Multiple sequence alignment - TraesCS4B01G104700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G104700 chr4B 100.000 4255 0 0 1 4255 112034738 112038992 0.000000e+00 7858.0
1 TraesCS4B01G104700 chr4B 95.690 116 3 2 2181 2294 25925565 25925450 7.270000e-43 185.0
2 TraesCS4B01G104700 chr1D 93.215 2034 78 21 201 2189 465127798 465129816 0.000000e+00 2937.0
3 TraesCS4B01G104700 chr1D 93.890 1293 62 5 2293 3582 465129815 465131093 0.000000e+00 1934.0
4 TraesCS4B01G104700 chr1D 89.744 195 16 4 3983 4175 465131080 465131272 3.290000e-61 246.0
5 TraesCS4B01G104700 chr1D 90.196 153 12 2 1 150 465127639 465127791 3.360000e-46 196.0
6 TraesCS4B01G104700 chr1A 95.190 1767 57 16 445 2189 557488416 557490176 0.000000e+00 2767.0
7 TraesCS4B01G104700 chr1A 96.044 1087 37 3 2293 3376 557490175 557491258 0.000000e+00 1764.0
8 TraesCS4B01G104700 chr1A 91.667 480 31 5 6 480 557487912 557488387 0.000000e+00 656.0
9 TraesCS4B01G104700 chr1A 88.889 225 13 6 4035 4255 557491257 557491473 2.520000e-67 267.0
10 TraesCS4B01G104700 chr1A 96.330 109 4 0 2187 2295 531867100 531866992 3.380000e-41 180.0
11 TraesCS4B01G104700 chr7B 88.322 2235 169 42 1 2189 504187681 504189869 0.000000e+00 2597.0
12 TraesCS4B01G104700 chr7B 92.218 1285 86 6 2293 3567 504189868 504191148 0.000000e+00 1807.0
13 TraesCS4B01G104700 chr7B 93.264 193 13 0 3375 3567 322488711 322488519 6.960000e-73 285.0
14 TraesCS4B01G104700 chr2B 93.096 1376 84 6 822 2189 87924389 87923017 0.000000e+00 2004.0
15 TraesCS4B01G104700 chr2B 92.512 1282 87 5 2293 3570 87923018 87921742 0.000000e+00 1827.0
16 TraesCS4B01G104700 chr2B 89.320 206 15 3 3983 4182 87921733 87921529 7.060000e-63 252.0
17 TraesCS4B01G104700 chr3A 90.138 578 46 8 3006 3581 22220085 22219517 0.000000e+00 741.0
18 TraesCS4B01G104700 chr3A 89.180 573 50 9 3012 3581 22222609 22222046 0.000000e+00 704.0
19 TraesCS4B01G104700 chr3A 89.494 514 37 11 3070 3581 22207079 22206581 6.000000e-178 634.0
20 TraesCS4B01G104700 chr3A 92.780 277 15 2 3983 4255 22206593 22206318 3.080000e-106 396.0
21 TraesCS4B01G104700 chr3A 92.419 277 16 2 3983 4255 22222058 22221783 1.430000e-104 390.0
22 TraesCS4B01G104700 chr3A 92.058 277 17 2 3983 4255 22219529 22219254 6.670000e-103 385.0
23 TraesCS4B01G104700 chr3A 97.273 110 3 0 2185 2294 405503775 405503666 2.020000e-43 187.0
24 TraesCS4B01G104700 chr6D 87.685 406 45 4 3576 3977 109269853 109270257 6.440000e-128 468.0
25 TraesCS4B01G104700 chr6D 93.717 191 12 0 3377 3567 348087602 348087792 1.940000e-73 287.0
26 TraesCS4B01G104700 chr6D 91.525 59 0 2 3983 4037 348087804 348087861 4.560000e-10 76.8
27 TraesCS4B01G104700 chr7A 87.198 414 47 4 3576 3985 545043661 545044072 2.320000e-127 466.0
28 TraesCS4B01G104700 chr7A 93.548 124 6 2 2188 2311 43831070 43831191 2.610000e-42 183.0
