Multiple sequence alignment - TraesCS4B01G115100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G115100 chr4B 100.000 8461 0 0 1 8461 131714471 131706011 0.000000e+00 15625.0
1 TraesCS4B01G115100 chr4B 87.342 474 38 13 1678 2143 131711016 131710557 2.710000e-144 523.0
2 TraesCS4B01G115100 chr4B 87.342 474 38 13 3456 3915 131712794 131712329 2.710000e-144 523.0
3 TraesCS4B01G115100 chr4B 85.652 460 42 12 2202 2659 131711095 131710658 5.980000e-126 462.0
4 TraesCS4B01G115100 chr4B 85.652 460 42 12 3377 3814 131712270 131711813 5.980000e-126 462.0
5 TraesCS4B01G115100 chr4B 88.329 377 29 10 1679 2041 131712188 131711813 1.010000e-118 438.0
6 TraesCS4B01G115100 chr4B 88.329 377 29 10 2284 2659 131712793 131712431 1.010000e-118 438.0
7 TraesCS4B01G115100 chr4B 97.987 149 3 0 2744 2892 371971696 371971844 8.430000e-65 259.0
8 TraesCS4B01G115100 chr4B 98.630 146 1 1 2747 2892 68067745 68067601 3.030000e-64 257.0
9 TraesCS4B01G115100 chr4B 97.710 131 1 1 7512 7642 82019250 82019122 3.070000e-54 224.0
10 TraesCS4B01G115100 chr4B 94.366 142 3 4 7512 7651 653214420 653214282 6.650000e-51 213.0
11 TraesCS4B01G115100 chr4B 93.750 80 5 0 2141 2220 406681541 406681620 4.150000e-23 121.0
12 TraesCS4B01G115100 chr4A 95.965 3346 100 17 4194 7515 488531713 488535047 0.000000e+00 5398.0
13 TraesCS4B01G115100 chr4A 93.750 1792 56 32 389 2144 488528268 488530039 0.000000e+00 2638.0
14 TraesCS4B01G115100 chr4A 93.694 999 47 7 3126 4120 488530727 488531713 0.000000e+00 1482.0
15 TraesCS4B01G115100 chr4A 95.859 821 33 1 7641 8461 488535046 488535865 0.000000e+00 1327.0
16 TraesCS4B01G115100 chr4A 94.286 525 19 5 2186 2699 488530040 488530564 0.000000e+00 793.0
17 TraesCS4B01G115100 chr4A 90.888 428 32 5 1 424 488504733 488505157 1.230000e-157 568.0
18 TraesCS4B01G115100 chr4A 84.364 582 54 15 3269 3814 488529934 488530514 3.480000e-148 536.0
19 TraesCS4B01G115100 chr4A 85.595 479 45 11 3453 3915 488529568 488530038 1.650000e-131 481.0
20 TraesCS4B01G115100 chr4A 85.653 467 44 9 1678 2140 488531060 488531507 3.580000e-128 470.0
21 TraesCS4B01G115100 chr4A 88.714 381 30 7 2281 2659 488529568 488529937 3.600000e-123 453.0
22 TraesCS4B01G115100 chr4A 85.185 459 40 14 2202 2659 488530978 488531409 6.030000e-121 446.0
23 TraesCS4B01G115100 chr4A 88.391 379 31 8 1676 2041 488530136 488530514 2.170000e-120 444.0
24 TraesCS4B01G115100 chr4A 92.045 176 10 4 2890 3062 642447331 642447505 2.360000e-60 244.0
25 TraesCS4B01G115100 chr4A 92.053 151 8 3 7512 7660 735751901 735752049 8.610000e-50 209.0
26 TraesCS4B01G115100 chr4A 90.805 87 4 1 4122 4204 735552502 735552416 6.940000e-21 113.0
27 TraesCS4B01G115100 chr4A 96.364 55 2 0 1211 1265 597780259 597780313 3.250000e-14 91.6
28 TraesCS4B01G115100 chr4A 92.727 55 3 1 3913 3967 488531001 488531054 2.530000e-10 78.7
29 TraesCS4B01G115100 chr4A 89.583 48 2 3 389 433 488528228 488528275 3.300000e-04 58.4
30 TraesCS4B01G115100 chr4D 96.578 2221 64 4 5291 7502 93452708 93450491 0.000000e+00 3670.0
31 TraesCS4B01G115100 chr4D 95.217 1610 59 9 1063 2659 93457066 93455462 0.000000e+00 2531.0
32 TraesCS4B01G115100 chr4D 94.379 1103 34 12 3045 4123 93454819 93453721 0.000000e+00 1668.0
33 TraesCS4B01G115100 chr4D 91.500 1000 37 17 1678 2662 93455836 93454870 0.000000e+00 1332.0
34 TraesCS4B01G115100 chr4D 96.523 604 20 1 7858 8461 93439404 93438802 0.000000e+00 998.0
35 TraesCS4B01G115100 chr4D 91.376 603 21 11 387 976 93457968 93457384 0.000000e+00 797.0
36 TraesCS4B01G115100 chr4D 96.617 473 12 2 4194 4666 93453724 93453256 0.000000e+00 782.0
37 TraesCS4B01G115100 chr4D 97.549 408 7 3 4671 5076 93453190 93452784 0.000000e+00 695.0
38 TraesCS4B01G115100 chr4D 87.884 553 43 12 3377 3907 93455919 93455369 5.570000e-176 628.0
39 TraesCS4B01G115100 chr4D 90.971 443 26 9 1 433 93458433 93457995 1.220000e-162 584.0
40 TraesCS4B01G115100 chr4D 88.186 474 44 12 1678 2143 93454404 93453935 9.600000e-154 555.0
41 TraesCS4B01G115100 chr4D 88.069 461 43 9 2202 2659 93454487 93454036 3.480000e-148 536.0
42 TraesCS4B01G115100 chr4D 86.279 481 37 11 3456 3915 93456450 93455978 5.900000e-136 496.0
43 TraesCS4B01G115100 chr4D 87.990 383 27 10 2284 2659 93456449 93456079 1.300000e-117 435.0
44 TraesCS4B01G115100 chr4D 86.772 378 23 11 1678 2041 93455237 93454873 6.150000e-106 396.0
45 TraesCS4B01G115100 chr4D 86.638 232 31 0 3045 3276 212031949 212032180 3.030000e-64 257.0
46 TraesCS4B01G115100 chr4D 93.452 168 11 0 7696 7863 93441873 93441706 5.070000e-62 250.0
47 TraesCS4B01G115100 chr4D 96.154 130 3 1 7513 7642 454424617 454424744 2.390000e-50 211.0
48 TraesCS4B01G115100 chr4D 96.124 129 2 1 7514 7642 344231840 344231965 3.100000e-49 207.0
49 TraesCS4B01G115100 chr4D 92.308 143 7 3 7510 7651 58389382 58389243 5.180000e-47 200.0
50 TraesCS4B01G115100 chr4D 95.506 89 3 1 2038 2126 93454595 93454508 3.180000e-29 141.0
51 TraesCS4B01G115100 chr4D 95.455 88 4 0 3269 3356 93456082 93455995 3.180000e-29 141.0
52 TraesCS4B01G115100 chr4D 94.318 88 5 0 3269 3356 93455465 93455378 1.480000e-27 135.0
53 TraesCS4B01G115100 chr4D 95.122 82 3 1 4119 4200 43548868 43548948 2.480000e-25 128.0
54 TraesCS4B01G115100 chr4D 94.805 77 0 1 5178 5254 93452781 93452709 5.370000e-22 117.0
55 TraesCS4B01G115100 chr4D 93.421 76 4 1 4122 4197 43548945 43548871 2.500000e-20 111.0
56 TraesCS4B01G115100 chr4D 88.506 87 10 0 2142 2228 450203706 450203792 1.160000e-18 106.0
57 TraesCS4B01G115100 chr4D 91.892 74 6 0 2154 2227 450203779 450203706 4.180000e-18 104.0
58 TraesCS4B01G115100 chr4D 98.305 59 0 1 7641 7699 93447562 93447505 1.500000e-17 102.0
59 TraesCS4B01G115100 chr4D 86.316 95 4 3 4119 4204 10971618 10971524 2.510000e-15 95.3
60 TraesCS4B01G115100 chr4D 88.571 70 7 1 4122 4191 360939761 360939829 5.440000e-12 84.2
61 TraesCS4B01G115100 chr4D 88.235 68 8 0 2140 2207 197771998 197771931 1.960000e-11 82.4
62 TraesCS4B01G115100 chr4D 100.000 43 0 0 391 433 93458000 93457958 7.040000e-11 80.5
63 TraesCS4B01G115100 chr4D 81.651 109 9 5 4117 4216 182071805 182071699 7.040000e-11 80.5
64 TraesCS4B01G115100 chr4D 82.828 99 6 6 4111 4198 322674951 322674853 2.530000e-10 78.7
65 TraesCS4B01G115100 chr4D 84.444 90 3 7 4122 4201 434161614 434161702 2.530000e-10 78.7
66 TraesCS4B01G115100 chr2B 91.126 293 19 3 1332 1617 610243552 610243844 2.860000e-104 390.0
67 TraesCS4B01G115100 chr2B 98.630 146 2 0 2747 2892 650110604 650110749 8.430000e-65 259.0
68 TraesCS4B01G115100 chr2B 91.379 174 13 2 2890 3061 679054959 679054786 3.950000e-58 237.0
69 TraesCS4B01G115100 chr2B 93.878 147 4 4 7499 7644 597447 597589 5.140000e-52 217.0
70 TraesCS4B01G115100 chr2B 92.045 88 7 0 2141 2228 764537698 764537611 3.210000e-24 124.0
71 TraesCS4B01G115100 chr2B 90.426 94 8 1 2142 2235 764537612 764537704 1.150000e-23 122.0
72 TraesCS4B01G115100 chr2B 92.857 84 5 1 4119 4201 614917138 614917221 4.150000e-23 121.0
73 TraesCS4B01G115100 chr7D 88.444 225 25 1 3045 3269 563897733 563897956 3.890000e-68 270.0
74 TraesCS4B01G115100 chr7D 90.909 88 8 0 2140 2227 419793200 419793113 1.490000e-22 119.0
75 TraesCS4B01G115100 chr7D 84.848 66 6 3 2634 2699 54839941 54840002 7.090000e-06 63.9
76 TraesCS4B01G115100 chr2D 88.584 219 25 0 3045 3263 126681362 126681580 5.040000e-67 267.0
77 TraesCS4B01G115100 chr2D 94.969 159 7 1 2890 3047 204855862 204856020 1.820000e-61 248.0
78 TraesCS4B01G115100 chr2D 94.937 158 7 1 2890 3046 284560018 284560175 6.560000e-61 246.0
79 TraesCS4B01G115100 chr2D 95.683 139 3 2 7505 7642 445188584 445188720 3.980000e-53 220.0
80 TraesCS4B01G115100 chr2D 93.023 86 5 1 2142 2227 459300641 459300557 3.210000e-24 124.0
81 TraesCS4B01G115100 chr2D 98.529 68 0 1 2690 2756 546434222 546434289 1.490000e-22 119.0
82 TraesCS4B01G115100 chr2D 90.361 83 4 4 2676 2756 624793703 624793623 1.160000e-18 106.0
83 TraesCS4B01G115100 chr2A 100.000 144 0 0 2749 2892 748456871 748456728 5.040000e-67 267.0
84 TraesCS4B01G115100 chr2A 89.815 108 5 2 1332 1433 687145171 687145064 5.330000e-27 134.0
85 TraesCS4B01G115100 chr2A 89.091 110 6 3 1330 1433 663485361 663485252 1.920000e-26 132.0
86 TraesCS4B01G115100 chr2A 93.243 74 0 3 2683 2756 374720170 374720238 4.180000e-18 104.0
87 TraesCS4B01G115100 chr2A 96.364 55 2 0 1211 1265 663485446 663485392 3.250000e-14 91.6
88 TraesCS4B01G115100 chr7B 100.000 142 0 0 2751 2892 372344664 372344523 6.510000e-66 263.0
89 TraesCS4B01G115100 chr7B 86.134 238 30 3 3045 3281 641068013 641067778 3.920000e-63 254.0
90 TraesCS4B01G115100 chr7B 93.865 163 8 2 2890 3051 117015375 117015214 2.360000e-60 244.0
91 TraesCS4B01G115100 chr7B 96.324 136 3 2 7507 7642 89765771 89765904 1.110000e-53 222.0
92 TraesCS4B01G115100 chr7B 94.406 143 4 4 7505 7646 635489334 635489473 5.140000e-52 217.0
93 TraesCS4B01G115100 chr7B 85.366 123 11 3 1324 1439 13164111 13163989 4.150000e-23 121.0
94 TraesCS4B01G115100 chr6B 87.611 226 26 2 3045 3269 368464794 368464570 2.340000e-65 261.0
95 TraesCS4B01G115100 chr6B 96.269 134 3 1 7512 7645 641950697 641950828 1.430000e-52 219.0
96 TraesCS4B01G115100 chr6B 95.620 137 4 2 7514 7650 716890470 716890336 1.430000e-52 219.0
97 TraesCS4B01G115100 chr5A 95.706 163 5 2 2890 3051 709418077 709417916 2.340000e-65 261.0
98 TraesCS4B01G115100 chr5A 93.706 143 5 3 7501 7642 658989002 658989141 2.390000e-50 211.0
99 TraesCS4B01G115100 chr5A 98.413 63 1 0 2694 2756 310350846 310350908 2.500000e-20 111.0
100 TraesCS4B01G115100 chr5A 93.750 48 3 0 2663 2710 669570113 669570160 1.180000e-08 73.1
101 TraesCS4B01G115100 chr6A 100.000 140 0 0 2753 2892 360513218 360513079 8.430000e-65 259.0
102 TraesCS4B01G115100 chr6A 96.899 129 2 1 7514 7642 595074232 595074358 1.850000e-51 215.0
103 TraesCS4B01G115100 chr6A 96.154 130 3 1 7513 7642 473422118 473421991 2.390000e-50 211.0
104 TraesCS4B01G115100 chr6A 94.245 139 5 3 7514 7651 116945393 116945529 8.610000e-50 209.0
105 TraesCS4B01G115100 chr6A 89.535 86 8 1 2142 2227 33306977 33306893 3.230000e-19 108.0
106 TraesCS4B01G115100 chr6A 92.000 75 4 1 2684 2756 23330251 23330325 4.180000e-18 104.0
107 TraesCS4B01G115100 chr3D 87.069 232 27 3 3045 3276 14382964 14382736 8.430000e-65 259.0
108 TraesCS4B01G115100 chr3D 87.225 227 29 0 3045 3271 435711114 435711340 8.430000e-65 259.0
109 TraesCS4B01G115100 chr3D 93.750 144 7 2 7507 7650 7920984 7921125 1.850000e-51 215.0
110 TraesCS4B01G115100 chr3D 91.011 89 8 0 2140 2228 472405093 472405005 4.150000e-23 121.0
111 TraesCS4B01G115100 chr3D 88.889 90 6 2 4112 4198 457400874 457400786 3.230000e-19 108.0
112 TraesCS4B01G115100 chr3B 100.000 140 0 0 2753 2892 820904666 820904527 8.430000e-65 259.0
113 TraesCS4B01G115100 chr3B 96.296 135 3 1 7510 7644 40625391 40625523 3.980000e-53 220.0
114 TraesCS4B01G115100 chr3B 96.970 132 2 1 7512 7643 797463870 797463999 3.980000e-53 220.0
115 TraesCS4B01G115100 chr3B 87.805 123 8 3 1324 1439 786271850 786271972 4.120000e-28 137.0
116 TraesCS4B01G115100 chr3B 91.860 86 5 2 4117 4200 5175446 5175531 1.490000e-22 119.0
117 TraesCS4B01G115100 chr3B 83.117 77 3 7 2628 2699 551398864 551398793 2.550000e-05 62.1
118 TraesCS4B01G115100 chr1A 97.386 153 2 2 2741 2892 292063144 292062993 8.430000e-65 259.0
119 TraesCS4B01G115100 chr1A 96.124 129 3 1 7514 7642 24469010 24469136 8.610000e-50 209.0
120 TraesCS4B01G115100 chr1A 96.124 129 3 1 7514 7642 497228281 497228155 8.610000e-50 209.0
