Multiple sequence alignment - TraesCS4B01G106100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G106100 chr4B 100.000 2020 0 0 1 2020 115551123 115549104 0.000000e+00 3731.0
1 TraesCS4B01G106100 chr4B 100.000 108 0 0 2328 2435 115548796 115548689 1.480000e-47 200.0
2 TraesCS4B01G106100 chr4B 97.222 108 3 0 2328 2435 660150277 660150170 1.490000e-42 183.0
3 TraesCS4B01G106100 chr4B 95.745 94 3 1 778 871 167393827 167393919 1.510000e-32 150.0
4 TraesCS4B01G106100 chr4B 95.062 81 3 1 1940 2020 660150381 660150302 2.540000e-25 126.0
5 TraesCS4B01G106100 chr4A 89.256 484 34 10 1304 1781 491709817 491709346 7.500000e-165 590.0
6 TraesCS4B01G106100 chr4A 90.176 397 21 6 867 1263 491710203 491709825 3.610000e-138 501.0
7 TraesCS4B01G106100 chr4A 84.086 421 38 19 5 406 491711228 491710818 1.770000e-101 379.0
8 TraesCS4B01G106100 chr4A 89.447 199 9 4 588 775 491710430 491710233 8.700000e-60 241.0
9 TraesCS4B01G106100 chr4A 94.792 96 4 1 778 872 716820969 716820874 5.420000e-32 148.0
10 TraesCS4B01G106100 chr4A 91.509 106 5 4 780 883 586386238 586386341 2.520000e-30 143.0
11 TraesCS4B01G106100 chr4A 81.081 185 21 9 400 572 491710596 491710414 4.220000e-28 135.0
12 TraesCS4B01G106100 chr4D 91.443 409 21 5 866 1263 81914112 81913707 1.270000e-152 549.0
13 TraesCS4B01G106100 chr4D 92.523 321 21 3 1301 1620 81913702 81913384 7.940000e-125 457.0
14 TraesCS4B01G106100 chr4D 87.229 415 35 8 76 478 81915479 81915071 7.940000e-125 457.0
15 TraesCS4B01G106100 chr4D 90.452 199 7 4 588 775 81914327 81914130 4.020000e-63 252.0
16 TraesCS4B01G106100 chr5A 96.296 108 4 0 2328 2435 376533938 376534045 6.920000e-41 178.0
17 TraesCS4B01G106100 chr5B 95.327 107 5 0 2328 2434 68415060 68415166 1.160000e-38 171.0
18 TraesCS4B01G106100 chr5B 94.340 106 6 0 2329 2434 604577182 604577287 1.940000e-36 163.0
19 TraesCS4B01G106100 chr5B 89.908 109 8 3 761 868 50350308 50350202 1.170000e-28 137.0
20 TraesCS4B01G106100 chr1D 95.283 106 5 0 2328 2433 485495074 485494969 4.160000e-38 169.0
21 TraesCS4B01G106100 chr1D 92.593 108 8 0 2328 2435 64752301 64752194 3.240000e-34 156.0
22 TraesCS4B01G106100 chr1D 93.617 47 3 0 1820 1866 464311746 464311700 1.210000e-08 71.3
23 TraesCS4B01G106100 chr5D 94.444 108 6 0 2328 2435 305814196 305814303 1.500000e-37 167.0
24 TraesCS4B01G106100 chr7A 96.040 101 4 0 2335 2435 693810952 693810852 5.390000e-37 165.0
25 TraesCS4B01G106100 chr7A 97.059 34 0 1 1882 1915 734542772 734542740 3.380000e-04 56.5
26 TraesCS4B01G106100 chr6D 92.593 108 8 0 2328 2435 449913586 449913479 3.240000e-34 156.0
27 TraesCS4B01G106100 chr2A 97.778 90 1 1 784 872 754446729 754446818 1.170000e-33 154.0
28 TraesCS4B01G106100 chr7D 96.739 92 2 1 781 871 169446014 169445923 4.190000e-33 152.0
29 TraesCS4B01G106100 chr1A 95.745 94 3 1 776 868 548488454 548488361 1.510000e-32 150.0
30 TraesCS4B01G106100 chr7B 95.699 93 3 1 777 869 697607635 697607726 5.420000e-32 148.0
31 TraesCS4B01G106100 chr6B 95.699 93 3 1 780 871 173797185 173797093 5.420000e-32 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G106100 chr4B 115548689 115551123 2434 True 1965.50 3731 100.00000 1 2435 2 chr4B.!!$R1 2434
1 TraesCS4B01G106100 chr4A 491709346 491711228 1882 True 369.20 590 86.80920 5 1781 5 chr4A.!!$R2 1776
2 TraesCS4B01G106100 chr4D 81913384 81915479 2095 True 428.75 549 90.41175 76 1620 4 chr4D.!!$R1 1544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
894 1837 0.029567 GTCGCACTACTGGATCCTCG 59.97 60.0 14.23 6.69 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2350 3302 0.039437 CGCCGTCTTCACAGTGTAGT 60.039 55.0 7.04 0.0 0.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.529341 AACATGAGCGGTGGCGACA 62.529 57.895 0.00 0.00 46.35 4.35
51 52 2.693441 TGGCGACAGGTACGAAAGTGA 61.693 52.381 0.00 0.00 39.95 3.41
64 65 2.076863 GAAAGTGACGGCAGCTACAAT 58.923 47.619 0.00 0.00 0.00 2.71
69 70 1.076332 GACGGCAGCTACAATTTCGT 58.924 50.000 0.00 0.00 0.00 3.85
80 81 2.083774 ACAATTTCGTGCCGACATGAT 58.916 42.857 0.00 0.00 41.42 2.45
86 87 0.179084 CGTGCCGACATGATTACCCT 60.179 55.000 0.00 0.00 34.49 4.34
92 93 1.541233 CGACATGATTACCCTGAGCCC 60.541 57.143 0.00 0.00 0.00 5.19
116 120 2.668280 GCCGTCTCGTGCACCTTTC 61.668 63.158 12.15 0.00 0.00 2.62
144 148 3.171277 CAAATTAAGGAGCTTTTCGGCG 58.829 45.455 0.00 0.00 37.29 6.46
152 156 2.727684 GCTTTTCGGCGGTCTCGTC 61.728 63.158 7.21 0.00 38.89 4.20
153 157 1.080705 CTTTTCGGCGGTCTCGTCT 60.081 57.895 7.21 0.00 39.11 4.18
154 158 0.666577 CTTTTCGGCGGTCTCGTCTT 60.667 55.000 7.21 0.00 39.11 3.01
155 159 0.597568 TTTTCGGCGGTCTCGTCTTA 59.402 50.000 7.21 0.00 39.11 2.10
162 166 1.334243 GCGGTCTCGTCTTATAGCTGT 59.666 52.381 0.00 0.00 38.89 4.40
186 190 2.851071 CGGAGGCGGAGTGGATCTC 61.851 68.421 0.00 0.00 42.07 2.75
193 197 2.833582 GAGTGGATCTCGGGCGGA 60.834 66.667 0.00 0.00 33.25 5.54
198 202 2.666526 GATCTCGGGCGGATTGGC 60.667 66.667 0.00 0.00 43.88 4.52
202 214 4.215742 TCGGGCGGATTGGCTACG 62.216 66.667 0.00 0.00 44.11 3.51
280 302 4.044336 TCAAAACGAACGACCAACTAGA 57.956 40.909 0.00 0.00 0.00 2.43
307 330 8.797438 AGAAAAACCAAAAGCAAAAATAAACCA 58.203 25.926 0.00 0.00 0.00 3.67
308 331 8.749841 AAAAACCAAAAGCAAAAATAAACCAC 57.250 26.923 0.00 0.00 0.00 4.16
311 334 6.125719 ACCAAAAGCAAAAATAAACCACCAT 58.874 32.000 0.00 0.00 0.00 3.55
312 335 7.283329 ACCAAAAGCAAAAATAAACCACCATA 58.717 30.769 0.00 0.00 0.00 2.74
314 337 7.297391 CAAAAGCAAAAATAAACCACCATAGC 58.703 34.615 0.00 0.00 0.00 2.97
315 338 5.084818 AGCAAAAATAAACCACCATAGCC 57.915 39.130 0.00 0.00 0.00 3.93
316 339 4.530161 AGCAAAAATAAACCACCATAGCCA 59.470 37.500 0.00 0.00 0.00 4.75
319 342 6.638610 CAAAAATAAACCACCATAGCCATGA 58.361 36.000 0.00 0.00 33.67 3.07
349 372 8.703336 GCGCTAAAATTGAGAAGAAGAAAAATT 58.297 29.630 0.00 0.00 0.00 1.82
402 425 2.485302 GGCACAAAGGGCAAAAGTGAAT 60.485 45.455 0.00 0.00 32.14 2.57
449 699 8.921670 CCGGGTTAAAAATGAAATTAACTCTTG 58.078 33.333 0.00 0.00 39.33 3.02
500 785 0.388134 TGTCCGCTCAGACGTTTAGC 60.388 55.000 7.45 7.45 39.77 3.09
503 788 3.782042 GCTCAGACGTTTAGCGGG 58.218 61.111 0.00 0.00 46.52 6.13
505 790 0.802607 GCTCAGACGTTTAGCGGGAG 60.803 60.000 0.00 0.00 46.52 4.30
527 1450 2.053865 CGGTTGGATGCCTGCCAAT 61.054 57.895 0.00 0.00 46.21 3.16
553 1476 0.928505 TCCCTCTCCCCGTACATGTA 59.071 55.000 0.08 0.08 0.00 2.29
554 1477 1.502039 TCCCTCTCCCCGTACATGTAT 59.498 52.381 9.18 0.00 0.00 2.29
555 1478 2.718062 TCCCTCTCCCCGTACATGTATA 59.282 50.000 9.18 0.00 0.00 1.47
556 1479 3.140707 TCCCTCTCCCCGTACATGTATAA 59.859 47.826 9.18 0.00 0.00 0.98
557 1480 3.899360 CCCTCTCCCCGTACATGTATAAA 59.101 47.826 9.18 0.00 0.00 1.40
558 1481 4.530946 CCCTCTCCCCGTACATGTATAAAT 59.469 45.833 9.18 0.00 0.00 1.40
559 1482 5.479306 CCTCTCCCCGTACATGTATAAATG 58.521 45.833 9.18 0.99 0.00 2.32
560 1483 5.477607 TCTCCCCGTACATGTATAAATGG 57.522 43.478 9.18 3.16 31.46 3.16
561 1484 5.149239 TCTCCCCGTACATGTATAAATGGA 58.851 41.667 9.18 9.91 31.46 3.41
562 1485 5.783360 TCTCCCCGTACATGTATAAATGGAT 59.217 40.000 9.18 0.00 31.46 3.41
563 1486 6.955267 TCTCCCCGTACATGTATAAATGGATA 59.045 38.462 9.18 2.18 31.46 2.59
564 1487 7.123697 TCTCCCCGTACATGTATAAATGGATAG 59.876 40.741 9.18 4.71 31.46 2.08
565 1488 5.815740 CCCCGTACATGTATAAATGGATAGC 59.184 44.000 9.18 0.00 31.46 2.97
566 1489 6.351881 CCCCGTACATGTATAAATGGATAGCT 60.352 42.308 9.18 0.00 31.46 3.32
567 1490 7.147794 CCCCGTACATGTATAAATGGATAGCTA 60.148 40.741 9.18 0.00 31.46 3.32
568 1491 8.421784 CCCGTACATGTATAAATGGATAGCTAT 58.578 37.037 9.18 5.76 31.46 2.97
569 1492 9.464714 CCGTACATGTATAAATGGATAGCTATC 57.535 37.037 23.23 23.23 31.46 2.08
638 1561 1.781429 CGGATAGCGACAAGATTCGTG 59.219 52.381 0.00 0.00 41.26 4.35
742 1676 3.470567 GCTTCCGCTCACACGTCG 61.471 66.667 0.00 0.00 0.00 5.12
775 1709 2.436824 GCCGCTTTCTCCCCTCAC 60.437 66.667 0.00 0.00 0.00 3.51
776 1710 3.068881 CCGCTTTCTCCCCTCACA 58.931 61.111 0.00 0.00 0.00 3.58
777 1711 1.374947 CCGCTTTCTCCCCTCACAA 59.625 57.895 0.00 0.00 0.00 3.33
778 1712 0.955919 CCGCTTTCTCCCCTCACAAC 60.956 60.000 0.00 0.00 0.00 3.32
779 1713 0.250295 CGCTTTCTCCCCTCACAACA 60.250 55.000 0.00 0.00 0.00 3.33
781 1715 2.519013 GCTTTCTCCCCTCACAACATT 58.481 47.619 0.00 0.00 0.00 2.71
782 1716 3.686016 GCTTTCTCCCCTCACAACATTA 58.314 45.455 0.00 0.00 0.00 1.90
783 1717 4.273318 GCTTTCTCCCCTCACAACATTAT 58.727 43.478 0.00 0.00 0.00 1.28
784 1718 5.437060 GCTTTCTCCCCTCACAACATTATA 58.563 41.667 0.00 0.00 0.00 0.98
787 1721 5.871396 TCTCCCCTCACAACATTATACTC 57.129 43.478 0.00 0.00 0.00 2.59
789 1723 3.714798 TCCCCTCACAACATTATACTCCC 59.285 47.826 0.00 0.00 0.00 4.30
