Multiple sequence alignment - TraesCS4B01G112900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G112900 chr4B 100.000 2810 0 0 1 2810 127689083 127686274 0.000000e+00 5190
1 TraesCS4B01G112900 chr4A 91.462 1710 100 16 445 2124 503237275 503235582 0.000000e+00 2307
2 TraesCS4B01G112900 chr4A 96.845 317 10 0 2483 2799 656463070 656462754 5.330000e-147 531
3 TraesCS4B01G112900 chr4A 96.845 317 10 0 2483 2799 691670244 691670560 5.330000e-147 531
4 TraesCS4B01G112900 chr4D 95.113 1146 47 8 946 2085 91060784 91059642 0.000000e+00 1797
5 TraesCS4B01G112900 chr4D 84.409 744 78 16 218 931 91066693 91065958 0.000000e+00 697
6 TraesCS4B01G112900 chr4D 93.703 397 15 7 2083 2478 91059289 91058902 1.120000e-163 586
7 TraesCS4B01G112900 chr2B 97.531 324 8 0 2483 2806 635785488 635785811 3.160000e-154 555
8 TraesCS4B01G112900 chr2B 96.845 317 10 0 2483 2799 120607557 120607873 5.330000e-147 531
9 TraesCS4B01G112900 chr2B 77.451 204 39 6 1279 1480 572678619 572678421 6.360000e-22 115
10 TraesCS4B01G112900 chr5B 97.792 317 7 0 2483 2799 230998201 230997885 5.290000e-152 547
11 TraesCS4B01G112900 chr6B 97.476 317 8 0 2483 2799 692959916 692959600 2.460000e-150 542
12 TraesCS4B01G112900 chr6B 78.723 188 27 9 1280 1462 515022088 515022267 2.290000e-21 113
13 TraesCS4B01G112900 chr1B 97.161 317 9 0 2483 2799 21796145 21795829 1.150000e-148 536
14 TraesCS4B01G112900 chr1B 96.594 323 11 0 2483 2805 98569686 98570008 1.150000e-148 536
15 TraesCS4B01G112900 chr3B 96.845 317 10 0 2483 2799 746245719 746245403 5.330000e-147 531
16 TraesCS4B01G112900 chr6A 78.744 207 31 9 1279 1480 448351793 448351595 2.940000e-25 126
17 TraesCS4B01G112900 chr6D 78.261 207 32 8 1279 1480 311582610 311582412 1.370000e-23 121
18 TraesCS4B01G112900 chr2D 77.451 204 39 6 1279 1480 488364288 488364090 6.360000e-22 115
19 TraesCS4B01G112900 chr2D 77.451 204 39 6 1279 1480 488472349 488472151 6.360000e-22 115
20 TraesCS4B01G112900 chr2A 77.451 204 39 6 1279 1480 632929001 632928803 6.360000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G112900 chr4B 127686274 127689083 2809 True 5190.0 5190 100.000 1 2810 1 chr4B.!!$R1 2809
1 TraesCS4B01G112900 chr4A 503235582 503237275 1693 True 2307.0 2307 91.462 445 2124 1 chr4A.!!$R1 1679
2 TraesCS4B01G112900 chr4D 91058902 91060784 1882 True 1191.5 1797 94.408 946 2478 2 chr4D.!!$R2 1532
3 TraesCS4B01G112900 chr4D 91065958 91066693 735 True 697.0 697 84.409 218 931 1 chr4D.!!$R1 713

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 308 0.036388 TCGACCTGATCCCAAACTGC 60.036 55.0 0.0 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 1886 0.753479 TTCAAGCTTCACCCGCCAAA 60.753 50.0 0.0 0.0 0.0 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.422073 CCTTATGGCAAGACTATCCACA 57.578 45.455 0.00 0.00 31.94 4.17
32 33 4.130118 CCTTATGGCAAGACTATCCACAC 58.870 47.826 0.00 0.00 31.94 3.82
33 34 2.717639 ATGGCAAGACTATCCACACC 57.282 50.000 0.00 0.00 31.94 4.16
34 35 0.618458 TGGCAAGACTATCCACACCC 59.382 55.000 0.00 0.00 0.00 4.61
35 36 0.618458 GGCAAGACTATCCACACCCA 59.382 55.000 0.00 0.00 0.00 4.51
36 37 1.679032 GGCAAGACTATCCACACCCAC 60.679 57.143 0.00 0.00 0.00 4.61
37 38 1.003118 GCAAGACTATCCACACCCACA 59.997 52.381 0.00 0.00 0.00 4.17
38 39 2.699954 CAAGACTATCCACACCCACAC 58.300 52.381 0.00 0.00 0.00 3.82
39 40 2.024176 AGACTATCCACACCCACACA 57.976 50.000 0.00 0.00 0.00 3.72
40 41 2.334977 AGACTATCCACACCCACACAA 58.665 47.619 0.00 0.00 0.00 3.33
41 42 2.038557 AGACTATCCACACCCACACAAC 59.961 50.000 0.00 0.00 0.00 3.32
42 43 2.038557 GACTATCCACACCCACACAACT 59.961 50.000 0.00 0.00 0.00 3.16
43 44 2.441750 ACTATCCACACCCACACAACTT 59.558 45.455 0.00 0.00 0.00 2.66
44 45 1.691196 ATCCACACCCACACAACTTG 58.309 50.000 0.00 0.00 0.00 3.16
45 46 0.329931 TCCACACCCACACAACTTGT 59.670 50.000 0.00 0.00 39.97 3.16
46 47 1.560146 TCCACACCCACACAACTTGTA 59.440 47.619 0.00 0.00 35.67 2.41
47 48 1.946768 CCACACCCACACAACTTGTAG 59.053 52.381 0.00 0.00 35.67 2.74
48 49 2.420827 CCACACCCACACAACTTGTAGA 60.421 50.000 0.00 0.00 35.67 2.59
49 50 2.872245 CACACCCACACAACTTGTAGAG 59.128 50.000 0.00 0.00 35.67 2.43
50 51 2.504175 ACACCCACACAACTTGTAGAGT 59.496 45.455 0.00 0.00 41.47 3.24
51 52 3.707611 ACACCCACACAACTTGTAGAGTA 59.292 43.478 0.00 0.00 37.72 2.59
52 53 4.347000 ACACCCACACAACTTGTAGAGTAT 59.653 41.667 0.00 0.00 37.72 2.12
53 54 5.163237 ACACCCACACAACTTGTAGAGTATT 60.163 40.000 0.00 0.00 37.72 1.89
54 55 5.408604 CACCCACACAACTTGTAGAGTATTC 59.591 44.000 0.00 0.00 37.72 1.75
55 56 4.935808 CCCACACAACTTGTAGAGTATTCC 59.064 45.833 0.00 0.00 37.72 3.01
56 57 5.512404 CCCACACAACTTGTAGAGTATTCCA 60.512 44.000 0.00 0.00 37.72 3.53
57 58 5.995282 CCACACAACTTGTAGAGTATTCCAA 59.005 40.000 0.00 0.00 37.72 3.53
58 59 6.073222 CCACACAACTTGTAGAGTATTCCAAC 60.073 42.308 0.00 0.00 37.72 3.77
59 60 6.706270 CACACAACTTGTAGAGTATTCCAACT 59.294 38.462 0.00 0.00 37.72 3.16
60 61 7.226720 CACACAACTTGTAGAGTATTCCAACTT 59.773 37.037 0.00 0.00 37.72 2.66
61 62 7.441458 ACACAACTTGTAGAGTATTCCAACTTC 59.559 37.037 0.00 0.00 37.72 3.01
62 63 7.657761 CACAACTTGTAGAGTATTCCAACTTCT 59.342 37.037 0.00 0.00 37.72 2.85
63 64 7.657761 ACAACTTGTAGAGTATTCCAACTTCTG 59.342 37.037 0.00 0.00 37.72 3.02
64 65 6.702329 ACTTGTAGAGTATTCCAACTTCTGG 58.298 40.000 0.00 0.00 41.14 3.86
65 66 6.497259 ACTTGTAGAGTATTCCAACTTCTGGA 59.503 38.462 0.00 0.00 44.50 3.86
66 67 7.181125 ACTTGTAGAGTATTCCAACTTCTGGAT 59.819 37.037 0.00 0.00 45.09 3.41
76 77 4.796038 CAACTTCTGGATGCCAATTTCT 57.204 40.909 0.00 0.00 30.80 2.52
77 78 5.143376 CAACTTCTGGATGCCAATTTCTT 57.857 39.130 0.00 0.00 30.80 2.52
78 79 5.166398 CAACTTCTGGATGCCAATTTCTTC 58.834 41.667 0.00 0.00 30.80 2.87
79 80 3.766051 ACTTCTGGATGCCAATTTCTTCC 59.234 43.478 0.00 3.64 30.80 3.46
80 81 3.454719 TCTGGATGCCAATTTCTTCCA 57.545 42.857 10.06 10.06 36.64 3.53
81 82 3.091545 TCTGGATGCCAATTTCTTCCAC 58.908 45.455 7.58 0.00 35.02 4.02
82 83 3.094572 CTGGATGCCAATTTCTTCCACT 58.905 45.455 7.58 0.00 35.02 4.00
83 84 3.509442 TGGATGCCAATTTCTTCCACTT 58.491 40.909 7.58 0.00 34.20 3.16
84 85 3.903090 TGGATGCCAATTTCTTCCACTTT 59.097 39.130 7.58 0.00 34.20 2.66
85 86 4.248058 GGATGCCAATTTCTTCCACTTTG 58.752 43.478 5.14 0.00 0.00 2.77
86 87 4.262592 GGATGCCAATTTCTTCCACTTTGT 60.263 41.667 5.14 0.00 0.00 2.83
87 88 4.751767 TGCCAATTTCTTCCACTTTGTT 57.248 36.364 0.00 0.00 0.00 2.83
88 89 5.096443 TGCCAATTTCTTCCACTTTGTTT 57.904 34.783 0.00 0.00 0.00 2.83
89 90 6.227298 TGCCAATTTCTTCCACTTTGTTTA 57.773 33.333 0.00 0.00 0.00 2.01
90 91 6.279882 TGCCAATTTCTTCCACTTTGTTTAG 58.720 36.000 0.00 0.00 0.00 1.85
91 92 6.097554 TGCCAATTTCTTCCACTTTGTTTAGA 59.902 34.615 0.00 0.00 0.00 2.10
92 93 7.154656 GCCAATTTCTTCCACTTTGTTTAGAT 58.845 34.615 0.00 0.00 0.00 1.98
93 94 8.303876 GCCAATTTCTTCCACTTTGTTTAGATA 58.696 33.333 0.00 0.00 0.00 1.98
99 100 9.959721 TTCTTCCACTTTGTTTAGATATAAGCT 57.040 29.630 0.00 0.00 0.00 3.74
100 101 9.959721 TCTTCCACTTTGTTTAGATATAAGCTT 57.040 29.630 3.48 3.48 0.00 3.74
101 102 9.994432 CTTCCACTTTGTTTAGATATAAGCTTG 57.006 33.333 9.86 0.00 0.00 4.01
102 103 9.733556 TTCCACTTTGTTTAGATATAAGCTTGA 57.266 29.630 9.86 0.00 0.00 3.02
103 104 9.733556 TCCACTTTGTTTAGATATAAGCTTGAA 57.266 29.630 9.86 0.00 0.00 2.69
104 105 9.994432 CCACTTTGTTTAGATATAAGCTTGAAG 57.006 33.333 9.86 0.00 0.00 3.02
126 127 9.416284 TGAAGATAAATTTTACATTAGGACCCC 57.584 33.333 0.00 0.00 0.00 4.95
127 128 8.777578 AAGATAAATTTTACATTAGGACCCCC 57.222 34.615 0.00 0.00 0.00 5.40
151 152 8.330466 CCCCCAAGAAAATAAAATTACAAACC 57.670 34.615 0.00 0.00 0.00 3.27
152 153 7.939588 CCCCCAAGAAAATAAAATTACAAACCA 59.060 33.333 0.00 0.00 0.00 3.67
153 154 8.998377 CCCCAAGAAAATAAAATTACAAACCAG 58.002 33.333 0.00 0.00 0.00 4.00
154 155 9.554395 CCCAAGAAAATAAAATTACAAACCAGT 57.446 29.630 0.00 0.00 0.00 4.00
168 169 8.749026 TTACAAACCAGTCCTAACATTTTACA 57.251 30.769 0.00 0.00 0.00 2.41
169 170 7.648039 ACAAACCAGTCCTAACATTTTACAA 57.352 32.000 0.00 0.00 0.00 2.41
170 171 8.068892 ACAAACCAGTCCTAACATTTTACAAA 57.931 30.769 0.00 0.00 0.00 2.83
171 172 8.532819 ACAAACCAGTCCTAACATTTTACAAAA 58.467 29.630 0.00 0.00 0.00 2.44
172 173 9.372369 CAAACCAGTCCTAACATTTTACAAAAA 57.628 29.630 0.00 0.00 0.00 1.94
173 174 9.594478 AAACCAGTCCTAACATTTTACAAAAAG 57.406 29.630 0.00 0.00 0.00 2.27
174 175 7.722363 ACCAGTCCTAACATTTTACAAAAAGG 58.278 34.615 0.00 0.00 0.00 3.11
175 176 6.645003 CCAGTCCTAACATTTTACAAAAAGGC 59.355 38.462 0.00 0.00 0.00 4.35
176 177 6.645003 CAGTCCTAACATTTTACAAAAAGGCC 59.355 38.462 0.00 0.00 0.00 5.19
177 178 6.553476 AGTCCTAACATTTTACAAAAAGGCCT 59.447 34.615 0.00 0.00 0.00 5.19
178 179 7.726738 AGTCCTAACATTTTACAAAAAGGCCTA 59.273 33.333 5.16 0.00 0.00 3.93
179 180 8.361889 GTCCTAACATTTTACAAAAAGGCCTAA 58.638 33.333 5.16 0.00 0.00 2.69
180 181 8.581578 TCCTAACATTTTACAAAAAGGCCTAAG 58.418 33.333 5.16 0.00 0.00 2.18