121 TraesCS4B01G115100 chr1A 95.489 133 3 2 7514 7646 505092519 505092390 8.610000e-50 209.0
122 TraesCS4B01G115100 chr1A 94.776 134 5 1 7511 7644 481650972 481651103 3.100000e-49 207.0
123 TraesCS4B01G115100 chr1A 89.474 95 3 7 2142 2232 245526650 245526559 6.940000e-21 113.0
124 TraesCS4B01G115100 chr1A 100.000 61 0 0 2696 2756 452450240 452450300 6.940000e-21 113.0
125 TraesCS4B01G115100 chr1A 89.773 88 6 2 4118 4202 579834386 579834299 8.980000e-20 110.0
126 TraesCS4B01G115100 chr1A 94.286 70 4 0 2159 2228 459515779 459515848 3.230000e-19 108.0
127 TraesCS4B01G115100 chr1A 86.458 96 8 4 4107 4198 24591504 24591598 5.400000e-17 100.0
128 TraesCS4B01G115100 chr1A 86.458 96 8 4 4107 4198 24607251 24607345 5.400000e-17 100.0
129 TraesCS4B01G115100 chr1A 86.458 96 8 4 4107 4198 24610934 24611028 5.400000e-17 100.0
130 TraesCS4B01G115100 chr1A 86.458 96 8 4 4107 4198 24654596 24654690 5.400000e-17 100.0
131 TraesCS4B01G115100 chr1A 86.458 96 7 5 4107 4198 24740546 24740639 5.400000e-17 100.0
132 TraesCS4B01G115100 chr1B 95.679 162 3 4 2735 2892 641616864 641617025 3.030000e-64 257.0
133 TraesCS4B01G115100 chr1B 91.860 172 12 2 2890 3060 336784829 336784659 1.100000e-58 239.0
134 TraesCS4B01G115100 chr1B 96.269 134 3 2 7510 7642 41085219 41085087 1.430000e-52 219.0
135 TraesCS4B01G115100 chr1B 95.620 137 4 1 7506 7642 623397570 623397436 1.430000e-52 219.0
136 TraesCS4B01G115100 chr1B 96.923 130 2 1 7513 7642 649332729 649332856 5.140000e-52 217.0
137 TraesCS4B01G115100 chr1B 96.212 132 3 1 7511 7642 601258972 601258843 1.850000e-51 215.0
138 TraesCS4B01G115100 chr1B 96.212 132 3 2 7513 7644 646782456 646782585 1.850000e-51 215.0
139 TraesCS4B01G115100 chr1B 96.899 129 2 2 7514 7642 650049979 650050105 1.850000e-51 215.0
140 TraesCS4B01G115100 chr1B 94.245 139 6 1 7514 7652 543038902 543038766 2.390000e-50 211.0
141 TraesCS4B01G115100 chr1B 93.103 87 6 0 2142 2228 493871965 493871879 2.480000e-25 128.0
142 TraesCS4B01G115100 chr1B 91.860 86 7 0 2142 2227 493871880 493871965 4.150000e-23 121.0
143 TraesCS4B01G115100 chr1B 85.345 116 11 3 1324 1433 152509696 152509811 1.930000e-21 115.0
144 TraesCS4B01G115100 chr1B 98.413 63 1 0 2694 2756 455204882 455204820 2.500000e-20 111.0
145 TraesCS4B01G115100 chr1B 90.588 85 4 2 2142 2226 329485303 329485223 8.980000e-20 110.0
146 TraesCS4B01G115100 chr1B 97.826 46 1 0 2664 2709 116117551 116117506 7.040000e-11 80.5
147 TraesCS4B01G115100 chr1B 92.727 55 4 0 1211 1265 152509617 152509671 7.040000e-11 80.5
148 TraesCS4B01G115100 chr1B 87.755 49 5 1 1211 1258 501628433 501628385 1.000000e-03 56.5
149 TraesCS4B01G115100 chr5D 94.969 159 7 1 2890 3047 421982428 421982586 1.820000e-61 248.0
150 TraesCS4B01G115100 chr5D 96.923 130 2 2 7514 7643 59944479 59944352 5.140000e-52 217.0
151 TraesCS4B01G115100 chr5D 96.923 130 2 1 7514 7643 126553368 126553241 5.140000e-52 217.0
152 TraesCS4B01G115100 chr5D 96.899 129 2 1 7516 7644 55850482 55850608 1.850000e-51 215.0
153 TraesCS4B01G115100 chr5D 96.899 129 2 1 7514 7642 179062935 179063061 1.850000e-51 215.0
154 TraesCS4B01G115100 chr5D 96.899 129 2 1 7514 7642 179777541 179777667 1.850000e-51 215.0
155 TraesCS4B01G115100 chr5D 90.805 87 7 1 2141 2227 539150920 539150835 1.930000e-21 115.0
156 TraesCS4B01G115100 chr5D 82.787 122 17 4 149 268 510619820 510619701 1.160000e-18 106.0
157 TraesCS4B01G115100 chr5D 85.849 106 6 8 4099 4199 402773350 402773451 4.180000e-18 104.0
158 TraesCS4B01G115100 chr7A 94.340 159 8 1 2890 3047 429734548 429734706 8.490000e-60 243.0
159 TraesCS4B01G115100 chr7A 94.194 155 5 4 2759 2913 187057380 187057230 5.110000e-57 233.0
160 TraesCS4B01G115100 chr7A 95.000 140 4 2 7510 7648 663538327 663538190 5.140000e-52 217.0
161 TraesCS4B01G115100 chr7A 93.506 77 5 0 4121 4197 32013213 32013137 1.930000e-21 115.0
162 TraesCS4B01G115100 chr7A 94.444 72 4 0 1362 1433 588527586 588527515 2.500000e-20 111.0
163 TraesCS4B01G115100 chr7A 92.000 50 3 1 2662 2710 19029367 19029416 1.520000e-07 69.4
164 TraesCS4B01G115100 chr7A 87.755 49 5 1 1211 1258 731415486 731415438 1.000000e-03 56.5
165 TraesCS4B01G115100 chr5B 96.296 135 2 2 7508 7642 224325667 224325536 1.430000e-52 219.0
166 TraesCS4B01G115100 chr5B 92.000 150 8 3 7504 7652 354738011 354738157 3.100000e-49 207.0
167 TraesCS4B01G115100 chr5B 91.954 87 7 0 2142 2228 215889768 215889682 1.150000e-23 122.0
168 TraesCS4B01G115100 chr5B 90.323 93 9 0 2142 2234 706306964 706306872 1.150000e-23 122.0
169 TraesCS4B01G115100 chr5B 89.888 89 7 2 4111 4197 670532805 670532717 6.940000e-21 113.0
170 TraesCS4B01G115100 chrUn 96.899 129 2 1 7514 7642 16890326 16890452 1.850000e-51 215.0
171 TraesCS4B01G115100 chrUn 96.899 129 2 1 7514 7642 322720410 322720536 1.850000e-51 215.0
172 TraesCS4B01G115100 chrUn 96.183 131 3 1 7514 7644 191163308 191163436 6.650000e-51 213.0
173 TraesCS4B01G115100 chrUn 94.737 133 4 3 7514 7644 24321448 24321317 4.000000e-48 204.0
174 TraesCS4B01G115100 chrUn 94.737 133 4 3 7514 7644 24349054 24349185 4.000000e-48 204.0
175 TraesCS4B01G115100 chrUn 95.349 129 4 1 7514 7642 52994438 52994564 4.000000e-48 204.0
176 TraesCS4B01G115100 chrUn 95.349 129 4 1 7514 7642 263456365 263456491 4.000000e-48 204.0
177 TraesCS4B01G115100 chrUn 94.697 132 4 1 7512 7643 23715140 23715012 1.440000e-47 202.0
178 TraesCS4B01G115100 chrUn 95.349 129 3 2 7514 7642 325406875 325407000 1.440000e-47 202.0
179 TraesCS4B01G115100 chrUn 94.656 131 5 1 7513 7643 404803918 404804046 1.440000e-47 202.0
180 TraesCS4B01G115100 chrUn 93.431 137 5 4 7504 7639 202167761 202167894 5.180000e-47 200.0
181 TraesCS4B01G115100 chrUn 93.431 137 5 4 7504 7639 202188946 202189079 5.180000e-47 200.0
182 TraesCS4B01G115100 chrUn 92.857 140 6 4 7504 7642 210626775 210626639 5.180000e-47 200.0
183 TraesCS4B01G115100 chrUn 92.857 140 6 4 7504 7642 384230281 384230145 5.180000e-47 200.0
184 TraesCS4B01G115100 chrUn 85.185 108 7 6 4110 4209 23609467 23609573 1.500000e-17 102.0
185 TraesCS4B01G115100 chrUn 88.750 80 6 3 2132 2209 39289074 39289152 2.510000e-15 95.3
186 TraesCS4B01G115100 chrUn 85.417 96 5 3 4114 4200 23900845 23900940 3.250000e-14 91.6
187 TraesCS4B01G115100 chrUn 87.209 86 2 3 4121 4197 119047628 119047543 1.170000e-13 89.8
188 TraesCS4B01G115100 chrUn 92.982 57 4 0 2153 2209 89395832 89395776 5.440000e-12 84.2
189 TraesCS4B01G115100 chrUn 85.393 89 4 3 4118 4197 163394524 163394436 5.440000e-12 84.2
190 TraesCS4B01G115100 chrUn 85.393 89 4 3 4118 4197 325472536 325472448 5.440000e-12 84.2
191 TraesCS4B01G115100 chrUn 85.393 89 4 3 4118 4197 384522786 384522698 5.440000e-12 84.2
192 TraesCS4B01G115100 chrUn 83.158 95 7 3 4112 4197 17148693 17148599 2.530000e-10 78.7
193 TraesCS4B01G115100 chrUn 85.135 74 11 0 2142 2215 328264403 328264476 9.110000e-10 76.8
194 TraesCS4B01G115100 chrUn 82.979 94 5 6 4114 4197 94807241 94807333 3.280000e-09 75.0
195 TraesCS4B01G115100 chrUn 82.796 93 5 7 4119 4201 397151969 397152060 1.180000e-08 73.1
196 TraesCS4B01G115100 chrUn 84.722 72 9 1 4122 4193 5357381 5357450 4.240000e-08 71.3
197 TraesCS4B01G115100 chrUn 90.741 54 2 2 2653 2705 47066531 47066582 1.520000e-07 69.4
198 TraesCS4B01G115100 chrUn 100.000 37 0 0 4121 4157 63534334 63534370 1.520000e-07 69.4
199 TraesCS4B01G115100 chrUn 95.455 44 1 1 2663 2705 288710981 288710938 1.520000e-07 69.4
200 TraesCS4B01G115100 chrUn 82.222 90 5 6 4122 4201 378270652 378270564 5.480000e-07 67.6
201 TraesCS4B01G115100 chrUn 81.720 93 6 6 4119 4201 447954259 447954350 5.480000e-07 67.6
202 TraesCS4B01G115100 chrUn 81.319 91 6 7 4122 4202 68883268 68883357 7.090000e-06 63.9
203 TraesCS4B01G115100 chrUn 80.645 93 7 6 4119 4201 320620066 320620157 2.550000e-05 62.1
204 TraesCS4B01G115100 chrUn 100.000 32 0 0 145 176 44274038 44274069 9.170000e-05 60.2
205 TraesCS4B01G115100 chrUn 100.000 32 0 0 145 176 44306380 44306411 9.170000e-05 60.2
206 TraesCS4B01G115100 chrUn 97.143 35 1 0 145 179 44491552 44491518 9.170000e-05 60.2
207 TraesCS4B01G115100 chrUn 97.143 35 1 0 145 179 44526765 44526731 9.170000e-05 60.2
208 TraesCS4B01G115100 chrUn 91.111 45 2 2 4166 4208 282966086 282966042 9.170000e-05 60.2
209 TraesCS4B01G115100 chrUn 89.583 48 3 2 4155 4201 374250494 374250540 9.170000e-05 60.2
210 TraesCS4B01G115100 chrUn 100.000 28 0 0 4172 4199 299903267 299903294 1.500000e-02 52.8
211 TraesCS4B01G115100 chr1D 96.899 129 2 1 7514 7642 324990914 324991040 1.850000e-51 215.0
212 TraesCS4B01G115100 chr1D 95.385 130 4 1 7514 7643 96916536 96916663 1.110000e-48 206.0
213 TraesCS4B01G115100 chr1D 87.500 88 11 0 2141 2228 253346941 253346854 1.500000e-17 102.0
214 TraesCS4B01G115100 chr1D 83.962 106 11 5 4121 4226 74410542 74410443 6.990000e-16 97.1
215 TraesCS4B01G115100 chr6D 96.124 129 3 1 7514 7642 39801372 39801498 8.610000e-50 209.0
216 TraesCS4B01G115100 chr6D 94.318 88 5 0 2141 2228 292073458 292073371 1.480000e-27 135.0
217 TraesCS4B01G115100 chr6D 95.775 71 1 2 2686 2756 469274381 469274449 6.940000e-21 113.0
218 TraesCS4B01G115100 chr6D 89.773 88 6 2 4118 4204 63834810 63834725 8.980000e-20 110.0
219 TraesCS4B01G115100 chr6D 91.250 80 5 2 4118 4197 298214003 298214080 3.230000e-19 108.0
220 TraesCS4B01G115100 chr6D 89.655 87 6 2 2141 2227 304279495 304279412 3.230000e-19 108.0
221 TraesCS4B01G115100 chr6D 88.506 87 2 4 4119 4197 87367648 87367562 1.940000e-16 99.0
222 TraesCS4B01G115100 chr6D 88.889 81 5 1 4122 4198 207268030 207267950 6.990000e-16 97.1
223 TraesCS4B01G115100 chr6D 86.517 89 8 4 2141 2227 324886789 324886703 2.510000e-15 95.3
224 TraesCS4B01G115100 chr6D 87.302 63 4 3 4096 4157 3854052 3854111 1.520000e-07 69.4
225 TraesCS4B01G115100 chr3A 94.318 88 4 1 2141 2228 679696559 679696645 5.330000e-27 134.0
226 TraesCS4B01G115100 chr3A 87.931 116 8 2 1324 1433 625657681 625657566 1.920000e-26 132.0
227 TraesCS4B01G115100 chr3A 91.011 89 3 4 2668 2756 589907620 589907703 1.930000e-21 115.0
228 TraesCS4B01G115100 chr3A 93.056 72 5 0 1362 1433 731919029 731918958 1.160000e-18 106.0
229 TraesCS4B01G115100 chr3A 92.727 55 4 0 1211 1265 625657760 625657706 7.040000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G115100 chr4B 131706011 131714471 8460 True 2638.714286 15625 88.949429 1 8461 7 chr4B.!!$R4 8460
1 TraesCS4B01G115100 chr4A 488528228 488535865 7637 False 1123.469231 5398 90.289692 389 8461 13 chr4A.!!$F5 8072
2 TraesCS4B01G115100 chr4D 93447505 93458433 10928 True 791.075000 3670 92.887800 1 7699 20 chr4D.!!$R9 7698
3 TraesCS4B01G115100 chr4D 93438802 93441873 3071 True 624.000000 998 94.987500 7696 8461 2 chr4D.!!$R8 765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 253 0.378962 CACAACCGCGTTCTTTTCCA 59.621 50.000 4.92 0.0 0.00 3.53 F
247 254 0.379316 ACAACCGCGTTCTTTTCCAC 59.621 50.000 4.92 0.0 0.00 4.02 F
1790 2134 0.179111 TGGCGATCTGCTTTAGTCCG 60.179 55.000 8.94 0.0 45.43 4.79 F
2483 3433 1.222300 CCGTTGTCATTGTCGGTTCA 58.778 50.000 0.00 0.0 38.45 3.18 F
3569 4623 0.039618 TGGATTTGGGGGTCTGCTTC 59.960 55.000 0.00 0.0 0.00 3.86 F
4364 5440 1.048160 TGGCATAGCGGAGTGATGGA 61.048 55.000 0.00 0.0 0.00 3.41 F
4655 5733 1.063717 AGCCTGTGTTATGGGGAATGG 60.064 52.381 0.00 0.0 0.00 3.16 F
6165 7317 1.072331 CCCTGAGCAACACTGGTTAGT 59.928 52.381 0.00 0.0 35.47 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1721 2062 0.249489 GGAGCAGTACCATAGGCACG 60.249 60.000 0.00 0.0 0.00 5.34 R
