGCTACTCCC 58.840 55.000 27.17 9.62 45.31 4.30
2394 2461 1.532868 CACTGTGCAAGTTGCTACTCC 59.467 52.381 27.17 11.20 45.31 3.85
2395 2462 1.532868 CCACTGTGCAAGTTGCTACTC 59.467 52.381 27.17 15.29 45.31 2.59
2396 2463 1.134098 ACCACTGTGCAAGTTGCTACT 60.134 47.619 27.17 7.65 45.31 2.57
2397 2464 1.264288 GACCACTGTGCAAGTTGCTAC 59.736 52.381 27.17 21.91 45.31 3.58
2398 2465 1.134250 TGACCACTGTGCAAGTTGCTA 60.134 47.619 27.17 15.68 45.31 3.49
2399 2466 0.394216 TGACCACTGTGCAAGTTGCT 60.394 50.000 27.17 6.31 45.31 3.91
2408 2475 2.078849 TGCGAGTAATGACCACTGTG 57.921 50.000 0.00 0.00 0.00 3.66
2409 2476 2.621338 CATGCGAGTAATGACCACTGT 58.379 47.619 0.00 0.00 0.00 3.55
2739 2808 3.949842 AAACAGGAGGAAGGTACGTAC 57.050 47.619 17.56 17.56 0.00 3.67
2740 2809 4.142093 GCATAAACAGGAGGAAGGTACGTA 60.142 45.833 0.00 0.00 0.00 3.57
2741 2810 3.369157 GCATAAACAGGAGGAAGGTACGT 60.369 47.826 0.00 0.00 0.00 3.57
2742 2811 3.195661 GCATAAACAGGAGGAAGGTACG 58.804 50.000 0.00 0.00 0.00 3.67
2816 2896 2.291605 ACAATTTCTACTTGGCCCCCTC 60.292 50.000 0.00 0.00 0.00 4.30
2820 2900 4.600692 ACAAACAATTTCTACTTGGCCC 57.399 40.909 0.00 0.00 0.00 5.80
2870 2950 5.516591 CCCACCCCTAAGATTCTTCTTTTCA 60.517 44.000 1.27 0.00 42.29 2.69
2871 2951 4.950475 CCCACCCCTAAGATTCTTCTTTTC 59.050 45.833 1.27 0.00 42.29 2.29
2872 2952 4.264397 CCCCACCCCTAAGATTCTTCTTTT 60.264 45.833 1.27 0.00 42.29 2.27
2873 2953 3.269643 CCCCACCCCTAAGATTCTTCTTT 59.730 47.826 1.27 0.00 42.29 2.52
2874 2954 2.853077 CCCCACCCCTAAGATTCTTCTT 59.147 50.000 1.27 0.00 44.44 2.52
2875 2955 2.493091 CCCCACCCCTAAGATTCTTCT 58.507 52.381 1.27 0.00 0.00 2.85
2876 2956 1.495148 CCCCCACCCCTAAGATTCTTC 59.505 57.143 1.27 0.00 0.00 2.87
2877 2957 1.608425 CCCCCACCCCTAAGATTCTT 58.392 55.000 4.03 4.03 0.00 2.52
2878 2958 3.359669 CCCCCACCCCTAAGATTCT 57.640 57.895 0.00 0.00 0.00 2.40
2897 2977 2.442830 GGCCAAGGGGAAGCCATC 60.443 66.667 0.00 0.00 46.34 3.51
2900 2980 3.997952 AAGGGCCAAGGGGAAGCC 61.998 66.667 6.18 0.00 46.37 4.35
2901 2981 2.681421 CAAGGGCCAAGGGGAAGC 60.681 66.667 6.18 0.00 35.59 3.86
2902 2982 2.037847 CCAAGGGCCAAGGGGAAG 59.962 66.667 6.18 0.00 35.59 3.46
2903 2983 4.315264 GCCAAGGGCCAAGGGGAA 62.315 66.667 6.18 0.00 44.06 3.97
3421 3787 9.445786 GTTGACGATGAAACAAGAAAGAAATAA 57.554 29.630 0.00 0.00 0.00 1.40
3422 3788 8.616942 TGTTGACGATGAAACAAGAAAGAAATA 58.383 29.630 0.00 0.00 33.50 1.40
3423 3789 7.479980 TGTTGACGATGAAACAAGAAAGAAAT 58.520 30.769 0.00 0.00 33.50 2.17
3611 3986 1.269998 GAGACCCCGGATATTCTGTCG 59.730 57.143 0.73 0.00 0.00 4.35
3880 4258 2.522185 AGGCATGTTTGATTCACAGCT 58.478 42.857 0.00 0.00 0.00 4.24