29 TraesCS4B01G104700 chr7A 92.742 124 7 2 2188 2311 43789305 43789426 1.220000e-40 178.0
30 TraesCS4B01G104700 chr7A 92.742 124 7 2 2188 2311 43798533 43798654 1.220000e-40 178.0
31 TraesCS4B01G104700 chr7A 84.314 102 15 1 2518 2619 183484084 183483984 9.740000e-17 99.0
32 TraesCS4B01G104700 chr7A 90.476 63 0 3 3983 4040 690071217 690071278 1.270000e-10 78.7
33 TraesCS4B01G104700 chr2A 87.136 412 47 4 3576 3983 678138839 678139248 3.000000e-126 462.0
34 TraesCS4B01G104700 chr2A 87.255 408 45 5 3579 3982 207336368 207335964 3.880000e-125 459.0
35 TraesCS4B01G104700 chr6B 86.988 415 46 6 3574 3984 663236919 663237329 1.080000e-125 460.0
36 TraesCS4B01G104700 chr6A 87.531 401 44 4 3576 3972 111563195 111563593 3.880000e-125 459.0
37 TraesCS4B01G104700 chr6A 91.045 134 9 2 2185 2315 158087914 158088047 1.220000e-40 178.0
38 TraesCS4B01G104700 chr6A 91.667 60 0 2 3983 4038 83062823 83062881 1.270000e-10 78.7
39 TraesCS4B01G104700 chr6A 90.476 63 1 2 3983 4041 117713867 117713928 1.270000e-10 78.7
40 TraesCS4B01G104700 chr3D 87.010 408 50 2 3579 3984 511457721 511457315 1.390000e-124 457.0
41 TraesCS4B01G104700 chr1B 87.073 410 46 5 3579 3983 161398398 161397991 1.390000e-124 457.0
42 TraesCS4B01G104700 chr3B 86.538 416 50 4 3579 3990 620821465 620821052 1.800000e-123 453.0
43 TraesCS4B01G104700 chr5A 92.784 194 14 0 3374 3567 559822688 559822495 9.010000e-72 281.0
44 TraesCS4B01G104700 chr7D 95.763 118 4 1 2179 2295 522160179 522160296 5.620000e-44 189.0
45 TraesCS4B01G104700 chr7D 85.294 102 13 1 2518 2619 178941502 178941403 2.090000e-18 104.0
46 TraesCS4B01G104700 chrUn 92.742 124 7 2 2188 2311 375561701 375561822 1.220000e-40 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G104700 chr4B 112034738 112038992 4254 False 7858.00 7858 100.000000 1 4255 1 chr4B.!!$F1 4254
1 TraesCS4B01G104700 chr1D 465127639 465131272 3633 False 1328.25 2937 91.761250 1 4175 4 chr1D.!!$F1 4174
2 TraesCS4B01G104700 chr1A 557487912 557491473 3561 False 1363.50 2767 92.947500 6 4255 4 chr1A.!!$F1 4249
3 TraesCS4B01G104700 chr7B 504187681 504191148 3467 False 2202.00 2597 90.270000 1 3567 2 chr7B.!!$F1 3566
4 TraesCS4B01G104700 chr2B 87921529 87924389 2860 True 1361.00 2004 91.642667 822 4182 3 chr2B.!!$R1 3360
5 TraesCS4B01G104700 chr3A 22219254 22222609 3355 True 555.00 741 90.948750 3006 4255 4 chr3A.!!$R3 1249
6 TraesCS4B01G104700 chr3A 22206318 22207079 761 True 515.00 634 91.137000 3070 4255 2 chr3A.!!$R2 1185

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
682 764 0.894141 GCAAGTGAGAGAGAGCTGGA 59.106 55.0 0.0 0.0 0.0 3.86 F
1191 1296 1.122019 AAGGTGTCTCGCAACCTCCT 61.122 55.0 0.0 0.0 34.7 3.69 F