2211 3161 0.824182 AAGCTACTCCCTCCGATCCG 60.824 60.000 0.00 0.0 0.00 4.18 R
2718 3685 0.102481 AGGTATACGCGCAGGACTTG 59.898 55.000 5.73 0.0 0.00 3.16 R
4181 5256 0.106167 CATCTACTCCCTCCGTCCCA 60.106 60.000 0.00 0.0 0.00 4.37 R
5367 6519 0.381801 GCTTGCCCCATTATGTGTCG 59.618 55.000 0.00 0.0 0.00 4.35 R
5891 7043 1.130054 AGCAAGTGAGAGGGGCAAGA 61.130 55.000 0.00 0.0 0.00 3.02 R
6311 7465 1.956477 GTGTTCATGTGAGGGCAAAGT 59.044 47.619 0.00 0.0 0.00 2.66 R
7619 11699 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.566833 TGTGCATACAGAGCTGGTTT 57.433 45.000 0.00 0.00 34.19 3.27
96 97 7.172361 GTCATATCTCCATTCTTCCAAGCTAAC 59.828 40.741 0.00 0.00 0.00 2.34
176 183 5.243730 AGGTGTGGGACATCAAGTTTTAATG 59.756 40.000 0.00 0.00 44.52 1.90
206 213 2.923121 ACTTCCATCCCACATGATTCG 58.077 47.619 0.00 0.00 0.00 3.34
216 223 2.819608 CCACATGATTCGAACTTGGGTT 59.180 45.455 0.00 0.00 38.52 4.11
242 249 1.063488 GTGCACAACCGCGTTCTTT 59.937 52.632 13.17 0.00 33.35 2.52
243 250 0.524604 GTGCACAACCGCGTTCTTTT 60.525 50.000 13.17 0.00 33.35 2.27
245 252 0.933047 GCACAACCGCGTTCTTTTCC 60.933 55.000 4.92 0.00 0.00 3.13
246 253 0.378962 CACAACCGCGTTCTTTTCCA 59.621 50.000 4.92 0.00 0.00 3.53
247 254 0.379316 ACAACCGCGTTCTTTTCCAC 59.621 50.000 4.92 0.00 0.00 4.02
248 255 0.661020 CAACCGCGTTCTTTTCCACT 59.339 50.000 4.92 0.00 0.00 4.00
249 256 0.661020 AACCGCGTTCTTTTCCACTG 59.339 50.000 4.92 0.00 0.00 3.66
251 258 0.512952 CCGCGTTCTTTTCCACTGAG 59.487 55.000 4.92 0.00 0.00 3.35
252 259 0.512952 CGCGTTCTTTTCCACTGAGG 59.487 55.000 0.00 0.00 39.47 3.86
300 307 4.265073 CCTCTCGGGTTGATTTTCTTCAT 58.735 43.478 0.00 0.00 0.00 2.57
302 309 3.440173 TCTCGGGTTGATTTTCTTCATGC 59.560 43.478 0.00 0.00 0.00 4.06
309 316 1.130373 GATTTTCTTCATGCGGCGTGA 59.870 47.619 20.37 20.37 0.00 4.35
310 317 1.164411 TTTTCTTCATGCGGCGTGAT 58.836 45.000 24.21 0.00 0.00 3.06
372 379 4.039032 CGTGCAAATAGAAACCACGTTTT 58.961 39.130 0.00 0.00 42.86 2.43
374 381 5.038033 GTGCAAATAGAAACCACGTTTTCA 58.962 37.500 13.63 2.63 37.86 2.69
376 383 5.163602 TGCAAATAGAAACCACGTTTTCAGT 60.164 36.000 13.63 1.18 37.86 3.41
378 385 6.291585 GCAAATAGAAACCACGTTTTCAGTTG 60.292 38.462 13.63 13.95 37.86 3.16
379 386 6.687081 AATAGAAACCACGTTTTCAGTTGA 57.313 33.333 13.63 0.00 37.86 3.18
380 387 4.351131 AGAAACCACGTTTTCAGTTGAC 57.649 40.909 13.63 0.80 37.86 3.18
381 388 2.817538 AACCACGTTTTCAGTTGACG 57.182 45.000 0.00 0.00 42.13 4.35
383 390 2.891112 ACCACGTTTTCAGTTGACGTA 58.109 42.857 0.19 0.00 46.95 3.57
386 393 4.201744 ACCACGTTTTCAGTTGACGTAAAG 60.202 41.667 0.19 0.00 46.95 1.85
438 520 2.077687 ATGGGGCAATTCATGTCTCC 57.922 50.000 0.00 0.00 30.98 3.71
442 524 1.477558 GGGCAATTCATGTCTCCGGAT 60.478 52.381 3.57 0.00 32.85 4.18
467 549 9.801873 ATATGAAAACTGAAATATTGGAAACCG 57.198 29.630 0.00 0.00 0.00 4.44
496 578 4.148128 AGAGGATAATGTGGTTGCTCAG 57.852 45.455 0.00 0.00 31.01 3.35
583 667 4.084693 GGAAGACTTGTCCGTAAAGAAACG 60.085 45.833 0.00 0.00 42.49 3.60
584 668 2.798847 AGACTTGTCCGTAAAGAAACGC 59.201 45.455 0.00 0.00 41.51 4.84
585 669 2.540931 GACTTGTCCGTAAAGAAACGCA 59.459 45.455 0.00 0.00 41.51 5.24
586 670 2.937799 ACTTGTCCGTAAAGAAACGCAA 59.062 40.909 0.00 0.00 41.51 4.85
750 843 2.561569 CAGCCACTAAAATACTCGGGG 58.438 52.381 0.00 0.00 0.00 5.73
751 844 1.134189 AGCCACTAAAATACTCGGGGC 60.134 52.381 0.00 0.00 40.41 5.80
752 845 1.963172 CCACTAAAATACTCGGGGCC 58.037 55.000 0.00 0.00 0.00 5.80
753 846 1.578583 CACTAAAATACTCGGGGCCG 58.421 55.000 0.00 0.00 41.35 6.13
754 847 1.137479 CACTAAAATACTCGGGGCCGA 59.863 52.381 0.00 0.00 46.87 5.54
784 877 3.385384 CGAGAGGCCACCAGCTCA 61.385 66.667 5.01 0.00 43.05 4.26
827 922 2.642139 AATGACAGCCAAAATCGCAG 57.358 45.000 0.00 0.00 0.00 5.18
844 939 1.667236 CAGCAGAAATATCACGCCCA 58.333 50.000 0.00 0.00 0.00 5.36
883 978 2.067605 ACACGACACTCCACCCCAA 61.068 57.895 0.00 0.00 0.00 4.12
918 1015 0.744281 AAAACAAACCGGAGCAGTGG 59.256 50.000 9.46 0.00 0.00 4.00
921 1018 1.672356 CAAACCGGAGCAGTGGAGG 60.672 63.158 9.46 0.00 0.00 4.30
922 1019 1.841556 AAACCGGAGCAGTGGAGGA 60.842 57.895 9.46 0.00 0.00 3.71
924 1021 3.465403 CCGGAGCAGTGGAGGAGG 61.465 72.222 0.00 0.00 0.00 4.30
925 1022 2.363018 CGGAGCAGTGGAGGAGGA 60.363 66.667 0.00 0.00 0.00 3.71
994 1100 0.387565 GTGCCTTCGATCCTCTCTCC 59.612 60.000 0.00 0.00 0.00 3.71
1043 1150 3.887110 CAGGGCTGCAGATATTTTCATCA 59.113 43.478 20.43 0.00 0.00 3.07
1055 1162 3.721087 TTTTCATCAGTTCCCCTCTCC 57.279 47.619 0.00 0.00 0.00 3.71
1058 1165 1.004891 ATCAGTTCCCCTCTCCCCC 59.995 63.158 0.00 0.00 0.00 5.40
1059 1166 1.541168 ATCAGTTCCCCTCTCCCCCT 61.541 60.000 0.00 0.00 0.00 4.79
1060 1167 1.690985 CAGTTCCCCTCTCCCCCTC 60.691 68.421 0.00 0.00 0.00 4.30
1061 1168 1.869452 AGTTCCCCTCTCCCCCTCT 60.869 63.158 0.00 0.00 0.00 3.69
1066 1403 2.018086 CCCTCTCCCCCTCTCCTCT 61.018 68.421 0.00 0.00 0.00 3.69
1068 1405 1.541672 CTCTCCCCCTCTCCTCTCC 59.458 68.421 0.00 0.00 0.00 3.71
1284 1621 4.382320 GGTACCGCGGTGAGCCAA 62.382 66.667 40.02 17.39 44.76 4.52
1410 1750 4.162690 GCGGACGGGATGAAGGCT 62.163 66.667 0.00 0.00 0.00 4.58
1712 2053 1.974957 TGCTTAACTGTGGTAGGCTGA 59.025 47.619 0.00 0.00 0.00 4.26
1721 2062 2.295909 TGTGGTAGGCTGATTTTTGTGC 59.704 45.455 0.00 0.00 0.00 4.57
1725 2066 0.318955 AGGCTGATTTTTGTGCGTGC 60.319 50.000 0.00 0.00 0.00 5.34
1748 2092 4.021016 CCTATGGTACTGCTCCTGGATAAC 60.021 50.000 0.00 0.00 0.00 1.89
1749 2093 3.116096 TGGTACTGCTCCTGGATAACT 57.884 47.619 0.00 0.00 0.00 2.24
1756 2100 2.237143 TGCTCCTGGATAACTGGAACTG 59.763 50.000 0.00 0.00 45.29 3.16
1790 2134 0.179111 TGGCGATCTGCTTTAGTCCG 60.179 55.000 8.94 0.00 45.43 4.79
1920 2270 7.586300 CGTGTCGTGTTTCTGAATCTTTTTAAT 59.414 33.333 0.00 0.00 0.00 1.40
2092 2443 6.235664 TGGGATTGAAGGTCTAACTTTACAC 58.764 40.000 0.00 0.00 0.00 2.90
2112 2463 6.603940 ACACGGGTACACTTTTAATAGGTA 57.396 37.500 0.00 0.00 0.00 3.08
2151 2502 2.873599 TCCTAATTAGGTACCCCCTCCA 59.126 50.000 27.14 4.95 44.81 3.86
2211 3161 8.075593 TGAACTAAAACCACGACACTTATTAC 57.924 34.615 0.00 0.00 0.00 1.89
2287 3237 8.511321 CGCAACTGCCTATAAATGGATATTTTA 58.489 33.333 0.00 0.00 36.44 1.52
2428 3378 3.262405 TCCCATGTCGGCTACTTTTAGTT 59.738 43.478 0.00 0.00 0.00 2.24
2483 3433 1.222300 CCGTTGTCATTGTCGGTTCA 58.778 50.000 0.00 0.00 38.45 3.18
2666 3628 3.649023 TGAGTACTTTGTAAGGCTGGGAA 59.351 43.478 0.00 0.00 0.00 3.97
2705 3672 6.782082 TCATGCATATGATACTACTCCCTC 57.218 41.667 6.97 0.00 38.37 4.30
2706 3673 5.658634 TCATGCATATGATACTACTCCCTCC 59.341 44.000 6.97 0.00 38.37 4.30
2707 3674 4.017126 TGCATATGATACTACTCCCTCCG 58.983 47.826 6.97 0.00 0.00 4.63
2708 3675 4.017808 GCATATGATACTACTCCCTCCGT 58.982 47.826 6.97 0.00 0.00 4.69
2709 3676 4.463186 GCATATGATACTACTCCCTCCGTT 59.537 45.833 6.97 0.00 0.00 4.44
2710 3677 5.047235 GCATATGATACTACTCCCTCCGTTT 60.047 44.000 6.97 0.00 0.00 3.60
2711 3678 6.622549 CATATGATACTACTCCCTCCGTTTC 58.377 44.000 0.00 0.00 0.00 2.78
2712 3679 3.972133 TGATACTACTCCCTCCGTTTCA 58.028 45.455 0.00 0.00 0.00 2.69
2713 3680 3.952323 TGATACTACTCCCTCCGTTTCAG 59.048 47.826 0.00 0.00 0.00 3.02
2714 3681 2.305858 ACTACTCCCTCCGTTTCAGT 57.694 50.000 0.00 0.00 0.00 3.41
2715 3682 2.606378 ACTACTCCCTCCGTTTCAGTT 58.394 47.619 0.00 0.00 0.00 3.16
2716 3683 2.970640 ACTACTCCCTCCGTTTCAGTTT 59.029 45.455 0.00 0.00 0.00 2.66
2717 3684 4.154942 ACTACTCCCTCCGTTTCAGTTTA 58.845 43.478 0.00 0.00 0.00 2.01
2718 3685 3.397849 ACTCCCTCCGTTTCAGTTTAC 57.602 47.619 0.00 0.00 0.00 2.01
2719 3686 2.701951 ACTCCCTCCGTTTCAGTTTACA 59.298 45.455 0.00 0.00 0.00 2.41
2720 3687 3.135167 ACTCCCTCCGTTTCAGTTTACAA 59.865 43.478 0.00 0.00 0.00 2.41
2721 3688 3.735591 TCCCTCCGTTTCAGTTTACAAG 58.264 45.455 0.00 0.00 0.00 3.16
2722 3689 3.135167 TCCCTCCGTTTCAGTTTACAAGT 59.865 43.478 0.00 0.00 0.00 3.16
2723 3690 3.497262 CCCTCCGTTTCAGTTTACAAGTC 59.503 47.826 0.00 0.00 0.00 3.01
2724 3691 3.497262 CCTCCGTTTCAGTTTACAAGTCC 59.503 47.826 0.00 0.00 0.00 3.85
2725 3692 4.377897 CTCCGTTTCAGTTTACAAGTCCT 58.622 43.478 0.00 0.00 0.00 3.85
2726 3693 4.124238 TCCGTTTCAGTTTACAAGTCCTG 58.876 43.478 0.00 0.00 0.00 3.86
2727 3694 3.303791 CCGTTTCAGTTTACAAGTCCTGC 60.304 47.826 0.00 0.00 0.00 4.85
2728 3695 3.603857 CGTTTCAGTTTACAAGTCCTGCG 60.604 47.826 0.00 0.00 0.00 5.18
2729 3696 1.508632 TCAGTTTACAAGTCCTGCGC 58.491 50.000 0.00 0.00 0.00 6.09
2730 3697 0.163788 CAGTTTACAAGTCCTGCGCG 59.836 55.000 0.00 0.00 0.00 6.86
2731 3698 0.249741 AGTTTACAAGTCCTGCGCGT 60.250 50.000 8.43 0.00 0.00 6.01
2732 3699 1.000060 AGTTTACAAGTCCTGCGCGTA 60.000 47.619 8.43 0.71 0.00 4.42
2733 3700 1.997606 GTTTACAAGTCCTGCGCGTAT 59.002 47.619 8.43 0.00 0.00 3.06
2734 3701 3.119388 AGTTTACAAGTCCTGCGCGTATA 60.119 43.478 8.43 0.00 0.00 1.47
2735 3702 2.480224 TACAAGTCCTGCGCGTATAC 57.520 50.000 8.43 4.74 0.00 1.47
2736 3703 0.179119 ACAAGTCCTGCGCGTATACC 60.179 55.000 8.43 0.00 0.00 2.73
2737 3704 0.102481 CAAGTCCTGCGCGTATACCT 59.898 55.000 8.43 0.00 0.00 3.08
2738 3705 1.335810 CAAGTCCTGCGCGTATACCTA 59.664 52.381 8.43 0.00 0.00 3.08
2739 3706 1.236628 AGTCCTGCGCGTATACCTAG 58.763 55.000 8.43 0.00 0.00 3.02
2740 3707 0.240411 GTCCTGCGCGTATACCTAGG 59.760 60.000 7.41 7.41 0.00 3.02
2741 3708 0.179009 TCCTGCGCGTATACCTAGGT 60.179 55.000 20.57 20.57 0.00 3.08
2742 3709 0.672342 CCTGCGCGTATACCTAGGTT 59.328 55.000 22.11 10.62 0.00 3.50
2743 3710 1.602165 CCTGCGCGTATACCTAGGTTG 60.602 57.143 22.11 9.15 0.00 3.77
2744 3711 0.249155 TGCGCGTATACCTAGGTTGC 60.249 55.000 22.11 17.41 0.00 4.17
2745 3712 0.942884 GCGCGTATACCTAGGTTGCC 60.943 60.000 22.11 7.02 0.00 4.52
2746 3713 0.386476 CGCGTATACCTAGGTTGCCA 59.614 55.000 22.11 1.21 0.00 4.92
2747 3714 1.202440 CGCGTATACCTAGGTTGCCAA 60.202 52.381 22.11 0.75 0.00 4.52
2748 3715 2.547218 CGCGTATACCTAGGTTGCCAAT 60.547 50.000 22.11 9.64 0.00 3.16
2749 3716 3.473625 GCGTATACCTAGGTTGCCAATT 58.526 45.455 22.11 0.00 0.00 2.32
2750 3717 3.881089 GCGTATACCTAGGTTGCCAATTT 59.119 43.478 22.11 0.00 0.00 1.82
2751 3718 4.337274 GCGTATACCTAGGTTGCCAATTTT 59.663 41.667 22.11 0.00 0.00 1.82
2752 3719 5.528320 GCGTATACCTAGGTTGCCAATTTTA 59.472 40.000 22.11 0.00 0.00 1.52
2753 3720 6.206048 GCGTATACCTAGGTTGCCAATTTTAT 59.794 38.462 22.11 5.71 0.00 1.40
2754 3721 7.572539 GCGTATACCTAGGTTGCCAATTTTATC 60.573 40.741 22.11 0.00 0.00 1.75
2755 3722 7.442969 CGTATACCTAGGTTGCCAATTTTATCA 59.557 37.037 22.11 0.00 0.00 2.15
2756 3723 9.127277 GTATACCTAGGTTGCCAATTTTATCAA 57.873 33.333 22.11 0.00 0.00 2.57
2757 3724 6.280855 ACCTAGGTTGCCAATTTTATCAAC 57.719 37.500 9.21 0.00 38.36 3.18
2758 3725 5.777732 ACCTAGGTTGCCAATTTTATCAACA 59.222 36.000 9.21 0.00 40.20 3.33
2759 3726 6.268847 ACCTAGGTTGCCAATTTTATCAACAA 59.731 34.615 9.21 0.00 40.20 2.83
2760 3727 6.589907 CCTAGGTTGCCAATTTTATCAACAAC 59.410 38.462 0.00 0.00 40.20 3.32
2761 3728 5.923204 AGGTTGCCAATTTTATCAACAACA 58.077 33.333 0.00 0.00 40.20 3.33
2762 3729 6.352516 AGGTTGCCAATTTTATCAACAACAA 58.647 32.000 0.00 0.00 40.20 2.83
2763 3730 6.259829 AGGTTGCCAATTTTATCAACAACAAC 59.740 34.615 0.00 0.00 40.20 3.32
2764 3731 6.037610 GGTTGCCAATTTTATCAACAACAACA 59.962 34.615 0.00 0.00 40.20 3.33
2765 3732 7.414540 GGTTGCCAATTTTATCAACAACAACAA 60.415 33.333 0.00 0.00 40.20 2.83
2766 3733 7.009568 TGCCAATTTTATCAACAACAACAAC 57.990 32.000 0.00 0.00 0.00 3.32
2767 3734 6.595326 TGCCAATTTTATCAACAACAACAACA 59.405 30.769 0.00 0.00 0.00 3.33
2768 3735 7.119699 TGCCAATTTTATCAACAACAACAACAA 59.880 29.630 0.00 0.00 0.00 2.83