3885 4263 6.647334 TTCACTAAAGGCATGTTTGATTCA 57.353 33.333 0.00 0.00 0.00 2.57
3933 4311 4.616181 AAGTTGTGTACAGTGCTTGTTC 57.384 40.909 0.00 0.00 41.29 3.18
4058 4444 5.387113 TGGCAACCTATCACAATAAGGAT 57.613 39.130 0.00 0.00 0.00 3.24
4121 4507 4.202556 TGGACAAGTCAATTCTTGATGGGA 60.203 41.667 12.48 0.00 45.11 4.37
4234 4627 7.928167 GGAAGAAGAAAAATTGGACAAGTCAAT 59.072 33.333 2.29 0.00 36.50 2.57
4247 4640 7.966812 ACCAAATGCTTAGGAAGAAGAAAAAT 58.033 30.769 0.00 0.00 0.00 1.82
4298 4691 7.687941 ACAAAGTTCAAGGTTATATGGAGTG 57.312 36.000 0.00 0.00 0.00 3.51
4546 5160 5.813080 AGAACGGTGGCATTAAAGTAATC 57.187 39.130 0.00 0.00 0.00 1.75
4670 5293 6.544650 TGGTGCAAGTATTCTAAAGGGTAAA 58.455 36.000 0.00 0.00 0.00 2.01
4671 5294 6.129414 TGGTGCAAGTATTCTAAAGGGTAA 57.871 37.500 0.00 0.00 0.00 2.85
4672 5295 5.765576 TGGTGCAAGTATTCTAAAGGGTA 57.234 39.130 0.00 0.00 0.00 3.69
4673 5296 4.650972 TGGTGCAAGTATTCTAAAGGGT 57.349 40.909 0.00 0.00 0.00 4.34
4674 5297 5.192927 TCATGGTGCAAGTATTCTAAAGGG 58.807 41.667 0.00 0.00 0.00 3.95
4675 5298 6.757897 TTCATGGTGCAAGTATTCTAAAGG 57.242 37.500 0.00 0.00 0.00 3.11
4676 5299 9.643693 AAATTTCATGGTGCAAGTATTCTAAAG 57.356 29.630 0.00 0.00 0.00 1.85
4710 5333 6.731292 TGATGCAGTACTATACATGGACTT 57.269 37.500 9.30 0.00 0.00 3.01
5074 5858 7.801716 TTACAAGTGACAGCAAACTAGAAAT 57.198 32.000 0.00 0.00 0.00 2.17
5171 6362 2.816689 TGCTGTACACTACACACACAC 58.183 47.619 0.00 0.00 34.46 3.82
5272 6561 4.460263 ACTGTCTGCAGGTTGTAATGAAA 58.540 39.130 15.13 0.00 46.62 2.69
5467 6756 4.526970 ACAAGGATACCATTGGCAACTAG 58.473 43.478 0.00 0.00 34.43 2.57
5556 6846 6.420913 AGTACCATTTCTGTCACAGTAGTT 57.579 37.500 4.28 0.00 32.61 2.24
5558 6848 5.411781 GGAGTACCATTTCTGTCACAGTAG 58.588 45.833 4.28 0.00 35.97 2.57
5575 6872 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
5576 6873 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
5577 6874 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
5578 6875 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
5579 6876 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
5580 6877 4.150897 TCATCTATTTTGGAACGGAGGG 57.849 45.455 0.00 0.00 0.00 4.30
5581 6878 5.822519 TGAATCATCTATTTTGGAACGGAGG 59.177 40.000 0.00 0.00 0.00 4.30
5582 6879 6.925610 TGAATCATCTATTTTGGAACGGAG 57.074 37.500 0.00 0.00 0.00 4.63
5583 6880 6.884295 AGTTGAATCATCTATTTTGGAACGGA 59.116 34.615 0.00 0.00 0.00 4.69
5584 6881 7.088589 AGTTGAATCATCTATTTTGGAACGG 57.911 36.000 0.00 0.00 0.00 4.44
5585 6882 8.970691 AAAGTTGAATCATCTATTTTGGAACG 57.029 30.769 0.00 0.00 0.00 3.95
5637 6934 8.247562 CGTTCCAAAATAGATGACCCAATTTTA 58.752 33.333 0.00 0.00 31.97 1.52