2930 3068 0.753262 AATTCGGAGGGTCTGGATCG 59.247 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2279 2399 0.029035 CGACATACTCCCTCCGTTCG 59.971 60.0 0.00 0.0 0.00 3.95 R
2957 3095 0.035458 CACTTGGTCCAGTCCCAGTC 59.965 60.0 0.00 0.0 32.23 3.51 R
3818 6502 0.030101 TTCAAAAGTTTGCCTCGCGG 59.970 50.0 6.13 0.0 38.05 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 1.277842 TCGAGCAGCCCAAAATAGTCA 59.722 47.619 0.00 0.00 0.00 3.41
90 94 3.026694 GCAGCCCAAAATAGTCAGGAAT 58.973 45.455 0.00 0.00 0.00 3.01
171 175 4.773323 AGCAATTTCTAGAAACAGCCAC 57.227 40.909 27.26 13.70 35.38 5.01
173 177 4.022849 AGCAATTTCTAGAAACAGCCACAC 60.023 41.667 27.26 11.77 35.38 3.82
174 178 4.261572 GCAATTTCTAGAAACAGCCACACA 60.262 41.667 19.94 0.00 32.51 3.72
183 187 1.446099 CAGCCACACAGCGATACGT 60.446 57.895 0.00 0.00 38.01 3.57
273 277 4.533919 TCAAAATACTGCCCCATTTGTG 57.466 40.909 0.00 0.00 33.76 3.33
330 337 7.501559 ACTGAATGATCATCGATTTCCTCAATT 59.498 33.333 9.06 0.00 34.37 2.32
441 451 7.038587 ACTGATACTGTTGTTTATACTCCCACA 60.039 37.037 0.00 0.00 0.00 4.17
449 459 6.870971 TGTTTATACTCCCACAAACTGAAC 57.129 37.500 0.00 0.00 33.16 3.18
492 564 4.574271 TGCAGCACCAGCACAGCT 62.574 61.111 0.00 0.00 45.49 4.24
545 617 4.277672 AGGAGCATTATACAGCAAAGCATG 59.722 41.667 0.00 0.00 0.00 4.06
682 764 0.894141 GCAAGTGAGAGAGAGCTGGA 59.106 55.000 0.00 0.00 0.00 3.86
684 766 2.692557 GCAAGTGAGAGAGAGCTGGATA 59.307 50.000 0.00 0.00 0.00 2.59
719 801 1.132500 GGCATCTACTGGGCTTACCT 58.868 55.000 0.00 0.00 41.11 3.08
735 817 2.571216 CCTTGTCCCCGACGTGTCT 61.571 63.158 0.00 0.00 34.95 3.41
736 818 1.246056 CCTTGTCCCCGACGTGTCTA 61.246 60.000 0.00 0.00 34.95 2.59
774 870 1.139058 GTCACTCTGGGGATATGCGTT 59.861 52.381 0.00 0.00 0.00 4.84
928 1030 4.406648 TGGACAGACATGATGACATACC 57.593 45.455 0.00 0.00 35.09 2.73
929 1031 3.134623 TGGACAGACATGATGACATACCC 59.865 47.826 0.00 0.00 35.09 3.69
933 1035 6.408092 GGACAGACATGATGACATACCCTTAA 60.408 42.308 0.00 0.00 35.09 1.85
1191 1296 1.122019 AAGGTGTCTCGCAACCTCCT 61.122 55.000 0.00 0.00 34.70 3.69
1206 1311 1.615116 CCTCCTGATGCTCCTTTTGCA 60.615 52.381 0.00 0.00 44.95 4.08
1524 1629 5.731599 CTGATGCATTCAGTAAGAACTCC 57.268 43.478 0.00 0.00 45.79 3.85
2050 2156 3.379688 GCCTCAGGCTATTTCTTCCTTTG 59.620 47.826 9.09 0.00 46.69 2.77
2051 2157 3.379688 CCTCAGGCTATTTCTTCCTTTGC 59.620 47.826 0.00 0.00 0.00 3.68
2052 2158 4.268359 CTCAGGCTATTTCTTCCTTTGCT 58.732 43.478 0.00 0.00 0.00 3.91
2053 2159 4.012374 TCAGGCTATTTCTTCCTTTGCTG 58.988 43.478 0.00 0.00 0.00 4.41
2054 2160 2.757314 AGGCTATTTCTTCCTTTGCTGC 59.243 45.455 0.00 0.00 0.00 5.25
2055 2161 2.493278 GGCTATTTCTTCCTTTGCTGCA 59.507 45.455 0.00 0.00 0.00 4.41
2056 2162 3.056607 GGCTATTTCTTCCTTTGCTGCAA 60.057 43.478 11.69 11.69 0.00 4.08
2057 2163 4.559153 GCTATTTCTTCCTTTGCTGCAAA 58.441 39.130 24.68 24.68 0.00 3.68