2769 3736 7.427895 GCCAATTTTATCAACAACAACAACAAC 59.572 33.333 0.00 0.00 0.00 3.32
2770 3737 8.446273 CCAATTTTATCAACAACAACAACAACA 58.554 29.630 0.00 0.00 0.00 3.33
2771 3738 9.817365 CAATTTTATCAACAACAACAACAACAA 57.183 25.926 0.00 0.00 0.00 2.83
2772 3739 9.818796 AATTTTATCAACAACAACAACAACAAC 57.181 25.926 0.00 0.00 0.00 3.32
2773 3740 7.946655 TTTATCAACAACAACAACAACAACA 57.053 28.000 0.00 0.00 0.00 3.33
2774 3741 7.946655 TTATCAACAACAACAACAACAACAA 57.053 28.000 0.00 0.00 0.00 2.83
2775 3742 6.851222 ATCAACAACAACAACAACAACAAA 57.149 29.167 0.00 0.00 0.00 2.83
2776 3743 6.279227 TCAACAACAACAACAACAACAAAG 57.721 33.333 0.00 0.00 0.00 2.77
2777 3744 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
2778 3745 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
2779 3746 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
2780 3747 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
2781 3748 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
2782 3749 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
2783 3750 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
2784 3751 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2785 3752 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2786 3753 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2787 3754 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2788 3755 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2789 3756 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2790 3757 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2791 3758 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
2792 3759 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
2793 3760 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
2794 3761 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
2795 3762 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
2796 3763 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
2797 3764 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
2806 3773 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2807 3774 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2808 3775 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2809 3776 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2810 3777 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2811 3778 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2812 3779 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2813 3780 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2814 3781 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2815 3782 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2816 3783 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2817 3784 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2832 3799 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
2833 3800 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
2834 3801 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
2835 3802 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
2836 3803 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
2837 3804 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
2838 3805 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
2839 3806 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
2840 3807 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
2841 3808 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
2842 3809 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
2843 3810 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
2851 3818 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
2852 3819 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
2853 3820 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
2854 3821 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
2855 3822 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
2856 3823 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
2857 3824 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
2858 3825 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
2859 3826 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
2860 3827 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
2861 3828 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
2862 3829 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
2863 3830 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
2864 3831 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
2865 3832 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
2866 3833 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
2867 3834 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
2868 3835 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
2869 3836 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
2870 3837 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2871 3838 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2872 3839 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
2873 3840 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
2874 3841 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2875 3842 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2876 3843 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2877 3844 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2878 3845 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2879 3846 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
2880 3847 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
2881 3848 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2882 3849 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2883 3850 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2884 3851 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2886 3853 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2887 3854 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
2888 3855 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
2889 3856 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2890 3857 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
2891 3858 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
2892 3859 0.837272 GCACCCCTGTCCATAGCTAA 59.163 55.000 0.00 0.00 0.00 3.09
2893 3860 1.421646 GCACCCCTGTCCATAGCTAAT 59.578 52.381 0.00 0.00 0.00 1.73
2894 3861 2.637872 GCACCCCTGTCCATAGCTAATA 59.362 50.000 0.00 0.00 0.00 0.98
2895 3862 3.264450 GCACCCCTGTCCATAGCTAATAT 59.736 47.826 0.00 0.00 0.00 1.28
2896 3863 4.469945 GCACCCCTGTCCATAGCTAATATA 59.530 45.833 0.00 0.00 0.00 0.86
2897 3864 5.045869 GCACCCCTGTCCATAGCTAATATAA 60.046 44.000 0.00 0.00 0.00 0.98
2898 3865 6.353082 GCACCCCTGTCCATAGCTAATATAAT 60.353 42.308 0.00 0.00 0.00 1.28
2899 3866 7.275920 CACCCCTGTCCATAGCTAATATAATC 58.724 42.308 0.00 0.00 0.00 1.75
2900 3867 7.126421 CACCCCTGTCCATAGCTAATATAATCT 59.874 40.741 0.00 0.00 0.00 2.40
2901 3868 8.352181 ACCCCTGTCCATAGCTAATATAATCTA 58.648 37.037 0.00 0.00 0.00 1.98
2902 3869 9.386122 CCCCTGTCCATAGCTAATATAATCTAT 57.614 37.037 0.00 0.00 0.00 1.98
2945 3912 9.136323 ACCTTTTGAAAATAGAACATCTGAAGT 57.864 29.630 0.00 0.00 0.00 3.01
2946 3913 9.971922 CCTTTTGAAAATAGAACATCTGAAGTT 57.028 29.630 0.00 0.00 0.00 2.66
2996 3963 9.920946 ATATGACTTGTATTAGGTTGGTCAAAT 57.079 29.630 0.00 0.00 36.16 2.32
2997 3964 8.650143 ATGACTTGTATTAGGTTGGTCAAATT 57.350 30.769 0.00 0.00 36.16 1.82
2998 3965 7.881142 TGACTTGTATTAGGTTGGTCAAATTG 58.119 34.615 0.00 0.00 30.81 2.32
2999 3966 7.721842 TGACTTGTATTAGGTTGGTCAAATTGA 59.278 33.333 0.00 0.00 30.81 2.57
3000 3967 8.110860 ACTTGTATTAGGTTGGTCAAATTGAG 57.889 34.615 0.00 0.00 0.00 3.02
3001 3968 7.942341 ACTTGTATTAGGTTGGTCAAATTGAGA 59.058 33.333 0.00 0.00 0.00 3.27
3002 3969 8.877864 TTGTATTAGGTTGGTCAAATTGAGAT 57.122 30.769 0.00 0.00 0.00 2.75
3003 3970 8.506168 TGTATTAGGTTGGTCAAATTGAGATC 57.494 34.615 0.00 0.00 0.00 2.75
3004 3971 8.328758 TGTATTAGGTTGGTCAAATTGAGATCT 58.671 33.333 0.00 0.00 0.00 2.75
3005 3972 9.832445 GTATTAGGTTGGTCAAATTGAGATCTA 57.168 33.333 0.00 0.00 0.00 1.98
3006 3973 8.970859 ATTAGGTTGGTCAAATTGAGATCTAG 57.029 34.615 0.00 0.00 0.00 2.43
3007 3974 5.749462 AGGTTGGTCAAATTGAGATCTAGG 58.251 41.667 0.00 0.00 0.00 3.02
3008 3975 4.884164 GGTTGGTCAAATTGAGATCTAGGG 59.116 45.833 0.00 0.00 0.00 3.53
3009 3976 4.778213 TGGTCAAATTGAGATCTAGGGG 57.222 45.455 0.00 0.00 0.00 4.79
3010 3977 4.111577 TGGTCAAATTGAGATCTAGGGGT 58.888 43.478 0.00 0.00 0.00 4.95
3011 3978 5.285401 TGGTCAAATTGAGATCTAGGGGTA 58.715 41.667 0.00 0.00 0.00 3.69
3012 3979 5.130477 TGGTCAAATTGAGATCTAGGGGTAC 59.870 44.000 0.00 0.00 0.00 3.34
3013 3980 5.290386 GTCAAATTGAGATCTAGGGGTACG 58.710 45.833 0.00 0.00 0.00 3.67
3014 3981 4.058817 CAAATTGAGATCTAGGGGTACGC 58.941 47.826 0.29 0.29 43.76 4.42
3025 3992 4.675029 GGTACGCGCACACCCTGT 62.675 66.667 12.27 1.77 0.00 4.00
3026 3993 2.259204 GTACGCGCACACCCTGTA 59.741 61.111 5.73 0.00 0.00 2.74
3027 3994 1.373246 GTACGCGCACACCCTGTAA 60.373 57.895 5.73 0.00 0.00 2.41
3028 3995 0.945265 GTACGCGCACACCCTGTAAA 60.945 55.000 5.73 0.00 0.00 2.01
3029 3996 0.945265 TACGCGCACACCCTGTAAAC 60.945 55.000 5.73 0.00 0.00 2.01
3030 3997 1.959226 CGCGCACACCCTGTAAACT 60.959 57.895 8.75 0.00 0.00 2.66
3031 3998 1.574428 GCGCACACCCTGTAAACTG 59.426 57.895 0.30 0.00 0.00 3.16
3032 3999 0.882927 GCGCACACCCTGTAAACTGA 60.883 55.000 0.30 0.00 0.00 3.41
3033 4000 1.148310 CGCACACCCTGTAAACTGAG 58.852 55.000 0.00 0.00 0.00 3.35
3034 4001 1.270094 CGCACACCCTGTAAACTGAGA 60.270 52.381 0.00 0.00 0.00 3.27
3035 4002 2.805295 CGCACACCCTGTAAACTGAGAA 60.805 50.000 0.00 0.00 0.00 2.87
3036 4003 3.211045 GCACACCCTGTAAACTGAGAAA 58.789 45.455 0.00 0.00 0.00 2.52
3037 4004 3.251004 GCACACCCTGTAAACTGAGAAAG 59.749 47.826 0.00 0.00 0.00 2.62
3038 4005 4.703897 CACACCCTGTAAACTGAGAAAGA 58.296 43.478 0.00 0.00 0.00 2.52
3039 4006 4.752101 CACACCCTGTAAACTGAGAAAGAG 59.248 45.833 0.00 0.00 0.00 2.85
3040 4007 4.202367 ACACCCTGTAAACTGAGAAAGAGG 60.202 45.833 0.00 0.00 0.00 3.69
3041 4008 3.328050 ACCCTGTAAACTGAGAAAGAGGG 59.672 47.826 11.86 11.86 39.81 4.30
3042 4009 3.583086 CCCTGTAAACTGAGAAAGAGGGA 59.417 47.826 9.05 0.00 37.27 4.20
3043 4010 4.323104 CCCTGTAAACTGAGAAAGAGGGAG 60.323 50.000 9.05 0.00 37.27 4.30
3131 4181 2.276201 GCCATGCATGACACGTAGTAA 58.724 47.619 28.31 0.00 41.61 2.24
3188 4238 6.553857 TGTTACTCTAACCCTCTCTCTCTTT 58.446 40.000 0.00 0.00 37.88 2.52
3189 4239 6.660094 TGTTACTCTAACCCTCTCTCTCTTTC 59.340 42.308 0.00 0.00 37.88 2.62
3198 4248 7.323052 ACCCTCTCTCTCTTTCTTAATTGTT 57.677 36.000 0.00 0.00 0.00 2.83
3208 4258 6.148948 TCTTTCTTAATTGTTTGCCACATCG 58.851 36.000 0.00 0.00 34.43 3.84
3417 4471 7.454225 GGAGTAGCTTAATTGAGGAACCATAT 58.546 38.462 0.00 0.00 0.00 1.78
3449 4503 3.443681 GTGTGCCAACTGCCTATAAATGT 59.556 43.478 0.00 0.00 40.16 2.71
3559 4613 7.393216 TGGAACTAAATTCAAATGGATTTGGG 58.607 34.615 13.18 7.54 45.39 4.12
3569 4623 0.039618 TGGATTTGGGGGTCTGCTTC 59.960 55.000 0.00 0.00 0.00 3.86
3667 4733 1.419381 TCGCTATGGGTATGCTCCAA 58.581 50.000 0.00 0.00 37.87 3.53
3742 4808 9.970395 CTTGATGAATAAATTGGCAGCTTAATA 57.030 29.630 0.00 0.00 0.00 0.98
3773 4840 2.871096 TATGGGTTCGGAGCAAGTTT 57.129 45.000 0.00 0.00 0.00 2.66
3957 5024 6.627243 ACTATTTCATAGTGTGCGTAACTGA 58.373 36.000 0.00 0.00 44.07 3.41
3984 5059 7.693969 ATAAATGAAGACCTCAAGTTTCCAG 57.306 36.000 0.00 0.00 37.67 3.86
4094 5169 8.978539 CGTTGCTAAGATGCTAAGTGATTATTA 58.021 33.333 0.00 0.00 0.00 0.98