790 1724 3.716872 CCCCTCACAACATTATACTCCCT 59.283 47.826 0.00 0.00 0.00 4.20
793 1727 4.501571 CCTCACAACATTATACTCCCTCCG 60.502 50.000 0.00 0.00 0.00 4.63
795 1729 4.468510 TCACAACATTATACTCCCTCCGTT 59.531 41.667 0.00 0.00 0.00 4.44
796 1730 4.809426 CACAACATTATACTCCCTCCGTTC 59.191 45.833 0.00 0.00 0.00 3.95
800 1734 4.472108 ACATTATACTCCCTCCGTTCCAAA 59.528 41.667 0.00 0.00 0.00 3.28
801 1735 5.045432 ACATTATACTCCCTCCGTTCCAAAA 60.045 40.000 0.00 0.00 0.00 2.44
803 1737 6.811634 TTATACTCCCTCCGTTCCAAAATA 57.188 37.500 0.00 0.00 0.00 1.40
804 1738 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
805 1739 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
806 1740 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
807 1741 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
808 1742 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
809 1743 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
810 1744 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
811 1745 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
812 1746 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
813 1747 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
814 1748 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
815 1749 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
816 1750 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
817 1751 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
818 1752 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
819 1753 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
820 1754 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
821 1755 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
822 1756 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
861 1795 9.804758 AGTTAAGTCATCTATTTTAGAACGGAG 57.195 33.333 0.00 0.00 38.50 4.63
862 1796 9.032420 GTTAAGTCATCTATTTTAGAACGGAGG 57.968 37.037 0.00 0.00 38.50 4.30
863 1797 6.163135 AGTCATCTATTTTAGAACGGAGGG 57.837 41.667 0.00 0.00 38.50 4.30
864 1798 5.897824 AGTCATCTATTTTAGAACGGAGGGA 59.102 40.000 0.00 0.00 38.50 4.20
886 1820 6.372185 GGAGTATATAAGTGTCGCACTACTG 58.628 44.000 11.92 0.00 44.62 2.74
894 1837 0.029567 GTCGCACTACTGGATCCTCG 59.970 60.000 14.23 6.69 0.00 4.63
897 1840 1.103803 GCACTACTGGATCCTCGACA 58.896 55.000 14.23 0.00 0.00 4.35
959 1902 1.543802 ACCCAAAACACACACACACAG 59.456 47.619 0.00 0.00 0.00 3.66
961 1904 2.415357 CCCAAAACACACACACACAGAC 60.415 50.000 0.00 0.00 0.00 3.51
973 1916 1.893808 CACAGACCACACACAGGGC 60.894 63.158 0.00 0.00 0.00 5.19
975 1918 2.842462 AGACCACACACAGGGCGA 60.842 61.111 0.00 0.00 39.93 5.54
977 1920 3.161450 ACCACACACAGGGCGAGT 61.161 61.111 0.00 0.00 0.00 4.18
1035 1978 1.353694 AGCAAGCAACAAGGAGGAGAT 59.646 47.619 0.00 0.00 0.00 2.75
1037 1980 2.877300 GCAAGCAACAAGGAGGAGATCA 60.877 50.000 0.00 0.00 0.00 2.92
1045 1988 5.159273 ACAAGGAGGAGATCAAGAAGAAC 57.841 43.478 0.00 0.00 0.00 3.01
1047 1990 3.111484 AGGAGGAGATCAAGAAGAACCC 58.889 50.000 0.00 0.00 0.00 4.11
1079 2031 7.488322 CACAAAATGGTAAAAGAGGTGAAGAA 58.512 34.615 0.00 0.00 0.00 2.52
1080 2032 7.649306 CACAAAATGGTAAAAGAGGTGAAGAAG 59.351 37.037 0.00 0.00 0.00 2.85
1081 2033 7.559897 ACAAAATGGTAAAAGAGGTGAAGAAGA 59.440 33.333 0.00 0.00 0.00 2.87
1082 2034 7.751768 AAATGGTAAAAGAGGTGAAGAAGAG 57.248 36.000 0.00 0.00 0.00 2.85
1083 2035 5.888982 TGGTAAAAGAGGTGAAGAAGAGT 57.111 39.130 0.00 0.00 0.00 3.24
1084 2036 5.611374 TGGTAAAAGAGGTGAAGAAGAGTG 58.389 41.667 0.00 0.00 0.00 3.51
1085 2037 5.365605 TGGTAAAAGAGGTGAAGAAGAGTGA 59.634 40.000 0.00 0.00 0.00 3.41
1086 2038 5.929415 GGTAAAAGAGGTGAAGAAGAGTGAG 59.071 44.000 0.00 0.00 0.00 3.51
1087 2039 5.878406 AAAAGAGGTGAAGAAGAGTGAGA 57.122 39.130 0.00 0.00 0.00 3.27
1126 2078 2.025510 CAGCTCCCCTTCCATTCTCTTT 60.026 50.000 0.00 0.00 0.00 2.52
1183 2135 2.432628 GGCTGTCCTTCACGACGG 60.433 66.667 0.00 0.00 41.33 4.79
1191 2143 0.383860 CCTTCACGACGGCGAAAAAC 60.384 55.000 22.49 0.00 41.64 2.43
1269 2221 3.976758 TCGGACATCGACGACACT 58.023 55.556 0.00 0.00 43.74 3.55
1270 2222 1.500396 TCGGACATCGACGACACTG 59.500 57.895 0.00 0.00 43.74 3.66
1271 2223 1.209383 CGGACATCGACGACACTGT 59.791 57.895 0.00 0.00 42.43 3.55
1272 2224 0.445043 CGGACATCGACGACACTGTA 59.555 55.000 0.00 0.00 42.43 2.74
1273 2225 1.135888 CGGACATCGACGACACTGTAA 60.136 52.381 0.00 0.00 42.43 2.41
1274 2226 2.666344 CGGACATCGACGACACTGTAAA 60.666 50.000 0.00 0.00 42.43 2.01
1275 2227 2.660236 GGACATCGACGACACTGTAAAC 59.340 50.000 0.00 0.00 0.00 2.01
1276 2228 3.302555 GACATCGACGACACTGTAAACA 58.697 45.455 0.00 0.00 0.00 2.83
1293 2245 7.915293 TGTAAACAGTATAGGTGGACAAATG 57.085 36.000 0.00 0.00 0.00 2.32
1294 2246 7.681679 TGTAAACAGTATAGGTGGACAAATGA 58.318 34.615 0.00 0.00 0.00 2.57
1295 2247 7.604927 TGTAAACAGTATAGGTGGACAAATGAC 59.395 37.037 0.00 0.00 0.00 3.06
1296 2248 5.099042 ACAGTATAGGTGGACAAATGACC 57.901 43.478 0.00 0.00 0.00 4.02
1297 2249 4.119862 CAGTATAGGTGGACAAATGACCG 58.880 47.826 0.00 0.00 34.72 4.79
1298 2250 3.773119 AGTATAGGTGGACAAATGACCGT 59.227 43.478 0.00 0.00 34.72 4.83
1299 2251 2.754946 TAGGTGGACAAATGACCGTC 57.245 50.000 0.00 0.00 34.72 4.79
1328 2280 3.057456 CCTATGGACGAAGGGTTAGATCG 60.057 52.174 0.00 0.00 42.05 3.69
1357 2309 0.918258 TGGTCTGCATGCTATTCCCA 59.082 50.000 20.33 14.12 0.00 4.37
1413 2365 3.006752 CCCATAAGCTCAGCTCTAGGAAG 59.993 52.174 0.00 0.00 38.25 3.46
1446 2398 1.072266 TCAGCTGAGGGGCCTTTTTA 58.928 50.000 13.74 0.00 0.00 1.52
1485 2437 0.537188 TCGAGGACTGGCTGAATTCC 59.463 55.000 2.27 0.00 0.00 3.01
1526 2478 7.069331 TGGTCAAAGTGTACAATTTGGATTTCT 59.931 33.333 35.19 8.84 43.91 2.52
1563 2515 4.231718 ACATTGGAAAATTTGTACGCGT 57.768 36.364 19.17 19.17 0.00 6.01
1564 2516 4.223659 ACATTGGAAAATTTGTACGCGTC 58.776 39.130 18.63 8.55 0.00 5.19
1573 2525 6.665474 AAATTTGTACGCGTCCATGTATAA 57.335 33.333 18.63 0.74 0.00 0.98
1590 2542 9.334947 CCATGTATAACTTCTGATCTTGAATGT 57.665 33.333 0.00 0.00 0.00 2.71
1596 2548 9.823647 ATAACTTCTGATCTTGAATGTAATCGT 57.176 29.630 0.00 0.00 0.00 3.73
1597 2549 7.763172 ACTTCTGATCTTGAATGTAATCGTC 57.237 36.000 0.00 0.00 0.00 4.20
1598 2550 7.323420 ACTTCTGATCTTGAATGTAATCGTCA 58.677 34.615 0.00 0.00 0.00 4.35
1601 2553 9.816354 TTCTGATCTTGAATGTAATCGTCATTA 57.184 29.630 0.00 0.00 35.94 1.90
1602 2554 9.249457 TCTGATCTTGAATGTAATCGTCATTAC 57.751 33.333 0.00 1.11 43.39 1.89
1603 2555 9.254133 CTGATCTTGAATGTAATCGTCATTACT 57.746 33.333 8.08 0.00 43.46 2.24
1604 2556 9.599866 TGATCTTGAATGTAATCGTCATTACTT 57.400 29.630 8.08 0.73 43.46 2.24
1607 2559 9.031360 TCTTGAATGTAATCGTCATTACTTAGC 57.969 33.333 8.08 0.00 43.46 3.09
1608 2560 8.710835 TTGAATGTAATCGTCATTACTTAGCA 57.289 30.769 8.08 3.16 43.46 3.49
1609 2561 8.710835 TGAATGTAATCGTCATTACTTAGCAA 57.289 30.769 8.08 0.00 43.46 3.91
1610 2562 9.325198 TGAATGTAATCGTCATTACTTAGCAAT 57.675 29.630 8.08 0.00 43.46 3.56
1612 2564 8.662781 ATGTAATCGTCATTACTTAGCAATGT 57.337 30.769 5.23 0.00 43.46 2.71
1613 2565 7.905126 TGTAATCGTCATTACTTAGCAATGTG 58.095 34.615 5.23 0.85 43.46 3.21
1614 2566 6.985188 AATCGTCATTACTTAGCAATGTGT 57.015 33.333 5.23 0.00 35.36 3.72
1615 2567 5.778161 TCGTCATTACTTAGCAATGTGTG 57.222 39.130 5.23 0.00 35.36 3.82
1626 2578 1.135431 GCAATGTGTGTGTGTGTGTGT 60.135 47.619 0.00 0.00 0.00 3.72
1630 2582 1.001406 TGTGTGTGTGTGTGTGTCAGA 59.999 47.619 0.00 0.00 0.00 3.27
1666 2618 1.153804 GTCCGCCTCGAGAAACCTC 60.154 63.158 15.71 0.00 0.00 3.85
1784 2736 8.437360 AATCAATATGTAACATCAAGCGAAGA 57.563 30.769 0.00 0.00 0.00 2.87
1785 2737 8.613060 ATCAATATGTAACATCAAGCGAAGAT 57.387 30.769 0.00 0.00 0.00 2.40
1786 2738 8.437360 TCAATATGTAACATCAAGCGAAGATT 57.563 30.769 0.00 0.00 35.16 2.40
1787 2739 9.541143 TCAATATGTAACATCAAGCGAAGATTA 57.459 29.630 0.00 0.00 29.87 1.75
1790 2742 6.844696 TGTAACATCAAGCGAAGATTATCC 57.155 37.500 0.00 0.00 29.87 2.59
1791 2743 6.582636 TGTAACATCAAGCGAAGATTATCCT 58.417 36.000 0.00 0.00 29.87 3.24
1792 2744 5.998454 AACATCAAGCGAAGATTATCCTG 57.002 39.130 0.00 0.00 29.87 3.86
1793 2745 3.812053 ACATCAAGCGAAGATTATCCTGC 59.188 43.478 0.00 0.00 29.87 4.85
1794 2746 2.838736 TCAAGCGAAGATTATCCTGCC 58.161 47.619 0.00 0.00 29.87 4.85
1795 2747 2.170397 TCAAGCGAAGATTATCCTGCCA 59.830 45.455 0.00 0.00 29.87 4.92
1796 2748 2.246719 AGCGAAGATTATCCTGCCAC 57.753 50.000 0.00 0.00 0.00 5.01
1797 2749 1.765314 AGCGAAGATTATCCTGCCACT 59.235 47.619 0.00 0.00 0.00 4.00
1798 2750 2.139118 GCGAAGATTATCCTGCCACTC 58.861 52.381 0.00 0.00 0.00 3.51
1799 2751 2.483714 GCGAAGATTATCCTGCCACTCA 60.484 50.000 0.00 0.00 0.00 3.41
1800 2752 3.805108 GCGAAGATTATCCTGCCACTCAT 60.805 47.826 0.00 0.00 0.00 2.90