5638 6935 7.096551 CGTTCCAAAATAGATGACCCAATTTT 58.903 34.615 0.00 0.00 33.07 1.82
5639 6936 6.350949 CCGTTCCAAAATAGATGACCCAATTT 60.351 38.462 0.00 0.00 0.00 1.82
5640 6937 5.127031 CCGTTCCAAAATAGATGACCCAATT 59.873 40.000 0.00 0.00 0.00 2.32
5641 6938 4.644685 CCGTTCCAAAATAGATGACCCAAT 59.355 41.667 0.00 0.00 0.00 3.16
5642 6939 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
5643 6940 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
5644 6941 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
5645 6942 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
5646 6943 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
5647 6944 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
5648 6945 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
5649 6946 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
5650 6947 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
5651 6948 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
5652 6949 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
5653 6950 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
5654 6951 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
5655 6952 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
5656 6953 1.621814 CAACTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
5657 6954 1.203087 TCAACTACTCCCTCCGTTCCA 60.203 52.381 0.00 0.00 0.00 3.53
5658 6955 1.477295 CTCAACTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 0.00 3.62
5659 6956 2.164017 GTCTCAACTACTCCCTCCGTTC 59.836 54.545 0.00 0.00 0.00 3.95
5660 6957 2.169330 GTCTCAACTACTCCCTCCGTT 58.831 52.381 0.00 0.00 0.00 4.44
5661 6958 1.355043 AGTCTCAACTACTCCCTCCGT 59.645 52.381 0.00 0.00 32.59 4.69
5662 6959 2.131776 AGTCTCAACTACTCCCTCCG 57.868 55.000 0.00 0.00 32.59 4.63
5663 6960 5.422650 ACAAATAGTCTCAACTACTCCCTCC 59.577 44.000 0.00 0.00 40.74 4.30
5664 6961 6.071278 ACACAAATAGTCTCAACTACTCCCTC 60.071 42.308 0.00 0.00 40.74 4.30
5665 6962 5.780793 ACACAAATAGTCTCAACTACTCCCT 59.219 40.000 0.00 0.00 40.74 4.20
5666 6963 6.038997 ACACAAATAGTCTCAACTACTCCC 57.961 41.667 0.00 0.00 40.74 4.30
5667 6964 6.929606 ACAACACAAATAGTCTCAACTACTCC 59.070 38.462 0.00 0.00 40.74 3.85
5668 6965 7.948278 ACAACACAAATAGTCTCAACTACTC 57.052 36.000 0.00 0.00 40.74 2.59
5669 6966 8.732746 AAACAACACAAATAGTCTCAACTACT 57.267 30.769 0.00 0.00 40.74 2.57
5729 7027 2.166254 CAGCACGCTCCCCAATTAAAAT 59.834 45.455 0.00 0.00 0.00 1.82
5962 7260 3.005554 CAGGCAAAGAGATGTACACAGG 58.994 50.000 0.00 0.00 0.00 4.00
6178 7476 6.478344 GCTACTTGTGAGGATGAGAAATACTG 59.522 42.308 0.00 0.00 0.00 2.74