4128 5203 9.729550 TGCTATGGATATACATAAATACTCCCT 57.270 33.333 8.99 0.00 33.27 4.20
4131 5206 7.655521 TGGATATACATAAATACTCCCTCCG 57.344 40.000 0.00 0.00 0.00 4.63
4132 5207 7.186972 TGGATATACATAAATACTCCCTCCGT 58.813 38.462 0.00 0.00 0.00 4.69
4133 5208 7.341256 TGGATATACATAAATACTCCCTCCGTC 59.659 40.741 0.00 0.00 0.00 4.79
4134 5209 5.997384 ATACATAAATACTCCCTCCGTCC 57.003 43.478 0.00 0.00 0.00 4.79
4135 5210 2.970640 ACATAAATACTCCCTCCGTCCC 59.029 50.000 0.00 0.00 0.00 4.46
4136 5211 2.852714 TAAATACTCCCTCCGTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
4137 5212 2.191981 AAATACTCCCTCCGTCCCAT 57.808 50.000 0.00 0.00 0.00 4.00
4138 5213 3.339713 AAATACTCCCTCCGTCCCATA 57.660 47.619 0.00 0.00 0.00 2.74
4139 5214 3.339713 AATACTCCCTCCGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
4140 5215 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
4141 5216 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
4142 5217 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
4143 5218 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
4144 5219 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
4145 5220 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
4146 5221 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
4147 5222 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
4149 5224 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
4150 5225 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
4151 5226 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
4152 5227 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
4153 5228 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
4190 5265 8.767478 AAAACGTATTATATTATGGGACGGAG 57.233 34.615 0.00 0.00 33.32 4.63
4191 5266 6.461110 ACGTATTATATTATGGGACGGAGG 57.539 41.667 0.00 0.00 33.32 4.30
4192 5267 5.361857 ACGTATTATATTATGGGACGGAGGG 59.638 44.000 0.00 0.00 33.32 4.30
4193 5268 5.595542 CGTATTATATTATGGGACGGAGGGA 59.404 44.000 0.00 0.00 0.00 4.20
4246 5322 3.505464 AAACGTCTCTAAGCGCTACAT 57.495 42.857 12.05 0.00 0.00 2.29
4364 5440 1.048160 TGGCATAGCGGAGTGATGGA 61.048 55.000 0.00 0.00 0.00 3.41
4432 5508 9.587772 TCTTAAATTAGAATTCTCTTGGACTCG 57.412 33.333 12.24 0.00 32.70 4.18
4655 5733 1.063717 AGCCTGTGTTATGGGGAATGG 60.064 52.381 0.00 0.00 0.00 3.16
4661 5739 5.222109 CCTGTGTTATGGGGAATGGATGATA 60.222 44.000 0.00 0.00 0.00 2.15
4713 5851 8.763049 TGTTCTACATCTGTTAGTCATTTCTG 57.237 34.615 0.00 0.00 0.00 3.02
4787 5927 5.375417 CACTGATTTGGTTGTGCAAGATA 57.625 39.130 0.00 0.00 0.00 1.98
4872 6013 4.803098 TCCTAGCTTTCTGAGGTGTAAC 57.197 45.455 0.00 0.00 37.30 2.50
4964 6112 9.342308 CAACCATATAAGTGTGAATTCTGGTAT 57.658 33.333 7.05 0.99 33.53 2.73
5016 6164 2.289945 GGAAAGTGATGCTCAGGTGAGT 60.290 50.000 8.74 0.00 43.85 3.41
5078 6229 6.711277 TCAAAGTATGACTAGAATGGCACTT 58.289 36.000 0.00 0.00 31.50 3.16
5097 6248 7.093068 TGGCACTTCTAACTCAGGTTGATAATA 60.093 37.037 0.00 0.00 36.92 0.98
5099 6250 7.224949 GCACTTCTAACTCAGGTTGATAATACC 59.775 40.741 0.00 0.00 36.92 2.73
5132 6283 8.553696 GTGAAATTGAAATCTGAAGCAAACAAT 58.446 29.630 0.00 0.00 0.00 2.71
5259 6411 8.745590 TCTGGTTACTCTTTTTAATTATTGGCC 58.254 33.333 0.00 0.00 0.00 5.36
5288 6440 5.132648 TCTGCACCTAAAATCCTATGGACAT 59.867 40.000 0.00 0.00 32.98 3.06
5289 6441 5.132502 TGCACCTAAAATCCTATGGACATG 58.867 41.667 0.00 0.00 32.98 3.21
5339 6491 4.861102 AGCAAAAGGGAGACTGAAATTG 57.139 40.909 0.00 0.00 0.00 2.32
5367 6519 4.394920 TGTTGAGAAATTACCGGAGATTGC 59.605 41.667 9.46 6.43 0.00 3.56
5602 6754 1.738030 GCTCCAAGTGGAAATGCATGC 60.738 52.381 11.82 11.82 44.91 4.06
5616 6768 1.746615 CATGCGGCACCAGTAAGCT 60.747 57.895 4.03 0.00 0.00 3.74
5646 6798 5.357878 TGTTTTCAGCTGAGAAGAATGTGTT 59.642 36.000 19.24 0.00 0.00 3.32
5707 6859 2.236146 TGGACAGATAATGGACAACGCT 59.764 45.455 0.00 0.00 0.00 5.07
5761 6913 4.384537 CCAAGTGATCCTGGCAAAGATCTA 60.385 45.833 21.28 10.16 39.72 1.98
5891 7043 3.550431 CGATCGGCCATCCCCAGT 61.550 66.667 7.38 0.00 0.00 4.00
6150 7302 3.643199 TTGCTTGCACATATACCCTGA 57.357 42.857 0.00 0.00 0.00 3.86
6155 7307 2.917933 TGCACATATACCCTGAGCAAC 58.082 47.619 0.00 0.00 37.29 4.17
6156 7308 2.238395 TGCACATATACCCTGAGCAACA 59.762 45.455 0.00 0.00 37.29 3.33
6160 7312 3.118261 ACATATACCCTGAGCAACACTGG 60.118 47.826 0.00 0.00 0.00 4.00
6165 7317 1.072331 CCCTGAGCAACACTGGTTAGT 59.928 52.381 0.00 0.00 35.47 2.24
6256 7410 2.022718 AGCAACTGTCTCTTCCCTCT 57.977 50.000 0.00 0.00 0.00 3.69
6269 7423 3.833070 TCTTCCCTCTGTCCACTTAACTC 59.167 47.826 0.00 0.00 0.00 3.01
6301 7455 9.552114 GAATCTGTTTATGACAAGAATGTTCAG 57.448 33.333 0.00 0.00 40.74 3.02
6310 7464 5.304357 TGACAAGAATGTTCAGTCTAGTGGA 59.696 40.000 14.86 0.00 40.74 4.02
6311 7465 6.174720 ACAAGAATGTTCAGTCTAGTGGAA 57.825 37.500 3.28 0.00 35.91 3.53
6332 7486 1.955778 CTTTGCCCTCACATGAACACA 59.044 47.619 0.00 0.00 0.00 3.72
6497 7651 4.510340 CGTATGGCTTTATACCTGTTCCAC 59.490 45.833 0.00 0.00 31.33 4.02
6544 7698 6.373117 GTACCAGTACAGTGCAATTATGCCA 61.373 44.000 3.07 0.00 42.44 4.92
6780 7934 0.375106 GCAGAGCGCAATAACCAGAC 59.625 55.000 11.47 0.00 41.79 3.51
6845 7999 5.163602 GGTGAAACTGATACAAACACCAACA 60.164 40.000 0.00 0.00 43.59 3.33
6892 8046 2.613977 CGAGAGTGGCATCCAGAACTTT 60.614 50.000 0.00 0.00 32.34 2.66
6901 8055 4.546570 GCATCCAGAACTTTGGTTACAAC 58.453 43.478 0.00 0.00 39.35 3.32
7015 8169 8.974060 TCTGTTTGACAAACCTAAATAGTCTT 57.026 30.769 24.58 0.00 40.67 3.01
7210 8364 4.137116 ACTCAAGTCAGCTACAACAACA 57.863 40.909 0.00 0.00 0.00 3.33
7261 8422 7.936847 TGTCCATGACTGTACTTTTGATACTTT 59.063 33.333 0.00 0.00 33.15 2.66
7370 8531 1.758280 ACAAGTGTTCCGTGTACTCCA 59.242 47.619 0.00 0.00 33.77 3.86
7406 8567 4.582701 TTGACATGGTTTGCCTGTAAAG 57.417 40.909 0.00 0.00 35.27 1.85
7407 8568 3.826524 TGACATGGTTTGCCTGTAAAGA 58.173 40.909 0.00 0.00 35.27 2.52
7517 11597 9.947433 TCCTTACAGTAGCTCTAGATTATACTC 57.053 37.037 0.00 0.00 0.00 2.59
7518 11598 9.169592 CCTTACAGTAGCTCTAGATTATACTCC 57.830 40.741 0.00 0.00 0.00 3.85
7519 11599 9.169592 CTTACAGTAGCTCTAGATTATACTCCC 57.830 40.741 0.00 0.00 0.00 4.30
7520 11600 7.337826 ACAGTAGCTCTAGATTATACTCCCT 57.662 40.000 0.00 0.00 0.00 4.20
7521 11601 7.399634 ACAGTAGCTCTAGATTATACTCCCTC 58.600 42.308 0.00 0.00 0.00 4.30
7522 11602 6.826741 CAGTAGCTCTAGATTATACTCCCTCC 59.173 46.154 0.00 0.00 0.00 4.30
7523 11603 4.850680 AGCTCTAGATTATACTCCCTCCG 58.149 47.826 0.00 0.00 0.00 4.63
7524 11604 4.290196 AGCTCTAGATTATACTCCCTCCGT 59.710 45.833 0.00 0.00 0.00 4.69
7525 11605 4.637091 GCTCTAGATTATACTCCCTCCGTC 59.363 50.000 0.00 0.00 0.00 4.79
7526 11606 5.176741 TCTAGATTATACTCCCTCCGTCC 57.823 47.826 0.00 0.00 0.00 4.79
7527 11607 2.792878 AGATTATACTCCCTCCGTCCG 58.207 52.381 0.00 0.00 0.00 4.79
7528 11608 2.374504 AGATTATACTCCCTCCGTCCGA 59.625 50.000 0.00 0.00 0.00 4.55
7529 11609 2.734755 TTATACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
7530 11610 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
7531 11611 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
7532 11612 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
7533 11613 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
7534 11614 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
7535 11615 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
7536 11616 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
7537 11617 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
7538 11618 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
7539 11619 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
7540 11620 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
7541 11621 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
7542 11622 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
7543 11623 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
7544 11624 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
7545 11625 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
7546 11626 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
7547 11627 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
7548 11628 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
7549 11629 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
7550 11630 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
7551 11631 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
7552 11632 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
7553 11633 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
7554 11634 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
7555 11635 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
7556 11636 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
7599 11679 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
7607 11687 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
7613 11693 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
7616 11696 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
7617 11697 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
7618 11698 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
7619 11699 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
7620 11700 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
7621 11701 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
7628 11708 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
7629 11709 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
7630 11710 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
7631 11711 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
7632 11712 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
7633 11713 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
7634 11714 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
7635 11715 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
7636 11716 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
7637 11717 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
7638 11718 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
7639 11719 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
7640 11720 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
7641 11721 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
7753 11833 3.259123 AGGACATCCTGCCAACATTTTTC 59.741 43.478 0.00 0.00 46.55 2.29
7808 11888 3.532641 ATCCTTTTCCCAGTTCTTGCT 57.467 42.857 0.00 0.00 0.00 3.91
7845 11925 2.281484 TGGAACTGCTGCGGAACC 60.281 61.111 16.72 16.81 0.00 3.62
7997 14384 7.871853 TGGCACTCTTATCTTACAAAAGTTTC 58.128 34.615 0.00 0.00 34.13 2.78
7999 14386 7.175119 GGCACTCTTATCTTACAAAAGTTTCCT 59.825 37.037 0.00 0.00 34.13 3.36
8045 14432 8.758829 AGACAAGGTATCAGTCACAAACATATA 58.241 33.333 0.00 0.00 34.80 0.86
8076 14463 2.860735 CCGATTTCTTGAGACGGATCAC 59.139 50.000 0.00 0.00 45.31 3.06
8199 14586 5.393461 GCACTGCACTTCTTGGCTTATAAAT 60.393 40.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.473504 ACTTACCACAATTAAACCAGCTCTG 59.526 40.000 0.00 0.00 0.00 3.35
127 128 1.260538 ATTGTGCGGCTCCTCTCTCA 61.261 55.000 0.00 0.00 0.00 3.27
129 130 1.195115 TAATTGTGCGGCTCCTCTCT 58.805 50.000 0.00 0.00 0.00 3.10
131 132 1.555075 TCTTAATTGTGCGGCTCCTCT 59.445 47.619 0.00 0.00 0.00 3.69
176 183 6.463995 TGTGGGATGGAAGTTATTTTATGC 57.536 37.500 0.00 0.00 0.00 3.14
193 200 2.617788 CCCAAGTTCGAATCATGTGGGA 60.618 50.000 21.02 0.00 46.01 4.37
216 223 2.780094 CGGTTGTGCACCTTGGCAA 61.780 57.895 15.69 0.00 46.93 4.52
237 244 4.565652 GGCATCTACCTCAGTGGAAAAGAA 60.566 45.833 0.00 0.00 37.01 2.52