1801 2753 4.561530 GCGAAGATTATCCTGCCACTCATA 60.562 45.833 0.00 0.00 0.00 2.15
1802 2754 5.728471 CGAAGATTATCCTGCCACTCATAT 58.272 41.667 0.00 0.00 0.00 1.78
1803 2755 6.169094 CGAAGATTATCCTGCCACTCATATT 58.831 40.000 0.00 0.00 0.00 1.28
1804 2756 6.091849 CGAAGATTATCCTGCCACTCATATTG 59.908 42.308 0.00 0.00 0.00 1.90
1805 2757 5.251764 AGATTATCCTGCCACTCATATTGC 58.748 41.667 0.00 0.00 0.00 3.56
1806 2758 1.888215 ATCCTGCCACTCATATTGCG 58.112 50.000 0.00 0.00 0.00 4.85
1807 2759 0.541392 TCCTGCCACTCATATTGCGT 59.459 50.000 0.00 0.00 0.00 5.24
1808 2760 0.659427 CCTGCCACTCATATTGCGTG 59.341 55.000 0.00 0.00 33.22 5.34
1809 2761 1.655484 CTGCCACTCATATTGCGTGA 58.345 50.000 0.00 0.00 35.25 4.35
1810 2762 2.009051 CTGCCACTCATATTGCGTGAA 58.991 47.619 0.00 0.00 35.25 3.18
1811 2763 2.419673 CTGCCACTCATATTGCGTGAAA 59.580 45.455 0.00 0.00 35.25 2.69
1812 2764 2.816672 TGCCACTCATATTGCGTGAAAA 59.183 40.909 0.00 0.00 35.25 2.29
1813 2765 3.171277 GCCACTCATATTGCGTGAAAAC 58.829 45.455 0.00 0.00 35.25 2.43
1814 2766 3.758300 CCACTCATATTGCGTGAAAACC 58.242 45.455 0.00 0.00 35.25 3.27
1815 2767 3.440173 CCACTCATATTGCGTGAAAACCT 59.560 43.478 0.00 0.00 35.25 3.50
1816 2768 4.437390 CCACTCATATTGCGTGAAAACCTC 60.437 45.833 0.00 0.00 35.25 3.85
1817 2769 3.689649 ACTCATATTGCGTGAAAACCTCC 59.310 43.478 0.00 0.00 0.00 4.30
1818 2770 2.675844 TCATATTGCGTGAAAACCTCCG 59.324 45.455 0.00 0.00 0.00 4.63
1819 2771 2.172851 TATTGCGTGAAAACCTCCGT 57.827 45.000 0.00 0.00 0.00 4.69
1820 2772 0.591170 ATTGCGTGAAAACCTCCGTG 59.409 50.000 0.00 0.00 0.00 4.94
1821 2773 1.440938 TTGCGTGAAAACCTCCGTGG 61.441 55.000 0.00 0.00 42.93 4.94
1822 2774 2.943653 CGTGAAAACCTCCGTGGC 59.056 61.111 0.00 0.00 40.22 5.01
1823 2775 2.613506 CGTGAAAACCTCCGTGGCC 61.614 63.158 0.00 0.00 40.22 5.36
1824 2776 1.527380 GTGAAAACCTCCGTGGCCA 60.527 57.895 0.00 0.00 40.22 5.36
1825 2777 1.527380 TGAAAACCTCCGTGGCCAC 60.527 57.895 26.78 26.78 40.22 5.01
1826 2778 2.203437 AAAACCTCCGTGGCCACC 60.203 61.111 29.95 12.55 40.22 4.61
1827 2779 2.969300 GAAAACCTCCGTGGCCACCA 62.969 60.000 29.95 15.82 40.22 4.17
1828 2780 2.976494 AAAACCTCCGTGGCCACCAG 62.976 60.000 29.95 23.74 40.22 4.00
1831 2783 4.767255 CTCCGTGGCCACCAGCTC 62.767 72.222 29.95 4.29 43.05 4.09
1834 2786 4.641645 CGTGGCCACCAGCTCCAA 62.642 66.667 29.95 0.00 43.05 3.53
1835 2787 2.985847 GTGGCCACCAGCTCCAAC 60.986 66.667 26.31 0.00 43.05 3.77
1836 2788 4.284550 TGGCCACCAGCTCCAACC 62.285 66.667 0.00 0.00 43.05 3.77
1840 2792 4.988598 CACCAGCTCCAACCGCGT 62.989 66.667 4.92 0.00 0.00 6.01
1841 2793 3.307906 ACCAGCTCCAACCGCGTA 61.308 61.111 4.92 0.00 0.00 4.42
1842 2794 2.813908 CCAGCTCCAACCGCGTAC 60.814 66.667 4.92 0.00 0.00 3.67
1843 2795 2.048597 CAGCTCCAACCGCGTACA 60.049 61.111 4.92 0.00 0.00 2.90
1844 2796 2.048503 AGCTCCAACCGCGTACAC 60.049 61.111 4.92 0.00 0.00 2.90
1845 2797 2.356553 GCTCCAACCGCGTACACA 60.357 61.111 4.92 0.00 0.00 3.72
1846 2798 2.664436 GCTCCAACCGCGTACACAC 61.664 63.158 4.92 0.00 0.00 3.82
1847 2799 2.025418 CTCCAACCGCGTACACACC 61.025 63.158 4.92 0.00 0.00 4.16
1848 2800 3.408020 CCAACCGCGTACACACCG 61.408 66.667 4.92 0.00 0.00 4.94
1858 2810 3.589061 CGTACACACCGCTTTAAACAA 57.411 42.857 0.00 0.00 0.00 2.83
1859 2811 3.282428 CGTACACACCGCTTTAAACAAC 58.718 45.455 0.00 0.00 0.00 3.32
1860 2812 2.461897 ACACACCGCTTTAAACAACG 57.538 45.000 0.00 0.00 0.00 4.10
1865 2817 2.886587 CCGCTTTAAACAACGGTAGG 57.113 50.000 10.12 0.00 40.77 3.18
1866 2818 2.145536 CCGCTTTAAACAACGGTAGGT 58.854 47.619 10.12 0.00 40.77 3.08
1867 2819 3.324993 CCGCTTTAAACAACGGTAGGTA 58.675 45.455 10.12 0.00 40.77 3.08
1868 2820 3.745458 CCGCTTTAAACAACGGTAGGTAA 59.255 43.478 10.12 0.00 40.77 2.85
1869 2821 4.392754 CCGCTTTAAACAACGGTAGGTAAT 59.607 41.667 10.12 0.00 40.77 1.89
1870 2822 5.106594 CCGCTTTAAACAACGGTAGGTAATT 60.107 40.000 10.12 0.00 40.77 1.40
1871 2823 6.017325 CGCTTTAAACAACGGTAGGTAATTC 58.983 40.000 0.00 0.00 0.00 2.17
1872 2824 6.347563 CGCTTTAAACAACGGTAGGTAATTCA 60.348 38.462 0.00 0.00 0.00 2.57
1873 2825 7.532571 GCTTTAAACAACGGTAGGTAATTCAT 58.467 34.615 0.00 0.00 0.00 2.57
1874 2826 8.667463 GCTTTAAACAACGGTAGGTAATTCATA 58.333 33.333 0.00 0.00 0.00 2.15
1875 2827 9.977762 CTTTAAACAACGGTAGGTAATTCATAC 57.022 33.333 0.00 0.00 33.22 2.39
1876 2828 6.651755 AAACAACGGTAGGTAATTCATACG 57.348 37.500 0.00 0.00 34.59 3.06
1877 2829 4.685924 ACAACGGTAGGTAATTCATACGG 58.314 43.478 0.00 0.00 38.78 4.02
1878 2830 4.160252 ACAACGGTAGGTAATTCATACGGT 59.840 41.667 0.00 6.92 44.38 4.83
1879 2831 4.574599 ACGGTAGGTAATTCATACGGTC 57.425 45.455 0.00 0.00 40.80 4.79
1880 2832 3.953612 ACGGTAGGTAATTCATACGGTCA 59.046 43.478 0.00 0.00 40.80 4.02
1881 2833 4.202050 ACGGTAGGTAATTCATACGGTCAC 60.202 45.833 0.00 0.00 40.80 3.67
1882 2834 4.037208 CGGTAGGTAATTCATACGGTCACT 59.963 45.833 0.00 0.00 34.59 3.41
1883 2835 5.450965 CGGTAGGTAATTCATACGGTCACTT 60.451 44.000 0.00 0.00 34.59 3.16
1884 2836 5.981915 GGTAGGTAATTCATACGGTCACTTC 59.018 44.000 0.00 0.00 34.59 3.01
1885 2837 5.934402 AGGTAATTCATACGGTCACTTCT 57.066 39.130 0.00 0.00 35.19 2.85
1886 2838 6.295719 AGGTAATTCATACGGTCACTTCTT 57.704 37.500 0.00 0.00 35.19 2.52
1887 2839 6.338937 AGGTAATTCATACGGTCACTTCTTC 58.661 40.000 0.00 0.00 35.19 2.87
1888 2840 5.231568 GGTAATTCATACGGTCACTTCTTCG 59.768 44.000 0.00 0.00 35.19 3.79
1889 2841 2.933495 TCATACGGTCACTTCTTCGG 57.067 50.000 0.00 0.00 0.00 4.30
1890 2842 2.165167 TCATACGGTCACTTCTTCGGT 58.835 47.619 0.00 0.00 0.00 4.69
1891 2843 3.346315 TCATACGGTCACTTCTTCGGTA 58.654 45.455 0.00 0.00 0.00 4.02
1892 2844 3.127548 TCATACGGTCACTTCTTCGGTAC 59.872 47.826 0.00 0.00 0.00 3.34
1893 2845 1.321474 ACGGTCACTTCTTCGGTACA 58.679 50.000 0.00 0.00 0.00 2.90
1894 2846 1.682854 ACGGTCACTTCTTCGGTACAA 59.317 47.619 0.00 0.00 0.00 2.41
1895 2847 2.056577 CGGTCACTTCTTCGGTACAAC 58.943 52.381 0.00 0.00 0.00 3.32
1896 2848 2.410939 GGTCACTTCTTCGGTACAACC 58.589 52.381 0.00 0.00 34.05 3.77
1897 2849 2.410939 GTCACTTCTTCGGTACAACCC 58.589 52.381 0.00 0.00 33.75 4.11
1898 2850 1.345415 TCACTTCTTCGGTACAACCCC 59.655 52.381 0.00 0.00 33.75 4.95
1899 2851 1.346722 CACTTCTTCGGTACAACCCCT 59.653 52.381 0.00 0.00 33.75 4.79
1900 2852 2.564062 CACTTCTTCGGTACAACCCCTA 59.436 50.000 0.00 0.00 33.75 3.53
1901 2853 3.007182 CACTTCTTCGGTACAACCCCTAA 59.993 47.826 0.00 0.00 33.75 2.69
1902 2854 3.647590 ACTTCTTCGGTACAACCCCTAAA 59.352 43.478 0.00 0.00 33.75 1.85
1903 2855 3.683365 TCTTCGGTACAACCCCTAAAC 57.317 47.619 0.00 0.00 33.75 2.01
1904 2856 2.971330 TCTTCGGTACAACCCCTAAACA 59.029 45.455 0.00 0.00 33.75 2.83
1905 2857 2.837532 TCGGTACAACCCCTAAACAC 57.162 50.000 0.00 0.00 33.75 3.32
1906 2858 2.045524 TCGGTACAACCCCTAAACACA 58.954 47.619 0.00 0.00 33.75 3.72
1907 2859 2.638855 TCGGTACAACCCCTAAACACAT 59.361 45.455 0.00 0.00 33.75 3.21
1908 2860 3.004862 CGGTACAACCCCTAAACACATC 58.995 50.000 0.00 0.00 33.75 3.06
1909 2861 3.557475 CGGTACAACCCCTAAACACATCA 60.557 47.826 0.00 0.00 33.75 3.07
1910 2862 4.400120 GGTACAACCCCTAAACACATCAA 58.600 43.478 0.00 0.00 30.04 2.57
1911 2863 4.216902 GGTACAACCCCTAAACACATCAAC 59.783 45.833 0.00 0.00 30.04 3.18
1912 2864 4.178956 ACAACCCCTAAACACATCAACT 57.821 40.909 0.00 0.00 0.00 3.16
1913 2865 3.888930 ACAACCCCTAAACACATCAACTG 59.111 43.478 0.00 0.00 0.00 3.16
1914 2866 3.154827 ACCCCTAAACACATCAACTGG 57.845 47.619 0.00 0.00 0.00 4.00
1915 2867 1.818674 CCCCTAAACACATCAACTGGC 59.181 52.381 0.00 0.00 0.00 4.85
1916 2868 1.818674 CCCTAAACACATCAACTGGCC 59.181 52.381 0.00 0.00 0.00 5.36
1917 2869 1.818674 CCTAAACACATCAACTGGCCC 59.181 52.381 0.00 0.00 0.00 5.80
1918 2870 1.468520 CTAAACACATCAACTGGCCCG 59.531 52.381 0.00 0.00 0.00 6.13
1919 2871 1.178534 AAACACATCAACTGGCCCGG 61.179 55.000 0.00 0.00 0.00 5.73
1920 2872 2.034066 CACATCAACTGGCCCGGT 59.966 61.111 0.00 0.00 0.00 5.28
1921 2873 2.040544 CACATCAACTGGCCCGGTC 61.041 63.158 0.00 0.00 0.00 4.79
1922 2874 2.350895 CATCAACTGGCCCGGTCA 59.649 61.111 0.00 0.00 0.00 4.02
1923 2875 1.303236 CATCAACTGGCCCGGTCAA 60.303 57.895 0.00 0.00 0.00 3.18
1924 2876 1.303317 ATCAACTGGCCCGGTCAAC 60.303 57.895 0.00 0.00 0.00 3.18
1925 2877 1.779061 ATCAACTGGCCCGGTCAACT 61.779 55.000 0.00 0.00 0.00 3.16
1926 2878 2.113139 AACTGGCCCGGTCAACTG 59.887 61.111 0.00 0.00 0.00 3.16
1927 2879 3.491598 AACTGGCCCGGTCAACTGG 62.492 63.158 0.00 0.66 42.13 4.00
1932 2884 3.953775 CCCGGTCAACTGGCCAGT 61.954 66.667 33.20 33.20 44.94 4.00
1933 2885 2.358737 CCGGTCAACTGGCCAGTC 60.359 66.667 37.75 24.91 41.58 3.51
1934 2886 2.743718 CGGTCAACTGGCCAGTCT 59.256 61.111 37.75 24.06 41.58 3.24