6274 7572 7.368059 CAACCTAATTCCACTACCAGTTTTTC 58.632 38.462 0.00 0.00 0.00 2.29
6275 7573 6.239204 GCAACCTAATTCCACTACCAGTTTTT 60.239 38.462 0.00 0.00 0.00 1.94
6345 7643 4.074970 CCCAGAACACTAGTGCTCAAAAT 58.925 43.478 24.35 4.75 28.17 1.82
6368 7666 3.184541 CATTGCCTAGTGTACGGTGTAC 58.815 50.000 0.22 0.22 0.00 2.90
6436 7734 4.746466 ACCCAAATATTTCCAGTTCCACA 58.254 39.130 0.00 0.00 0.00 4.17
6529 7827 5.163693 CCCCCACGTTACATGTAATTTTCTC 60.164 44.000 20.72 6.58 0.00 2.87
6554 7852 7.845622 GCAAAATCAACAAAACAGATGTAACAC 59.154 33.333 0.00 0.00 0.00 3.32
6558 7856 8.549548 CATTGCAAAATCAACAAAACAGATGTA 58.450 29.630 1.71 0.00 0.00 2.29
6561 7859 6.261381 AGCATTGCAAAATCAACAAAACAGAT 59.739 30.769 11.91 0.00 0.00 2.90
6588 7886 6.018994 GGTACGAAATGGACAATACTGCTTAG 60.019 42.308 0.00 0.00 0.00 2.18
6612 7910 3.985925 GCAAAAAGAGCATCAGTTCTTGG 59.014 43.478 0.00 0.00 43.41 3.61
6638 7936 5.700832 AGAAAGAGCATCAAATGTGAACGTA 59.299 36.000 0.00 0.00 37.30 3.57
6909 8208 1.915489 TCAGGGTCATGCTGGTTATGT 59.085 47.619 0.00 0.00 0.00 2.29
6914 8213 0.038744 CCTTTCAGGGTCATGCTGGT 59.961 55.000 0.00 0.00 0.00 4.00
6922 8221 0.962855 GAGCCTTGCCTTTCAGGGTC 60.963 60.000 1.84 1.84 43.37 4.46
6961 8260 3.849951 GCCATCCCTCGCTTCGGA 61.850 66.667 0.00 0.00 0.00 4.55
7021 8320 5.048083 TGTTTATCTTTTCCACTGCATCCAC 60.048 40.000 0.00 0.00 0.00 4.02
7073 8471 1.212934 ACCCTCCTCGGTGTCCTCTA 61.213 60.000 0.00 0.00 33.77 2.43
7245 8643 1.066929 CCCTGGTTGTTGCATTTAGCC 60.067 52.381 0.00 0.00 44.83 3.93
7246 8644 1.618343 ACCCTGGTTGTTGCATTTAGC 59.382 47.619 0.00 0.00 45.96 3.09
7247 8645 2.890311 TCACCCTGGTTGTTGCATTTAG 59.110 45.455 0.00 0.00 0.00 1.85
7248 8646 2.950781 TCACCCTGGTTGTTGCATTTA 58.049 42.857 0.00 0.00 0.00 1.40
7249 8647 1.786937 TCACCCTGGTTGTTGCATTT 58.213 45.000 0.00 0.00 0.00 2.32
7325 8724 1.418264 TCACGGTTCAGATGTCCCAAA 59.582 47.619 0.00 0.00 0.00 3.28
7327 8726 1.275666 ATCACGGTTCAGATGTCCCA 58.724 50.000 0.00 0.00 0.00 4.37
7332 8731 3.150848 TCTCGAATCACGGTTCAGATG 57.849 47.619 0.00 0.00 42.82 2.90
7333 8732 3.868757 TTCTCGAATCACGGTTCAGAT 57.131 42.857 0.00 0.00 42.82 2.90
7335 8734 4.445718 CCATATTCTCGAATCACGGTTCAG 59.554 45.833 0.00 0.00 42.82 3.02
7386 8793 6.256757 CCAACGTTTCCACAATAAAAACACAT 59.743 34.615 0.00 0.00 33.51 3.21
7393 8800 2.287668 CGCCCAACGTTTCCACAATAAA 60.288 45.455 0.00 0.00 36.87 1.40
7394 8801 1.267261 CGCCCAACGTTTCCACAATAA 59.733 47.619 0.00 0.00 36.87 1.40
7396 8803 1.657556 CGCCCAACGTTTCCACAAT 59.342 52.632 0.00 0.00 36.87 2.71
7606 9015 0.110509 GCAGCGATGACACACAGTTG 60.111 55.000 4.02 0.00 0.00 3.16
7612 9021 1.081094 CTGATTGCAGCGATGACACA 58.919 50.000 4.02 0.00 34.95 3.72