242 249 1.204146 GGGCATCTACCTCAGTGGAA 58.796 55.000 0.00 0.00 37.01 3.53
243 250 0.042581 TGGGCATCTACCTCAGTGGA 59.957 55.000 0.00 0.00 37.94 4.02
245 252 1.071385 GGATGGGCATCTACCTCAGTG 59.929 57.143 0.00 0.00 37.92 3.66
246 253 1.344393 TGGATGGGCATCTACCTCAGT 60.344 52.381 0.00 0.00 37.92 3.41
247 254 1.071385 GTGGATGGGCATCTACCTCAG 59.929 57.143 0.00 0.00 41.63 3.35
248 255 1.131638 GTGGATGGGCATCTACCTCA 58.868 55.000 0.00 0.00 41.63 3.86
249 256 1.131638 TGTGGATGGGCATCTACCTC 58.868 55.000 0.00 0.00 45.27 3.85
251 258 0.179018 GGTGTGGATGGGCATCTACC 60.179 60.000 0.00 0.00 45.27 3.18
252 259 0.532862 CGGTGTGGATGGGCATCTAC 60.533 60.000 0.00 0.00 45.83 2.59
300 307 2.326222 AAAAACTCATCACGCCGCA 58.674 47.368 0.00 0.00 0.00 5.69
320 327 0.386476 TACACGACTCCACACCACAC 59.614 55.000 0.00 0.00 0.00 3.82
334 341 2.857748 TGCACGATGAATTAGCTACACG 59.142 45.455 0.00 0.00 0.00 4.49
372 379 4.963373 TGAATTCCCTTTACGTCAACTGA 58.037 39.130 2.27 0.00 0.00 3.41
374 381 6.542370 CCATATGAATTCCCTTTACGTCAACT 59.458 38.462 3.65 0.00 0.00 3.16
376 383 6.654959 TCCATATGAATTCCCTTTACGTCAA 58.345 36.000 3.65 0.00 0.00 3.18
378 385 6.289064 ACTCCATATGAATTCCCTTTACGTC 58.711 40.000 3.65 0.00 0.00 4.34
379 386 6.248569 ACTCCATATGAATTCCCTTTACGT 57.751 37.500 3.65 0.00 0.00 3.57
380 387 6.017109 CCAACTCCATATGAATTCCCTTTACG 60.017 42.308 3.65 0.00 0.00 3.18
381 388 7.060421 TCCAACTCCATATGAATTCCCTTTAC 58.940 38.462 3.65 0.00 0.00 2.01
382 389 7.219601 TCCAACTCCATATGAATTCCCTTTA 57.780 36.000 3.65 0.00 0.00 1.85
383 390 6.091076 TCCAACTCCATATGAATTCCCTTT 57.909 37.500 3.65 0.00 0.00 3.11
386 393 5.474876 GTGATCCAACTCCATATGAATTCCC 59.525 44.000 3.65 0.00 0.00 3.97
442 524 8.247562 CCGGTTTCCAATATTTCAGTTTTCATA 58.752 33.333 0.00 0.00 0.00 2.15
467 549 7.068716 AGCAACCACATTATCCTCTTTAATTCC 59.931 37.037 0.00 0.00 0.00 3.01
496 578 8.950403 ACGTAAATAAAGTTGAGCTGAAATTC 57.050 30.769 0.00 0.00 0.00 2.17
583 667 2.616960 TCCATACATGACAGACGTTGC 58.383 47.619 0.00 0.00 0.00 4.17
584 668 3.557185 CCATCCATACATGACAGACGTTG 59.443 47.826 0.00 0.00 0.00 4.10
585 669 3.450817 TCCATCCATACATGACAGACGTT 59.549 43.478 0.00 0.00 0.00 3.99
586 670 3.031013 TCCATCCATACATGACAGACGT 58.969 45.455 0.00 0.00 0.00 4.34
757 850 1.977009 GGCCTCTCGTTTTTGGGGG 60.977 63.158 0.00 0.00 0.00 5.40
758 851 1.228429 TGGCCTCTCGTTTTTGGGG 60.228 57.895 3.32 0.00 0.00 4.96
759 852 1.524008 GGTGGCCTCTCGTTTTTGGG 61.524 60.000 3.32 0.00 0.00 4.12
760 853 0.821711 TGGTGGCCTCTCGTTTTTGG 60.822 55.000 3.32 0.00 0.00 3.28
784 877 1.099689 CACGGGGATATTTTTGCCGT 58.900 50.000 0.00 0.00 0.00 5.68
815 908 2.000429 ATTTCTGCTGCGATTTTGGC 58.000 45.000 0.00 0.00 0.00 4.52
827 922 3.179048 GTTTTGGGCGTGATATTTCTGC 58.821 45.455 0.00 0.00 0.00 4.26
883 978 2.028020 TGTTTTCGGTTGGGTGCTTTTT 60.028 40.909 0.00 0.00 0.00 1.94
918 1015 5.041191 TGGCAGATATTTTTCTCCTCCTC 57.959 43.478 0.00 0.00 0.00 3.71
921 1018 3.249559 CGCTGGCAGATATTTTTCTCCTC 59.750 47.826 20.86 0.00 0.00 3.71
922 1019 3.209410 CGCTGGCAGATATTTTTCTCCT 58.791 45.455 20.86 0.00 0.00 3.69
924 1021 2.615912 AGCGCTGGCAGATATTTTTCTC 59.384 45.455 20.86 0.00 43.41 2.87
925 1022 2.615912 GAGCGCTGGCAGATATTTTTCT 59.384 45.455 18.48 2.01 43.41 2.52
1043 1150 1.869452 AGAGGGGGAGAGGGGAACT 60.869 63.158 0.00 0.00 0.00 3.01
1055 1162 2.123640 GTCGGGAGAGGAGAGGGG 60.124 72.222 0.00 0.00 41.26 4.79
1284 1621 3.131400 CGGCTAAGCTAGAAGAAGGAAGT 59.869 47.826 0.00 0.00 0.00 3.01
1338 1676 2.338015 ACAGCCCAATTCAGCAGCG 61.338 57.895 0.00 0.00 0.00 5.18
1410 1750 3.727258 CCCCGCATGACCTCCCAA 61.727 66.667 0.00 0.00 0.00 4.12
1704 2045 2.584791 CACGCACAAAAATCAGCCTAC 58.415 47.619 0.00 0.00 0.00 3.18
1712 2053 1.892474 ACCATAGGCACGCACAAAAAT 59.108 42.857 0.00 0.00 0.00 1.82
1721 2062 0.249489 GGAGCAGTACCATAGGCACG 60.249 60.000 0.00 0.00 0.00 5.34
1725 2066 2.088104 TCCAGGAGCAGTACCATAGG 57.912 55.000 0.00 0.00 0.00 2.57
1756 2100 9.968033 AGCAGATCGCCAAATCCATTTGAATTC 62.968 40.741 12.72 0.00 45.10 2.17
1790 2134 2.294132 GACTAGTGGTAGCCGGCACC 62.294 65.000 31.54 30.57 36.54 5.01
1803 2147 2.817258 GCAGAGACAGACACTGACTAGT 59.183 50.000 0.00 0.00 36.72 2.57
1840 2184 1.387756 CCGACAACGACAACGGTAATC 59.612 52.381 0.00 0.00 44.46 1.75
1920 2270 3.704566 AGATACCGCACAGGACAAATCTA 59.295 43.478 0.00 0.00 45.00 1.98
1930 2280 3.443099 TCATCAAGAGATACCGCACAG 57.557 47.619 0.00 0.00 31.88 3.66
2092 2443 8.400186 CCATTTTACCTATTAAAAGTGTACCCG 58.600 37.037 0.00 0.00 41.86 5.28
2151 2502 7.696992 AAAACCACGACACTTATTATGGATT 57.303 32.000 0.00 0.00 0.00 3.01
2211 3161 0.824182 AAGCTACTCCCTCCGATCCG 60.824 60.000 0.00 0.00 0.00 4.18
2287 3237 9.316730 CAACCACAATTAAGCAATTAGCATAAT 57.683 29.630 3.32 4.38 45.97 1.28
2377 3327 4.614535 GCAGATCGCCAAATCCATATGAAC 60.615 45.833 3.65 0.00 32.94 3.18
2428 3378 3.244735 ACTGAGAGCAGAGACAGACACTA 60.245 47.826 0.00 0.00 45.17 2.74
2480 3430 3.317149 CCCATAACGATACTCGAGGTGAA 59.683 47.826 18.41 0.00 43.74 3.18
2482 3432 2.621998 ACCCATAACGATACTCGAGGTG 59.378 50.000 18.41 5.67 43.74 4.00
2483 3433 2.941480 ACCCATAACGATACTCGAGGT 58.059 47.619 18.41 4.66 43.74 3.85
2496 3447 3.620427 ACACGTGAAGCATACCCATAA 57.380 42.857 25.01 0.00 0.00 1.90
2697 3664 3.896888 TGTAAACTGAAACGGAGGGAGTA 59.103 43.478 0.00 0.00 0.00 2.59
2698 3665 2.701951 TGTAAACTGAAACGGAGGGAGT 59.298 45.455 0.00 0.00 0.00 3.85
2699 3666 3.396260 TGTAAACTGAAACGGAGGGAG 57.604 47.619 0.00 0.00 0.00 4.30
2700 3667 3.135167 ACTTGTAAACTGAAACGGAGGGA 59.865 43.478 0.00 0.00 0.00 4.20
2701 3668 3.473625 ACTTGTAAACTGAAACGGAGGG 58.526 45.455 0.00 0.00 0.00 4.30
2702 3669 3.497262 GGACTTGTAAACTGAAACGGAGG 59.503 47.826 0.00 0.00 0.00 4.30
2703 3670 4.211374 CAGGACTTGTAAACTGAAACGGAG 59.789 45.833 0.00 0.00 32.86 4.63
2704 3671 4.124238 CAGGACTTGTAAACTGAAACGGA 58.876 43.478 0.00 0.00 32.86 4.69
2705 3672 3.303791 GCAGGACTTGTAAACTGAAACGG 60.304 47.826 0.00 0.00 32.86 4.44
2706 3673 3.603857 CGCAGGACTTGTAAACTGAAACG 60.604 47.826 0.00 0.00 32.86 3.60
2707 3674 3.848554 GCGCAGGACTTGTAAACTGAAAC 60.849 47.826 0.30 0.00 32.86 2.78
2708 3675 2.289547 GCGCAGGACTTGTAAACTGAAA 59.710 45.455 0.30 0.00 32.86 2.69
2709 3676 1.871039 GCGCAGGACTTGTAAACTGAA 59.129 47.619 0.30 0.00 32.86 3.02
2710 3677 1.508632 GCGCAGGACTTGTAAACTGA 58.491 50.000 0.30 0.00 32.86 3.41
2711 3678 0.163788 CGCGCAGGACTTGTAAACTG 59.836 55.000 8.75 0.00 0.00 3.16
2712 3679 0.249741 ACGCGCAGGACTTGTAAACT 60.250 50.000 5.73 0.00 0.00 2.66
2713 3680 1.421382 TACGCGCAGGACTTGTAAAC 58.579 50.000 5.73 0.00 0.00 2.01
2714 3681 2.373540 ATACGCGCAGGACTTGTAAA 57.626 45.000 5.73 0.00 0.00 2.01
2715 3682 2.480073 GGTATACGCGCAGGACTTGTAA 60.480 50.000 5.73 0.00 0.00 2.41
2716 3683 1.066002 GGTATACGCGCAGGACTTGTA 59.934 52.381 5.73 0.00 0.00 2.41
2717 3684 0.179119 GGTATACGCGCAGGACTTGT 60.179 55.000 5.73 0.00 0.00 3.16
2718 3685 0.102481 AGGTATACGCGCAGGACTTG 59.898 55.000 5.73 0.00 0.00 3.16
2719 3686 1.607628 CTAGGTATACGCGCAGGACTT 59.392 52.381 5.73 0.00 0.00 3.01
2720 3687 1.236628 CTAGGTATACGCGCAGGACT 58.763 55.000 5.73 1.68 0.00 3.85
2721 3688 0.240411 CCTAGGTATACGCGCAGGAC 59.760 60.000 5.73 0.00 0.00 3.85
2722 3689 0.179009 ACCTAGGTATACGCGCAGGA 60.179 55.000 14.41 0.00 0.00 3.86
2723 3690 0.672342 AACCTAGGTATACGCGCAGG 59.328 55.000 16.67 6.39 0.00 4.85
2724 3691 1.767289 CAACCTAGGTATACGCGCAG 58.233 55.000 16.67 2.42 0.00 5.18
2725 3692 0.249155 GCAACCTAGGTATACGCGCA 60.249 55.000 16.67 0.00 0.00 6.09
2726 3693 0.942884 GGCAACCTAGGTATACGCGC 60.943 60.000 16.67 10.85 0.00 6.86
2727 3694 0.386476 TGGCAACCTAGGTATACGCG 59.614 55.000 16.67 3.53 0.00 6.01
2728 3695 2.607631 TTGGCAACCTAGGTATACGC 57.392 50.000 16.67 15.11 0.00 4.42
2729 3696 7.442969 TGATAAAATTGGCAACCTAGGTATACG 59.557 37.037 16.67 5.52 0.00 3.06
2730 3697 8.685838 TGATAAAATTGGCAACCTAGGTATAC 57.314 34.615 16.67 8.74 0.00 1.47
2731 3698 9.127277 GTTGATAAAATTGGCAACCTAGGTATA 57.873 33.333 16.67 0.00 35.74 1.47
2732 3699 7.617723 TGTTGATAAAATTGGCAACCTAGGTAT 59.382 33.333 16.67 0.83 39.75 2.73
2733 3700 6.948886 TGTTGATAAAATTGGCAACCTAGGTA 59.051 34.615 16.67 0.00 39.75 3.08
2734 3701 5.777732 TGTTGATAAAATTGGCAACCTAGGT 59.222 36.000 9.21 9.21 39.75 3.08
2735 3702 6.279513 TGTTGATAAAATTGGCAACCTAGG 57.720 37.500 7.41 7.41 39.75 3.02
2736 3703 7.151308 TGTTGTTGATAAAATTGGCAACCTAG 58.849 34.615 0.00 0.00 39.75 3.02
2737 3704 7.055667 TGTTGTTGATAAAATTGGCAACCTA 57.944 32.000 0.00 0.00 39.75 3.08
2738 3705 5.923204 TGTTGTTGATAAAATTGGCAACCT 58.077 33.333 0.00 0.00 39.75 3.50
2739 3706 6.037610 TGTTGTTGTTGATAAAATTGGCAACC 59.962 34.615 0.00 0.00 39.75 3.77
2740 3707 7.009568 TGTTGTTGTTGATAAAATTGGCAAC 57.990 32.000 0.00 0.00 40.62 4.17
2741 3708 7.119699 TGTTGTTGTTGTTGATAAAATTGGCAA 59.880 29.630 0.68 0.68 0.00 4.52
2742 3709 6.595326 TGTTGTTGTTGTTGATAAAATTGGCA 59.405 30.769 0.00 0.00 0.00 4.92
2743 3710 7.009568 TGTTGTTGTTGTTGATAAAATTGGC 57.990 32.000 0.00 0.00 0.00 4.52
2744 3711 8.446273 TGTTGTTGTTGTTGTTGATAAAATTGG 58.554 29.630 0.00 0.00 0.00 3.16
2745 3712 9.817365 TTGTTGTTGTTGTTGTTGATAAAATTG 57.183 25.926 0.00 0.00 0.00 2.32
2746 3713 9.818796 GTTGTTGTTGTTGTTGTTGATAAAATT 57.181 25.926 0.00 0.00 0.00 1.82
2747 3714 8.993121 TGTTGTTGTTGTTGTTGTTGATAAAAT 58.007 25.926 0.00 0.00 0.00 1.82
2748 3715 8.365399 TGTTGTTGTTGTTGTTGTTGATAAAA 57.635 26.923 0.00 0.00 0.00 1.52
2749 3716 7.946655 TGTTGTTGTTGTTGTTGTTGATAAA 57.053 28.000 0.00 0.00 0.00 1.40
2750 3717 7.946655 TTGTTGTTGTTGTTGTTGTTGATAA 57.053 28.000 0.00 0.00 0.00 1.75
2751 3718 7.359598 GCTTTGTTGTTGTTGTTGTTGTTGATA 60.360 33.333 0.00 0.00 0.00 2.15
2752 3719 6.565623 GCTTTGTTGTTGTTGTTGTTGTTGAT 60.566 34.615 0.00 0.00 0.00 2.57
2753 3720 5.277058 GCTTTGTTGTTGTTGTTGTTGTTGA 60.277 36.000 0.00 0.00 0.00 3.18
2754 3721 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
2755 3722 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
2756 3723 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
2757 3724 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
2758 3725 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
2759 3726 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
2760 3727 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2761 3728 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2762 3729 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2763 3730 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2764 3731 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2765 3732 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2766 3733 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2767 3734 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2768 3735 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2769 3736 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
2770 3737 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
2771 3738 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
2772 3739 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
2773 3740 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
2774 3741 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
2775 3742 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