1935 2887 1.541310 CCGGTCAACTGGCCAGTCTA 61.541 60.000 37.75 25.31 41.58 2.59
1936 2888 0.108615 CGGTCAACTGGCCAGTCTAG 60.109 60.000 37.75 28.08 41.58 2.43
1937 2889 0.977395 GGTCAACTGGCCAGTCTAGT 59.023 55.000 37.75 20.51 41.58 2.57
1938 2890 2.176889 GGTCAACTGGCCAGTCTAGTA 58.823 52.381 37.75 18.51 41.58 1.82
1939 2891 2.565834 GGTCAACTGGCCAGTCTAGTAA 59.434 50.000 37.75 16.77 41.58 2.24
1940 2892 3.007614 GGTCAACTGGCCAGTCTAGTAAA 59.992 47.826 37.75 15.40 41.58 2.01
1941 2893 4.323562 GGTCAACTGGCCAGTCTAGTAAAT 60.324 45.833 37.75 17.70 41.58 1.40
1942 2894 5.246307 GTCAACTGGCCAGTCTAGTAAATT 58.754 41.667 37.75 16.92 41.58 1.82
1943 2895 5.122396 GTCAACTGGCCAGTCTAGTAAATTG 59.878 44.000 37.75 26.82 41.58 2.32
1944 2896 4.222124 ACTGGCCAGTCTAGTAAATTGG 57.778 45.455 33.20 4.81 36.92 3.16
1945 2897 3.844211 ACTGGCCAGTCTAGTAAATTGGA 59.156 43.478 33.20 0.00 36.92 3.53
1946 2898 4.192317 CTGGCCAGTCTAGTAAATTGGAC 58.808 47.826 25.53 0.00 37.46 4.02
1947 2899 3.585289 TGGCCAGTCTAGTAAATTGGACA 59.415 43.478 0.00 0.00 44.42 4.02
1948 2900 4.227300 TGGCCAGTCTAGTAAATTGGACAT 59.773 41.667 0.00 0.00 41.87 3.06
1949 2901 4.576463 GGCCAGTCTAGTAAATTGGACATG 59.424 45.833 0.00 0.00 36.91 3.21
1950 2902 4.576463 GCCAGTCTAGTAAATTGGACATGG 59.424 45.833 0.00 0.00 33.94 3.66
1951 2903 5.629133 GCCAGTCTAGTAAATTGGACATGGA 60.629 44.000 0.00 0.00 33.31 3.41
1952 2904 6.414732 CCAGTCTAGTAAATTGGACATGGAA 58.585 40.000 0.00 0.00 33.31 3.53
1953 2905 6.884295 CCAGTCTAGTAAATTGGACATGGAAA 59.116 38.462 0.00 0.00 33.31 3.13
1954 2906 7.148239 CCAGTCTAGTAAATTGGACATGGAAAC 60.148 40.741 0.00 0.00 33.31 2.78
1969 2921 2.625790 TGGAAACAGGGTTTTGATTCGG 59.374 45.455 0.00 0.00 32.49 4.30
1970 2922 2.029380 GGAAACAGGGTTTTGATTCGGG 60.029 50.000 0.00 0.00 32.49 5.14
1971 2923 2.668144 AACAGGGTTTTGATTCGGGA 57.332 45.000 0.00 0.00 0.00 5.14
1972 2924 2.899303 ACAGGGTTTTGATTCGGGAT 57.101 45.000 0.00 0.00 0.00 3.85
1973 2925 4.310022 AACAGGGTTTTGATTCGGGATA 57.690 40.909 0.00 0.00 0.00 2.59
1974 2926 3.617284 ACAGGGTTTTGATTCGGGATAC 58.383 45.455 0.00 0.00 0.00 2.24
1975 2927 3.265995 ACAGGGTTTTGATTCGGGATACT 59.734 43.478 0.00 0.00 0.00 2.12
1976 2928 4.263771 ACAGGGTTTTGATTCGGGATACTT 60.264 41.667 0.00 0.00 0.00 2.24
1977 2929 4.705023 CAGGGTTTTGATTCGGGATACTTT 59.295 41.667 0.00 0.00 0.00 2.66
1978 2930 4.948004 AGGGTTTTGATTCGGGATACTTTC 59.052 41.667 0.00 0.00 0.00 2.62
1979 2931 4.201881 GGGTTTTGATTCGGGATACTTTCG 60.202 45.833 0.00 0.00 0.00 3.46
1980 2932 4.393990 GGTTTTGATTCGGGATACTTTCGT 59.606 41.667 0.00 0.00 0.00 3.85
1981 2933 5.106436 GGTTTTGATTCGGGATACTTTCGTT 60.106 40.000 0.00 0.00 0.00 3.85
1982 2934 5.539582 TTTGATTCGGGATACTTTCGTTG 57.460 39.130 0.00 0.00 0.00 4.10
1983 2935 2.933906 TGATTCGGGATACTTTCGTTGC 59.066 45.455 0.00 0.00 0.00 4.17
1984 2936 1.729284 TTCGGGATACTTTCGTTGCC 58.271 50.000 0.00 0.00 0.00 4.52
1985 2937 0.899720 TCGGGATACTTTCGTTGCCT 59.100 50.000 0.00 0.00 0.00 4.75
1986 2938 1.276989 TCGGGATACTTTCGTTGCCTT 59.723 47.619 0.00 0.00 0.00 4.35
1987 2939 1.396996 CGGGATACTTTCGTTGCCTTG 59.603 52.381 0.00 0.00 0.00 3.61
1988 2940 1.743394 GGGATACTTTCGTTGCCTTGG 59.257 52.381 0.00 0.00 0.00 3.61
1989 2941 2.617021 GGGATACTTTCGTTGCCTTGGA 60.617 50.000 0.00 0.00 0.00 3.53
1990 2942 3.279434 GGATACTTTCGTTGCCTTGGAT 58.721 45.455 0.00 0.00 0.00 3.41
1991 2943 3.065371 GGATACTTTCGTTGCCTTGGATG 59.935 47.826 0.00 0.00 0.00 3.51
1992 2944 1.981256 ACTTTCGTTGCCTTGGATGT 58.019 45.000 0.00 0.00 0.00 3.06
1993 2945 2.306847 ACTTTCGTTGCCTTGGATGTT 58.693 42.857 0.00 0.00 0.00 2.71
1994 2946 2.034558 ACTTTCGTTGCCTTGGATGTTG 59.965 45.455 0.00 0.00 0.00 3.33
1995 2947 0.313672 TTCGTTGCCTTGGATGTTGC 59.686 50.000 0.00 0.00 0.00 4.17
1996 2948 0.537143 TCGTTGCCTTGGATGTTGCT 60.537 50.000 0.00 0.00 0.00 3.91
1997 2949 0.387622 CGTTGCCTTGGATGTTGCTG 60.388 55.000 0.00 0.00 0.00 4.41
1998 2950 0.668401 GTTGCCTTGGATGTTGCTGC 60.668 55.000 0.00 0.00 0.00 5.25
1999 2951 1.818959 TTGCCTTGGATGTTGCTGCC 61.819 55.000 0.00 0.00 0.00 4.85
2000 2952 2.277591 GCCTTGGATGTTGCTGCCA 61.278 57.895 0.00 0.00 0.00 4.92
2001 2953 1.610554 GCCTTGGATGTTGCTGCCAT 61.611 55.000 0.00 0.00 0.00 4.40
2002 2954 0.899720 CCTTGGATGTTGCTGCCATT 59.100 50.000 0.00 0.00 0.00 3.16
2003 2955 2.101783 CCTTGGATGTTGCTGCCATTA 58.898 47.619 0.00 0.00 0.00 1.90
2004 2956 2.696707 CCTTGGATGTTGCTGCCATTAT 59.303 45.455 0.00 0.00 0.00 1.28
2005 2957 3.890756 CCTTGGATGTTGCTGCCATTATA 59.109 43.478 0.00 0.00 0.00 0.98
2006 2958 4.341806 CCTTGGATGTTGCTGCCATTATAA 59.658 41.667 0.00 0.00 0.00 0.98
2007 2959 5.163426 CCTTGGATGTTGCTGCCATTATAAA 60.163 40.000 0.00 0.00 0.00 1.40
2008 2960 5.261209 TGGATGTTGCTGCCATTATAAAC 57.739 39.130 0.00 0.00 0.00 2.01
2009 2961 4.708909 TGGATGTTGCTGCCATTATAAACA 59.291 37.500 0.00 0.00 32.60 2.83
2010 2962 5.363292 TGGATGTTGCTGCCATTATAAACAT 59.637 36.000 10.74 10.74 40.06 2.71
2011 2963 6.127111 TGGATGTTGCTGCCATTATAAACATT 60.127 34.615 11.81 0.07 38.12 2.71
2012 2964 6.421801 GGATGTTGCTGCCATTATAAACATTC 59.578 38.462 11.81 7.64 38.12 2.67
2013 2965 5.659463 TGTTGCTGCCATTATAAACATTCC 58.341 37.500 0.00 0.00 0.00 3.01
2014 2966 5.421693 TGTTGCTGCCATTATAAACATTCCT 59.578 36.000 0.00 0.00 0.00 3.36
2015 2967 6.605194 TGTTGCTGCCATTATAAACATTCCTA 59.395 34.615 0.00 0.00 0.00 2.94
2016 2968 7.287466 TGTTGCTGCCATTATAAACATTCCTAT 59.713 33.333 0.00 0.00 0.00 2.57
2017 2969 7.452880 TGCTGCCATTATAAACATTCCTATC 57.547 36.000 0.00 0.00 0.00 2.08
2018 2970 6.434028 TGCTGCCATTATAAACATTCCTATCC 59.566 38.462 0.00 0.00 0.00 2.59
2019 2971 6.403636 GCTGCCATTATAAACATTCCTATCCG 60.404 42.308 0.00 0.00 0.00 4.18
2347 3299 3.492102 ATGGGTGTTTGATAGATCGGG 57.508 47.619 0.00 0.00 0.00 5.14
2348 3300 1.134220 TGGGTGTTTGATAGATCGGGC 60.134 52.381 0.00 0.00 0.00 6.13
2349 3301 1.134220 GGGTGTTTGATAGATCGGGCA 60.134 52.381 0.00 0.00 0.00 5.36
2350 3302 2.639065 GGTGTTTGATAGATCGGGCAA 58.361 47.619 0.00 0.00 0.00 4.52
2351 3303 2.354821 GGTGTTTGATAGATCGGGCAAC 59.645 50.000 0.00 0.00 0.00 4.17
2352 3304 3.270877 GTGTTTGATAGATCGGGCAACT 58.729 45.455 0.00 0.00 0.00 3.16
2353 3305 4.439057 GTGTTTGATAGATCGGGCAACTA 58.561 43.478 0.00 0.00 0.00 2.24
2354 3306 4.270325 GTGTTTGATAGATCGGGCAACTAC 59.730 45.833 0.00 0.00 0.00 2.73
2355 3307 4.081365 TGTTTGATAGATCGGGCAACTACA 60.081 41.667 0.00 0.00 0.00 2.74
2356 3308 3.728076 TGATAGATCGGGCAACTACAC 57.272 47.619 0.00 0.00 0.00 2.90
2357 3309 3.296854 TGATAGATCGGGCAACTACACT 58.703 45.455 0.00 0.00 0.00 3.55
2358 3310 3.068165 TGATAGATCGGGCAACTACACTG 59.932 47.826 0.00 0.00 0.00 3.66
2359 3311 1.267121 AGATCGGGCAACTACACTGT 58.733 50.000 0.00 0.00 0.00 3.55
2360 3312 1.066858 AGATCGGGCAACTACACTGTG 60.067 52.381 6.19 6.19 0.00 3.66
2361 3313 0.973632 ATCGGGCAACTACACTGTGA 59.026 50.000 15.86 0.00 0.00 3.58
2362 3314 0.753867 TCGGGCAACTACACTGTGAA 59.246 50.000 15.86 0.00 0.00 3.18
2363 3315 1.148310 CGGGCAACTACACTGTGAAG 58.852 55.000 15.86 0.52 0.00 3.02
2364 3316 1.270094 CGGGCAACTACACTGTGAAGA 60.270 52.381 15.86 0.00 0.00 2.87
2365 3317 2.143925 GGGCAACTACACTGTGAAGAC 58.856 52.381 15.86 1.20 0.00 3.01
2366 3318 1.792949 GGCAACTACACTGTGAAGACG 59.207 52.381 15.86 1.11 0.00 4.18
2367 3319 1.792949 GCAACTACACTGTGAAGACGG 59.207 52.381 15.86 0.68 34.25 4.79
2368 3320 1.792949 CAACTACACTGTGAAGACGGC 59.207 52.381 15.86 0.00 30.67 5.68
2369 3321 0.039437 ACTACACTGTGAAGACGGCG 60.039 55.000 15.86 4.80 30.67 6.46
2370 3322 0.039437 CTACACTGTGAAGACGGCGT 60.039 55.000 14.65 14.65 30.67 5.68
2371 3323 1.198408 CTACACTGTGAAGACGGCGTA 59.802 52.381 14.74 0.00 30.67 4.42
2372 3324 0.318445 ACACTGTGAAGACGGCGTAC 60.318 55.000 14.74 8.33 30.67 3.67
2373 3325 1.007336 CACTGTGAAGACGGCGTACC 61.007 60.000 14.74 0.25 30.67 3.34
2383 3335 4.078516 GGCGTACCGGGCTCTTGT 62.079 66.667 6.32 0.00 0.00 3.16
2384 3336 2.813908 GCGTACCGGGCTCTTGTG 60.814 66.667 6.32 0.00 0.00 3.33
2385 3337 2.967397 CGTACCGGGCTCTTGTGA 59.033 61.111 6.32 0.00 0.00 3.58
2386 3338 1.445582 CGTACCGGGCTCTTGTGAC 60.446 63.158 6.32 0.00 0.00 3.67
2387 3339 1.874345 CGTACCGGGCTCTTGTGACT 61.874 60.000 6.32 0.00 0.00 3.41
2388 3340 0.108756 GTACCGGGCTCTTGTGACTC 60.109 60.000 6.32 0.00 0.00 3.36
2389 3341 0.541063 TACCGGGCTCTTGTGACTCA 60.541 55.000 6.32 0.00 0.00 3.41
2390 3342 1.079543 CCGGGCTCTTGTGACTCAG 60.080 63.158 0.00 0.00 0.00 3.35
2391 3343 1.536073 CCGGGCTCTTGTGACTCAGA 61.536 60.000 0.00 0.00 0.00 3.27
2392 3344 0.318441 CGGGCTCTTGTGACTCAGAA 59.682 55.000 0.00 0.00 0.00 3.02
2393 3345 1.270305 CGGGCTCTTGTGACTCAGAAA 60.270 52.381 0.00 0.00 0.00 2.52