181 182 8.581578 CCTAACATTTTACAAAAAGGCCTAAGA 58.418 33.333 5.16 0.00 0.00 2.10
184 185 8.189119 ACATTTTACAAAAAGGCCTAAGATCA 57.811 30.769 5.16 0.00 0.00 2.92
185 186 8.815912 ACATTTTACAAAAAGGCCTAAGATCAT 58.184 29.630 5.16 0.00 0.00 2.45
186 187 9.090692 CATTTTACAAAAAGGCCTAAGATCATG 57.909 33.333 5.16 1.13 0.00 3.07
187 188 6.773976 TTACAAAAAGGCCTAAGATCATGG 57.226 37.500 5.16 0.00 0.00 3.66
188 189 4.677182 ACAAAAAGGCCTAAGATCATGGT 58.323 39.130 5.16 0.00 0.00 3.55
189 190 4.463891 ACAAAAAGGCCTAAGATCATGGTG 59.536 41.667 5.16 0.00 0.00 4.17
190 191 2.355010 AAGGCCTAAGATCATGGTGC 57.645 50.000 5.16 0.00 0.00 5.01
191 192 1.216064 AGGCCTAAGATCATGGTGCA 58.784 50.000 1.29 0.00 0.00 4.57
192 193 1.565759 AGGCCTAAGATCATGGTGCAA 59.434 47.619 1.29 0.00 0.00 4.08
193 194 1.678101 GGCCTAAGATCATGGTGCAAC 59.322 52.381 0.00 0.00 0.00 4.17
194 195 1.331756 GCCTAAGATCATGGTGCAACG 59.668 52.381 0.00 0.00 38.12 4.10
195 196 2.632377 CCTAAGATCATGGTGCAACGT 58.368 47.619 0.00 0.00 38.12 3.99
196 197 3.009723 CCTAAGATCATGGTGCAACGTT 58.990 45.455 0.00 0.00 38.12 3.99
197 198 2.995466 AAGATCATGGTGCAACGTTG 57.005 45.000 23.90 23.90 38.12 4.10
210 211 3.933740 CAACGTTGCAATTCAATCGAC 57.066 42.857 16.51 0.00 36.99 4.20
211 212 2.226262 ACGTTGCAATTCAATCGACG 57.774 45.000 0.59 0.59 41.81 5.12
212 213 1.136085 ACGTTGCAATTCAATCGACGG 60.136 47.619 0.59 0.00 40.75 4.79
213 214 1.790123 CGTTGCAATTCAATCGACGGG 60.790 52.381 0.59 0.00 36.99 5.28
214 215 0.808125 TTGCAATTCAATCGACGGGG 59.192 50.000 0.00 0.00 0.00 5.73
215 216 1.029408 TGCAATTCAATCGACGGGGG 61.029 55.000 0.00 0.00 0.00 5.40
216 217 1.727467 CAATTCAATCGACGGGGGC 59.273 57.895 0.00 0.00 0.00 5.80
229 230 2.994417 GGGGCGAAACCATTGGCA 60.994 61.111 1.54 0.00 41.54 4.92
240 241 1.250154 CCATTGGCACGATGGGTTGT 61.250 55.000 9.89 0.00 40.30 3.32
250 251 2.836154 TGGGTTGTCCACAGCTCC 59.164 61.111 0.00 0.00 41.46 4.70
255 256 1.227943 TTGTCCACAGCTCCAGCAC 60.228 57.895 0.48 0.00 45.16 4.40
256 257 2.359230 GTCCACAGCTCCAGCACC 60.359 66.667 0.48 0.00 45.16 5.01
257 258 4.007644 TCCACAGCTCCAGCACCG 62.008 66.667 0.48 0.00 45.16 4.94
258 259 4.007644 CCACAGCTCCAGCACCGA 62.008 66.667 0.48 0.00 45.16 4.69
278 279 1.304282 GGATTGCCAGGCAGAAGGA 59.696 57.895 15.50 0.00 40.61 3.36
287 288 3.873801 GCCAGGCAGAAGGATTGTAGAAA 60.874 47.826 6.55 0.00 0.00 2.52
292 293 4.271291 GGCAGAAGGATTGTAGAAATCGAC 59.729 45.833 0.00 0.00 0.00 4.20
307 308 0.036388 TCGACCTGATCCCAAACTGC 60.036 55.000 0.00 0.00 0.00 4.40
308 309 1.361668 CGACCTGATCCCAAACTGCG 61.362 60.000 0.00 0.00 0.00 5.18
357 360 1.079503 GAGTAGGCGGCTTCAAAGTG 58.920 55.000 19.76 0.00 0.00 3.16
362 365 2.252260 CGGCTTCAAAGTGCACCG 59.748 61.111 14.63 3.07 0.00 4.94
364 367 1.576421 GGCTTCAAAGTGCACCGAG 59.424 57.895 14.63 3.22 0.00 4.63
365 368 0.884704 GGCTTCAAAGTGCACCGAGA 60.885 55.000 14.63 5.89 0.00 4.04
379 382 0.734253 CCGAGAGTTCCAAGTGCTCG 60.734 60.000 0.00 0.00 45.67 5.03
380 383 1.347817 CGAGAGTTCCAAGTGCTCGC 61.348 60.000 0.00 0.00 41.35 5.03
401 404 4.427312 GCCTTTTGAACAGAATATGCAGG 58.573 43.478 0.00 0.00 0.00 4.85
402 405 4.082026 GCCTTTTGAACAGAATATGCAGGT 60.082 41.667 0.00 0.00 0.00 4.00
403 406 5.644644 CCTTTTGAACAGAATATGCAGGTC 58.355 41.667 0.00 0.00 0.00 3.85
404 407 4.944962 TTTGAACAGAATATGCAGGTCG 57.055 40.909 0.00 0.00 0.00 4.79
405 408 2.905075 TGAACAGAATATGCAGGTCGG 58.095 47.619 0.00 0.00 0.00 4.79
406 409 1.599542 GAACAGAATATGCAGGTCGGC 59.400 52.381 0.00 0.00 0.00 5.54
443 461 4.464244 TGTCTTCGACAGATCTTCTTGGAT 59.536 41.667 0.00 0.00 37.67 3.41
449 467 3.637229 GACAGATCTTCTTGGATCCGGTA 59.363 47.826 7.39 0.00 42.02 4.02
512 530 8.661352 ATTTTTGTGTTCTTTGGAGTATTTGG 57.339 30.769 0.00 0.00 0.00 3.28
545 563 4.767255 CTTCTTCTGCGGGCGGCT 62.767 66.667 18.19 0.00 44.05 5.52
568 586 1.605753 TGCTATGTAGATCGCGGACT 58.394 50.000 6.13 8.79 0.00 3.85
569 587 2.774687 TGCTATGTAGATCGCGGACTA 58.225 47.619 6.13 7.70 0.00 2.59
577 595 1.471684 AGATCGCGGACTAACGTCTTT 59.528 47.619 6.13 0.00 40.10 2.52
624 642 3.306989 CCACCACTTCTACAAGCTCATGA 60.307 47.826 0.00 0.00 32.09 3.07
625 643 4.511527 CACCACTTCTACAAGCTCATGAT 58.488 43.478 0.00 0.00 32.09 2.45
693 722 2.108157 GGCATCGTGGCGGATACA 59.892 61.111 0.00 0.00 31.79 2.29
703 733 1.343069 GGCGGATACAGGAGGAAGAT 58.657 55.000 0.00 0.00 0.00 2.40
723 753 3.026630 TGACTTCCGCACAACTAAGAG 57.973 47.619 0.00 0.00 0.00 2.85
726 756 4.038282 TGACTTCCGCACAACTAAGAGTTA 59.962 41.667 0.00 0.00 36.03 2.24
771 802 7.563888 AAGGGTTTGTTTGTAAGTACTTCTC 57.436 36.000 12.39 7.53 0.00 2.87
855 887 8.648557 TGCAATACTGTAAGACACATCTAATC 57.351 34.615 0.00 0.00 36.29 1.75
869 901 6.823689 ACACATCTAATCACCACATTTCCTAC 59.176 38.462 0.00 0.00 0.00 3.18
884 916 3.102052 TCCTACGAACACCAGAACAAC 57.898 47.619 0.00 0.00 0.00 3.32
886 918 3.057734 CCTACGAACACCAGAACAACTC 58.942 50.000 0.00 0.00 0.00 3.01
889 925 1.226746 GAACACCAGAACAACTCCGG 58.773 55.000 0.00 0.00 0.00 5.14
891 927 0.393077 ACACCAGAACAACTCCGGAG 59.607 55.000 30.11 30.11 0.00 4.63
906 942 5.050490 ACTCCGGAGAATTAAATGATGTCG 58.950 41.667 37.69 6.14 0.00 4.35
1002 1038 3.868757 TTCCTAAGGAGACGTCACATG 57.131 47.619 19.50 0.00 31.21 3.21
1061 1111 1.369839 CTGCTCTACTGCCTCGTCGA 61.370 60.000 0.00 0.00 0.00 4.20
1446 1497 2.717485 GCCATCGGCGAGTACGTA 59.283 61.111 17.22 0.00 39.62 3.57
1794 1845 2.767505 GGTCTCATGAAACTGTTCCGT 58.232 47.619 0.00 0.00 32.28 4.69
1864 1920 4.105486 GGTGAAGCTTGAACAAACTTGTC 58.895 43.478 2.10 2.21 41.31 3.18
1957 2013 5.683876 AATCCTAGCTTGTGATGTACAGT 57.316 39.130 0.33 0.00 41.10 3.55
1958 2014 6.791867 AATCCTAGCTTGTGATGTACAGTA 57.208 37.500 0.33 0.00 41.10 2.74
1959 2015 5.836821 TCCTAGCTTGTGATGTACAGTAG 57.163 43.478 0.33 0.00 41.10 2.57
2038 2094 2.069273 GCTCGTGTCATGTAAAGCTGT 58.931 47.619 0.00 0.00 0.00 4.40
2223 2634 9.483916 TTGAGTGACTAATTCAGAAAATCGTAA 57.516 29.630 0.00 0.00 33.71 3.18
2224 2635 9.140286 TGAGTGACTAATTCAGAAAATCGTAAG 57.860 33.333 0.00 0.00 33.71 2.34
2423 2835 9.456147 AACACACATATAACCAATACTTGCTTA 57.544 29.630 0.00 0.00 0.00 3.09
2455 2867 9.092876 GATTATTAGTAGCAGTGATAATGGAGC 57.907 37.037 0.00 0.00 0.00 4.70
2456 2868 5.869649 TTAGTAGCAGTGATAATGGAGCA 57.130 39.130 0.00 0.00 0.00 4.26
2460 2872 5.762218 AGTAGCAGTGATAATGGAGCAATTC 59.238 40.000 0.00 0.00 0.00 2.17
2478 2890 2.946762 GAGTGTTCCAGGTTGCGC 59.053 61.111 0.00 0.00 0.00 6.09
2479 2891 1.598130 GAGTGTTCCAGGTTGCGCT 60.598 57.895 9.73 0.00 0.00 5.92
2480 2892 0.320421 GAGTGTTCCAGGTTGCGCTA 60.320 55.000 9.73 0.00 0.00 4.26
2481 2893 0.107831 AGTGTTCCAGGTTGCGCTAA 59.892 50.000 9.73 0.00 0.00 3.09
2482 2894 0.517316 GTGTTCCAGGTTGCGCTAAG 59.483 55.000 9.73 0.00 0.00 2.18
2483 2895 0.605319 TGTTCCAGGTTGCGCTAAGG 60.605 55.000 9.73 4.35 0.00 2.69
2484 2896 0.321298 GTTCCAGGTTGCGCTAAGGA 60.321 55.000 9.73 6.90 0.00 3.36
2485 2897 0.036388 TTCCAGGTTGCGCTAAGGAG 60.036 55.000 9.73 0.00 0.00 3.69
2486 2898 1.192146 TCCAGGTTGCGCTAAGGAGT 61.192 55.000 9.73 0.00 0.00 3.85
2487 2899 1.021390 CCAGGTTGCGCTAAGGAGTG 61.021 60.000 9.73 0.00 36.19 3.51
2500 2912 4.522971 GAGTGCGCTCCCCTAAAG 57.477 61.111 16.69 0.00 35.76 1.85
2501 2913 1.153349 GAGTGCGCTCCCCTAAAGG 60.153 63.158 16.69 0.00 35.76 3.11
2502 2914 1.612442 AGTGCGCTCCCCTAAAGGA 60.612 57.895 9.73 0.00 38.24 3.36
2503 2915 0.983378 AGTGCGCTCCCCTAAAGGAT 60.983 55.000 9.73 0.00 38.24 3.24
2504 2916 0.107165 GTGCGCTCCCCTAAAGGATT 60.107 55.000 9.73 0.00 38.24 3.01
2505 2917 0.623723 TGCGCTCCCCTAAAGGATTT 59.376 50.000 9.73 0.00 43.42 2.17
2506 2918 1.309950 GCGCTCCCCTAAAGGATTTC 58.690 55.000 0.00 0.00 40.09 2.17
2507 2919 1.968704 CGCTCCCCTAAAGGATTTCC 58.031 55.000 0.00 0.00 40.09 3.13
2520 2932 3.421844 AGGATTTCCTTCGGAACAAAGG 58.578 45.455 0.00 0.00 46.09 3.11
2521 2933 3.154710 GGATTTCCTTCGGAACAAAGGT 58.845 45.455 2.10 0.00 41.87 3.50
2522 2934 4.042435 AGGATTTCCTTCGGAACAAAGGTA 59.958 41.667 0.00 0.00 46.09 3.08
2523 2935 4.948004 GGATTTCCTTCGGAACAAAGGTAT 59.052 41.667 2.10 0.00 41.87 2.73
2524 2936 5.066117 GGATTTCCTTCGGAACAAAGGTATC 59.934 44.000 2.10 6.54 41.87 2.24
2525 2937 3.241067 TCCTTCGGAACAAAGGTATCG 57.759 47.619 2.10 0.00 35.28 2.92
2526 2938 2.564062 TCCTTCGGAACAAAGGTATCGT 59.436 45.455 2.10 0.00 35.28 3.73
2527 2939 3.007182 TCCTTCGGAACAAAGGTATCGTT 59.993 43.478 2.10 0.00 35.28 3.85
2528 2940 3.749609 CCTTCGGAACAAAGGTATCGTTT 59.250 43.478 0.00 0.00 0.00 3.60
2529 2941 4.214758 CCTTCGGAACAAAGGTATCGTTTT 59.785 41.667 0.00 0.00 0.00 2.43
2530 2942 4.996062 TCGGAACAAAGGTATCGTTTTC 57.004 40.909 0.00 0.00 0.00 2.29
2531 2943 3.429543 TCGGAACAAAGGTATCGTTTTCG 59.570 43.478 0.00 0.00 45.64 3.46
2532 2944 3.485633 GGAACAAAGGTATCGTTTTCGC 58.514 45.455 0.00 0.00 43.73 4.70
2533 2945 3.187842 GGAACAAAGGTATCGTTTTCGCT 59.812 43.478 0.00 0.00 43.73 4.93
2534 2946 4.389687 GGAACAAAGGTATCGTTTTCGCTA 59.610 41.667 0.00 0.00 43.73 4.26
2535 2947 5.445540 GGAACAAAGGTATCGTTTTCGCTAG 60.446 44.000 0.00 0.00 43.73 3.42