2776 3743 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2787 3754 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2788 3755 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2789 3756 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2790 3757 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2791 3758 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2792 3759 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2793 3760 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2794 3761 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2795 3762 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2796 3763 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2797 3764 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2798 3765 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2799 3766 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2800 3767 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2801 3768 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2802 3769 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2803 3770 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2804 3771 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2805 3772 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2806 3773 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2807 3774 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2808 3775 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
2809 3776 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
2810 3777 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
2811 3778 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
2812 3779 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
2813 3780 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
2814 3781 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
2815 3782 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
2816 3783 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
2817 3784 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
2818 3785 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
2819 3786 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
2820 3787 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
2821 3788 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
2822 3789 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
2823 3790 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
2824 3791 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
2825 3792 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
2826 3793 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
2835 3802 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
2836 3803 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
2837 3804 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
2838 3805 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
2839 3806 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
2840 3807 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
2841 3808 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
2842 3809 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
2843 3810 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
2844 3811 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
2845 3812 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
2846 3813 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
2847 3814 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
2848 3815 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
2849 3816 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2850 3817 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2851 3818 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
2852 3819 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
2853 3820 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2854 3821 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
2855 3822 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
2856 3823 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2857 3824 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2858 3825 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
2859 3826 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2860 3827 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2861 3828 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2862 3829 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2863 3830 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2864 3831 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2865 3832 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2866 3833 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2867 3834 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
2869 3836 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
2870 3837 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
2871 3838 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
2872 3839 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
2873 3840 0.837272 TTAGCTATGGACAGGGGTGC 59.163 55.000 0.00 0.00 35.66 5.01
2874 3841 6.620877 TTATATTAGCTATGGACAGGGGTG 57.379 41.667 0.00 0.00 0.00 4.61
2875 3842 7.199765 AGATTATATTAGCTATGGACAGGGGT 58.800 38.462 0.00 0.00 0.00 4.95
2876 3843 7.682787 AGATTATATTAGCTATGGACAGGGG 57.317 40.000 0.00 0.00 0.00 4.79
2919 3886 9.136323 ACTTCAGATGTTCTATTTTCAAAAGGT 57.864 29.630 0.00 0.00 0.00 3.50
2920 3887 9.971922 AACTTCAGATGTTCTATTTTCAAAAGG 57.028 29.630 0.00 0.00 0.00 3.11
2970 3937 9.920946 ATTTGACCAACCTAATACAAGTCATAT 57.079 29.630 0.00 0.00 33.21 1.78
2971 3938 9.747898 AATTTGACCAACCTAATACAAGTCATA 57.252 29.630 0.00 0.00 33.21 2.15
2972 3939 8.522830 CAATTTGACCAACCTAATACAAGTCAT 58.477 33.333 0.00 0.00 33.21 3.06
2973 3940 7.721842 TCAATTTGACCAACCTAATACAAGTCA 59.278 33.333 0.00 0.00 0.00 3.41
2974 3941 8.106247 TCAATTTGACCAACCTAATACAAGTC 57.894 34.615 0.00 0.00 0.00 3.01
2975 3942 7.942341 TCTCAATTTGACCAACCTAATACAAGT 59.058 33.333 0.00 0.00 0.00 3.16
2976 3943 8.335532 TCTCAATTTGACCAACCTAATACAAG 57.664 34.615 0.00 0.00 0.00 3.16
2977 3944 8.877864 ATCTCAATTTGACCAACCTAATACAA 57.122 30.769 0.00 0.00 0.00 2.41
2978 3945 8.328758 AGATCTCAATTTGACCAACCTAATACA 58.671 33.333 0.00 0.00 0.00 2.29
2979 3946 8.738645 AGATCTCAATTTGACCAACCTAATAC 57.261 34.615 0.00 0.00 0.00 1.89
2981 3948 7.995488 CCTAGATCTCAATTTGACCAACCTAAT 59.005 37.037 0.00 0.00 0.00 1.73
2982 3949 7.338710 CCTAGATCTCAATTTGACCAACCTAA 58.661 38.462 0.00 0.00 0.00 2.69
2983 3950 6.126768 CCCTAGATCTCAATTTGACCAACCTA 60.127 42.308 0.00 0.00 0.00 3.08
2984 3951 5.339530 CCCTAGATCTCAATTTGACCAACCT 60.340 44.000 0.00 0.00 0.00 3.50
2985 3952 4.884164 CCCTAGATCTCAATTTGACCAACC 59.116 45.833 0.00 0.00 0.00 3.77
2986 3953 4.884164 CCCCTAGATCTCAATTTGACCAAC 59.116 45.833 0.00 0.00 0.00 3.77
2987 3954 4.540099 ACCCCTAGATCTCAATTTGACCAA 59.460 41.667 0.00 0.00 0.00 3.67
2988 3955 4.111577 ACCCCTAGATCTCAATTTGACCA 58.888 43.478 0.00 0.00 0.00 4.02
2989 3956 4.779993 ACCCCTAGATCTCAATTTGACC 57.220 45.455 0.00 0.00 0.00 4.02
2990 3957 5.290386 CGTACCCCTAGATCTCAATTTGAC 58.710 45.833 0.00 0.00 0.00 3.18
2991 3958 4.202223 GCGTACCCCTAGATCTCAATTTGA 60.202 45.833 0.00 0.00 0.00 2.69
2992 3959 4.058817 GCGTACCCCTAGATCTCAATTTG 58.941 47.826 0.00 0.00 0.00 2.32
2993 3960 3.243771 CGCGTACCCCTAGATCTCAATTT 60.244 47.826 0.00 0.00 0.00 1.82
2994 3961 2.296471 CGCGTACCCCTAGATCTCAATT 59.704 50.000 0.00 0.00 0.00 2.32
2995 3962 1.887198 CGCGTACCCCTAGATCTCAAT 59.113 52.381 0.00 0.00 0.00 2.57
2996 3963 1.315690 CGCGTACCCCTAGATCTCAA 58.684 55.000 0.00 0.00 0.00 3.02
2997 3964 1.170919 GCGCGTACCCCTAGATCTCA 61.171 60.000 8.43 0.00 0.00 3.27
2998 3965 1.170919 TGCGCGTACCCCTAGATCTC 61.171 60.000 8.43 0.00 0.00 2.75
2999 3966 1.152819 TGCGCGTACCCCTAGATCT 60.153 57.895 8.43 0.00 0.00 2.75
3000 3967 1.007618 GTGCGCGTACCCCTAGATC 60.008 63.158 17.10 0.00 0.00 2.75
3001 3968 1.755395 TGTGCGCGTACCCCTAGAT 60.755 57.895 24.54 0.00 0.00 1.98
3002 3969 2.361483 TGTGCGCGTACCCCTAGA 60.361 61.111 24.54 1.37 0.00 2.43
3003 3970 2.202703 GTGTGCGCGTACCCCTAG 60.203 66.667 24.54 0.00 0.00 3.02
3004 3971 3.762247 GGTGTGCGCGTACCCCTA 61.762 66.667 24.54 2.60 0.00 3.53
3008 3975 2.768503 TTACAGGGTGTGCGCGTACC 62.769 60.000 24.54 20.91 36.21 3.34
3009 3976 0.945265 TTTACAGGGTGTGCGCGTAC 60.945 55.000 21.02 21.02 0.00 3.67
3010 3977 0.945265 GTTTACAGGGTGTGCGCGTA 60.945 55.000 8.43 0.00 0.00 4.42
3011 3978 2.109387 TTTACAGGGTGTGCGCGT 59.891 55.556 8.43 0.00 0.00 6.01
3012 3979 1.959226 AGTTTACAGGGTGTGCGCG 60.959 57.895 0.00 0.00 0.00 6.86
3013 3980 0.882927 TCAGTTTACAGGGTGTGCGC 60.883 55.000 0.00 0.00 0.00 6.09
3014 3981 1.148310 CTCAGTTTACAGGGTGTGCG 58.852 55.000 0.00 0.00 0.00 5.34
3015 3982 2.543777 TCTCAGTTTACAGGGTGTGC 57.456 50.000 0.00 0.00 0.00 4.57
3016 3983 4.703897 TCTTTCTCAGTTTACAGGGTGTG 58.296 43.478 0.00 0.00 0.00 3.82
3017 3984 4.202367 CCTCTTTCTCAGTTTACAGGGTGT 60.202 45.833 0.00 0.00 0.00 4.16
3018 3985 4.319177 CCTCTTTCTCAGTTTACAGGGTG 58.681 47.826 0.00 0.00 0.00 4.61
3019 3986 3.328050 CCCTCTTTCTCAGTTTACAGGGT 59.672 47.826 0.00 0.00 35.49 4.34
3020 3987 3.583086 TCCCTCTTTCTCAGTTTACAGGG 59.417 47.826 0.00 0.00 40.83 4.45
3021 3988 4.284746 ACTCCCTCTTTCTCAGTTTACAGG 59.715 45.833 0.00 0.00 0.00 4.00
3022 3989 5.476091 ACTCCCTCTTTCTCAGTTTACAG 57.524 43.478 0.00 0.00 0.00 2.74
3023 3990 6.015350 CACTACTCCCTCTTTCTCAGTTTACA 60.015 42.308 0.00 0.00 0.00 2.41
3024 3991 6.015265 ACACTACTCCCTCTTTCTCAGTTTAC 60.015 42.308 0.00 0.00 0.00 2.01
3025 3992 6.075984 ACACTACTCCCTCTTTCTCAGTTTA 58.924 40.000 0.00 0.00 0.00 2.01
3026 3993 4.902448 ACACTACTCCCTCTTTCTCAGTTT 59.098 41.667 0.00 0.00 0.00 2.66
3027 3994 4.484912 ACACTACTCCCTCTTTCTCAGTT 58.515 43.478 0.00 0.00 0.00 3.16
3028 3995 4.120946 ACACTACTCCCTCTTTCTCAGT 57.879 45.455 0.00 0.00 0.00 3.41
3029 3996 5.888724 TCATACACTACTCCCTCTTTCTCAG 59.111 44.000 0.00 0.00 0.00 3.35
3030 3997 5.827756 TCATACACTACTCCCTCTTTCTCA 58.172 41.667 0.00 0.00 0.00 3.27
3031 3998 6.969993 ATCATACACTACTCCCTCTTTCTC 57.030 41.667 0.00 0.00 0.00 2.87
3032 3999 7.588169 AGTATCATACACTACTCCCTCTTTCT 58.412 38.462 0.00 0.00 0.00 2.52
3033 4000 7.826918 AGTATCATACACTACTCCCTCTTTC 57.173 40.000 0.00 0.00 0.00 2.62
3034 4001 7.724951 GGTAGTATCATACACTACTCCCTCTTT 59.275 40.741 11.28 0.00 45.06 2.52
3035 4002 7.073981 AGGTAGTATCATACACTACTCCCTCTT 59.926 40.741 11.28 0.00 45.06 2.85
3036 4003 6.563379 AGGTAGTATCATACACTACTCCCTCT 59.437 42.308 11.28 0.00 45.06 3.69
3037 4004 6.781943 AGGTAGTATCATACACTACTCCCTC 58.218 44.000 11.28 0.00 45.06 4.30
3038 4005 6.783517 AGGTAGTATCATACACTACTCCCT 57.216 41.667 11.28 0.00 45.06 4.20
3039 4006 7.002879 TGAAGGTAGTATCATACACTACTCCC 58.997 42.308 11.28 0.00 45.06 4.30
3040 4007 8.638629 ATGAAGGTAGTATCATACACTACTCC 57.361 38.462 11.28 0.00 45.06 3.85
3152 4202 8.730948 AGGGTTAGAGTAACATAGGTAGATACA 58.269 37.037 0.00 0.00 40.39 2.29
3188 4238 4.433186 CCGATGTGGCAAACAATTAAGA 57.567 40.909 0.00 0.00 43.61 2.10
3208 4258 2.167900 ACTCGGGACTAGTAAACATGCC 59.832 50.000 0.00 0.00 30.55 4.40
3298 4348 6.235664 TGTAAAGTTAGACCTTCAATCCCAC 58.764 40.000 0.00 0.00 0.00 4.61
3371 4421 7.659186 ACTCCGATCCATAATAAGTGTACTTC 58.341 38.462 0.00 0.00 37.40 3.01
3417 4471 5.309323 GCAGTTGGCACACTATGAAATAA 57.691 39.130 0.00 0.00 43.97 1.40
3559 4613 4.452733 CGGGACCGAAGCAGACCC 62.453 72.222 4.40 0.00 42.83 4.46
3667 4733 6.575162 AAAAAGAGTCAGAAACACAACACT 57.425 33.333 0.00 0.00 0.00 3.55
3742 4808 2.491693 CGAACCCATAAACTGCACCAAT 59.508 45.455 0.00 0.00 0.00 3.16
3773 4840 6.412362 ACTACCATTACAATTTTGCCAACA 57.588 33.333 0.00 0.00 0.00 3.33