2394 3346 2.421619 GGGCTCTTGTGACTCAGAAAG 58.578 52.381 0.00 0.00 0.00 2.62
2395 3347 2.037772 GGGCTCTTGTGACTCAGAAAGA 59.962 50.000 4.70 4.70 0.00 2.52
2417 3369 4.001618 GCAATTAGCTCTAGAGGAAGGG 57.998 50.000 21.23 0.00 41.15 3.95
2418 3370 3.643792 GCAATTAGCTCTAGAGGAAGGGA 59.356 47.826 21.23 0.00 41.15 4.20
2419 3371 4.502431 GCAATTAGCTCTAGAGGAAGGGAC 60.502 50.000 21.23 2.66 41.15 4.46
2420 3372 2.642154 TAGCTCTAGAGGAAGGGACG 57.358 55.000 21.23 0.00 0.00 4.79
2421 3373 0.106419 AGCTCTAGAGGAAGGGACGG 60.106 60.000 21.23 0.00 0.00 4.79
2422 3374 1.740332 GCTCTAGAGGAAGGGACGGC 61.740 65.000 21.23 0.00 0.00 5.68
2423 3375 0.106419 CTCTAGAGGAAGGGACGGCT 60.106 60.000 12.27 0.00 0.00 5.52
2424 3376 1.143277 CTCTAGAGGAAGGGACGGCTA 59.857 57.143 12.27 0.00 0.00 3.93
2425 3377 1.133853 TCTAGAGGAAGGGACGGCTAC 60.134 57.143 0.00 0.00 0.00 3.58
2426 3378 0.106318 TAGAGGAAGGGACGGCTACC 60.106 60.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.752322 TTTCGTACCTGTCGCCACCG 62.752 60.000 0.00 0.00 0.00 4.94
38 39 0.038526 CTGCCGTCACTTTCGTACCT 60.039 55.000 0.00 0.00 0.00 3.08
51 52 0.796312 CACGAAATTGTAGCTGCCGT 59.204 50.000 0.00 0.00 0.00 5.68
69 70 1.138859 CTCAGGGTAATCATGTCGGCA 59.861 52.381 0.00 0.00 0.00 5.69
80 81 1.306997 CAGAGGGGGCTCAGGGTAA 60.307 63.158 0.00 0.00 0.00 2.85
92 93 4.803426 GCACGAGACGGCAGAGGG 62.803 72.222 0.00 0.00 0.00 4.30
116 120 8.699749 CCGAAAAGCTCCTTAATTTGTTAAAAG 58.300 33.333 0.00 0.00 0.00 2.27
140 144 0.385723 GCTATAAGACGAGACCGCCG 60.386 60.000 0.00 0.00 39.95 6.46
144 148 3.491104 CCCAACAGCTATAAGACGAGACC 60.491 52.174 0.00 0.00 0.00 3.85
152 156 0.468226 TCCGGCCCAACAGCTATAAG 59.532 55.000 0.00 0.00 0.00 1.73
153 157 0.468226 CTCCGGCCCAACAGCTATAA 59.532 55.000 0.00 0.00 0.00 0.98
154 158 1.407656 CCTCCGGCCCAACAGCTATA 61.408 60.000 0.00 0.00 0.00 1.31
155 159 2.746375 CCTCCGGCCCAACAGCTAT 61.746 63.158 0.00 0.00 0.00 2.97
186 190 4.215742 TCGTAGCCAATCCGCCCG 62.216 66.667 0.00 0.00 0.00 6.13
193 197 2.160721 TCTTCCTCCTCGTAGCCAAT 57.839 50.000 0.00 0.00 0.00 3.16
198 202 2.101582 CCCACATTCTTCCTCCTCGTAG 59.898 54.545 0.00 0.00 0.00 3.51
202 214 2.192263 ACTCCCACATTCTTCCTCCTC 58.808 52.381 0.00 0.00 0.00 3.71
249 261 4.029750 GTCGTTCGTTTTGAAACCAAACTG 59.970 41.667 13.22 9.29 38.60 3.16
250 262 4.160594 GTCGTTCGTTTTGAAACCAAACT 58.839 39.130 13.22 0.00 38.60 2.66
252 264 3.057736 TGGTCGTTCGTTTTGAAACCAAA 60.058 39.130 1.34 0.00 42.04 3.28
255 267 2.828874 TGGTCGTTCGTTTTGAAACC 57.171 45.000 1.34 0.00 38.60 3.27
256 268 3.750512 AGTTGGTCGTTCGTTTTGAAAC 58.249 40.909 0.00 0.00 38.60 2.78
257 269 4.869297 TCTAGTTGGTCGTTCGTTTTGAAA 59.131 37.500 0.00 0.00 38.60 2.69
261 273 4.685924 TCTTCTAGTTGGTCGTTCGTTTT 58.314 39.130 0.00 0.00 0.00 2.43
265 286 5.429615 GTTTTTCTTCTAGTTGGTCGTTCG 58.570 41.667 0.00 0.00 0.00 3.95
280 302 9.632807 GGTTTATTTTTGCTTTTGGTTTTTCTT 57.367 25.926 0.00 0.00 0.00 2.52
307 330 1.097547 GCGCTTGTCATGGCTATGGT 61.098 55.000 10.47 0.00 34.97 3.55
308 331 0.816825 AGCGCTTGTCATGGCTATGG 60.817 55.000 2.64 0.00 34.97 2.74
311 334 2.394930 TTTAGCGCTTGTCATGGCTA 57.605 45.000 18.68 0.00 36.97 3.93
312 335 1.533625 TTTTAGCGCTTGTCATGGCT 58.466 45.000 18.68 0.00 39.44 4.75
314 337 4.095410 TCAATTTTAGCGCTTGTCATGG 57.905 40.909 18.68 0.51 0.00 3.66
315 338 4.973396 TCTCAATTTTAGCGCTTGTCATG 58.027 39.130 18.68 10.59 0.00 3.07
316 339 5.412594 TCTTCTCAATTTTAGCGCTTGTCAT 59.587 36.000 18.68 0.00 0.00 3.06
319 342 5.470098 TCTTCTTCTCAATTTTAGCGCTTGT 59.530 36.000 18.68 0.00 0.00 3.16
349 372 6.523840 ACCCTCGTGTGTACATTTTAACTTA 58.476 36.000 0.00 0.00 0.00 2.24
449 699 3.374678 TCCGGTGCCGACATTAATAAAAC 59.625 43.478 12.71 0.00 42.83 2.43
501 786 2.590092 CATCCAACCGGACCTCCC 59.410 66.667 9.46 0.00 46.79 4.30
502 787 2.124695 GCATCCAACCGGACCTCC 60.125 66.667 9.46 0.00 46.79 4.30
503 788 2.124695 GGCATCCAACCGGACCTC 60.125 66.667 9.46 0.00 46.79 3.85
505 790 2.438434 CAGGCATCCAACCGGACC 60.438 66.667 9.46 0.00 46.79 4.46
527 1450 1.302949 CGGGGAGAGGGAAAATGCA 59.697 57.895 0.00 0.00 0.00 3.96
535 1458 2.011122 ATACATGTACGGGGAGAGGG 57.989 55.000 7.96 0.00 0.00 4.30
576 1499 7.175990 AGGTCGCTATCCATTTTACTTCAAAAA 59.824 33.333 0.00 0.00 39.51 1.94
577 1500 6.657541 AGGTCGCTATCCATTTTACTTCAAAA 59.342 34.615 0.00 0.00 40.34 2.44
578 1501 6.177610 AGGTCGCTATCCATTTTACTTCAAA 58.822 36.000 0.00 0.00 0.00 2.69
579 1502 5.741011 AGGTCGCTATCCATTTTACTTCAA 58.259 37.500 0.00 0.00 0.00 2.69
580 1503 5.353394 AGGTCGCTATCCATTTTACTTCA 57.647 39.130 0.00 0.00 0.00 3.02
581 1504 5.007724 CCAAGGTCGCTATCCATTTTACTTC 59.992 44.000 0.00 0.00 0.00 3.01
582 1505 4.881850 CCAAGGTCGCTATCCATTTTACTT 59.118 41.667 0.00 0.00 0.00 2.24
583 1506 4.451900 CCAAGGTCGCTATCCATTTTACT 58.548 43.478 0.00 0.00 0.00 2.24
584 1507 3.003378 GCCAAGGTCGCTATCCATTTTAC 59.997 47.826 0.00 0.00 0.00 2.01
585 1508 3.211045 GCCAAGGTCGCTATCCATTTTA 58.789 45.455 0.00 0.00 0.00 1.52
586 1509 2.024414 GCCAAGGTCGCTATCCATTTT 58.976 47.619 0.00 0.00 0.00 1.82
618 1541 1.781429 CACGAATCTTGTCGCTATCCG 59.219 52.381 0.00 0.00 45.00 4.18
638 1561 1.069159 TCTTCGTCGCTGACTTGTCTC 60.069 52.381 2.35 0.00 0.00 3.36
686 1609 2.519377 TTGACTTGATCGTCACGGTT 57.481 45.000 0.00 0.00 43.11 4.44
704 1627 3.375299 GCACGAGGTCAGCTGATTATTTT 59.625 43.478 21.47 2.03 0.00 1.82
714 1637 2.811317 CGGAAGCACGAGGTCAGC 60.811 66.667 0.00 0.00 35.47 4.26
742 1676 2.853914 GCGTGAAGCTTCGTCCAC 59.146 61.111 21.11 13.14 44.04 4.02
775 1709 4.141801 TGGAACGGAGGGAGTATAATGTTG 60.142 45.833 0.00 0.00 0.00 3.33
776 1710 4.035112 TGGAACGGAGGGAGTATAATGTT 58.965 43.478 0.00 0.00 0.00 2.71
777 1711 3.649843 TGGAACGGAGGGAGTATAATGT 58.350 45.455 0.00 0.00 0.00 2.71
778 1712 4.682778 TTGGAACGGAGGGAGTATAATG 57.317 45.455 0.00 0.00 0.00 1.90
779 1713 5.703730 TTTTGGAACGGAGGGAGTATAAT 57.296 39.130 0.00 0.00 0.00 1.28
781 1715 6.138263 TCTATTTTGGAACGGAGGGAGTATA 58.862 40.000 0.00 0.00 0.00 1.47
782 1716 4.966805 TCTATTTTGGAACGGAGGGAGTAT 59.033 41.667 0.00 0.00 0.00 2.12
783 1717 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
784 1718 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
787 1721 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
789 1723 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
790 1724 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
793 1727 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
795 1729 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
796 1730 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
835 1769 9.804758 CTCCGTTCTAAAATAGATGACTTAACT 57.195 33.333 0.00 0.00 34.22 2.24
836 1770 9.032420 CCTCCGTTCTAAAATAGATGACTTAAC 57.968 37.037 0.00 0.00 34.22 2.01
837 1771 8.202137 CCCTCCGTTCTAAAATAGATGACTTAA 58.798 37.037 0.00 0.00 34.22 1.85
838 1772 7.562454 TCCCTCCGTTCTAAAATAGATGACTTA 59.438 37.037 0.00 0.00 34.22 2.24
839 1773 6.383147 TCCCTCCGTTCTAAAATAGATGACTT 59.617 38.462 0.00 0.00 34.22 3.01
840 1774 5.897824 TCCCTCCGTTCTAAAATAGATGACT 59.102 40.000 0.00 0.00 34.22 3.41
841 1775 6.158023 TCCCTCCGTTCTAAAATAGATGAC 57.842 41.667 0.00 0.00 34.22 3.06
842 1776 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
843 1777 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
844 1778 9.771140 ATATACTCCCTCCGTTCTAAAATAGAT 57.229 33.333 0.00 0.00 34.22 1.98
848 1782 9.377238 ACTTATATACTCCCTCCGTTCTAAAAT 57.623 33.333 0.00 0.00 0.00 1.82
849 1783 8.636213 CACTTATATACTCCCTCCGTTCTAAAA 58.364 37.037 0.00 0.00 0.00 1.52
850 1784 7.781693 ACACTTATATACTCCCTCCGTTCTAAA 59.218 37.037 0.00 0.00 0.00 1.85
851 1785 7.293073 ACACTTATATACTCCCTCCGTTCTAA 58.707 38.462 0.00 0.00 0.00 2.10
852 1786 6.845908 ACACTTATATACTCCCTCCGTTCTA 58.154 40.000 0.00 0.00 0.00 2.10
853 1787 5.703310 ACACTTATATACTCCCTCCGTTCT 58.297 41.667 0.00 0.00 0.00 3.01
854 1788 5.334724 CGACACTTATATACTCCCTCCGTTC 60.335 48.000 0.00 0.00 0.00 3.95
855 1789 4.518211 CGACACTTATATACTCCCTCCGTT 59.482 45.833 0.00 0.00 0.00 4.44
856 1790 4.070716 CGACACTTATATACTCCCTCCGT 58.929 47.826 0.00 0.00 0.00 4.69
857 1791 3.119919 GCGACACTTATATACTCCCTCCG 60.120 52.174 0.00 0.00 0.00 4.63
858 1792 3.825014 TGCGACACTTATATACTCCCTCC 59.175 47.826 0.00 0.00 0.00 4.30
859 1793 4.519730 AGTGCGACACTTATATACTCCCTC 59.480 45.833 6.67 0.00 42.59 4.30
860 1794 4.471548 AGTGCGACACTTATATACTCCCT 58.528 43.478 6.67 0.00 42.59 4.20
861 1795 4.850347 AGTGCGACACTTATATACTCCC 57.150 45.455 6.67 0.00 42.59 4.30
862 1796 6.372185 CAGTAGTGCGACACTTATATACTCC 58.628 44.000 15.81 0.00 42.59 3.85
863 1797 6.204301 TCCAGTAGTGCGACACTTATATACTC 59.796 42.308 15.81 1.39 42.59 2.59
864 1798 6.060136 TCCAGTAGTGCGACACTTATATACT 58.940 40.000 15.81 10.72 42.59 2.12