7615 9024 1.466167 ACAACTGATTGCAGCGATGAC 59.534 47.619 4.02 0.00 46.26 3.06
7617 9026 1.528400 CGACAACTGATTGCAGCGATG 60.528 52.381 0.00 0.00 46.26 3.84
7666 9075 0.107945 AGCTCTTTCCATGGACGAGC 60.108 55.000 36.10 36.10 42.90 5.03
7677 9086 1.224965 GATGATCCGCCAGCTCTTTC 58.775 55.000 0.00 0.00 0.00 2.62
7733 9150 5.347635 CCAAGAATGAAAGATAACACGACGA 59.652 40.000 0.00 0.00 0.00 4.20
7740 9157 6.705863 ATGCTCCCAAGAATGAAAGATAAC 57.294 37.500 0.00 0.00 0.00 1.89
7755 9242 1.280710 TCGCTTCCTTTAATGCTCCCA 59.719 47.619 0.00 0.00 0.00 4.37
7763 9250 4.110482 GTCTTATCGCTCGCTTCCTTTAA 58.890 43.478 0.00 0.00 0.00 1.52
7764 9251 3.703420 GTCTTATCGCTCGCTTCCTTTA 58.297 45.455 0.00 0.00 0.00 1.85
7775 9262 0.108615 AGCTGCAACGTCTTATCGCT 60.109 50.000 1.02 0.00 0.00 4.93
7836 9335 0.768622 TCGCCTTCCTCCTTTTTCCA 59.231 50.000 0.00 0.00 0.00 3.53
7892 9400 1.423921 AGGGTGTGTAAAAGGAGGTGG 59.576 52.381 0.00 0.00 0.00 4.61
7904 9412 0.984995 GCTTAAGGGAGAGGGTGTGT 59.015 55.000 4.29 0.00 0.00 3.72
7916 9424 1.241315 CCCGGTGGTGTTGCTTAAGG 61.241 60.000 4.29 0.00 0.00 2.69
7927 9435 0.338814 AATAGGAGTCTCCCGGTGGT 59.661 55.000 15.72 0.00 37.19 4.16
7946 9454 2.565834 AGGTCTGCGTCCTAGCTAAAAA 59.434 45.455 0.00 0.00 38.13 1.94
7947 9455 2.094182 CAGGTCTGCGTCCTAGCTAAAA 60.094 50.000 0.00 0.00 38.13 1.52
7948 9456 1.476891 CAGGTCTGCGTCCTAGCTAAA 59.523 52.381 0.00 0.00 38.13 1.85
7949 9457 1.103803 CAGGTCTGCGTCCTAGCTAA 58.896 55.000 0.00 0.00 38.13 3.09
7950 9458 2.795165 CAGGTCTGCGTCCTAGCTA 58.205 57.895 0.00 0.00 38.13 3.32
7951 9459 3.609703 CAGGTCTGCGTCCTAGCT 58.390 61.111 0.00 0.00 38.13 3.32
7985 9493 5.298527 TCAACGACCTATGTCTATGTGGTAG 59.701 44.000 0.00 0.00 39.47 3.18
7986 9494 5.195185 TCAACGACCTATGTCTATGTGGTA 58.805 41.667 0.00 0.00 39.47 3.25
7987 9495 4.021229 TCAACGACCTATGTCTATGTGGT 58.979 43.478 0.00 0.00 39.47 4.16
7988 9496 4.649088 TCAACGACCTATGTCTATGTGG 57.351 45.455 0.00 0.00 39.47 4.17
7989 9497 5.399596 CGAATCAACGACCTATGTCTATGTG 59.600 44.000 0.00 0.00 39.47 3.21
7990 9498 5.067413 ACGAATCAACGACCTATGTCTATGT 59.933 40.000 0.00 0.00 39.47 2.29
7991 9499 5.520632 ACGAATCAACGACCTATGTCTATG 58.479 41.667 0.00 0.00 39.47 2.23
7992 9500 5.769484 ACGAATCAACGACCTATGTCTAT 57.231 39.130 0.00 0.00 39.47 1.98
7993 9501 5.449588 GGAACGAATCAACGACCTATGTCTA 60.450 44.000 0.00 0.00 39.47 2.59
7994 9502 4.421948 GAACGAATCAACGACCTATGTCT 58.578 43.478 0.00 0.00 39.47 3.41
7995 9503 3.550678 GGAACGAATCAACGACCTATGTC 59.449 47.826 0.00 0.00 38.18 3.06
7996 9504 3.056393 TGGAACGAATCAACGACCTATGT 60.056 43.478 0.00 0.00 35.73 2.29