2536 2948 4.563061 ACAAAGGTATCGTTTTCGCTAGT 58.437 39.130 0.00 0.00 43.73 2.57
2537 2949 4.387862 ACAAAGGTATCGTTTTCGCTAGTG 59.612 41.667 0.00 0.00 43.73 2.74
2538 2950 3.863142 AGGTATCGTTTTCGCTAGTGT 57.137 42.857 2.66 0.00 43.73 3.55
2539 2951 3.767278 AGGTATCGTTTTCGCTAGTGTC 58.233 45.455 2.66 0.00 43.73 3.67
2540 2952 2.529090 GGTATCGTTTTCGCTAGTGTCG 59.471 50.000 2.66 5.15 43.73 4.35
2541 2953 2.624316 ATCGTTTTCGCTAGTGTCGA 57.376 45.000 2.66 9.88 43.73 4.20
2542 2954 1.678360 TCGTTTTCGCTAGTGTCGAC 58.322 50.000 9.11 9.11 43.73 4.20
2543 2955 1.002576 TCGTTTTCGCTAGTGTCGACA 60.003 47.619 15.76 15.76 43.73 4.35
2544 2956 1.983605 CGTTTTCGCTAGTGTCGACAT 59.016 47.619 23.12 13.03 35.51 3.06
2545 2957 2.026507 CGTTTTCGCTAGTGTCGACATC 59.973 50.000 23.12 15.04 35.51 3.06
2546 2958 2.984471 GTTTTCGCTAGTGTCGACATCA 59.016 45.455 23.12 11.53 35.51 3.07
2547 2959 2.544480 TTCGCTAGTGTCGACATCAG 57.456 50.000 23.12 20.95 35.51 2.90
2548 2960 0.733150 TCGCTAGTGTCGACATCAGG 59.267 55.000 23.12 13.06 0.00 3.86
2549 2961 0.733150 CGCTAGTGTCGACATCAGGA 59.267 55.000 23.12 4.70 0.00 3.86
2550 2962 1.132453 CGCTAGTGTCGACATCAGGAA 59.868 52.381 23.12 3.15 0.00 3.36
2551 2963 2.223595 CGCTAGTGTCGACATCAGGAAT 60.224 50.000 23.12 0.00 0.00 3.01
2552 2964 3.119291 GCTAGTGTCGACATCAGGAATG 58.881 50.000 23.12 7.56 41.48 2.67
2553 2965 3.181486 GCTAGTGTCGACATCAGGAATGA 60.181 47.826 23.12 0.00 38.83 2.57
2554 2966 4.500545 GCTAGTGTCGACATCAGGAATGAT 60.501 45.833 23.12 0.96 38.83 2.45
2555 2967 5.278512 GCTAGTGTCGACATCAGGAATGATA 60.279 44.000 23.12 2.03 38.83 2.15
2556 2968 5.193663 AGTGTCGACATCAGGAATGATAG 57.806 43.478 23.12 0.00 38.83 2.08
2557 2969 4.038522 AGTGTCGACATCAGGAATGATAGG 59.961 45.833 23.12 0.00 38.83 2.57
2558 2970 3.321968 TGTCGACATCAGGAATGATAGGG 59.678 47.826 15.76 0.00 38.83 3.53
2559 2971 3.574396 GTCGACATCAGGAATGATAGGGA 59.426 47.826 11.55 0.00 38.83 4.20
2560 2972 4.221703 GTCGACATCAGGAATGATAGGGAT 59.778 45.833 11.55 0.00 38.83 3.85
2561 2973 4.221482 TCGACATCAGGAATGATAGGGATG 59.779 45.833 0.00 0.00 38.83 3.51
2562 2974 4.020751 CGACATCAGGAATGATAGGGATGT 60.021 45.833 4.90 4.90 45.60 3.06
2563 2975 5.512060 CGACATCAGGAATGATAGGGATGTT 60.512 44.000 0.00 0.00 43.69 2.71
2564 2976 5.874093 ACATCAGGAATGATAGGGATGTTC 58.126 41.667 0.00 0.00 41.68 3.18
2565 2977 5.610132 ACATCAGGAATGATAGGGATGTTCT 59.390 40.000 0.00 0.00 41.68 3.01
2566 2978 5.815233 TCAGGAATGATAGGGATGTTCTC 57.185 43.478 0.00 0.00 0.00 2.87
2567 2979 4.281941 TCAGGAATGATAGGGATGTTCTCG 59.718 45.833 0.00 0.00 0.00 4.04
2568 2980 3.007398 AGGAATGATAGGGATGTTCTCGC 59.993 47.826 0.00 0.00 37.09 5.03
2569 2981 3.244215 GGAATGATAGGGATGTTCTCGCA 60.244 47.826 0.00 0.00 39.23 5.10
2570 2982 4.380531 GAATGATAGGGATGTTCTCGCAA 58.619 43.478 0.00 0.00 39.23 4.85
2571 2983 3.904800 TGATAGGGATGTTCTCGCAAA 57.095 42.857 0.00 0.00 39.23 3.68
2572 2984 3.531538 TGATAGGGATGTTCTCGCAAAC 58.468 45.455 0.00 0.00 39.23 2.93
2573 2985 3.055458 TGATAGGGATGTTCTCGCAAACA 60.055 43.478 5.14 5.14 42.92 2.83
2574 2986 1.813513 AGGGATGTTCTCGCAAACAG 58.186 50.000 8.15 0.00 42.09 3.16
2575 2987 1.072331 AGGGATGTTCTCGCAAACAGT 59.928 47.619 8.15 0.00 42.09 3.55
2576 2988 1.880027 GGGATGTTCTCGCAAACAGTT 59.120 47.619 8.15 0.00 42.09 3.16
2577 2989 2.293399 GGGATGTTCTCGCAAACAGTTT 59.707 45.455 8.15 0.00 42.09 2.66
2578 2990 3.555518 GGATGTTCTCGCAAACAGTTTC 58.444 45.455 0.00 2.40 42.09 2.78
2579 2991 3.555518 GATGTTCTCGCAAACAGTTTCC 58.444 45.455 0.00 0.00 42.09 3.13
2580 2992 2.639065 TGTTCTCGCAAACAGTTTCCT 58.361 42.857 0.00 0.00 34.31 3.36
2581 2993 2.612212 TGTTCTCGCAAACAGTTTCCTC 59.388 45.455 0.00 0.00 34.31 3.71
2582 2994 2.612212 GTTCTCGCAAACAGTTTCCTCA 59.388 45.455 0.00 0.00 0.00 3.86
2583 2995 2.912771 TCTCGCAAACAGTTTCCTCAA 58.087 42.857 0.00 0.00 0.00 3.02
2584 2996 3.275143 TCTCGCAAACAGTTTCCTCAAA 58.725 40.909 0.00 0.00 0.00 2.69
2585 2997 3.692101 TCTCGCAAACAGTTTCCTCAAAA 59.308 39.130 0.00 0.00 0.00 2.44
2586 2998 4.338118 TCTCGCAAACAGTTTCCTCAAAAT 59.662 37.500 0.00 0.00 0.00 1.82
2587 2999 4.606961 TCGCAAACAGTTTCCTCAAAATC 58.393 39.130 0.00 0.00 0.00 2.17
2588 3000 3.735746 CGCAAACAGTTTCCTCAAAATCC 59.264 43.478 0.00 0.00 0.00 3.01
2589 3001 4.058124 GCAAACAGTTTCCTCAAAATCCC 58.942 43.478 0.00 0.00 0.00 3.85
2590 3002 4.442753 GCAAACAGTTTCCTCAAAATCCCA 60.443 41.667 0.00 0.00 0.00 4.37
2591 3003 5.669477 CAAACAGTTTCCTCAAAATCCCAA 58.331 37.500 0.00 0.00 0.00 4.12
2592 3004 6.290605 CAAACAGTTTCCTCAAAATCCCAAT 58.709 36.000 0.00 0.00 0.00 3.16
2593 3005 7.441017 CAAACAGTTTCCTCAAAATCCCAATA 58.559 34.615 0.00 0.00 0.00 1.90
2594 3006 6.840780 ACAGTTTCCTCAAAATCCCAATAG 57.159 37.500 0.00 0.00 0.00 1.73
2595 3007 6.552008 ACAGTTTCCTCAAAATCCCAATAGA 58.448 36.000 0.00 0.00 0.00 1.98
2596 3008 6.660949 ACAGTTTCCTCAAAATCCCAATAGAG 59.339 38.462 0.00 0.00 0.00 2.43
2597 3009 6.660949 CAGTTTCCTCAAAATCCCAATAGAGT 59.339 38.462 0.00 0.00 0.00 3.24
2598 3010 6.660949 AGTTTCCTCAAAATCCCAATAGAGTG 59.339 38.462 0.00 0.00 0.00 3.51
2599 3011 5.779241 TCCTCAAAATCCCAATAGAGTGT 57.221 39.130 0.00 0.00 0.00 3.55
2600 3012 5.745227 TCCTCAAAATCCCAATAGAGTGTC 58.255 41.667 0.00 0.00 0.00 3.67
2601 3013 5.250543 TCCTCAAAATCCCAATAGAGTGTCA 59.749 40.000 0.00 0.00 0.00 3.58
2602 3014 5.355350 CCTCAAAATCCCAATAGAGTGTCAC 59.645 44.000 0.00 0.00 0.00 3.67
2603 3015 5.875224 TCAAAATCCCAATAGAGTGTCACA 58.125 37.500 5.62 0.00 0.00 3.58
2604 3016 6.484288 TCAAAATCCCAATAGAGTGTCACAT 58.516 36.000 5.62 0.00 0.00 3.21
2605 3017 6.599244 TCAAAATCCCAATAGAGTGTCACATC 59.401 38.462 5.62 0.30 0.00 3.06
2606 3018 3.801114 TCCCAATAGAGTGTCACATCG 57.199 47.619 5.62 0.00 0.00 3.84
2607 3019 3.361786 TCCCAATAGAGTGTCACATCGA 58.638 45.455 5.62 0.00 0.00 3.59
2608 3020 3.960755 TCCCAATAGAGTGTCACATCGAT 59.039 43.478 5.62 0.00 0.00 3.59
2609 3021 4.038042 TCCCAATAGAGTGTCACATCGATC 59.962 45.833 5.62 0.00 0.00 3.69
2610 3022 4.038522 CCCAATAGAGTGTCACATCGATCT 59.961 45.833 5.62 1.43 0.00 2.75
2611 3023 5.452496 CCCAATAGAGTGTCACATCGATCTT 60.452 44.000 5.62 0.00 0.00 2.40
2612 3024 6.045318 CCAATAGAGTGTCACATCGATCTTT 58.955 40.000 5.62 0.00 0.00 2.52
2613 3025 7.203218 CCAATAGAGTGTCACATCGATCTTTA 58.797 38.462 5.62 0.00 0.00 1.85
2614 3026 7.706607 CCAATAGAGTGTCACATCGATCTTTAA 59.293 37.037 5.62 0.00 0.00 1.52
2615 3027 8.750416 CAATAGAGTGTCACATCGATCTTTAAG 58.250 37.037 5.62 0.00 0.00 1.85
2616 3028 6.516739 AGAGTGTCACATCGATCTTTAAGA 57.483 37.500 5.62 0.00 0.00 2.10
2617 3029 6.559810 AGAGTGTCACATCGATCTTTAAGAG 58.440 40.000 5.62 0.00 0.00 2.85
2618 3030 5.655488 AGTGTCACATCGATCTTTAAGAGG 58.345 41.667 5.62 0.00 0.00 3.69
2619 3031 5.419155 AGTGTCACATCGATCTTTAAGAGGA 59.581 40.000 5.62 1.10 0.00 3.71
2620 3032 5.746245 GTGTCACATCGATCTTTAAGAGGAG 59.254 44.000 0.00 0.00 0.00 3.69
2621 3033 4.742659 GTCACATCGATCTTTAAGAGGAGC 59.257 45.833 0.00 0.00 0.00 4.70
2622 3034 4.646945 TCACATCGATCTTTAAGAGGAGCT 59.353 41.667 0.00 0.00 0.00 4.09
2623 3035 4.981674 CACATCGATCTTTAAGAGGAGCTC 59.018 45.833 4.71 4.71 0.00 4.09
2624 3036 4.646945 ACATCGATCTTTAAGAGGAGCTCA 59.353 41.667 17.19 0.00 32.06 4.26
2625 3037 5.304101 ACATCGATCTTTAAGAGGAGCTCAT 59.696 40.000 17.19 8.81 32.06 2.90
2626 3038 5.193663 TCGATCTTTAAGAGGAGCTCATG 57.806 43.478 17.19 0.00 32.06 3.07
2627 3039 4.889995 TCGATCTTTAAGAGGAGCTCATGA 59.110 41.667 17.19 0.71 32.06 3.07
2628 3040 5.538053 TCGATCTTTAAGAGGAGCTCATGAT 59.462 40.000 17.19 6.19 32.06 2.45
2629 3041 5.863397 CGATCTTTAAGAGGAGCTCATGATC 59.137 44.000 17.19 13.93 32.06 2.92
2630 3042 6.516360 CGATCTTTAAGAGGAGCTCATGATCA 60.516 42.308 17.19 0.00 32.06 2.92
2631 3043 6.550938 TCTTTAAGAGGAGCTCATGATCAA 57.449 37.500 17.19 0.35 32.06 2.57
2632 3044 6.950842 TCTTTAAGAGGAGCTCATGATCAAA 58.049 36.000 17.19 7.18 32.06 2.69
2633 3045 7.046652 TCTTTAAGAGGAGCTCATGATCAAAG 58.953 38.462 17.19 15.58 32.06 2.77
2634 3046 3.842007 AGAGGAGCTCATGATCAAAGG 57.158 47.619 17.19 0.00 32.06 3.11
2635 3047 3.382278 AGAGGAGCTCATGATCAAAGGA 58.618 45.455 17.19 0.00 32.06 3.36
2636 3048 3.388676 AGAGGAGCTCATGATCAAAGGAG 59.611 47.826 17.19 14.65 32.06 3.69
2637 3049 2.438763 AGGAGCTCATGATCAAAGGAGG 59.561 50.000 17.19 6.22 0.00 4.30
2638 3050 2.437281 GGAGCTCATGATCAAAGGAGGA 59.563 50.000 17.19 3.58 0.00 3.71
2639 3051 3.118112 GGAGCTCATGATCAAAGGAGGAA 60.118 47.826 17.19 0.00 0.00 3.36
2640 3052 4.521146 GAGCTCATGATCAAAGGAGGAAA 58.479 43.478 9.40 0.00 0.00 3.13
2641 3053 5.126699 AGCTCATGATCAAAGGAGGAAAT 57.873 39.130 18.43 0.00 0.00 2.17
2642 3054 5.131784 AGCTCATGATCAAAGGAGGAAATC 58.868 41.667 18.43 6.67 0.00 2.17
2643 3055 5.104024 AGCTCATGATCAAAGGAGGAAATCT 60.104 40.000 18.43 8.25 0.00 2.40
2644 3056 5.593502 GCTCATGATCAAAGGAGGAAATCTT 59.406 40.000 18.43 0.00 0.00 2.40
2645 3057 6.769822 GCTCATGATCAAAGGAGGAAATCTTA 59.230 38.462 18.43 0.00 0.00 2.10
2646 3058 7.041235 GCTCATGATCAAAGGAGGAAATCTTAG 60.041 40.741 18.43 0.33 0.00 2.18