886 1820 0.676184 TGCTGCTATGTCGAGGATCC 59.324 55.000 2.48 2.48 0.00 3.36
894 1837 3.003068 CCTGTGCTATTTGCTGCTATGTC 59.997 47.826 0.00 0.00 43.37 3.06
897 1840 3.565764 TCCTGTGCTATTTGCTGCTAT 57.434 42.857 0.00 0.00 43.37 2.97
959 1902 2.357517 CTCGCCCTGTGTGTGGTC 60.358 66.667 0.00 0.00 0.00 4.02
961 1904 2.666190 CACTCGCCCTGTGTGTGG 60.666 66.667 2.78 0.00 37.32 4.17
973 1916 0.732571 GCCACTCTCTCTCTCACTCG 59.267 60.000 0.00 0.00 0.00 4.18
975 1918 1.354031 TCAGCCACTCTCTCTCTCACT 59.646 52.381 0.00 0.00 0.00 3.41
977 1920 2.224992 ACTTCAGCCACTCTCTCTCTCA 60.225 50.000 0.00 0.00 0.00 3.27
1035 1978 1.133823 TGCTGCTTGGGTTCTTCTTGA 60.134 47.619 0.00 0.00 0.00 3.02
1037 1980 1.322442 GTGCTGCTTGGGTTCTTCTT 58.678 50.000 0.00 0.00 0.00 2.52
1045 1988 0.393820 ACCATTTTGTGCTGCTTGGG 59.606 50.000 0.00 0.00 0.00 4.12
1047 1990 5.049167 TCTTTTACCATTTTGTGCTGCTTG 58.951 37.500 0.00 0.00 0.00 4.01
1079 2031 2.564947 GTGAAGATGGGTGTCTCACTCT 59.435 50.000 1.53 0.00 35.59 3.24
1080 2032 2.672478 CGTGAAGATGGGTGTCTCACTC 60.672 54.545 0.00 0.00 35.05 3.51
1081 2033 1.273606 CGTGAAGATGGGTGTCTCACT 59.726 52.381 0.00 0.00 34.40 3.41
1082 2034 1.000955 ACGTGAAGATGGGTGTCTCAC 59.999 52.381 0.00 0.00 0.00 3.51
1083 2035 1.338107 ACGTGAAGATGGGTGTCTCA 58.662 50.000 0.00 0.00 0.00 3.27
1084 2036 3.130516 TGATACGTGAAGATGGGTGTCTC 59.869 47.826 0.00 0.00 0.00 3.36
1085 2037 3.096852 TGATACGTGAAGATGGGTGTCT 58.903 45.455 0.00 0.00 0.00 3.41
1086 2038 3.448686 CTGATACGTGAAGATGGGTGTC 58.551 50.000 0.00 0.00 0.00 3.67
1087 2039 2.418746 GCTGATACGTGAAGATGGGTGT 60.419 50.000 0.00 0.00 0.00 4.16
1126 2078 5.468746 CGATGTTCTTGACTTTGTTAAGGGA 59.531 40.000 3.12 0.00 35.61 4.20
1269 2221 7.604927 GTCATTTGTCCACCTATACTGTTTACA 59.395 37.037 0.00 0.00 0.00 2.41
1270 2222 7.065443 GGTCATTTGTCCACCTATACTGTTTAC 59.935 40.741 0.00 0.00 0.00 2.01
1271 2223 7.107542 GGTCATTTGTCCACCTATACTGTTTA 58.892 38.462 0.00 0.00 0.00 2.01
1272 2224 5.944007 GGTCATTTGTCCACCTATACTGTTT 59.056 40.000 0.00 0.00 0.00 2.83
1273 2225 5.497474 GGTCATTTGTCCACCTATACTGTT 58.503 41.667 0.00 0.00 0.00 3.16
1274 2226 4.382685 CGGTCATTTGTCCACCTATACTGT 60.383 45.833 0.00 0.00 0.00 3.55
1275 2227 4.119862 CGGTCATTTGTCCACCTATACTG 58.880 47.826 0.00 0.00 0.00 2.74
1276 2228 3.773119 ACGGTCATTTGTCCACCTATACT 59.227 43.478 0.00 0.00 0.00 2.12
1277 2229 4.117685 GACGGTCATTTGTCCACCTATAC 58.882 47.826 2.62 0.00 0.00 1.47
1278 2230 3.181484 CGACGGTCATTTGTCCACCTATA 60.181 47.826 9.10 0.00 0.00 1.31
1279 2231 2.418197 CGACGGTCATTTGTCCACCTAT 60.418 50.000 9.10 0.00 0.00 2.57
1280 2232 1.067425 CGACGGTCATTTGTCCACCTA 60.067 52.381 9.10 0.00 0.00 3.08
1281 2233 0.320421 CGACGGTCATTTGTCCACCT 60.320 55.000 9.10 0.00 0.00 4.00
1282 2234 0.320073 TCGACGGTCATTTGTCCACC 60.320 55.000 9.10 0.00 0.00 4.61
1283 2235 1.722011 ATCGACGGTCATTTGTCCAC 58.278 50.000 9.10 0.00 0.00 4.02
1284 2236 3.517602 CTTATCGACGGTCATTTGTCCA 58.482 45.455 9.10 0.00 0.00 4.02
1285 2237 2.284417 GCTTATCGACGGTCATTTGTCC 59.716 50.000 9.10 0.00 0.00 4.02
1286 2238 2.284417 GGCTTATCGACGGTCATTTGTC 59.716 50.000 9.10 0.00 0.00 3.18
1287 2239 2.093658 AGGCTTATCGACGGTCATTTGT 60.094 45.455 9.10 0.00 0.00 2.83
1288 2240 2.550978 AGGCTTATCGACGGTCATTTG 58.449 47.619 9.10 0.00 0.00 2.32
1289 2241 2.981859 AGGCTTATCGACGGTCATTT 57.018 45.000 9.10 0.00 0.00 2.32
1290 2242 3.306088 CCATAGGCTTATCGACGGTCATT 60.306 47.826 9.10 0.00 0.00 2.57
1291 2243 2.231478 CCATAGGCTTATCGACGGTCAT 59.769 50.000 9.10 3.94 0.00 3.06
1292 2244 1.611977 CCATAGGCTTATCGACGGTCA 59.388 52.381 9.10 0.00 0.00 4.02
1293 2245 1.884579 TCCATAGGCTTATCGACGGTC 59.115 52.381 0.00 0.00 0.00 4.79
1294 2246 1.612463 GTCCATAGGCTTATCGACGGT 59.388 52.381 0.00 0.00 0.00 4.83
1295 2247 1.401148 CGTCCATAGGCTTATCGACGG 60.401 57.143 22.39 5.97 43.04 4.79
1296 2248 1.534163 TCGTCCATAGGCTTATCGACG 59.466 52.381 23.56 23.56 45.96 5.12
1297 2249 3.566523 CTTCGTCCATAGGCTTATCGAC 58.433 50.000 3.88 3.88 0.00 4.20
1298 2250 2.557056 CCTTCGTCCATAGGCTTATCGA 59.443 50.000 0.00 0.00 0.00 3.59
1299 2251 2.352814 CCCTTCGTCCATAGGCTTATCG 60.353 54.545 0.00 0.00 0.00 2.92
1328 2280 1.938577 CATGCAGACCACTACAGATGC 59.061 52.381 0.00 0.00 0.00 3.91
1357 2309 4.142160 GGCCGATCTTGCTTTATTTTTCCT 60.142 41.667 0.00 0.00 0.00 3.36
1413 2365 6.038714 CCCCTCAGCTGAATATTTTGTAGAAC 59.961 42.308 18.85 0.00 0.00 3.01
1446 2398 5.394738 TCGAGATCCCTTATACACTCCAAT 58.605 41.667 0.00 0.00 0.00 3.16
1485 2437 1.757118 TGACCAAAGAGGAGGCTATCG 59.243 52.381 0.00 0.00 41.22 2.92
1548 2500 3.817238 ACATGGACGCGTACAAATTTTC 58.183 40.909 30.63 3.94 0.00 2.29
1563 2515 9.551734 CATTCAAGATCAGAAGTTATACATGGA 57.448 33.333 0.00 0.00 0.00 3.41
1564 2516 9.334947 ACATTCAAGATCAGAAGTTATACATGG 57.665 33.333 0.00 0.00 0.00 3.66
1573 2525 7.323420 TGACGATTACATTCAAGATCAGAAGT 58.677 34.615 0.00 2.68 0.00 3.01
1590 2542 7.547722 ACACACATTGCTAAGTAATGACGATTA 59.452 33.333 13.58 0.00 37.73 1.75
1591 2543 6.371548 ACACACATTGCTAAGTAATGACGATT 59.628 34.615 13.58 0.00 37.73 3.34
1593 2545 5.120053 CACACACATTGCTAAGTAATGACGA 59.880 40.000 13.58 0.00 37.73 4.20
1594 2546 5.107104 ACACACACATTGCTAAGTAATGACG 60.107 40.000 13.58 7.57 37.73 4.35
1595 2547 6.079763 CACACACACATTGCTAAGTAATGAC 58.920 40.000 13.58 0.00 37.73 3.06
1596 2548 5.762711 ACACACACACATTGCTAAGTAATGA 59.237 36.000 13.58 0.00 37.73 2.57
1597 2549 5.852755 CACACACACACATTGCTAAGTAATG 59.147 40.000 6.57 6.57 40.50 1.90
1598 2550 5.530915 ACACACACACACATTGCTAAGTAAT 59.469 36.000 0.00 0.00 0.00 1.89
1601 2553 3.065233 CACACACACACACATTGCTAAGT 59.935 43.478 0.00 0.00 0.00 2.24
1602 2554 3.065233 ACACACACACACACATTGCTAAG 59.935 43.478 0.00 0.00 0.00 2.18
1603 2555 3.013219 ACACACACACACACATTGCTAA 58.987 40.909 0.00 0.00 0.00 3.09
1604 2556 2.354199 CACACACACACACACATTGCTA 59.646 45.455 0.00 0.00 0.00 3.49
1605 2557 1.132834 CACACACACACACACATTGCT 59.867 47.619 0.00 0.00 0.00 3.91
1606 2558 1.135431 ACACACACACACACACATTGC 60.135 47.619 0.00 0.00 0.00 3.56
1607 2559 2.161211 TGACACACACACACACACATTG 59.839 45.455 0.00 0.00 0.00 2.82
1608 2560 2.419673 CTGACACACACACACACACATT 59.580 45.455 0.00 0.00 0.00 2.71
1609 2561 2.009051 CTGACACACACACACACACAT 58.991 47.619 0.00 0.00 0.00 3.21
1610 2562 1.001406 TCTGACACACACACACACACA 59.999 47.619 0.00 0.00 0.00 3.72
1612 2564 2.689553 ATCTGACACACACACACACA 57.310 45.000 0.00 0.00 0.00 3.72
1613 2565 5.443261 CATAAATCTGACACACACACACAC 58.557 41.667 0.00 0.00 0.00 3.82
1614 2566 4.024133 GCATAAATCTGACACACACACACA 60.024 41.667 0.00 0.00 0.00 3.72
1615 2567 4.466828 GCATAAATCTGACACACACACAC 58.533 43.478 0.00 0.00 0.00 3.82
1657 2609 2.095252 GTCGGCAGCGAGGTTTCTC 61.095 63.158 0.00 0.00 36.69 2.87
1760 2712 8.613060 ATCTTCGCTTGATGTTACATATTGAT 57.387 30.769 0.00 0.00 0.00 2.57
1771 2723 3.812053 GCAGGATAATCTTCGCTTGATGT 59.188 43.478 0.00 0.00 0.00 3.06
1775 2727 2.289002 GTGGCAGGATAATCTTCGCTTG 59.711 50.000 0.00 0.00 0.00 4.01
1781 2733 5.709164 GCAATATGAGTGGCAGGATAATCTT 59.291 40.000 0.00 0.00 0.00 2.40
1782 2734 5.251764 GCAATATGAGTGGCAGGATAATCT 58.748 41.667 0.00 0.00 0.00 2.40
1783 2735 4.093998 CGCAATATGAGTGGCAGGATAATC 59.906 45.833 0.00 0.00 0.00 1.75
1784 2736 4.005650 CGCAATATGAGTGGCAGGATAAT 58.994 43.478 0.00 0.00 0.00 1.28
1785 2737 3.181455 ACGCAATATGAGTGGCAGGATAA 60.181 43.478 0.00 0.00 0.00 1.75
1786 2738 2.368548 ACGCAATATGAGTGGCAGGATA 59.631 45.455 0.00 0.00 0.00 2.59
1787 2739 1.141657 ACGCAATATGAGTGGCAGGAT 59.858 47.619 0.00 0.00 0.00 3.24
1788 2740 0.541392 ACGCAATATGAGTGGCAGGA 59.459 50.000 0.00 0.00 0.00 3.86
1789 2741 0.659427 CACGCAATATGAGTGGCAGG 59.341 55.000 6.36 0.00 43.08 4.85
1790 2742 1.655484 TCACGCAATATGAGTGGCAG 58.345 50.000 13.03 0.00 46.07 4.85
1791 2743 2.106477 TTCACGCAATATGAGTGGCA 57.894 45.000 13.03 0.00 46.07 4.92
1792 2744 3.171277 GTTTTCACGCAATATGAGTGGC 58.829 45.455 13.03 0.72 46.07 5.01
1793 2745 3.440173 AGGTTTTCACGCAATATGAGTGG 59.560 43.478 13.03 0.00 46.07 4.00
1795 2747 3.689649 GGAGGTTTTCACGCAATATGAGT 59.310 43.478 0.00 0.00 0.00 3.41
1796 2748 3.242413 CGGAGGTTTTCACGCAATATGAG 60.242 47.826 0.00 0.00 0.00 2.90
1797 2749 2.675844 CGGAGGTTTTCACGCAATATGA 59.324 45.455 0.00 0.00 0.00 2.15
1798 2750 2.418628 ACGGAGGTTTTCACGCAATATG 59.581 45.455 0.00 0.00 0.00 1.78
1799 2751 2.418628 CACGGAGGTTTTCACGCAATAT 59.581 45.455 0.00 0.00 0.00 1.28
1800 2752 1.801771 CACGGAGGTTTTCACGCAATA 59.198 47.619 0.00 0.00 0.00 1.90
1801 2753 0.591170 CACGGAGGTTTTCACGCAAT 59.409 50.000 0.00 0.00 0.00 3.56
1802 2754 1.440938 CCACGGAGGTTTTCACGCAA 61.441 55.000 0.00 0.00 0.00 4.85