7997 9505 3.517602 TGGAACGAATCAACGACCTATG 58.482 45.455 0.00 0.00 35.73 2.23
7998 9506 3.446161 TCTGGAACGAATCAACGACCTAT 59.554 43.478 0.00 0.00 35.73 2.57
8029 9537 9.807649 ATGCATTTCCAAACTAGAATAATCAAC 57.192 29.630 0.00 0.00 0.00 3.18
8033 9541 9.950680 CGTAATGCATTTCCAAACTAGAATAAT 57.049 29.630 18.75 0.00 0.00 1.28
8036 9544 6.265577 GCGTAATGCATTTCCAAACTAGAAT 58.734 36.000 18.75 0.00 45.45 2.40
8037 9545 5.636837 GCGTAATGCATTTCCAAACTAGAA 58.363 37.500 18.75 0.00 45.45 2.10
8155 9671 2.485426 AGCAATGATTCACGTTCTGGTG 59.515 45.455 0.00 0.00 39.29 4.17
8183 9699 1.546029 GGGGAAATGTGCTTTGAGGTC 59.454 52.381 0.00 0.00 0.00 3.85
8236 9752 5.966853 AAGGAAAATGGTTCCCTCAAAAA 57.033 34.783 1.46 0.00 39.39 1.94
8237 9753 6.140377 ACTAAGGAAAATGGTTCCCTCAAAA 58.860 36.000 1.46 0.00 39.39 2.44
8238 9754 5.711698 ACTAAGGAAAATGGTTCCCTCAAA 58.288 37.500 1.46 0.00 39.39 2.69
8239 9755 5.333566 ACTAAGGAAAATGGTTCCCTCAA 57.666 39.130 1.46 0.00 39.39 3.02
8240 9756 5.333566 AACTAAGGAAAATGGTTCCCTCA 57.666 39.130 1.46 0.00 39.39 3.86
8241 9757 6.266786 TCAAAACTAAGGAAAATGGTTCCCTC 59.733 38.462 1.46 0.00 39.39 4.30
8242 9758 6.140377 TCAAAACTAAGGAAAATGGTTCCCT 58.860 36.000 1.46 0.00 39.39 4.20
8243 9759 6.413783 TCAAAACTAAGGAAAATGGTTCCC 57.586 37.500 1.46 0.00 39.39 3.97
8244 9760 8.725405 TTTTCAAAACTAAGGAAAATGGTTCC 57.275 30.769 0.00 0.00 36.06 3.62
8245 9761 9.594478 TCTTTTCAAAACTAAGGAAAATGGTTC 57.406 29.630 0.00 0.00 39.13 3.62
8246 9762 9.952030 TTCTTTTCAAAACTAAGGAAAATGGTT 57.048 25.926 0.00 0.00 39.13 3.67
8247 9763 9.952030 TTTCTTTTCAAAACTAAGGAAAATGGT 57.048 25.926 0.00 0.00 39.13 3.55
8256 9772 8.614994 TCGCTTTCTTTCTTTTCAAAACTAAG 57.385 30.769 0.00 0.00 0.00 2.18
8432 9976 1.268352 CGGAATTGAGGTCGCCAAAAA 59.732 47.619 0.00 0.00 0.00 1.94
8433 9977 0.878416 CGGAATTGAGGTCGCCAAAA 59.122 50.000 0.00 0.00 0.00 2.44
8434 9978 0.250553 ACGGAATTGAGGTCGCCAAA 60.251 50.000 0.00 0.00 0.00 3.28
8435 9979 0.953471 CACGGAATTGAGGTCGCCAA 60.953 55.000 0.00 0.00 0.00 4.52
8436 9980 1.375396 CACGGAATTGAGGTCGCCA 60.375 57.895 0.00 0.00 0.00 5.69
8437 9981 2.750888 GCACGGAATTGAGGTCGCC 61.751 63.158 0.00 0.00 0.00 5.54
8438 9982 2.750888 GGCACGGAATTGAGGTCGC 61.751 63.158 0.00 0.00 0.00 5.19
8439 9983 0.174845 TAGGCACGGAATTGAGGTCG 59.825 55.000 0.00 0.00 0.00 4.79
8440 9984 1.066430 TGTAGGCACGGAATTGAGGTC 60.066 52.381 0.00 0.00 0.00 3.85
8441 9985 0.981183 TGTAGGCACGGAATTGAGGT 59.019 50.000 0.00 0.00 0.00 3.85
8442 9986 1.207089 TCTGTAGGCACGGAATTGAGG 59.793 52.381 0.00 0.00 37.11 3.86
8443 9987 2.672961 TCTGTAGGCACGGAATTGAG 57.327 50.000 0.00 0.00 37.11 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.