2647 3059 7.285566 TCATGATCAAAGGAGGAAATCTTAGG 58.714 38.462 0.00 0.00 0.00 2.69
2648 3060 6.006275 TGATCAAAGGAGGAAATCTTAGGG 57.994 41.667 0.00 0.00 0.00 3.53
2649 3061 5.731187 TGATCAAAGGAGGAAATCTTAGGGA 59.269 40.000 0.00 0.00 0.00 4.20
2650 3062 6.391055 TGATCAAAGGAGGAAATCTTAGGGAT 59.609 38.462 0.00 0.00 35.97 3.85
2651 3063 6.658555 TCAAAGGAGGAAATCTTAGGGATT 57.341 37.500 0.00 0.00 45.61 3.01
2652 3064 6.663734 TCAAAGGAGGAAATCTTAGGGATTC 58.336 40.000 0.00 0.00 43.17 2.52
2653 3065 5.654901 AAGGAGGAAATCTTAGGGATTCC 57.345 43.478 0.00 0.00 43.17 3.01
2654 3066 4.646157 AGGAGGAAATCTTAGGGATTCCA 58.354 43.478 4.80 0.00 43.17 3.53
2655 3067 5.238736 AGGAGGAAATCTTAGGGATTCCAT 58.761 41.667 4.80 0.00 43.17 3.41
2656 3068 5.074239 AGGAGGAAATCTTAGGGATTCCATG 59.926 44.000 4.80 0.00 43.17 3.66
2657 3069 5.320277 GAGGAAATCTTAGGGATTCCATGG 58.680 45.833 4.97 4.97 43.17 3.66
2658 3070 3.829026 GGAAATCTTAGGGATTCCATGGC 59.171 47.826 6.96 0.00 43.17 4.40
2659 3071 4.473444 GAAATCTTAGGGATTCCATGGCA 58.527 43.478 6.96 0.00 43.17 4.92
2660 3072 3.803186 ATCTTAGGGATTCCATGGCAG 57.197 47.619 6.96 0.00 34.83 4.85
2661 3073 2.775418 TCTTAGGGATTCCATGGCAGA 58.225 47.619 6.96 0.00 34.83 4.26
2662 3074 3.330198 TCTTAGGGATTCCATGGCAGAT 58.670 45.455 6.96 0.34 34.83 2.90
2663 3075 3.723681 TCTTAGGGATTCCATGGCAGATT 59.276 43.478 6.96 0.00 34.83 2.40
2664 3076 4.168675 TCTTAGGGATTCCATGGCAGATTT 59.831 41.667 6.96 0.00 34.83 2.17
2665 3077 2.674420 AGGGATTCCATGGCAGATTTG 58.326 47.619 6.96 0.00 34.83 2.32
2666 3078 1.690352 GGGATTCCATGGCAGATTTGG 59.310 52.381 6.96 0.00 0.00 3.28
2683 3095 4.740235 GCAGGAGCCGTCATAGAC 57.260 61.111 0.00 0.00 33.58 2.59
2684 3096 1.816537 GCAGGAGCCGTCATAGACA 59.183 57.895 0.00 0.00 31.07 3.41
2685 3097 0.175760 GCAGGAGCCGTCATAGACAA 59.824 55.000 0.00 0.00 31.07 3.18
2686 3098 1.405526 GCAGGAGCCGTCATAGACAAA 60.406 52.381 0.00 0.00 31.07 2.83
2687 3099 2.743183 GCAGGAGCCGTCATAGACAAAT 60.743 50.000 0.00 0.00 31.07 2.32
2688 3100 3.126831 CAGGAGCCGTCATAGACAAATC 58.873 50.000 0.00 0.00 32.09 2.17
2689 3101 3.034635 AGGAGCCGTCATAGACAAATCT 58.965 45.455 0.00 0.00 39.15 2.40
2690 3102 3.452627 AGGAGCCGTCATAGACAAATCTT 59.547 43.478 0.00 0.00 36.29 2.40
2691 3103 4.649674 AGGAGCCGTCATAGACAAATCTTA 59.350 41.667 0.00 0.00 36.29 2.10
2692 3104 4.745620 GGAGCCGTCATAGACAAATCTTAC 59.254 45.833 0.00 0.00 36.29 2.34
2693 3105 5.452077 GGAGCCGTCATAGACAAATCTTACT 60.452 44.000 0.00 0.00 36.29 2.24
2694 3106 5.978814 AGCCGTCATAGACAAATCTTACTT 58.021 37.500 0.00 0.00 36.29 2.24
2695 3107 5.812642 AGCCGTCATAGACAAATCTTACTTG 59.187 40.000 0.00 0.00 36.29 3.16
2696 3108 5.810587 GCCGTCATAGACAAATCTTACTTGA 59.189 40.000 0.00 0.00 36.29 3.02
2697 3109 6.019479 GCCGTCATAGACAAATCTTACTTGAG 60.019 42.308 0.00 0.00 36.29 3.02
2698 3110 7.036220 CCGTCATAGACAAATCTTACTTGAGT 58.964 38.462 0.00 0.00 36.29 3.41
2699 3111 8.188799 CCGTCATAGACAAATCTTACTTGAGTA 58.811 37.037 0.00 0.00 36.29 2.59
2700 3112 9.737427 CGTCATAGACAAATCTTACTTGAGTAT 57.263 33.333 0.00 0.00 36.29 2.12
2706 3118 9.646427 AGACAAATCTTACTTGAGTATGAAGTC 57.354 33.333 17.78 17.78 38.47 3.01
2707 3119 9.424319 GACAAATCTTACTTGAGTATGAAGTCA 57.576 33.333 19.02 0.00 38.47 3.41
2708 3120 9.950496 ACAAATCTTACTTGAGTATGAAGTCAT 57.050 29.630 9.82 0.00 38.47 3.06
2715 3127 7.913674 ACTTGAGTATGAAGTCATCTTTTCC 57.086 36.000 0.00 0.00 38.47 3.13
2716 3128 6.881602 ACTTGAGTATGAAGTCATCTTTTCCC 59.118 38.462 0.00 0.00 38.47 3.97
2717 3129 6.373005 TGAGTATGAAGTCATCTTTTCCCA 57.627 37.500 0.00 0.00 37.76 4.37
2718 3130 6.778821 TGAGTATGAAGTCATCTTTTCCCAA 58.221 36.000 0.00 0.00 37.76 4.12
2719 3131 6.881065 TGAGTATGAAGTCATCTTTTCCCAAG 59.119 38.462 0.00 0.00 37.76 3.61
2720 3132 6.183347 AGTATGAAGTCATCTTTTCCCAAGG 58.817 40.000 0.00 0.00 37.76 3.61
2721 3133 3.766545 TGAAGTCATCTTTTCCCAAGGG 58.233 45.455 0.00 0.00 33.64 3.95
2722 3134 3.140144 TGAAGTCATCTTTTCCCAAGGGT 59.860 43.478 4.80 0.00 33.64 4.34
2723 3135 3.441500 AGTCATCTTTTCCCAAGGGTC 57.558 47.619 4.80 0.00 36.47 4.46
2724 3136 2.989571 AGTCATCTTTTCCCAAGGGTCT 59.010 45.455 4.80 0.00 36.47 3.85
2725 3137 3.084786 GTCATCTTTTCCCAAGGGTCTG 58.915 50.000 4.80 0.00 36.47 3.51
2726 3138 1.821136 CATCTTTTCCCAAGGGTCTGC 59.179 52.381 4.80 0.00 36.47 4.26
2727 3139 0.850100 TCTTTTCCCAAGGGTCTGCA 59.150 50.000 4.80 0.00 36.47 4.41
2728 3140 1.428912 TCTTTTCCCAAGGGTCTGCAT 59.571 47.619 4.80 0.00 36.47 3.96
2729 3141 1.547372 CTTTTCCCAAGGGTCTGCATG 59.453 52.381 4.80 0.00 36.47 4.06
2730 3142 0.776810 TTTCCCAAGGGTCTGCATGA 59.223 50.000 4.80 0.00 36.47 3.07
2731 3143 0.038166 TTCCCAAGGGTCTGCATGAC 59.962 55.000 4.80 7.52 44.63 3.06
2732 3144 0.842030 TCCCAAGGGTCTGCATGACT 60.842 55.000 4.80 0.00 44.74 3.41
2733 3145 0.911769 CCCAAGGGTCTGCATGACTA 59.088 55.000 13.59 0.00 44.74 2.59
2734 3146 1.407437 CCCAAGGGTCTGCATGACTAC 60.407 57.143 13.59 8.78 44.74 2.73
2735 3147 1.556911 CCAAGGGTCTGCATGACTACT 59.443 52.381 13.59 10.33 44.74 2.57
2736 3148 2.625737 CAAGGGTCTGCATGACTACTG 58.374 52.381 13.59 6.84 44.74 2.74
2737 3149 1.198713 AGGGTCTGCATGACTACTGG 58.801 55.000 13.59 0.00 44.74 4.00
2738 3150 0.179000 GGGTCTGCATGACTACTGGG 59.821 60.000 13.59 0.00 44.74 4.45
2739 3151 1.195115 GGTCTGCATGACTACTGGGA 58.805 55.000 13.59 0.00 44.74 4.37
2740 3152 1.555075 GGTCTGCATGACTACTGGGAA 59.445 52.381 13.59 0.00 44.74 3.97
2741 3153 2.171448 GGTCTGCATGACTACTGGGAAT 59.829 50.000 13.59 0.00 44.74 3.01
2742 3154 3.201290 GTCTGCATGACTACTGGGAATG 58.799 50.000 0.00 0.00 42.21 2.67
2743 3155 2.171237 TCTGCATGACTACTGGGAATGG 59.829 50.000 0.00 0.00 0.00 3.16
2744 3156 2.171237 CTGCATGACTACTGGGAATGGA 59.829 50.000 0.00 0.00 0.00 3.41
2745 3157 2.575735 TGCATGACTACTGGGAATGGAA 59.424 45.455 0.00 0.00 0.00 3.53
2746 3158 3.209410 GCATGACTACTGGGAATGGAAG 58.791 50.000 0.00 0.00 0.00 3.46
2747 3159 3.209410 CATGACTACTGGGAATGGAAGC 58.791 50.000 0.00 0.00 0.00 3.86
2748 3160 1.559682 TGACTACTGGGAATGGAAGCC 59.440 52.381 0.00 0.00 0.00 4.35
2749 3161 0.541863 ACTACTGGGAATGGAAGCCG 59.458 55.000 0.00 0.00 0.00 5.52
2750 3162 0.815615 CTACTGGGAATGGAAGCCGC 60.816 60.000 0.00 0.00 0.00 6.53
2751 3163 1.271840 TACTGGGAATGGAAGCCGCT 61.272 55.000 0.00 0.00 0.00 5.52
2752 3164 1.379044 CTGGGAATGGAAGCCGCTT 60.379 57.895 4.98 4.98 0.00 4.68
2753 3165 0.967380 CTGGGAATGGAAGCCGCTTT 60.967 55.000 7.16 0.00 0.00 3.51
2754 3166 0.965363 TGGGAATGGAAGCCGCTTTC 60.965 55.000 7.16 5.66 0.00 2.62
2755 3167 1.667154 GGGAATGGAAGCCGCTTTCC 61.667 60.000 9.01 10.52 45.59 3.13
2756 3168 1.667154 GGAATGGAAGCCGCTTTCCC 61.667 60.000 9.01 6.44 44.93 3.97
2757 3169 0.681243 GAATGGAAGCCGCTTTCCCT 60.681 55.000 9.01 1.99 44.93 4.20
2758 3170 0.251787 AATGGAAGCCGCTTTCCCTT 60.252 50.000 9.01 7.42 44.93 3.95
2759 3171 0.967380 ATGGAAGCCGCTTTCCCTTG 60.967 55.000 9.01 0.00 44.93 3.61
2760 3172 1.303317 GGAAGCCGCTTTCCCTTGA 60.303 57.895 7.16 0.00 40.64 3.02
2761 3173 0.893727 GGAAGCCGCTTTCCCTTGAA 60.894 55.000 7.16 0.00 40.64 2.69
2762 3174 0.241213 GAAGCCGCTTTCCCTTGAAC 59.759 55.000 7.16 0.00 0.00 3.18
2763 3175 0.467290 AAGCCGCTTTCCCTTGAACA 60.467 50.000 0.00 0.00 0.00 3.18
2764 3176 0.251341 AGCCGCTTTCCCTTGAACAT 60.251 50.000 0.00 0.00 0.00 2.71
2765 3177 0.171231 GCCGCTTTCCCTTGAACATC 59.829 55.000 0.00 0.00 0.00 3.06
2766 3178 1.826385 CCGCTTTCCCTTGAACATCT 58.174 50.000 0.00 0.00 0.00 2.90
2767 3179 1.470098 CCGCTTTCCCTTGAACATCTG 59.530 52.381 0.00 0.00 0.00 2.90
2768 3180 2.426522 CGCTTTCCCTTGAACATCTGA 58.573 47.619 0.00 0.00 0.00 3.27
2769 3181 2.813754 CGCTTTCCCTTGAACATCTGAA 59.186 45.455 0.00 0.00 0.00 3.02
2770 3182 3.253188 CGCTTTCCCTTGAACATCTGAAA 59.747 43.478 0.00 0.00 0.00 2.69
2771 3183 4.082571 CGCTTTCCCTTGAACATCTGAAAT 60.083 41.667 0.00 0.00 0.00 2.17
2772 3184 5.123820 CGCTTTCCCTTGAACATCTGAAATA 59.876 40.000 0.00 0.00 0.00 1.40
2773 3185 6.183360 CGCTTTCCCTTGAACATCTGAAATAT 60.183 38.462 0.00 0.00 0.00 1.28
2774 3186 6.976925 GCTTTCCCTTGAACATCTGAAATATG 59.023 38.462 0.00 0.00 0.00 1.78
2775 3187 6.455360 TTCCCTTGAACATCTGAAATATGC 57.545 37.500 0.00 0.00 0.00 3.14
2776 3188 4.576053 TCCCTTGAACATCTGAAATATGCG 59.424 41.667 0.00 0.00 0.00 4.73
2777 3189 4.261322 CCCTTGAACATCTGAAATATGCGG 60.261 45.833 0.00 0.00 0.00 5.69
2778 3190 3.969117 TGAACATCTGAAATATGCGGC 57.031 42.857 0.00 0.00 0.00 6.53
2779 3191 3.277715 TGAACATCTGAAATATGCGGCA 58.722 40.909 4.58 4.58 0.00 5.69
2780 3192 3.693578 TGAACATCTGAAATATGCGGCAA 59.306 39.130 6.82 0.00 0.00 4.52
2781 3193 4.338964 TGAACATCTGAAATATGCGGCAAT 59.661 37.500 6.82 0.00 0.00 3.56
2782 3194 4.924305 ACATCTGAAATATGCGGCAATT 57.076 36.364 6.82 5.70 0.00 2.32
2783 3195 4.613944 ACATCTGAAATATGCGGCAATTG 58.386 39.130 6.82 0.00 0.00 2.32
2784 3196 4.098349 ACATCTGAAATATGCGGCAATTGT 59.902 37.500 6.82 0.00 0.00 2.71
2785 3197 5.299028 ACATCTGAAATATGCGGCAATTGTA 59.701 36.000 6.82 0.00 0.00 2.41