1803 2755 1.890041 CCACGGAGGTTTTCACGCA 60.890 57.895 0.00 0.00 0.00 5.24
1804 2756 2.943653 CCACGGAGGTTTTCACGC 59.056 61.111 0.00 0.00 0.00 5.34
1805 2757 2.613506 GGCCACGGAGGTTTTCACG 61.614 63.158 0.00 0.00 40.61 4.35
1806 2758 1.527380 TGGCCACGGAGGTTTTCAC 60.527 57.895 0.00 0.00 40.61 3.18
1807 2759 1.527380 GTGGCCACGGAGGTTTTCA 60.527 57.895 22.49 0.00 40.61 2.69
1808 2760 2.265904 GGTGGCCACGGAGGTTTTC 61.266 63.158 29.08 8.51 40.61 2.29
1809 2761 2.203437 GGTGGCCACGGAGGTTTT 60.203 61.111 29.08 0.00 40.61 2.43
1810 2762 3.491598 CTGGTGGCCACGGAGGTTT 62.492 63.158 29.08 0.00 40.61 3.27
1811 2763 3.953775 CTGGTGGCCACGGAGGTT 61.954 66.667 29.08 0.00 40.61 3.50
1814 2766 4.767255 GAGCTGGTGGCCACGGAG 62.767 72.222 29.08 25.75 43.05 4.63
1817 2769 4.641645 TTGGAGCTGGTGGCCACG 62.642 66.667 29.08 17.63 43.05 4.94
1818 2770 2.985847 GTTGGAGCTGGTGGCCAC 60.986 66.667 28.57 28.57 43.05 5.01
1819 2771 4.284550 GGTTGGAGCTGGTGGCCA 62.285 66.667 0.00 0.00 43.05 5.36
1823 2775 3.583276 TACGCGGTTGGAGCTGGTG 62.583 63.158 12.47 0.00 0.00 4.17
1824 2776 3.307906 TACGCGGTTGGAGCTGGT 61.308 61.111 12.47 0.00 0.00 4.00
1825 2777 2.813908 GTACGCGGTTGGAGCTGG 60.814 66.667 12.47 0.00 0.00 4.85
1826 2778 2.048597 TGTACGCGGTTGGAGCTG 60.049 61.111 12.47 0.00 0.00 4.24
1827 2779 2.048503 GTGTACGCGGTTGGAGCT 60.049 61.111 12.47 0.00 0.00 4.09
1828 2780 2.356553 TGTGTACGCGGTTGGAGC 60.357 61.111 12.47 0.00 0.00 4.70
1829 2781 2.025418 GGTGTGTACGCGGTTGGAG 61.025 63.158 12.47 0.00 0.00 3.86
1830 2782 2.029369 GGTGTGTACGCGGTTGGA 59.971 61.111 12.47 0.00 0.00 3.53
1831 2783 3.408020 CGGTGTGTACGCGGTTGG 61.408 66.667 12.47 0.00 0.00 3.77
1838 2790 3.282428 GTTGTTTAAAGCGGTGTGTACG 58.718 45.455 0.00 0.00 0.00 3.67
1839 2791 3.282428 CGTTGTTTAAAGCGGTGTGTAC 58.718 45.455 0.00 0.00 0.00 2.90
1840 2792 2.287373 CCGTTGTTTAAAGCGGTGTGTA 59.713 45.455 14.18 0.00 39.41 2.90
1841 2793 1.064357 CCGTTGTTTAAAGCGGTGTGT 59.936 47.619 14.18 0.00 39.41 3.72
1842 2794 1.749153 CCGTTGTTTAAAGCGGTGTG 58.251 50.000 14.18 0.00 39.41 3.82
1847 2799 4.988708 TTACCTACCGTTGTTTAAAGCG 57.011 40.909 0.00 0.00 0.00 4.68
1848 2800 6.901265 TGAATTACCTACCGTTGTTTAAAGC 58.099 36.000 0.00 0.00 0.00 3.51
1849 2801 9.977762 GTATGAATTACCTACCGTTGTTTAAAG 57.022 33.333 0.00 0.00 0.00 1.85
1850 2802 8.655092 CGTATGAATTACCTACCGTTGTTTAAA 58.345 33.333 0.00 0.00 0.00 1.52
1851 2803 7.277539 CCGTATGAATTACCTACCGTTGTTTAA 59.722 37.037 0.00 0.00 0.00 1.52
1852 2804 6.756074 CCGTATGAATTACCTACCGTTGTTTA 59.244 38.462 0.00 0.00 0.00 2.01
1853 2805 5.581874 CCGTATGAATTACCTACCGTTGTTT 59.418 40.000 0.00 0.00 0.00 2.83
1854 2806 5.111293 CCGTATGAATTACCTACCGTTGTT 58.889 41.667 0.00 0.00 0.00 2.83
1855 2807 4.160252 ACCGTATGAATTACCTACCGTTGT 59.840 41.667 0.00 0.00 0.00 3.32
1856 2808 4.685924 ACCGTATGAATTACCTACCGTTG 58.314 43.478 0.00 0.00 0.00 4.10
1857 2809 4.402155 TGACCGTATGAATTACCTACCGTT 59.598 41.667 0.00 0.00 0.00 4.44
1858 2810 3.953612 TGACCGTATGAATTACCTACCGT 59.046 43.478 0.00 0.00 0.00 4.83
1859 2811 4.037208 AGTGACCGTATGAATTACCTACCG 59.963 45.833 0.00 0.00 0.00 4.02
1860 2812 5.526506 AGTGACCGTATGAATTACCTACC 57.473 43.478 0.00 0.00 0.00 3.18
1861 2813 6.803642 AGAAGTGACCGTATGAATTACCTAC 58.196 40.000 0.00 0.00 0.00 3.18
1862 2814 7.414222 AAGAAGTGACCGTATGAATTACCTA 57.586 36.000 0.00 0.00 0.00 3.08
1863 2815 5.934402 AGAAGTGACCGTATGAATTACCT 57.066 39.130 0.00 0.00 0.00 3.08
1864 2816 5.231568 CGAAGAAGTGACCGTATGAATTACC 59.768 44.000 0.00 0.00 0.00 2.85
1865 2817 5.231568 CCGAAGAAGTGACCGTATGAATTAC 59.768 44.000 0.00 0.00 0.00 1.89
1866 2818 5.105635 ACCGAAGAAGTGACCGTATGAATTA 60.106 40.000 0.00 0.00 0.00 1.40
1867 2819 4.181578 CCGAAGAAGTGACCGTATGAATT 58.818 43.478 0.00 0.00 0.00 2.17
1868 2820 3.194968 ACCGAAGAAGTGACCGTATGAAT 59.805 43.478 0.00 0.00 0.00 2.57
1869 2821 2.559668 ACCGAAGAAGTGACCGTATGAA 59.440 45.455 0.00 0.00 0.00 2.57
1870 2822 2.165167 ACCGAAGAAGTGACCGTATGA 58.835 47.619 0.00 0.00 0.00 2.15
1871 2823 2.649331 ACCGAAGAAGTGACCGTATG 57.351 50.000 0.00 0.00 0.00 2.39
1872 2824 3.084039 TGTACCGAAGAAGTGACCGTAT 58.916 45.455 0.00 0.00 0.00 3.06
1873 2825 2.503331 TGTACCGAAGAAGTGACCGTA 58.497 47.619 0.00 0.00 0.00 4.02
1874 2826 1.321474 TGTACCGAAGAAGTGACCGT 58.679 50.000 0.00 0.00 0.00 4.83
1875 2827 2.056577 GTTGTACCGAAGAAGTGACCG 58.943 52.381 0.00 0.00 0.00 4.79
1876 2828 2.410939 GGTTGTACCGAAGAAGTGACC 58.589 52.381 0.00 0.00 0.00 4.02
1877 2829 2.410939 GGGTTGTACCGAAGAAGTGAC 58.589 52.381 0.00 0.00 39.83 3.67
1878 2830 1.345415 GGGGTTGTACCGAAGAAGTGA 59.655 52.381 0.00 0.00 39.83 3.41
1879 2831 1.346722 AGGGGTTGTACCGAAGAAGTG 59.653 52.381 0.00 0.00 39.83 3.16
1880 2832 1.725803 AGGGGTTGTACCGAAGAAGT 58.274 50.000 0.00 0.00 39.83 3.01
1881 2833 3.967332 TTAGGGGTTGTACCGAAGAAG 57.033 47.619 0.00 0.00 39.83 2.85
1882 2834 3.390639 TGTTTAGGGGTTGTACCGAAGAA 59.609 43.478 0.00 0.00 39.83 2.52
1883 2835 2.971330 TGTTTAGGGGTTGTACCGAAGA 59.029 45.455 0.00 0.00 39.83 2.87
1884 2836 3.069289 GTGTTTAGGGGTTGTACCGAAG 58.931 50.000 0.00 0.00 39.83 3.79
1885 2837 2.437281 TGTGTTTAGGGGTTGTACCGAA 59.563 45.455 0.00 0.00 39.83 4.30
1886 2838 2.045524 TGTGTTTAGGGGTTGTACCGA 58.954 47.619 0.00 0.00 39.83 4.69
1887 2839 2.547299 TGTGTTTAGGGGTTGTACCG 57.453 50.000 0.00 0.00 39.83 4.02
1888 2840 4.023726 TGATGTGTTTAGGGGTTGTACC 57.976 45.455 0.00 0.00 37.60 3.34
1889 2841 5.048991 CAGTTGATGTGTTTAGGGGTTGTAC 60.049 44.000 0.00 0.00 0.00 2.90
1890 2842 5.067273 CAGTTGATGTGTTTAGGGGTTGTA 58.933 41.667 0.00 0.00 0.00 2.41
1891 2843 3.888930 CAGTTGATGTGTTTAGGGGTTGT 59.111 43.478 0.00 0.00 0.00 3.32
1892 2844 3.255642 CCAGTTGATGTGTTTAGGGGTTG 59.744 47.826 0.00 0.00 0.00 3.77
1893 2845 3.496331 CCAGTTGATGTGTTTAGGGGTT 58.504 45.455 0.00 0.00 0.00 4.11
1894 2846 2.817839 GCCAGTTGATGTGTTTAGGGGT 60.818 50.000 0.00 0.00 0.00 4.95
1895 2847 1.818674 GCCAGTTGATGTGTTTAGGGG 59.181 52.381 0.00 0.00 0.00 4.79
1896 2848 1.818674 GGCCAGTTGATGTGTTTAGGG 59.181 52.381 0.00 0.00 0.00 3.53
1897 2849 1.818674 GGGCCAGTTGATGTGTTTAGG 59.181 52.381 4.39 0.00 0.00 2.69
1898 2850 1.468520 CGGGCCAGTTGATGTGTTTAG 59.531 52.381 4.39 0.00 0.00 1.85
1899 2851 1.529226 CGGGCCAGTTGATGTGTTTA 58.471 50.000 4.39 0.00 0.00 2.01
1900 2852 1.178534 CCGGGCCAGTTGATGTGTTT 61.179 55.000 4.39 0.00 0.00 2.83
1901 2853 1.603455 CCGGGCCAGTTGATGTGTT 60.603 57.895 4.39 0.00 0.00 3.32
1902 2854 2.034066 CCGGGCCAGTTGATGTGT 59.966 61.111 4.39 0.00 0.00 3.72
1903 2855 2.034066 ACCGGGCCAGTTGATGTG 59.966 61.111 6.32 0.00 0.00 3.21
1904 2856 2.063015 TTGACCGGGCCAGTTGATGT 62.063 55.000 3.83 0.00 0.00 3.06
1905 2857 1.303236 TTGACCGGGCCAGTTGATG 60.303 57.895 3.83 0.00 0.00 3.07
1906 2858 1.303317 GTTGACCGGGCCAGTTGAT 60.303 57.895 3.83 0.00 0.00 2.57
1907 2859 2.112297 GTTGACCGGGCCAGTTGA 59.888 61.111 3.83 0.00 0.00 3.18
1908 2860 2.113139 AGTTGACCGGGCCAGTTG 59.887 61.111 3.83 0.00 0.00 3.16
1909 2861 2.113139 CAGTTGACCGGGCCAGTT 59.887 61.111 3.83 0.00 0.00 3.16
1910 2862 3.953775 CCAGTTGACCGGGCCAGT 61.954 66.667 3.83 0.00 0.00 4.00
1915 2867 3.901797 GACTGGCCAGTTGACCGGG 62.902 68.421 37.98 10.74 42.66 5.73
1916 2868 1.541310 TAGACTGGCCAGTTGACCGG 61.541 60.000 37.98 11.54 42.66 5.28
1917 2869 0.108615 CTAGACTGGCCAGTTGACCG 60.109 60.000 37.98 20.59 42.66 4.79
1918 2870 0.977395 ACTAGACTGGCCAGTTGACC 59.023 55.000 37.98 25.06 42.66 4.02
1919 2871 3.955650 TTACTAGACTGGCCAGTTGAC 57.044 47.619 37.98 25.42 42.66 3.18
1920 2872 5.245531 CAATTTACTAGACTGGCCAGTTGA 58.754 41.667 37.98 26.47 42.66 3.18
1921 2873 4.396166 CCAATTTACTAGACTGGCCAGTTG 59.604 45.833 37.98 29.65 42.66 3.16
1922 2874 4.288626 TCCAATTTACTAGACTGGCCAGTT 59.711 41.667 37.98 27.52 42.66 3.16
1923 2875 3.844211 TCCAATTTACTAGACTGGCCAGT 59.156 43.478 38.42 38.42 45.84 4.00
1924 2876 4.192317 GTCCAATTTACTAGACTGGCCAG 58.808 47.826 31.60 31.60 0.00 4.85
1925 2877 3.585289 TGTCCAATTTACTAGACTGGCCA 59.415 43.478 4.71 4.71 0.00 5.36
1926 2878 4.216411 TGTCCAATTTACTAGACTGGCC 57.784 45.455 0.00 0.00 0.00 5.36
1927 2879 4.576463 CCATGTCCAATTTACTAGACTGGC 59.424 45.833 0.00 0.00 0.00 4.85
1928 2880 5.989477 TCCATGTCCAATTTACTAGACTGG 58.011 41.667 0.00 0.00 32.99 4.00
1929 2881 7.390440 TGTTTCCATGTCCAATTTACTAGACTG 59.610 37.037 0.00 0.00 0.00 3.51
1930 2882 7.458397 TGTTTCCATGTCCAATTTACTAGACT 58.542 34.615 0.00 0.00 0.00 3.24
1931 2883 7.148239 CCTGTTTCCATGTCCAATTTACTAGAC 60.148 40.741 0.00 0.00 0.00 2.59
1932 2884 6.884295 CCTGTTTCCATGTCCAATTTACTAGA 59.116 38.462 0.00 0.00 0.00 2.43
1933 2885 6.095440 CCCTGTTTCCATGTCCAATTTACTAG 59.905 42.308 0.00 0.00 0.00 2.57