3957 5024 8.383175 TGGAAACTTGAGGTCTTCATTTATAGT 58.617 33.333 0.00 0.00 35.27 2.12
4048 5123 2.208431 GATGTGATTGCTCTCTTCCCG 58.792 52.381 0.00 0.00 0.00 5.14
4120 5195 3.173965 CATTATGGGACGGAGGGAGTAT 58.826 50.000 0.00 0.00 0.00 2.12
4121 5196 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
4122 5197 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
4123 5198 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
4124 5199 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
4125 5200 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
4126 5201 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
4127 5202 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
4128 5203 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
4164 5239 9.211485 CTCCGTCCCATAATATAATACGTTTTT 57.789 33.333 0.00 0.00 0.00 1.94
4165 5240 7.820872 CCTCCGTCCCATAATATAATACGTTTT 59.179 37.037 0.00 0.00 0.00 2.43
4166 5241 7.325694 CCTCCGTCCCATAATATAATACGTTT 58.674 38.462 0.00 0.00 0.00 3.60
4167 5242 6.127253 CCCTCCGTCCCATAATATAATACGTT 60.127 42.308 0.00 0.00 0.00 3.99
4168 5243 5.361857 CCCTCCGTCCCATAATATAATACGT 59.638 44.000 0.00 0.00 0.00 3.57
4169 5244 5.595542 TCCCTCCGTCCCATAATATAATACG 59.404 44.000 0.00 0.00 0.00 3.06
4170 5245 6.610425 ACTCCCTCCGTCCCATAATATAATAC 59.390 42.308 0.00 0.00 0.00 1.89
4171 5246 6.748969 ACTCCCTCCGTCCCATAATATAATA 58.251 40.000 0.00 0.00 0.00 0.98
4172 5247 5.600749 ACTCCCTCCGTCCCATAATATAAT 58.399 41.667 0.00 0.00 0.00 1.28
4173 5248 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4174 5249 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4175 5250 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4176 5251 3.659195 TCTACTCCCTCCGTCCCATAATA 59.341 47.826 0.00 0.00 0.00 0.98
4177 5252 2.449730 TCTACTCCCTCCGTCCCATAAT 59.550 50.000 0.00 0.00 0.00 1.28
4178 5253 1.854939 TCTACTCCCTCCGTCCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
4179 5254 1.526315 TCTACTCCCTCCGTCCCATA 58.474 55.000 0.00 0.00 0.00 2.74
4180 5255 0.861155 ATCTACTCCCTCCGTCCCAT 59.139 55.000 0.00 0.00 0.00 4.00
4181 5256 0.106167 CATCTACTCCCTCCGTCCCA 60.106 60.000 0.00 0.00 0.00 4.37
4182 5257 1.465200 GCATCTACTCCCTCCGTCCC 61.465 65.000 0.00 0.00 0.00 4.46
4183 5258 0.468400 AGCATCTACTCCCTCCGTCC 60.468 60.000 0.00 0.00 0.00 4.79
4184 5259 2.273538 TAGCATCTACTCCCTCCGTC 57.726 55.000 0.00 0.00 0.00 4.79
4185 5260 2.158445 ACATAGCATCTACTCCCTCCGT 60.158 50.000 0.00 0.00 0.00 4.69
4186 5261 2.520069 ACATAGCATCTACTCCCTCCG 58.480 52.381 0.00 0.00 0.00 4.63
4187 5262 5.515106 AGATACATAGCATCTACTCCCTCC 58.485 45.833 0.00 0.00 30.89 4.30
4188 5263 9.280174 GTATAGATACATAGCATCTACTCCCTC 57.720 40.741 0.00 0.00 37.72 4.30
4189 5264 9.009675 AGTATAGATACATAGCATCTACTCCCT 57.990 37.037 2.66 0.00 37.72 4.20
4229 5304 2.112522 CACATGTAGCGCTTAGAGACG 58.887 52.381 18.68 0.26 0.00 4.18
4246 5322 2.288948 GCAGGACCATGCATTTTTCACA 60.289 45.455 0.00 0.00 45.77 3.58
4353 5429 1.202417 AGCAATACGTCCATCACTCCG 60.202 52.381 0.00 0.00 0.00 4.63
4432 5508 8.072567 GCACAGATAACCAATGAAGTGAATATC 58.927 37.037 0.00 0.00 0.00 1.63
4628 5704 2.234414 CCCATAACACAGGCTGCAAAAT 59.766 45.455 15.89 0.52 0.00 1.82
4655 5733 5.552870 TTGAAGAAGGCTACCCTATCATC 57.447 43.478 0.00 0.00 41.90 2.92
4661 5739 4.536489 AGTACAATTGAAGAAGGCTACCCT 59.464 41.667 13.59 0.00 45.77 4.34
4757 5896 4.681025 CACAACCAAATCAGTGCACATTAC 59.319 41.667 21.04 0.00 0.00 1.89
4787 5927 4.875536 TGCATCAACAATATAGCACTCGTT 59.124 37.500 0.00 0.00 0.00 3.85
4872 6013 2.062971 ATGGAATGTGCAAGGCCTAG 57.937 50.000 5.16 0.00 0.00 3.02
4964 6112 1.712056 TTCTCCTGTCTTTGACCCGA 58.288 50.000 0.00 0.00 0.00 5.14
5016 6164 6.996180 ATAAGGTATAAGCCAGCTCAGTTA 57.004 37.500 0.00 0.00 0.00 2.24
5078 6229 7.093068 TGCTTGGTATTATCAACCTGAGTTAGA 60.093 37.037 0.00 0.00 37.91 2.10
5097 6248 5.987347 CAGATTTCAATTTCACTTGCTTGGT 59.013 36.000 0.00 0.00 0.00 3.67
5099 6250 7.568861 GCTTCAGATTTCAATTTCACTTGCTTG 60.569 37.037 0.00 0.00 0.00 4.01
5118 6269 3.947196 ACAGTGTCATTGTTTGCTTCAGA 59.053 39.130 0.00 0.00 0.00 3.27
5259 6411 6.261826 CCATAGGATTTTAGGTGCAGAAGAAG 59.738 42.308 0.00 0.00 0.00 2.85
5339 6491 4.817517 TCCGGTAATTTCTCAACACTCTC 58.182 43.478 0.00 0.00 0.00 3.20
5367 6519 0.381801 GCTTGCCCCATTATGTGTCG 59.618 55.000 0.00 0.00 0.00 4.35
5407 6559 4.860802 TCTATCAAAAGGCCCATTCTGA 57.139 40.909 0.00 2.99 0.00 3.27
5616 6768 2.642427 TCTCAGCTGAAAACACTTGCA 58.358 42.857 18.85 0.00 0.00 4.08
5646 6798 7.118723 AGTAATGCCATGAAGATACTTGGAAA 58.881 34.615 0.00 0.00 37.29 3.13
5891 7043 1.130054 AGCAAGTGAGAGGGGCAAGA 61.130 55.000 0.00 0.00 0.00 3.02
6150 7302 6.316390 GCATAATAGAACTAACCAGTGTTGCT 59.684 38.462 0.00 0.00 34.36 3.91
6155 7307 6.484643 AGCATGCATAATAGAACTAACCAGTG 59.515 38.462 21.98 0.00 34.36 3.66
6156 7308 6.595682 AGCATGCATAATAGAACTAACCAGT 58.404 36.000 21.98 0.00 36.19 4.00
6160 7312 7.439356 TGTGAGAGCATGCATAATAGAACTAAC 59.561 37.037 21.98 8.08 0.00 2.34
6165 7317 6.796705 CATGTGAGAGCATGCATAATAGAA 57.203 37.500 21.98 0.00 39.59 2.10
6256 7410 6.875726 CAGATTCTTGATGAGTTAAGTGGACA 59.124 38.462 0.00 0.00 0.00 4.02
6301 7455 2.038557 TGAGGGCAAAGTTCCACTAGAC 59.961 50.000 0.00 0.00 0.00 2.59
6310 7464 2.362077 GTGTTCATGTGAGGGCAAAGTT 59.638 45.455 0.00 0.00 0.00 2.66
6311 7465 1.956477 GTGTTCATGTGAGGGCAAAGT 59.044 47.619 0.00 0.00 0.00 2.66
6332 7486 6.477688 GCTTGCATTGTAATCTTGCATGTATT 59.522 34.615 10.42 1.96 45.04 1.89
6497 7651 3.375299 GGTATAGCAGCACCAACAGAAAG 59.625 47.826 0.00 0.00 34.77 2.62
6544 7698 3.563223 AGGCTGTGTGTAGTATATCGGT 58.437 45.455 0.00 0.00 0.00 4.69
6780 7934 4.322349 GGATATCCTGGCTACAACTAGCAG 60.322 50.000 14.97 0.00 46.58 4.24
6845 7999 2.166254 CGCTTTCTGGGGCAATTATTGT 59.834 45.455 6.81 0.00 0.00 2.71
6892 8046 3.056393 CACTATCCAGTCCGTTGTAACCA 60.056 47.826 0.00 0.00 30.46 3.67
6901 8055 1.267261 GACCGATCACTATCCAGTCCG 59.733 57.143 0.00 0.00 30.46 4.79
7015 8169 5.515982 GCGCATACATGATTTGTGAATTTGA 59.484 36.000 0.30 0.00 39.48 2.69
7210 8364 3.511934 ACTAGTCTGTTTCCGCATCTTCT 59.488 43.478 0.00 0.00 0.00 2.85
7271 8432 2.187896 TTTAAACGCCCCTCCCTCGG 62.188 60.000 0.00 0.00 0.00 4.63
7281 8442 7.547019 ACTCTTACCAGTTATACTTTAAACGCC 59.453 37.037 0.00 0.00 0.00 5.68
7283 8444 9.630098 TCACTCTTACCAGTTATACTTTAAACG 57.370 33.333 0.00 0.00 0.00 3.60
7370 8531 5.242838 ACCATGTCAATAAACAACCGACAAT 59.757 36.000 0.00 0.00 39.80 2.71
7406 8567 5.163814 CCAGAGGATTTTCAATTCGACACTC 60.164 44.000 0.00 0.00 0.00 3.51
7407 8568 4.697352 CCAGAGGATTTTCAATTCGACACT 59.303 41.667 0.00 0.00 0.00 3.55
7515 11595 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
7516 11596 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
7517 11597 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
7518 11598 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
7519 11599 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
7520 11600 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
7521 11601 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
7522 11602 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
7523 11603 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
7524 11604 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
7525 11605 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
7526 11606 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
7527 11607 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
7528 11608 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
7529 11609 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
7530 11610 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
7573 11653 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
7581 11661 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
7587 11667 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
7590 11670 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
7591 11671 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
7592 11672 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
7593 11673 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
7594 11674 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
7595 11675 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
7603 11683 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
7604 11684 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
7605 11685 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
7606 11686 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
7607 11687 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
7608 11688 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
7609 11689 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
7610 11690 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
7611 11691 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
7612 11692 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
7613 11693 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
7614 11694 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
7615 11695 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
7616 11696 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
7617 11697 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
7618 11698 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
7619 11699 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
7620 11700 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
7621 11701 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
7622 11702 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
7623 11703 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
7624 11704 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
7625 11705 2.262774 GACTACTCCCTCCGTCCGGA 62.263 65.000 0.00 0.00 42.90 5.14
7626 11706 1.823041 GACTACTCCCTCCGTCCGG 60.823 68.421 0.00 0.00 0.00 5.14
7627 11707 1.077930 TGACTACTCCCTCCGTCCG 60.078 63.158 0.00 0.00 0.00 4.79
7628 11708 0.034283 ACTGACTACTCCCTCCGTCC 60.034 60.000 0.00 0.00 0.00 4.79
7629 11709 2.706339 TACTGACTACTCCCTCCGTC 57.294 55.000 0.00 0.00 0.00 4.79
7630 11710 2.944991 GCTTACTGACTACTCCCTCCGT 60.945 54.545 0.00 0.00 0.00 4.69
7631 11711 1.677052 GCTTACTGACTACTCCCTCCG 59.323 57.143 0.00 0.00 0.00 4.63
7632 11712 2.033372 GGCTTACTGACTACTCCCTCC 58.967 57.143 0.00 0.00 0.00 4.30
7633 11713 3.021177 AGGCTTACTGACTACTCCCTC 57.979 52.381 0.00 0.00 27.54 4.30
7634 11714 3.100671 CAAGGCTTACTGACTACTCCCT 58.899 50.000 0.00 0.00 30.64 4.20
7635 11715 2.418884 GCAAGGCTTACTGACTACTCCC 60.419 54.545 0.00 0.00 30.64 4.30
7636 11716 2.498078 AGCAAGGCTTACTGACTACTCC 59.502 50.000 0.00 0.00 33.89 3.85
7637 11717 3.878160 AGCAAGGCTTACTGACTACTC 57.122 47.619 0.00 0.00 33.89 2.59
7753 11833 3.160679 ACAGGGGTTTGAGATGAAAGG 57.839 47.619 0.00 0.00 0.00 3.11
7845 11925 6.291377 TGCTACTCTATTATGGCCTCAAAAG 58.709 40.000 3.32 0.00 0.00 2.27
7937 14324 4.397420 TGAGAAGTGCATGTGTAATGGTT 58.603 39.130 0.00 0.00 0.00 3.67
7974 14361 8.100508 AGGAAACTTTTGTAAGATAAGAGTGC 57.899 34.615 0.00 0.00 37.44 4.40
7980 14367 9.569122 AAGTGCTAGGAAACTTTTGTAAGATAA 57.431 29.630 0.00 0.00 43.67 1.75
7997 14384 2.479566 TGGAGCTCAAAAGTGCTAGG 57.520 50.000 17.19 0.00 39.91 3.02
7999 14386 3.261643 TCTCATGGAGCTCAAAAGTGCTA 59.738 43.478 17.19 0.00 39.91 3.49
8001 14388 2.161211 GTCTCATGGAGCTCAAAAGTGC 59.839 50.000 17.19 0.00 0.00 4.40
8076 14463 1.001181 CCTGGATTGGCACCAAACAAG 59.999 52.381 6.14 6.65 39.55 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.