2786 3198 5.826601 TCTGAAATATGCGGCAATTGTAA 57.173 34.783 6.82 0.00 0.00 2.41
2787 3199 5.820131 TCTGAAATATGCGGCAATTGTAAG 58.180 37.500 6.82 1.72 0.00 2.34
2788 3200 5.356751 TCTGAAATATGCGGCAATTGTAAGT 59.643 36.000 6.82 0.00 0.00 2.24
2789 3201 5.339177 TGAAATATGCGGCAATTGTAAGTG 58.661 37.500 6.82 0.00 0.00 3.16
2790 3202 5.124617 TGAAATATGCGGCAATTGTAAGTGA 59.875 36.000 6.82 0.00 0.00 3.41
2791 3203 5.574891 AATATGCGGCAATTGTAAGTGAA 57.425 34.783 6.82 0.00 0.00 3.18
2792 3204 3.932545 ATGCGGCAATTGTAAGTGAAA 57.067 38.095 6.82 0.00 0.00 2.69
2793 3205 3.717400 TGCGGCAATTGTAAGTGAAAA 57.283 38.095 7.40 0.00 0.00 2.29
2794 3206 3.376540 TGCGGCAATTGTAAGTGAAAAC 58.623 40.909 7.40 0.00 0.00 2.43
2795 3207 3.067461 TGCGGCAATTGTAAGTGAAAACT 59.933 39.130 7.40 0.00 0.00 2.66
2796 3208 4.048504 GCGGCAATTGTAAGTGAAAACTT 58.951 39.130 7.40 0.00 0.00 2.66
2797 3209 4.148174 GCGGCAATTGTAAGTGAAAACTTC 59.852 41.667 7.40 0.00 0.00 3.01
2798 3210 5.277825 CGGCAATTGTAAGTGAAAACTTCA 58.722 37.500 7.40 0.00 37.33 3.02
2799 3211 5.746245 CGGCAATTGTAAGTGAAAACTTCAA 59.254 36.000 7.40 1.28 42.15 2.69
2800 3212 6.254589 CGGCAATTGTAAGTGAAAACTTCAAA 59.745 34.615 7.40 0.00 42.15 2.69
2801 3213 7.201478 CGGCAATTGTAAGTGAAAACTTCAAAA 60.201 33.333 7.40 0.00 42.15 2.44
2802 3214 8.447053 GGCAATTGTAAGTGAAAACTTCAAAAA 58.553 29.630 7.40 0.00 42.15 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.130118 GTGTGGATAGTCTTGCCATAAGG 58.870 47.826 0.00 0.00 33.66 2.69
11 12 4.130118 GGTGTGGATAGTCTTGCCATAAG 58.870 47.826 0.00 0.00 33.66 1.73
12 13 3.118038 GGGTGTGGATAGTCTTGCCATAA 60.118 47.826 0.00 0.00 33.66 1.90
13 14 2.438021 GGGTGTGGATAGTCTTGCCATA 59.562 50.000 0.00 0.00 33.66 2.74
14 15 1.212935 GGGTGTGGATAGTCTTGCCAT 59.787 52.381 0.00 0.00 33.66 4.40
15 16 0.618458 GGGTGTGGATAGTCTTGCCA 59.382 55.000 0.00 0.00 0.00 4.92
16 17 0.618458 TGGGTGTGGATAGTCTTGCC 59.382 55.000 0.00 0.00 0.00 4.52
17 18 1.003118 TGTGGGTGTGGATAGTCTTGC 59.997 52.381 0.00 0.00 0.00 4.01
18 19 2.038426 TGTGTGGGTGTGGATAGTCTTG 59.962 50.000 0.00 0.00 0.00 3.02
19 20 2.334977 TGTGTGGGTGTGGATAGTCTT 58.665 47.619 0.00 0.00 0.00 3.01
20 21 2.024176 TGTGTGGGTGTGGATAGTCT 57.976 50.000 0.00 0.00 0.00 3.24
21 22 2.038557 AGTTGTGTGGGTGTGGATAGTC 59.961 50.000 0.00 0.00 0.00 2.59
22 23 2.054799 AGTTGTGTGGGTGTGGATAGT 58.945 47.619 0.00 0.00 0.00 2.12
23 24 2.813754 CAAGTTGTGTGGGTGTGGATAG 59.186 50.000 0.00 0.00 0.00 2.08
24 25 2.173782 ACAAGTTGTGTGGGTGTGGATA 59.826 45.455 7.96 0.00 39.72 2.59
25 26 1.064017 ACAAGTTGTGTGGGTGTGGAT 60.064 47.619 7.96 0.00 39.72 3.41
26 27 0.329931 ACAAGTTGTGTGGGTGTGGA 59.670 50.000 7.96 0.00 39.72 4.02
27 28 1.946768 CTACAAGTTGTGTGGGTGTGG 59.053 52.381 18.90 0.00 41.89 4.17
28 29 2.872245 CTCTACAAGTTGTGTGGGTGTG 59.128 50.000 18.90 0.00 41.89 3.82
29 30 2.504175 ACTCTACAAGTTGTGTGGGTGT 59.496 45.455 18.90 9.54 41.89 4.16
30 31 3.194005 ACTCTACAAGTTGTGTGGGTG 57.806 47.619 18.90 9.00 41.89 4.61
31 32 5.512576 GGAATACTCTACAAGTTGTGTGGGT 60.513 44.000 18.90 17.63 41.89 4.51
32 33 4.935808 GGAATACTCTACAAGTTGTGTGGG 59.064 45.833 18.90 13.01 41.89 4.61
33 34 5.547465 TGGAATACTCTACAAGTTGTGTGG 58.453 41.667 18.90 9.98 41.89 4.17
34 35 6.706270 AGTTGGAATACTCTACAAGTTGTGTG 59.294 38.462 18.90 11.05 41.89 3.82
35 36 6.827727 AGTTGGAATACTCTACAAGTTGTGT 58.172 36.000 18.90 10.40 44.82 3.72
36 37 7.657761 AGAAGTTGGAATACTCTACAAGTTGTG 59.342 37.037 18.90 8.69 39.55 3.33
37 38 7.657761 CAGAAGTTGGAATACTCTACAAGTTGT 59.342 37.037 14.05 14.05 39.55 3.32
38 39 8.023050 CAGAAGTTGGAATACTCTACAAGTTG 57.977 38.462 0.00 0.00 39.55 3.16
55 56 4.796038 AGAAATTGGCATCCAGAAGTTG 57.204 40.909 0.00 0.00 33.81 3.16
56 57 4.221482 GGAAGAAATTGGCATCCAGAAGTT 59.779 41.667 0.00 0.00 33.81 2.66
57 58 3.766051 GGAAGAAATTGGCATCCAGAAGT 59.234 43.478 0.00 0.00 33.81 3.01
58 59 3.765511 TGGAAGAAATTGGCATCCAGAAG 59.234 43.478 1.18 0.00 35.33 2.85
59 60 3.511146 GTGGAAGAAATTGGCATCCAGAA 59.489 43.478 5.52 0.00 40.65 3.02
60 61 3.091545 GTGGAAGAAATTGGCATCCAGA 58.908 45.455 5.52 0.00 40.65 3.86
61 62 3.094572 AGTGGAAGAAATTGGCATCCAG 58.905 45.455 5.52 0.00 40.65 3.86
62 63 3.173953 AGTGGAAGAAATTGGCATCCA 57.826 42.857 1.18 1.18 37.83 3.41
63 64 4.248058 CAAAGTGGAAGAAATTGGCATCC 58.752 43.478 0.00 0.00 0.00 3.51
64 65 4.886579 ACAAAGTGGAAGAAATTGGCATC 58.113 39.130 0.00 0.00 0.00 3.91
65 66 4.961438 ACAAAGTGGAAGAAATTGGCAT 57.039 36.364 0.00 0.00 0.00 4.40
66 67 4.751767 AACAAAGTGGAAGAAATTGGCA 57.248 36.364 0.00 0.00 0.00 4.92
67 68 6.512297 TCTAAACAAAGTGGAAGAAATTGGC 58.488 36.000 0.00 0.00 0.00 4.52
73 74 9.959721 AGCTTATATCTAAACAAAGTGGAAGAA 57.040 29.630 0.00 0.00 0.00 2.52
74 75 9.959721 AAGCTTATATCTAAACAAAGTGGAAGA 57.040 29.630 0.00 0.00 0.00 2.87
75 76 9.994432 CAAGCTTATATCTAAACAAAGTGGAAG 57.006 33.333 0.00 0.00 0.00 3.46
76 77 9.733556 TCAAGCTTATATCTAAACAAAGTGGAA 57.266 29.630 0.00 0.00 0.00 3.53
77 78 9.733556 TTCAAGCTTATATCTAAACAAAGTGGA 57.266 29.630 0.00 0.00 0.00 4.02
78 79 9.994432 CTTCAAGCTTATATCTAAACAAAGTGG 57.006 33.333 0.00 0.00 0.00 4.00
100 101 9.416284 GGGGTCCTAATGTAAAATTTATCTTCA 57.584 33.333 0.00 0.00 0.00 3.02
101 102 8.857098 GGGGGTCCTAATGTAAAATTTATCTTC 58.143 37.037 0.00 0.00 0.00 2.87
102 103 8.777578 GGGGGTCCTAATGTAAAATTTATCTT 57.222 34.615 0.00 0.00 0.00 2.40
126 127 7.939588 TGGTTTGTAATTTTATTTTCTTGGGGG 59.060 33.333 0.00 0.00 0.00 5.40
127 128 8.910351 TGGTTTGTAATTTTATTTTCTTGGGG 57.090 30.769 0.00 0.00 0.00 4.96
128 129 9.554395 ACTGGTTTGTAATTTTATTTTCTTGGG 57.446 29.630 0.00 0.00 0.00 4.12
142 143 9.357161 TGTAAAATGTTAGGACTGGTTTGTAAT 57.643 29.630 0.00 0.00 0.00 1.89
143 144 8.749026 TGTAAAATGTTAGGACTGGTTTGTAA 57.251 30.769 0.00 0.00 0.00 2.41
144 145 8.749026 TTGTAAAATGTTAGGACTGGTTTGTA 57.251 30.769 0.00 0.00 0.00 2.41
145 146 7.648039 TTGTAAAATGTTAGGACTGGTTTGT 57.352 32.000 0.00 0.00 0.00 2.83
146 147 8.934507 TTTTGTAAAATGTTAGGACTGGTTTG 57.065 30.769 0.00 0.00 0.00 2.93
147 148 9.594478 CTTTTTGTAAAATGTTAGGACTGGTTT 57.406 29.630 0.00 0.00 0.00 3.27
148 149 8.201464 CCTTTTTGTAAAATGTTAGGACTGGTT 58.799 33.333 1.16 0.00 28.21 3.67
149 150 7.685884 GCCTTTTTGTAAAATGTTAGGACTGGT 60.686 37.037 8.86 0.00 28.21 4.00
150 151 6.645003 GCCTTTTTGTAAAATGTTAGGACTGG 59.355 38.462 8.86 0.00 28.21 4.00
151 152 6.645003 GGCCTTTTTGTAAAATGTTAGGACTG 59.355 38.462 0.00 0.00 30.78 3.51
152 153 6.553476 AGGCCTTTTTGTAAAATGTTAGGACT 59.447 34.615 0.00 7.71 36.28 3.85
153 154 6.755206 AGGCCTTTTTGTAAAATGTTAGGAC 58.245 36.000 0.00 6.53 32.66 3.85
154 155 6.987403 AGGCCTTTTTGTAAAATGTTAGGA 57.013 33.333 0.00 0.00 28.21 2.94
155 156 8.581578 TCTTAGGCCTTTTTGTAAAATGTTAGG 58.418 33.333 12.58 2.59 0.00 2.69
158 159 8.646900 TGATCTTAGGCCTTTTTGTAAAATGTT 58.353 29.630 12.58 0.00 0.00 2.71
159 160 8.189119 TGATCTTAGGCCTTTTTGTAAAATGT 57.811 30.769 12.58 0.00 0.00 2.71
160 161 9.090692 CATGATCTTAGGCCTTTTTGTAAAATG 57.909 33.333 12.58 1.02 0.00 2.32
161 162 8.260114 CCATGATCTTAGGCCTTTTTGTAAAAT 58.740 33.333 12.58 0.00 0.00 1.82
162 163 7.234577 ACCATGATCTTAGGCCTTTTTGTAAAA 59.765 33.333 12.58 0.00 0.00 1.52
163 164 6.723977 ACCATGATCTTAGGCCTTTTTGTAAA 59.276 34.615 12.58 0.00 0.00 2.01
164 165 6.152661 CACCATGATCTTAGGCCTTTTTGTAA 59.847 38.462 12.58 0.00 0.00 2.41
165 166 5.652014 CACCATGATCTTAGGCCTTTTTGTA 59.348 40.000 12.58 0.00 0.00 2.41
166 167 4.463891 CACCATGATCTTAGGCCTTTTTGT 59.536 41.667 12.58 0.00 0.00 2.83
167 168 4.678840 GCACCATGATCTTAGGCCTTTTTG 60.679 45.833 12.58 0.00 0.00 2.44
168 169 3.448660 GCACCATGATCTTAGGCCTTTTT 59.551 43.478 12.58 0.00 0.00 1.94
169 170 3.026694 GCACCATGATCTTAGGCCTTTT 58.973 45.455 12.58 0.00 0.00 2.27
170 171 2.025037 TGCACCATGATCTTAGGCCTTT 60.025 45.455 12.58 0.00 0.00 3.11
171 172 1.565759 TGCACCATGATCTTAGGCCTT 59.434 47.619 12.58 0.00 0.00 4.35
172 173 1.216064 TGCACCATGATCTTAGGCCT 58.784 50.000 11.78 11.78 0.00 5.19
173 174 1.678101 GTTGCACCATGATCTTAGGCC 59.322 52.381 0.00 0.00 0.00 5.19
174 175 1.331756 CGTTGCACCATGATCTTAGGC 59.668 52.381 0.00 0.00 0.00 3.93
175 176 2.632377 ACGTTGCACCATGATCTTAGG 58.368 47.619 0.00 0.00 0.00 2.69
176 177 4.007282 CAACGTTGCACCATGATCTTAG 57.993 45.455 16.51 0.00 0.00 2.18
178 179 2.995466 CAACGTTGCACCATGATCTT 57.005 45.000 16.51 0.00 0.00 2.40
190 191 2.335320 CGTCGATTGAATTGCAACGTTG 59.665 45.455 23.90 23.90 39.78 4.10
191 192 2.570169 CGTCGATTGAATTGCAACGTT 58.430 42.857 0.00 0.00 39.78 3.99
192 193 1.136085 CCGTCGATTGAATTGCAACGT 60.136 47.619 0.00 0.00 39.78 3.99
193 194 1.523501 CCGTCGATTGAATTGCAACG 58.476 50.000 0.00 0.00 39.78 4.10
194 195 1.467374 CCCCGTCGATTGAATTGCAAC 60.467 52.381 0.00 0.00 39.78 4.17
195 196 0.808125 CCCCGTCGATTGAATTGCAA 59.192 50.000 0.00 0.00 41.53 4.08
196 197 1.029408 CCCCCGTCGATTGAATTGCA 61.029 55.000 0.00 0.00 0.00 4.08
197 198 1.727467 CCCCCGTCGATTGAATTGC 59.273 57.895 0.00 0.00 0.00 3.56
198 199 1.727467 GCCCCCGTCGATTGAATTG 59.273 57.895 0.00 0.00 0.00 2.32