1934 2886 5.949354 CCCTGTTTCCATGTCCAATTTACTA 59.051 40.000 0.00 0.00 0.00 1.82
1935 2887 4.772100 CCCTGTTTCCATGTCCAATTTACT 59.228 41.667 0.00 0.00 0.00 2.24
1936 2888 4.526650 ACCCTGTTTCCATGTCCAATTTAC 59.473 41.667 0.00 0.00 0.00 2.01
1937 2889 4.746466 ACCCTGTTTCCATGTCCAATTTA 58.254 39.130 0.00 0.00 0.00 1.40
1938 2890 3.586429 ACCCTGTTTCCATGTCCAATTT 58.414 40.909 0.00 0.00 0.00 1.82
1939 2891 3.258722 ACCCTGTTTCCATGTCCAATT 57.741 42.857 0.00 0.00 0.00 2.32
1940 2892 2.999185 ACCCTGTTTCCATGTCCAAT 57.001 45.000 0.00 0.00 0.00 3.16
1941 2893 2.765689 AACCCTGTTTCCATGTCCAA 57.234 45.000 0.00 0.00 0.00 3.53
1942 2894 2.697751 CAAAACCCTGTTTCCATGTCCA 59.302 45.455 0.00 0.00 0.00 4.02
1943 2895 2.962421 TCAAAACCCTGTTTCCATGTCC 59.038 45.455 0.00 0.00 0.00 4.02
1944 2896 4.871933 ATCAAAACCCTGTTTCCATGTC 57.128 40.909 0.00 0.00 0.00 3.06
1945 2897 4.261994 CGAATCAAAACCCTGTTTCCATGT 60.262 41.667 0.00 0.00 0.00 3.21
1946 2898 4.236935 CGAATCAAAACCCTGTTTCCATG 58.763 43.478 0.00 0.00 0.00 3.66
1947 2899 3.258123 CCGAATCAAAACCCTGTTTCCAT 59.742 43.478 0.00 0.00 0.00 3.41
1948 2900 2.625790 CCGAATCAAAACCCTGTTTCCA 59.374 45.455 0.00 0.00 0.00 3.53
1949 2901 2.029380 CCCGAATCAAAACCCTGTTTCC 60.029 50.000 0.00 0.00 0.00 3.13
1950 2902 2.888414 TCCCGAATCAAAACCCTGTTTC 59.112 45.455 0.00 0.00 0.00 2.78
1951 2903 2.952116 TCCCGAATCAAAACCCTGTTT 58.048 42.857 0.00 0.00 0.00 2.83
1952 2904 2.668144 TCCCGAATCAAAACCCTGTT 57.332 45.000 0.00 0.00 0.00 3.16
1953 2905 2.899303 ATCCCGAATCAAAACCCTGT 57.101 45.000 0.00 0.00 0.00 4.00
1954 2906 3.886123 AGTATCCCGAATCAAAACCCTG 58.114 45.455 0.00 0.00 0.00 4.45
1955 2907 4.586306 AAGTATCCCGAATCAAAACCCT 57.414 40.909 0.00 0.00 0.00 4.34
1956 2908 4.201881 CGAAAGTATCCCGAATCAAAACCC 60.202 45.833 0.00 0.00 0.00 4.11
1957 2909 4.393990 ACGAAAGTATCCCGAATCAAAACC 59.606 41.667 0.00 0.00 46.88 3.27
1958 2910 5.541098 ACGAAAGTATCCCGAATCAAAAC 57.459 39.130 0.00 0.00 46.88 2.43
1974 2926 2.664916 CAACATCCAAGGCAACGAAAG 58.335 47.619 0.00 0.00 46.39 2.62
1975 2927 1.269517 GCAACATCCAAGGCAACGAAA 60.270 47.619 0.00 0.00 46.39 3.46
1976 2928 0.313672 GCAACATCCAAGGCAACGAA 59.686 50.000 0.00 0.00 46.39 3.85
1977 2929 0.537143 AGCAACATCCAAGGCAACGA 60.537 50.000 0.00 0.00 46.39 3.85
1978 2930 0.387622 CAGCAACATCCAAGGCAACG 60.388 55.000 0.00 0.00 46.39 4.10
1979 2931 0.668401 GCAGCAACATCCAAGGCAAC 60.668 55.000 0.00 0.00 0.00 4.17
1980 2932 1.667151 GCAGCAACATCCAAGGCAA 59.333 52.632 0.00 0.00 0.00 4.52
1981 2933 2.277591 GGCAGCAACATCCAAGGCA 61.278 57.895 0.00 0.00 0.00 4.75
1982 2934 1.610554 ATGGCAGCAACATCCAAGGC 61.611 55.000 0.00 0.00 33.04 4.35
1983 2935 0.899720 AATGGCAGCAACATCCAAGG 59.100 50.000 0.00 0.00 33.04 3.61
1984 2936 5.518848 TTATAATGGCAGCAACATCCAAG 57.481 39.130 0.00 0.00 33.04 3.61
1985 2937 5.186603 TGTTTATAATGGCAGCAACATCCAA 59.813 36.000 0.00 0.00 33.04 3.53
1986 2938 4.708909 TGTTTATAATGGCAGCAACATCCA 59.291 37.500 0.00 0.00 0.00 3.41
1987 2939 5.261209 TGTTTATAATGGCAGCAACATCC 57.739 39.130 0.00 0.00 0.00 3.51
1988 2940 6.421801 GGAATGTTTATAATGGCAGCAACATC 59.578 38.462 5.69 1.63 34.52 3.06
1989 2941 6.098695 AGGAATGTTTATAATGGCAGCAACAT 59.901 34.615 0.00 0.00 36.61 2.71
1990 2942 5.421693 AGGAATGTTTATAATGGCAGCAACA 59.578 36.000 0.00 0.00 0.00 3.33
1991 2943 5.906073 AGGAATGTTTATAATGGCAGCAAC 58.094 37.500 0.00 0.00 0.00 4.17
1992 2944 7.039784 GGATAGGAATGTTTATAATGGCAGCAA 60.040 37.037 0.00 0.00 0.00 3.91
1993 2945 6.434028 GGATAGGAATGTTTATAATGGCAGCA 59.566 38.462 0.00 0.00 0.00 4.41
1994 2946 6.403636 CGGATAGGAATGTTTATAATGGCAGC 60.404 42.308 0.00 0.00 0.00 5.25
1995 2947 7.076842 CGGATAGGAATGTTTATAATGGCAG 57.923 40.000 0.00 0.00 0.00 4.85
2327 3279 2.487265 GCCCGATCTATCAAACACCCAT 60.487 50.000 0.00 0.00 0.00 4.00
2328 3280 1.134220 GCCCGATCTATCAAACACCCA 60.134 52.381 0.00 0.00 0.00 4.51
2329 3281 1.134220 TGCCCGATCTATCAAACACCC 60.134 52.381 0.00 0.00 0.00 4.61
2330 3282 2.325583 TGCCCGATCTATCAAACACC 57.674 50.000 0.00 0.00 0.00 4.16
2331 3283 3.270877 AGTTGCCCGATCTATCAAACAC 58.729 45.455 0.00 0.00 0.00 3.32
2332 3284 3.627395 AGTTGCCCGATCTATCAAACA 57.373 42.857 0.00 0.00 0.00 2.83
2333 3285 4.270325 GTGTAGTTGCCCGATCTATCAAAC 59.730 45.833 0.00 0.00 0.00 2.93
2334 3286 4.161565 AGTGTAGTTGCCCGATCTATCAAA 59.838 41.667 0.00 0.00 0.00 2.69
2335 3287 3.704566 AGTGTAGTTGCCCGATCTATCAA 59.295 43.478 0.00 0.00 0.00 2.57
2336 3288 3.068165 CAGTGTAGTTGCCCGATCTATCA 59.932 47.826 0.00 0.00 0.00 2.15
2337 3289 3.068307 ACAGTGTAGTTGCCCGATCTATC 59.932 47.826 0.00 0.00 0.00 2.08
2338 3290 3.031736 ACAGTGTAGTTGCCCGATCTAT 58.968 45.455 0.00 0.00 0.00 1.98
2339 3291 2.165641 CACAGTGTAGTTGCCCGATCTA 59.834 50.000 0.00 0.00 0.00 1.98
2340 3292 1.066858 CACAGTGTAGTTGCCCGATCT 60.067 52.381 0.00 0.00 0.00 2.75
2341 3293 1.067142 TCACAGTGTAGTTGCCCGATC 60.067 52.381 0.00 0.00 0.00 3.69
2342 3294 0.973632 TCACAGTGTAGTTGCCCGAT 59.026 50.000 0.00 0.00 0.00 4.18
2343 3295 0.753867 TTCACAGTGTAGTTGCCCGA 59.246 50.000 0.00 0.00 0.00 5.14
2344 3296 1.148310 CTTCACAGTGTAGTTGCCCG 58.852 55.000 0.00 0.00 0.00 6.13
2345 3297 2.143925 GTCTTCACAGTGTAGTTGCCC 58.856 52.381 7.04 0.00 0.00 5.36
2346 3298 1.792949 CGTCTTCACAGTGTAGTTGCC 59.207 52.381 7.04 0.00 0.00 4.52
2347 3299 1.792949 CCGTCTTCACAGTGTAGTTGC 59.207 52.381 7.04 0.00 0.00 4.17
2348 3300 1.792949 GCCGTCTTCACAGTGTAGTTG 59.207 52.381 7.04 1.81 0.00 3.16
2349 3301 1.602165 CGCCGTCTTCACAGTGTAGTT 60.602 52.381 7.04 0.00 0.00 2.24
2350 3302 0.039437 CGCCGTCTTCACAGTGTAGT 60.039 55.000 7.04 0.00 0.00 2.73
2351 3303 0.039437 ACGCCGTCTTCACAGTGTAG 60.039 55.000 0.00 0.00 0.00 2.74
2352 3304 1.069022 GTACGCCGTCTTCACAGTGTA 60.069 52.381 0.00 0.00 0.00 2.90
2353 3305 0.318445 GTACGCCGTCTTCACAGTGT 60.318 55.000 0.00 0.00 0.00 3.55
2354 3306 1.007336 GGTACGCCGTCTTCACAGTG 61.007 60.000 0.00 0.00 0.00 3.66
2355 3307 1.288127 GGTACGCCGTCTTCACAGT 59.712 57.895 0.00 0.00 0.00 3.55
2356 3308 4.164252 GGTACGCCGTCTTCACAG 57.836 61.111 0.00 0.00 0.00 3.66
2369 3321 0.108756 GAGTCACAAGAGCCCGGTAC 60.109 60.000 0.00 0.00 0.00 3.34
2370 3322 0.541063 TGAGTCACAAGAGCCCGGTA 60.541 55.000 0.00 0.00 0.00 4.02
2371 3323 1.821061 CTGAGTCACAAGAGCCCGGT 61.821 60.000 0.00 0.00 0.00 5.28
2372 3324 1.079543 CTGAGTCACAAGAGCCCGG 60.080 63.158 0.00 0.00 0.00 5.73
2373 3325 0.318441 TTCTGAGTCACAAGAGCCCG 59.682 55.000 0.00 0.00 0.00 6.13
2374 3326 2.037772 TCTTTCTGAGTCACAAGAGCCC 59.962 50.000 6.07 0.00 0.00 5.19
2375 3327 3.324993 CTCTTTCTGAGTCACAAGAGCC 58.675 50.000 18.28 0.00 37.99 4.70
2376 3328 2.736192 GCTCTTTCTGAGTCACAAGAGC 59.264 50.000 29.63 29.63 44.30 4.09
2377 3329 3.987547 TGCTCTTTCTGAGTCACAAGAG 58.012 45.455 22.67 22.67 44.41 2.85
2378 3330 4.406648 TTGCTCTTTCTGAGTCACAAGA 57.593 40.909 8.93 8.93 44.41 3.02
2379 3331 5.686159 AATTGCTCTTTCTGAGTCACAAG 57.314 39.130 0.00 0.00 44.41 3.16
2380 3332 5.180117 GCTAATTGCTCTTTCTGAGTCACAA 59.820 40.000 0.00 0.00 44.41 3.33
2381 3333 4.692625 GCTAATTGCTCTTTCTGAGTCACA 59.307 41.667 0.00 0.00 44.41 3.58
2382 3334 5.215239 GCTAATTGCTCTTTCTGAGTCAC 57.785 43.478 0.00 0.00 44.41 3.67
2396 3348 3.643792 TCCCTTCCTCTAGAGCTAATTGC 59.356 47.826 14.73 0.00 43.29 3.56
2397 3349 4.261825 CGTCCCTTCCTCTAGAGCTAATTG 60.262 50.000 14.73 0.00 0.00 2.32
2398 3350 3.892588 CGTCCCTTCCTCTAGAGCTAATT 59.107 47.826 14.73 0.00 0.00 1.40
2399 3351 3.492337 CGTCCCTTCCTCTAGAGCTAAT 58.508 50.000 14.73 0.00 0.00 1.73
2400 3352 2.423088 CCGTCCCTTCCTCTAGAGCTAA 60.423 54.545 14.73 9.53 0.00 3.09
2401 3353 1.143277 CCGTCCCTTCCTCTAGAGCTA 59.857 57.143 14.73 1.47 0.00 3.32
2402 3354 0.106419 CCGTCCCTTCCTCTAGAGCT 60.106 60.000 14.73 0.00 0.00 4.09
2403 3355 1.740332 GCCGTCCCTTCCTCTAGAGC 61.740 65.000 14.73 0.00 0.00 4.09
2404 3356 0.106419 AGCCGTCCCTTCCTCTAGAG 60.106 60.000 13.18 13.18 0.00 2.43
2405 3357 1.133853 GTAGCCGTCCCTTCCTCTAGA 60.134 57.143 0.00 0.00 0.00 2.43
2406 3358 1.320507 GTAGCCGTCCCTTCCTCTAG 58.679 60.000 0.00 0.00 0.00 2.43
2407 3359 0.106318 GGTAGCCGTCCCTTCCTCTA 60.106 60.000 0.00 0.00 0.00 2.43
2408 3360 1.381463 GGTAGCCGTCCCTTCCTCT 60.381 63.158 0.00 0.00 0.00 3.69
2409 3361 2.783288 CGGTAGCCGTCCCTTCCTC 61.783 68.421 0.00 0.00 42.73 3.71
2410 3362 2.758737 CGGTAGCCGTCCCTTCCT 60.759 66.667 0.00 0.00 42.73 3.36
2411 3363 3.846430 CCGGTAGCCGTCCCTTCC 61.846 72.222 6.82 0.00 46.80 3.46
2412 3364 3.846430 CCCGGTAGCCGTCCCTTC 61.846 72.222 0.00 0.00 46.80 3.46
2413 3365 4.387343 TCCCGGTAGCCGTCCCTT 62.387 66.667 0.00 0.00 46.80 3.95
2417 3369 3.525545 GAGGTCCCGGTAGCCGTC 61.526 72.222 0.00 0.00 46.80 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.