199 200 1.817941 CGCCCCCGTCGATTGAATT 60.818 57.895 0.00 0.00 0.00 2.17
200 201 2.203015 CGCCCCCGTCGATTGAAT 60.203 61.111 0.00 0.00 0.00 2.57
201 202 2.451928 TTTCGCCCCCGTCGATTGAA 62.452 55.000 0.00 0.00 35.75 2.69
202 203 2.945161 TTTCGCCCCCGTCGATTGA 61.945 57.895 0.00 0.00 35.75 2.57
203 204 2.435234 TTTCGCCCCCGTCGATTG 60.435 61.111 0.00 0.00 35.75 2.67
204 205 2.435410 GTTTCGCCCCCGTCGATT 60.435 61.111 0.00 0.00 35.75 3.34
205 206 4.462280 GGTTTCGCCCCCGTCGAT 62.462 66.667 0.00 0.00 35.75 3.59
207 208 4.770874 ATGGTTTCGCCCCCGTCG 62.771 66.667 0.00 0.00 36.04 5.12
208 209 2.360726 AATGGTTTCGCCCCCGTC 60.361 61.111 0.00 0.00 36.04 4.79
209 210 2.675075 CAATGGTTTCGCCCCCGT 60.675 61.111 0.00 0.00 36.04 5.28
210 211 3.448340 CCAATGGTTTCGCCCCCG 61.448 66.667 0.00 0.00 36.04 5.73
211 212 3.770040 GCCAATGGTTTCGCCCCC 61.770 66.667 0.00 0.00 36.04 5.40
212 213 2.994417 TGCCAATGGTTTCGCCCC 60.994 61.111 0.00 0.00 36.04 5.80
213 214 2.261361 GTGCCAATGGTTTCGCCC 59.739 61.111 0.00 0.00 36.04 6.13
214 215 1.933115 ATCGTGCCAATGGTTTCGCC 61.933 55.000 0.00 0.00 37.90 5.54
215 216 0.798009 CATCGTGCCAATGGTTTCGC 60.798 55.000 0.00 0.00 0.00 4.70
216 217 0.179166 CCATCGTGCCAATGGTTTCG 60.179 55.000 0.00 3.95 39.11 3.46
240 241 4.007644 CGGTGCTGGAGCTGTGGA 62.008 66.667 0.00 0.00 42.66 4.02
250 251 3.499737 GGCAATCCGTCGGTGCTG 61.500 66.667 21.95 13.92 38.36 4.41
255 256 4.776322 TGCCTGGCAATCCGTCGG 62.776 66.667 21.08 4.39 34.76 4.79
256 257 3.197790 CTGCCTGGCAATCCGTCG 61.198 66.667 23.51 5.06 38.41 5.12
257 258 1.372087 CTTCTGCCTGGCAATCCGTC 61.372 60.000 23.51 0.00 38.41 4.79
258 259 1.377725 CTTCTGCCTGGCAATCCGT 60.378 57.895 23.51 0.00 38.41 4.69
262 263 1.272872 ACAATCCTTCTGCCTGGCAAT 60.273 47.619 23.51 9.98 38.41 3.56
278 279 4.408921 TGGGATCAGGTCGATTTCTACAAT 59.591 41.667 0.00 0.00 33.17 2.71
287 288 1.407437 GCAGTTTGGGATCAGGTCGAT 60.407 52.381 0.00 0.00 36.91 3.59
292 293 4.722193 ACGCAGTTTGGGATCAGG 57.278 55.556 0.00 0.00 37.78 3.86
307 308 1.435577 CCTACGAACAAAAGGGGACG 58.564 55.000 0.00 0.00 0.00 4.79
308 309 1.162698 GCCTACGAACAAAAGGGGAC 58.837 55.000 0.00 0.00 0.00 4.46
357 360 1.569479 GCACTTGGAACTCTCGGTGC 61.569 60.000 0.00 0.00 42.04 5.01
362 365 1.016653 GGCGAGCACTTGGAACTCTC 61.017 60.000 0.00 0.00 0.00 3.20
364 367 0.603975 AAGGCGAGCACTTGGAACTC 60.604 55.000 0.00 0.00 0.00 3.01
365 368 0.179018 AAAGGCGAGCACTTGGAACT 60.179 50.000 0.00 0.00 0.00 3.01
379 382 4.082026 ACCTGCATATTCTGTTCAAAAGGC 60.082 41.667 0.00 0.00 0.00 4.35
380 383 5.644644 GACCTGCATATTCTGTTCAAAAGG 58.355 41.667 0.00 0.00 0.00 3.11
405 408 4.626081 ACACACCTGGACGGCAGC 62.626 66.667 0.00 0.00 35.61 5.25
406 409 2.357517 GACACACCTGGACGGCAG 60.358 66.667 0.00 0.00 35.61 4.85
443 461 1.675219 GACACCAAAGCCTACCGGA 59.325 57.895 9.46 0.00 0.00 5.14
449 467 1.002134 CCATCGGACACCAAAGCCT 60.002 57.895 0.00 0.00 0.00 4.58
487 505 8.482128 TCCAAATACTCCAAAGAACACAAAAAT 58.518 29.630 0.00 0.00 0.00 1.82
492 510 5.070001 CCTCCAAATACTCCAAAGAACACA 58.930 41.667 0.00 0.00 0.00 3.72
545 563 4.217767 AGTCCGCGATCTACATAGCAAATA 59.782 41.667 8.23 0.00 30.28 1.40
568 586 5.375417 TCGATGTAGGTCAAAAGACGTTA 57.625 39.130 0.00 0.00 0.00 3.18
569 587 4.247267 TCGATGTAGGTCAAAAGACGTT 57.753 40.909 0.00 0.00 0.00 3.99
577 595 3.179443 GAAGCCATCGATGTAGGTCAA 57.821 47.619 23.27 0.00 0.00 3.18
598 616 1.298859 CTTGTAGAAGTGGTGGCCGC 61.299 60.000 8.12 8.12 0.00 6.53
624 642 6.183360 TGGGCCGAAGTAAACTTGTTTAAAAT 60.183 34.615 7.43 0.00 36.11 1.82
625 643 5.126707 TGGGCCGAAGTAAACTTGTTTAAAA 59.873 36.000 7.43 0.00 36.11 1.52
683 712 0.032515 TCTTCCTCCTGTATCCGCCA 60.033 55.000 0.00 0.00 0.00 5.69
684 713 1.001406 CATCTTCCTCCTGTATCCGCC 59.999 57.143 0.00 0.00 0.00 6.13
686 715 3.226777 AGTCATCTTCCTCCTGTATCCG 58.773 50.000 0.00 0.00 0.00 4.18
687 716 5.208463 GAAGTCATCTTCCTCCTGTATCC 57.792 47.826 0.00 0.00 42.85 2.59
703 733 2.364324 ACTCTTAGTTGTGCGGAAGTCA 59.636 45.455 0.00 0.00 0.00 3.41
709 739 4.870426 ACATCATAACTCTTAGTTGTGCGG 59.130 41.667 10.60 8.07 43.98 5.69
710 740 7.520119 TTACATCATAACTCTTAGTTGTGCG 57.480 36.000 10.60 7.56 43.98 5.34
726 756 7.614192 ACCCTTACGGAAAAGAAATTACATCAT 59.386 33.333 0.00 0.00 34.64 2.45
744 775 6.849588 AGTACTTACAAACAAACCCTTACG 57.150 37.500 0.00 0.00 0.00 3.18
838 869 6.353404 TGTGGTGATTAGATGTGTCTTACA 57.647 37.500 0.00 0.00 44.87 2.41
845 876 6.018751 CGTAGGAAATGTGGTGATTAGATGTG 60.019 42.308 0.00 0.00 0.00 3.21
855 887 2.482721 GGTGTTCGTAGGAAATGTGGTG 59.517 50.000 0.00 0.00 33.05 4.17
869 901 0.859232 CGGAGTTGTTCTGGTGTTCG 59.141 55.000 0.00 0.00 0.00 3.95
884 916 5.289595 TCGACATCATTTAATTCTCCGGAG 58.710 41.667 26.32 26.32 0.00 4.63
886 918 5.984233 TTCGACATCATTTAATTCTCCGG 57.016 39.130 0.00 0.00 0.00 5.14
889 925 7.243487 TGTGCTTTCGACATCATTTAATTCTC 58.757 34.615 0.00 0.00 0.00 2.87
891 927 7.975866 ATGTGCTTTCGACATCATTTAATTC 57.024 32.000 0.00 0.00 27.16 2.17
956 992 3.440173 CCAGGATTTTCGTACATGCTGTT 59.560 43.478 8.45 0.00 37.19 3.16
959 995 3.350219 ACCAGGATTTTCGTACATGCT 57.650 42.857 0.00 0.00 0.00 3.79
961 997 6.542370 AGGAATAACCAGGATTTTCGTACATG 59.458 38.462 0.00 0.00 42.04 3.21
967 1003 6.354130 TCCTTAGGAATAACCAGGATTTTCG 58.646 40.000 0.00 0.00 36.37 3.46
969 1005 7.347252 GTCTCCTTAGGAATAACCAGGATTTT 58.653 38.462 1.41 0.00 39.25 1.82
977 1013 4.159135 TGTGACGTCTCCTTAGGAATAACC 59.841 45.833 17.92 0.00 39.35 2.85
1002 1038 3.871594 GGTAACATCTGTAGTGATGCACC 59.128 47.826 10.82 10.82 45.51 5.01
1061 1111 6.626623 GCGAACACAAGACCCCGTATATATAT 60.627 42.308 0.00 0.00 0.00 0.86
1242 1293 2.813908 GACATGGCGTCGTGGGTC 60.814 66.667 14.75 0.00 34.19 4.46
1485 1536 3.528370 GCCTCCTCGAGCCGCTTA 61.528 66.667 6.99 0.00 0.00 3.09
1740 1791 2.971598 CGCCACCAATCCTCCCAGT 61.972 63.158 0.00 0.00 0.00 4.00
1794 1845 9.662947 CAAGCCATATATCAATCTGAATGAGTA 57.337 33.333 1.53 0.00 0.00 2.59
1835 1886 0.753479 TTCAAGCTTCACCCGCCAAA 60.753 50.000 0.00 0.00 0.00 3.28
1864 1920 4.392940 AGAAGAAGAGAAACACACCCATG 58.607 43.478 0.00 0.00 0.00 3.66
2009 2065 1.321743 CATGACACGAGCGTTAGAAGC 59.678 52.381 0.00 0.00 0.00 3.86
2022 2078 2.800544 ACGTGACAGCTTTACATGACAC 59.199 45.455 0.00 3.24 38.27 3.67
2038 2094 4.077108 ACCTTGTATGACTACTCACGTGA 58.923 43.478 18.88 18.88 0.00 4.35
2050 2106 5.607939 ACCATGTCGAATACCTTGTATGA 57.392 39.130 0.00 0.00 0.00 2.15
2051 2107 8.922676 GTTATACCATGTCGAATACCTTGTATG 58.077 37.037 0.00 0.00 0.00 2.39
2380 2792 8.807667 ATGTGTGTTTTTGAAAATTGCAAAAA 57.192 23.077 17.95 17.95 46.78 1.94
2430 2842 8.597167 TGCTCCATTATCACTGCTACTAATAAT 58.403 33.333 0.00 0.00 0.00 1.28
2443 2855 4.572389 ACACTCGAATTGCTCCATTATCAC 59.428 41.667 0.00 0.00 0.00 3.06
2455 2867 2.350772 GCAACCTGGAACACTCGAATTG 60.351 50.000 0.00 0.00 0.00 2.32
2456 2868 1.880027 GCAACCTGGAACACTCGAATT 59.120 47.619 0.00 0.00 0.00 2.17
2460 2872 2.954753 GCGCAACCTGGAACACTCG 61.955 63.158 0.30 0.00 0.00 4.18
2483 2895 1.153349 CCTTTAGGGGAGCGCACTC 60.153 63.158 11.47 1.84 42.66 3.51
2484 2896 0.983378 ATCCTTTAGGGGAGCGCACT 60.983 55.000 11.47 4.52 38.92 4.40
2485 2897 0.107165 AATCCTTTAGGGGAGCGCAC 60.107 55.000 11.47 1.97 38.92 5.34
2486 2898 0.623723 AAATCCTTTAGGGGAGCGCA 59.376 50.000 11.47 0.00 38.92 6.09
2487 2899 1.309950 GAAATCCTTTAGGGGAGCGC 58.690 55.000 0.00 0.00 38.92 5.92
2488 2900 1.490910 AGGAAATCCTTTAGGGGAGCG 59.509 52.381 0.00 0.00 46.09 5.03
2507 2919 5.352643 AAAACGATACCTTTGTTCCGAAG 57.647 39.130 0.00 0.00 30.19 3.79
2508 2920 4.084433 CGAAAACGATACCTTTGTTCCGAA 60.084 41.667 0.00 0.00 30.19 4.30
2509 2921 3.429543 CGAAAACGATACCTTTGTTCCGA 59.570 43.478 0.00 0.00 30.19 4.55
2510 2922 3.728600 CGAAAACGATACCTTTGTTCCG 58.271 45.455 0.00 0.00 30.19 4.30
2511 2923 3.187842 AGCGAAAACGATACCTTTGTTCC 59.812 43.478 0.00 0.00 30.19 3.62
2512 2924 4.400036 AGCGAAAACGATACCTTTGTTC 57.600 40.909 0.00 0.00 30.19 3.18
2513 2925 4.992951 ACTAGCGAAAACGATACCTTTGTT 59.007 37.500 0.00 0.00 33.04 2.83
2514 2926 4.387862 CACTAGCGAAAACGATACCTTTGT 59.612 41.667 0.00 0.00 0.00 2.83
2515 2927 4.387862 ACACTAGCGAAAACGATACCTTTG 59.612 41.667 0.00 0.00 0.00 2.77
2516 2928 4.563061 ACACTAGCGAAAACGATACCTTT 58.437 39.130 0.00 0.00 0.00 3.11
2517 2929 4.171754 GACACTAGCGAAAACGATACCTT 58.828 43.478 0.00 0.00 0.00 3.50
2518 2930 3.730061 CGACACTAGCGAAAACGATACCT 60.730 47.826 0.00 0.00 0.00 3.08
2519 2931 2.529090 CGACACTAGCGAAAACGATACC 59.471 50.000 0.00 0.00 0.00 2.73
2520 2932 3.236980 GTCGACACTAGCGAAAACGATAC 59.763 47.826 11.55 0.00 39.73 2.24
2521 2933 3.120234 TGTCGACACTAGCGAAAACGATA 60.120 43.478 15.76 0.00 39.73 2.92
2522 2934 2.248487 GTCGACACTAGCGAAAACGAT 58.752 47.619 11.55 0.00 39.73 3.73
2523 2935 1.002576 TGTCGACACTAGCGAAAACGA 60.003 47.619 15.76 0.00 39.73 3.85
2524 2936 1.401530 TGTCGACACTAGCGAAAACG 58.598 50.000 15.76 0.00 39.73 3.60
2525 2937 2.984471 TGATGTCGACACTAGCGAAAAC 59.016 45.455 22.71 3.28 39.73 2.43
2526 2938 3.242518 CTGATGTCGACACTAGCGAAAA 58.757 45.455 22.71 0.00 39.73 2.29
2527 2939 2.415491 CCTGATGTCGACACTAGCGAAA 60.415 50.000 22.71 0.00 39.73 3.46
2528 2940 1.132453 CCTGATGTCGACACTAGCGAA 59.868 52.381 22.71 0.00 39.73 4.70
2529 2941 0.733150 CCTGATGTCGACACTAGCGA 59.267 55.000 22.71 0.00 35.08 4.93
2530 2942 0.733150 TCCTGATGTCGACACTAGCG 59.267 55.000 22.71 14.62 0.00 4.26
2531 2943 2.941453 TTCCTGATGTCGACACTAGC 57.059 50.000 22.71 11.22 0.00 3.42
2532 2944 4.639135 TCATTCCTGATGTCGACACTAG 57.361 45.455 22.71 20.40 37.06 2.57
2533 2945 5.241728 CCTATCATTCCTGATGTCGACACTA 59.758 44.000 22.71 11.86 42.19 2.74
2534 2946 4.038522 CCTATCATTCCTGATGTCGACACT 59.961 45.833 22.71 10.33 42.19 3.55
2535 2947 4.302455 CCTATCATTCCTGATGTCGACAC 58.698 47.826 22.71 15.11 42.19 3.67
2536 2948 3.321968 CCCTATCATTCCTGATGTCGACA 59.678 47.826 22.48 22.48 42.19 4.35
2537 2949 3.574396 TCCCTATCATTCCTGATGTCGAC 59.426 47.826 9.11 9.11 42.19 4.20
2538 2950 3.844640 TCCCTATCATTCCTGATGTCGA 58.155 45.455 0.00 0.00 42.19 4.20
2539 2951 4.020751 ACATCCCTATCATTCCTGATGTCG 60.021 45.833 0.00 0.00 42.19 4.35
2540 2952 5.495926 ACATCCCTATCATTCCTGATGTC 57.504 43.478 0.00 0.00 42.19 3.06
2541 2953 5.610132 AGAACATCCCTATCATTCCTGATGT 59.390 40.000 0.00 0.00 42.19 3.06
2542 2954 6.124316 AGAACATCCCTATCATTCCTGATG 57.876 41.667 0.00 0.00 42.19 3.07
2543 2955 5.046735 CGAGAACATCCCTATCATTCCTGAT 60.047 44.000 0.00 0.00 44.39 2.90
2544 2956 4.281941 CGAGAACATCCCTATCATTCCTGA 59.718 45.833 0.00 0.00 35.41 3.86
2545 2957 4.564041 CGAGAACATCCCTATCATTCCTG 58.436 47.826 0.00 0.00 0.00 3.86
2546 2958 3.007398 GCGAGAACATCCCTATCATTCCT 59.993 47.826 0.00 0.00 0.00 3.36
2547 2959 3.244215 TGCGAGAACATCCCTATCATTCC 60.244 47.826 0.00 0.00 0.00 3.01
2548 2960 3.995199 TGCGAGAACATCCCTATCATTC 58.005 45.455 0.00 0.00 0.00 2.67
2549 2961 4.422073 TTGCGAGAACATCCCTATCATT 57.578 40.909 0.00 0.00 0.00 2.57
2550 2962 4.130118 GTTTGCGAGAACATCCCTATCAT 58.870 43.478 0.00 0.00 0.00 2.45
2551 2963 3.055458 TGTTTGCGAGAACATCCCTATCA 60.055 43.478 0.57 0.00 34.77 2.15
2552 2964 3.531538 TGTTTGCGAGAACATCCCTATC 58.468 45.455 0.57 0.00 34.77 2.08
2553 2965 3.055094 ACTGTTTGCGAGAACATCCCTAT 60.055 43.478 4.78 0.00 38.71 2.57
2554 2966 2.301870 ACTGTTTGCGAGAACATCCCTA 59.698 45.455 4.78 0.00 38.71 3.53
2555 2967 1.072331 ACTGTTTGCGAGAACATCCCT 59.928 47.619 4.78 0.00 38.71 4.20
2556 2968 1.523758 ACTGTTTGCGAGAACATCCC 58.476 50.000 4.78 0.00 38.71 3.85
2557 2969 3.555518 GAAACTGTTTGCGAGAACATCC 58.444 45.455 11.03 0.00 38.71 3.51
2558 2970 3.251004 AGGAAACTGTTTGCGAGAACATC 59.749 43.478 17.23 0.00 41.13 3.06
2559 2971 3.214328 AGGAAACTGTTTGCGAGAACAT 58.786 40.909 17.23 0.00 41.13 2.71
2560 2972 2.612212 GAGGAAACTGTTTGCGAGAACA 59.388 45.455 17.23 4.34 44.43 3.18
2561 2973 2.612212 TGAGGAAACTGTTTGCGAGAAC 59.388 45.455 17.23 9.46 44.43 3.01
2562 2974 2.912771 TGAGGAAACTGTTTGCGAGAA 58.087 42.857 17.23 3.98 44.43 2.87
2563 2975 2.613026 TGAGGAAACTGTTTGCGAGA 57.387 45.000 17.23 4.63 44.43 4.04
2564 2976 3.691049 TTTGAGGAAACTGTTTGCGAG 57.309 42.857 17.23 0.00 44.43 5.03
2565 2977 4.499019 GGATTTTGAGGAAACTGTTTGCGA 60.499 41.667 17.23 7.18 44.43 5.10
2566 2978 3.735746 GGATTTTGAGGAAACTGTTTGCG 59.264 43.478 17.23 0.00 44.43 4.85
2567 2979 4.058124 GGGATTTTGAGGAAACTGTTTGC 58.942 43.478 15.83 15.83 44.43 3.68
2568 2980 5.275067 TGGGATTTTGAGGAAACTGTTTG 57.725 39.130 11.03 0.00 44.43 2.93
2569 2981 5.948742 TTGGGATTTTGAGGAAACTGTTT 57.051 34.783 5.29 5.29 44.43 2.83
2570 2982 7.010160 TCTATTGGGATTTTGAGGAAACTGTT 58.990 34.615 0.00 0.00 44.43 3.16
2571 2983 6.552008 TCTATTGGGATTTTGAGGAAACTGT 58.448 36.000 0.00 0.00 44.43 3.55
2572 2984 6.660949 ACTCTATTGGGATTTTGAGGAAACTG 59.339 38.462 0.00 0.00 44.43 3.16
2574 2986 6.434340 ACACTCTATTGGGATTTTGAGGAAAC 59.566 38.462 0.00 0.00 0.00 2.78
2575 2987 6.552008 ACACTCTATTGGGATTTTGAGGAAA 58.448 36.000 0.00 0.00 0.00 3.13
2576 2988 6.139679 ACACTCTATTGGGATTTTGAGGAA 57.860 37.500 0.00 0.00 0.00 3.36
2577 2989 5.250543 TGACACTCTATTGGGATTTTGAGGA 59.749 40.000 0.00 0.00 0.00 3.71
2578 2990 5.355350 GTGACACTCTATTGGGATTTTGAGG 59.645 44.000 0.00 0.00 0.00 3.86
2579 2991 5.939883 TGTGACACTCTATTGGGATTTTGAG 59.060 40.000 7.20 0.00 0.00 3.02
2580 2992 5.875224 TGTGACACTCTATTGGGATTTTGA 58.125 37.500 7.20 0.00 0.00 2.69
2581 2993 6.457392 CGATGTGACACTCTATTGGGATTTTG 60.457 42.308 7.20 0.00 0.00 2.44
2582 2994 5.586243 CGATGTGACACTCTATTGGGATTTT 59.414 40.000 7.20 0.00 0.00 1.82
2583 2995 5.104941 TCGATGTGACACTCTATTGGGATTT 60.105 40.000 7.20 0.00 0.00 2.17
2584 2996 4.405680 TCGATGTGACACTCTATTGGGATT 59.594 41.667 7.20 0.00 0.00 3.01
2585 2997 3.960755 TCGATGTGACACTCTATTGGGAT 59.039 43.478 7.20 0.00 0.00 3.85
2586 2998 3.361786 TCGATGTGACACTCTATTGGGA 58.638 45.455 7.20 0.00 0.00 4.37
2587 2999 3.801114 TCGATGTGACACTCTATTGGG 57.199 47.619 7.20 0.00 0.00 4.12
2588 3000 5.193663 AGATCGATGTGACACTCTATTGG 57.806 43.478 0.54 0.00 0.00 3.16
2589 3001 8.634475 TTAAAGATCGATGTGACACTCTATTG 57.366 34.615 0.54 0.00 0.00 1.90
2590 3002 8.687242 TCTTAAAGATCGATGTGACACTCTATT 58.313 33.333 0.54 0.00 0.00 1.73
2591 3003 8.226819 TCTTAAAGATCGATGTGACACTCTAT 57.773 34.615 0.54 0.19 0.00 1.98
2592 3004 7.201741 CCTCTTAAAGATCGATGTGACACTCTA 60.202 40.741 0.54 0.00 0.00 2.43
2593 3005 6.405286 CCTCTTAAAGATCGATGTGACACTCT 60.405 42.308 0.54 0.00 0.00 3.24
2594 3006 5.746245 CCTCTTAAAGATCGATGTGACACTC 59.254 44.000 0.54 1.43 0.00 3.51
2595 3007 5.419155 TCCTCTTAAAGATCGATGTGACACT 59.581 40.000 0.54 0.00 0.00 3.55
2596 3008 5.651530 TCCTCTTAAAGATCGATGTGACAC 58.348 41.667 0.54 0.00 0.00 3.67
2597 3009 5.679894 GCTCCTCTTAAAGATCGATGTGACA 60.680 44.000 0.54 0.00 0.00 3.58
2598 3010 4.742659 GCTCCTCTTAAAGATCGATGTGAC 59.257 45.833 0.54 0.00 0.00 3.67
2599 3011 4.646945 AGCTCCTCTTAAAGATCGATGTGA 59.353 41.667 0.54 0.00 0.00 3.58
2600 3012 4.942852 AGCTCCTCTTAAAGATCGATGTG 58.057 43.478 0.54 0.00 0.00 3.21
2601 3013 4.646945 TGAGCTCCTCTTAAAGATCGATGT 59.353 41.667 12.15 0.00 30.59 3.06
2602 3014 5.193663 TGAGCTCCTCTTAAAGATCGATG 57.806 43.478 12.15 0.00 30.59 3.84
2603 3015 5.538053 TCATGAGCTCCTCTTAAAGATCGAT 59.462 40.000 12.15 0.00 30.59 3.59
2604 3016 4.889995 TCATGAGCTCCTCTTAAAGATCGA 59.110 41.667 12.15 0.00 30.59 3.59
2605 3017 5.193663 TCATGAGCTCCTCTTAAAGATCG 57.806 43.478 12.15 0.00 30.59 3.69
2606 3018 6.757237 TGATCATGAGCTCCTCTTAAAGATC 58.243 40.000 12.92 9.18 0.00 2.75
2607 3019 6.744175 TGATCATGAGCTCCTCTTAAAGAT 57.256 37.500 12.92 0.00 0.00 2.40
2608 3020 6.550938 TTGATCATGAGCTCCTCTTAAAGA 57.449 37.500 12.92 0.00 0.00 2.52
2609 3021 6.260493 CCTTTGATCATGAGCTCCTCTTAAAG 59.740 42.308 12.92 10.86 0.00 1.85
2610 3022 6.070021 TCCTTTGATCATGAGCTCCTCTTAAA 60.070 38.462 12.92 1.65 0.00 1.52
2611 3023 5.426509 TCCTTTGATCATGAGCTCCTCTTAA 59.573 40.000 12.92 0.00 0.00 1.85
2612 3024 4.964897 TCCTTTGATCATGAGCTCCTCTTA 59.035 41.667 12.92 0.00 0.00 2.10
2613 3025 3.779183 TCCTTTGATCATGAGCTCCTCTT 59.221 43.478 12.92 0.00 0.00 2.85
2614 3026 3.382278 TCCTTTGATCATGAGCTCCTCT 58.618 45.455 12.92 0.00 0.00 3.69
2615 3027 3.494749 CCTCCTTTGATCATGAGCTCCTC 60.495 52.174 12.92 3.61 0.00 3.71
2616 3028 2.438763 CCTCCTTTGATCATGAGCTCCT 59.561 50.000 12.92 0.00 0.00 3.69
2617 3029 2.437281 TCCTCCTTTGATCATGAGCTCC 59.563 50.000 12.92 0.00 0.00 4.70
2618 3030 3.834489 TCCTCCTTTGATCATGAGCTC 57.166 47.619 12.92 6.82 0.00 4.09
2619 3031 4.581309 TTTCCTCCTTTGATCATGAGCT 57.419 40.909 12.92 0.00 0.00 4.09
2620 3032 5.131784 AGATTTCCTCCTTTGATCATGAGC 58.868 41.667 3.40 3.40 0.00 4.26
2621 3033 7.444792 CCTAAGATTTCCTCCTTTGATCATGAG 59.555 40.741 0.09 3.40 0.00 2.90
2622 3034 7.285566 CCTAAGATTTCCTCCTTTGATCATGA 58.714 38.462 0.00 0.00 0.00 3.07
2623 3035 6.489361 CCCTAAGATTTCCTCCTTTGATCATG 59.511 42.308 0.00 0.00 0.00 3.07
2624 3036 6.391055 TCCCTAAGATTTCCTCCTTTGATCAT 59.609 38.462 0.00 0.00 0.00 2.45
2625 3037 5.731187 TCCCTAAGATTTCCTCCTTTGATCA 59.269 40.000 0.00 0.00 0.00 2.92
2626 3038 6.253946 TCCCTAAGATTTCCTCCTTTGATC 57.746 41.667 0.00 0.00 0.00 2.92
2627 3039 6.855375 ATCCCTAAGATTTCCTCCTTTGAT 57.145 37.500 0.00 0.00 0.00 2.57
2628 3040 6.353951 GGAATCCCTAAGATTTCCTCCTTTGA 60.354 42.308 0.00 0.00 45.52 2.69
2629 3041 5.830457 GGAATCCCTAAGATTTCCTCCTTTG 59.170 44.000 0.00 0.00 45.52 2.77
2630 3042 5.496168 TGGAATCCCTAAGATTTCCTCCTTT 59.504 40.000 0.00 0.00 45.52 3.11
2631 3043 5.046522 TGGAATCCCTAAGATTTCCTCCTT 58.953 41.667 0.00 0.00 45.52 3.36
2632 3044 4.646157 TGGAATCCCTAAGATTTCCTCCT 58.354 43.478 0.00 0.00 45.52 3.69
2633 3045 5.320277 CATGGAATCCCTAAGATTTCCTCC 58.680 45.833 0.00 0.00 45.52 4.30
2634 3046 5.320277 CCATGGAATCCCTAAGATTTCCTC 58.680 45.833 5.56 0.00 45.52 3.71
2635 3047 4.448347 GCCATGGAATCCCTAAGATTTCCT 60.448 45.833 18.40 0.00 45.52 3.36
2636 3048 3.829026 GCCATGGAATCCCTAAGATTTCC 59.171 47.826 18.40 0.00 45.52 3.13
2637 3049 4.473444 TGCCATGGAATCCCTAAGATTTC 58.527 43.478 18.40 0.00 45.52 2.17
2638 3050 4.168675 TCTGCCATGGAATCCCTAAGATTT 59.831 41.667 18.40 0.00 45.52 2.17
2640 3052 3.330198 TCTGCCATGGAATCCCTAAGAT 58.670 45.455 18.40 0.00 36.48 2.40
2641 3053 2.775418 TCTGCCATGGAATCCCTAAGA 58.225 47.619 18.40 0.00 0.00 2.10
2642 3054 3.803186 ATCTGCCATGGAATCCCTAAG 57.197 47.619 18.40 0.00 0.00 2.18
2643 3055 4.217510 CAAATCTGCCATGGAATCCCTAA 58.782 43.478 18.40 0.00 0.00 2.69
2644 3056 3.436906 CCAAATCTGCCATGGAATCCCTA 60.437 47.826 18.40 0.00 36.27 3.53
2645 3057 2.674420 CAAATCTGCCATGGAATCCCT 58.326 47.619 18.40 0.00 0.00 4.20
2646 3058 1.690352 CCAAATCTGCCATGGAATCCC 59.310 52.381 18.40 0.00 36.27 3.85
2647 3059 1.069668 GCCAAATCTGCCATGGAATCC 59.930 52.381 18.40 0.00 36.27 3.01
2648 3060 1.758280 TGCCAAATCTGCCATGGAATC 59.242 47.619 18.40 0.00 36.27 2.52
2649 3061 1.760613 CTGCCAAATCTGCCATGGAAT 59.239 47.619 18.40 2.00 36.27 3.01
2650 3062 1.187974 CTGCCAAATCTGCCATGGAA 58.812 50.000 18.40 3.09 36.27 3.53
2651 3063 0.685131 CCTGCCAAATCTGCCATGGA 60.685 55.000 18.40 0.00 36.27 3.41
2652 3064 0.685131 TCCTGCCAAATCTGCCATGG 60.685 55.000 7.63 7.63 37.29 3.66
2653 3065 0.744874 CTCCTGCCAAATCTGCCATG 59.255 55.000 0.00 0.00 0.00 3.66
2654 3066 1.041447 GCTCCTGCCAAATCTGCCAT 61.041 55.000 0.00 0.00 0.00 4.40
2655 3067 1.679977 GCTCCTGCCAAATCTGCCA 60.680 57.895 0.00 0.00 0.00 4.92
2656 3068 3.204418 GCTCCTGCCAAATCTGCC 58.796 61.111 0.00 0.00 0.00 4.85
2666 3078 0.175760 TTGTCTATGACGGCTCCTGC 59.824 55.000 0.00 0.00 34.95 4.85
2667 3079 2.672961 TTTGTCTATGACGGCTCCTG 57.327 50.000 0.00 0.00 34.95 3.86
2668 3080 3.034635 AGATTTGTCTATGACGGCTCCT 58.965 45.455 0.00 0.00 34.95 3.69
2669 3081 3.460857 AGATTTGTCTATGACGGCTCC 57.539 47.619 0.00 0.00 34.95 4.70
2670 3082 5.593010 AGTAAGATTTGTCTATGACGGCTC 58.407 41.667 0.00 0.00 34.95 4.70
2671 3083 5.599999 AGTAAGATTTGTCTATGACGGCT 57.400 39.130 0.00 0.00 34.95 5.52
2672 3084 5.810587 TCAAGTAAGATTTGTCTATGACGGC 59.189 40.000 0.00 0.00 34.95 5.68
2673 3085 7.036220 ACTCAAGTAAGATTTGTCTATGACGG 58.964 38.462 0.00 0.00 34.95 4.79
2674 3086 9.737427 ATACTCAAGTAAGATTTGTCTATGACG 57.263 33.333 0.00 0.00 32.87 4.35
2680 3092 9.646427 GACTTCATACTCAAGTAAGATTTGTCT 57.354 33.333 0.00 0.00 34.10 3.41
2681 3093 9.424319 TGACTTCATACTCAAGTAAGATTTGTC 57.576 33.333 11.96 11.96 34.10 3.18
2682 3094 9.950496 ATGACTTCATACTCAAGTAAGATTTGT 57.050 29.630 0.00 0.00 34.10 2.83
2689 3101 9.436957 GGAAAAGATGACTTCATACTCAAGTAA 57.563 33.333 0.00 0.00 36.57 2.24
2690 3102 8.041323 GGGAAAAGATGACTTCATACTCAAGTA 58.959 37.037 0.00 0.00 36.57 2.24
2691 3103 6.881602 GGGAAAAGATGACTTCATACTCAAGT 59.118 38.462 0.00 0.00 36.57 3.16
2692 3104 6.881065 TGGGAAAAGATGACTTCATACTCAAG 59.119 38.462 0.00 0.00 36.57 3.02
2693 3105 6.778821 TGGGAAAAGATGACTTCATACTCAA 58.221 36.000 0.00 0.00 36.57 3.02
2694 3106 6.373005 TGGGAAAAGATGACTTCATACTCA 57.627 37.500 0.00 0.00 36.57 3.41
2695 3107 6.317391 CCTTGGGAAAAGATGACTTCATACTC 59.683 42.308 0.00 0.00 36.57 2.59
2696 3108 6.183347 CCTTGGGAAAAGATGACTTCATACT 58.817 40.000 0.00 0.00 36.57 2.12
2697 3109 5.358160 CCCTTGGGAAAAGATGACTTCATAC 59.642 44.000 0.00 0.00 36.57 2.39
2698 3110 5.015178 ACCCTTGGGAAAAGATGACTTCATA 59.985 40.000 13.39 0.00 36.57 2.15
2699 3111 4.202716 ACCCTTGGGAAAAGATGACTTCAT 60.203 41.667 13.39 0.00 39.70 2.57
2700 3112 3.140144 ACCCTTGGGAAAAGATGACTTCA 59.860 43.478 13.39 0.00 35.05 3.02
2701 3113 3.759086 GACCCTTGGGAAAAGATGACTTC 59.241 47.826 13.39 0.00 35.05 3.01
2702 3114 3.399305 AGACCCTTGGGAAAAGATGACTT 59.601 43.478 13.39 0.00 38.05 3.01
2703 3115 2.989571 AGACCCTTGGGAAAAGATGACT 59.010 45.455 13.39 0.00 0.00 3.41
2704 3116 3.084786 CAGACCCTTGGGAAAAGATGAC 58.915 50.000 13.39 0.00 0.00 3.06
2705 3117 2.555227 GCAGACCCTTGGGAAAAGATGA 60.555 50.000 13.39 0.00 0.00 2.92
2706 3118 1.821136 GCAGACCCTTGGGAAAAGATG 59.179 52.381 13.39 3.06 0.00 2.90
2707 3119 1.428912 TGCAGACCCTTGGGAAAAGAT 59.571 47.619 13.39 0.00 0.00 2.40
2708 3120 0.850100 TGCAGACCCTTGGGAAAAGA 59.150 50.000 13.39 0.00 0.00 2.52
2709 3121 1.547372 CATGCAGACCCTTGGGAAAAG 59.453 52.381 13.39 0.73 0.00 2.27
2710 3122 1.146774 TCATGCAGACCCTTGGGAAAA 59.853 47.619 13.39 0.00 0.00 2.29
2711 3123 0.776810 TCATGCAGACCCTTGGGAAA 59.223 50.000 13.39 0.00 0.00 3.13
2712 3124 0.038166 GTCATGCAGACCCTTGGGAA 59.962 55.000 13.39 0.00 41.56 3.97
2713 3125 1.685224 GTCATGCAGACCCTTGGGA 59.315 57.895 13.39 0.00 41.56 4.37
2714 3126 4.326255 GTCATGCAGACCCTTGGG 57.674 61.111 3.77 3.77 41.56 4.12
2722 3134 2.171237 CCATTCCCAGTAGTCATGCAGA 59.829 50.000 0.00 0.00 0.00 4.26
2723 3135 2.171237 TCCATTCCCAGTAGTCATGCAG 59.829 50.000 0.00 0.00 0.00 4.41
2724 3136 2.195727 TCCATTCCCAGTAGTCATGCA 58.804 47.619 0.00 0.00 0.00 3.96
2725 3137 3.209410 CTTCCATTCCCAGTAGTCATGC 58.791 50.000 0.00 0.00 0.00 4.06
2726 3138 3.209410 GCTTCCATTCCCAGTAGTCATG 58.791 50.000 0.00 0.00 0.00 3.07
2727 3139 2.173569 GGCTTCCATTCCCAGTAGTCAT 59.826 50.000 0.00 0.00 0.00 3.06
2728 3140 1.559682 GGCTTCCATTCCCAGTAGTCA 59.440 52.381 0.00 0.00 0.00 3.41
2729 3141 1.473434 CGGCTTCCATTCCCAGTAGTC 60.473 57.143 0.00 0.00 0.00 2.59
2730 3142 0.541863 CGGCTTCCATTCCCAGTAGT 59.458 55.000 0.00 0.00 0.00 2.73
2731 3143 0.815615 GCGGCTTCCATTCCCAGTAG 60.816 60.000 0.00 0.00 0.00 2.57
2732 3144 1.223487 GCGGCTTCCATTCCCAGTA 59.777 57.895 0.00 0.00 0.00 2.74
2733 3145 2.044946 GCGGCTTCCATTCCCAGT 60.045 61.111 0.00 0.00 0.00 4.00
2734 3146 0.967380 AAAGCGGCTTCCATTCCCAG 60.967 55.000 16.70 0.00 0.00 4.45
2735 3147 0.965363 GAAAGCGGCTTCCATTCCCA 60.965 55.000 16.70 0.00 0.00 4.37
2736 3148 1.667154 GGAAAGCGGCTTCCATTCCC 61.667 60.000 16.70 7.02 43.84 3.97
2737 3149 1.667154 GGGAAAGCGGCTTCCATTCC 61.667 60.000 16.70 17.84 45.86 3.01
2738 3150 0.681243 AGGGAAAGCGGCTTCCATTC 60.681 55.000 16.70 9.56 45.86 2.67
2739 3151 0.251787 AAGGGAAAGCGGCTTCCATT 60.252 50.000 16.70 17.91 45.86 3.16
2740 3152 0.967380 CAAGGGAAAGCGGCTTCCAT 60.967 55.000 16.70 13.25 45.86 3.41
2741 3153 1.603455 CAAGGGAAAGCGGCTTCCA 60.603 57.895 16.70 0.00 45.86 3.53
2742 3154 0.893727 TTCAAGGGAAAGCGGCTTCC 60.894 55.000 16.70 17.22 43.69 3.46
2743 3155 0.241213 GTTCAAGGGAAAGCGGCTTC 59.759 55.000 16.70 9.39 34.13 3.86
2744 3156 0.467290 TGTTCAAGGGAAAGCGGCTT 60.467 50.000 9.94 9.94 34.13 4.35
2745 3157 0.251341 ATGTTCAAGGGAAAGCGGCT 60.251 50.000 0.00 0.00 34.13 5.52
2746 3158 0.171231 GATGTTCAAGGGAAAGCGGC 59.829 55.000 0.00 0.00 34.13 6.53
2747 3159 1.470098 CAGATGTTCAAGGGAAAGCGG 59.530 52.381 0.00 0.00 34.13 5.52
2748 3160 2.426522 TCAGATGTTCAAGGGAAAGCG 58.573 47.619 0.00 0.00 34.13 4.68
2749 3161 4.853924 TTTCAGATGTTCAAGGGAAAGC 57.146 40.909 0.00 0.00 34.13 3.51
2750 3162 6.976925 GCATATTTCAGATGTTCAAGGGAAAG 59.023 38.462 0.00 0.00 34.13 2.62
2751 3163 6.404623 CGCATATTTCAGATGTTCAAGGGAAA 60.405 38.462 0.00 0.00 34.13 3.13
2752 3164 5.066375 CGCATATTTCAGATGTTCAAGGGAA 59.934 40.000 0.00 0.00 0.00 3.97
2753 3165 4.576053 CGCATATTTCAGATGTTCAAGGGA 59.424 41.667 0.00 0.00 0.00 4.20
2754 3166 4.261322 CCGCATATTTCAGATGTTCAAGGG 60.261 45.833 0.00 0.00 0.00 3.95
2755 3167 4.790766 GCCGCATATTTCAGATGTTCAAGG 60.791 45.833 0.00 0.00 0.00 3.61
2756 3168 4.201940 TGCCGCATATTTCAGATGTTCAAG 60.202 41.667 0.00 0.00 0.00 3.02
2757 3169 3.693578 TGCCGCATATTTCAGATGTTCAA 59.306 39.130 0.00 0.00 0.00 2.69
2758 3170 3.277715 TGCCGCATATTTCAGATGTTCA 58.722 40.909 0.00 0.00 0.00 3.18
2759 3171 3.969117 TGCCGCATATTTCAGATGTTC 57.031 42.857 0.00 0.00 0.00 3.18
2760 3172 4.924305 ATTGCCGCATATTTCAGATGTT 57.076 36.364 0.00 0.00 0.00 2.71
2761 3173 4.098349 ACAATTGCCGCATATTTCAGATGT 59.902 37.500 5.05 0.00 0.00 3.06
2762 3174 4.613944 ACAATTGCCGCATATTTCAGATG 58.386 39.130 5.05 0.00 0.00 2.90
2763 3175 4.924305 ACAATTGCCGCATATTTCAGAT 57.076 36.364 5.05 0.00 0.00 2.90
2764 3176 5.356751 ACTTACAATTGCCGCATATTTCAGA 59.643 36.000 5.05 0.00 0.00 3.27
2765 3177 5.456497 CACTTACAATTGCCGCATATTTCAG 59.544 40.000 5.05 0.00 0.00 3.02
2766 3178 5.124617 TCACTTACAATTGCCGCATATTTCA 59.875 36.000 5.05 0.00 0.00 2.69
2767 3179 5.577835 TCACTTACAATTGCCGCATATTTC 58.422 37.500 5.05 0.00 0.00 2.17
2768 3180 5.574891 TCACTTACAATTGCCGCATATTT 57.425 34.783 5.05 0.00 0.00 1.40
2769 3181 5.574891 TTCACTTACAATTGCCGCATATT 57.425 34.783 5.05 0.00 0.00 1.28
2770 3182 5.574891 TTTCACTTACAATTGCCGCATAT 57.425 34.783 5.05 0.00 0.00 1.78
2771 3183 5.048364 AGTTTTCACTTACAATTGCCGCATA 60.048 36.000 5.05 0.00 0.00 3.14
2772 3184 3.932545 TTTCACTTACAATTGCCGCAT 57.067 38.095 5.05 0.00 0.00 4.73
2773 3185 3.067461 AGTTTTCACTTACAATTGCCGCA 59.933 39.130 5.05 0.00 0.00 5.69
2774 3186 3.638484 AGTTTTCACTTACAATTGCCGC 58.362 40.909 5.05 0.00 0.00 6.53
2775 3187 5.277825 TGAAGTTTTCACTTACAATTGCCG 58.722 37.500 5.05 0.00 43.79 5.69
2776 3188 7.532682 TTTGAAGTTTTCACTTACAATTGCC 57.467 32.000 5.05 0.00 43.79 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.