2059 2165 2.514205 TTCTTCCTTTGCTGCAAAGC 57.486 45.000 37.25 9.86 46.44 3.51
2060 2166 1.401761 TCTTCCTTTGCTGCAAAGCA 58.598 45.000 37.25 27.60 46.44 3.91
2177 2297 1.165270 AAAGGTCATGTTGCTACGGC 58.835 50.000 0.00 0.00 39.26 5.68
2190 2310 4.665833 TGCTACGGCACTCAAATATACT 57.334 40.909 0.00 0.00 44.28 2.12
2191 2311 4.617959 TGCTACGGCACTCAAATATACTC 58.382 43.478 0.00 0.00 44.28 2.59
2192 2312 3.988517 GCTACGGCACTCAAATATACTCC 59.011 47.826 0.00 0.00 38.54 3.85
2193 2313 3.470645 ACGGCACTCAAATATACTCCC 57.529 47.619 0.00 0.00 0.00 4.30
2194 2314 3.039011 ACGGCACTCAAATATACTCCCT 58.961 45.455 0.00 0.00 0.00 4.20
2195 2315 3.069729 ACGGCACTCAAATATACTCCCTC 59.930 47.826 0.00 0.00 0.00 4.30
2196 2316 3.555168 CGGCACTCAAATATACTCCCTCC 60.555 52.174 0.00 0.00 0.00 4.30
2197 2317 3.555168 GGCACTCAAATATACTCCCTCCG 60.555 52.174 0.00 0.00 0.00 4.63
2198 2318 3.069729 GCACTCAAATATACTCCCTCCGT 59.930 47.826 0.00 0.00 0.00 4.69
2199 2319 4.443034 GCACTCAAATATACTCCCTCCGTT 60.443 45.833 0.00 0.00 0.00 4.44
2200 2320 5.290386 CACTCAAATATACTCCCTCCGTTC 58.710 45.833 0.00 0.00 0.00 3.95
2201 2321 4.037684 ACTCAAATATACTCCCTCCGTTCG 59.962 45.833 0.00 0.00 0.00 3.95
2202 2322 3.319972 TCAAATATACTCCCTCCGTTCGG 59.680 47.826 4.74 4.74 0.00 4.30
2203 2323 2.965671 ATATACTCCCTCCGTTCGGA 57.034 50.000 13.34 13.34 0.00 4.55
2204 2324 2.734755 TATACTCCCTCCGTTCGGAA 57.265 50.000 14.79 0.00 33.41 4.30
2205 2325 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
2206 2326 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
2207 2327 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2208 2328 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
2209 2329 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
2210 2330 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
2211 2331 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
2212 2332 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
2213 2333 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
2214 2334 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
2215 2335 4.243270 CTCCGTTCGGAATTACTTGTCTT 58.757 43.478 14.79 0.00 33.41 3.01
2216 2336 3.991773 TCCGTTCGGAATTACTTGTCTTG 59.008 43.478 11.66 0.00 0.00 3.02
2217 2337 3.991773 CCGTTCGGAATTACTTGTCTTGA 59.008 43.478 5.19 0.00 0.00 3.02
2218 2338 4.449743 CCGTTCGGAATTACTTGTCTTGAA 59.550 41.667 5.19 0.00 0.00 2.69
2219 2339 5.049954 CCGTTCGGAATTACTTGTCTTGAAA 60.050 40.000 5.19 0.00 0.00 2.69
2220 2340 6.423862 CGTTCGGAATTACTTGTCTTGAAAA 58.576 36.000 0.00 0.00 0.00 2.29
2221 2341 7.075741 CGTTCGGAATTACTTGTCTTGAAAAT 58.924 34.615 0.00 0.00 0.00 1.82
2222 2342 7.059488 CGTTCGGAATTACTTGTCTTGAAAATG 59.941 37.037 0.00 0.00 0.00 2.32
2223 2343 7.737972 TCGGAATTACTTGTCTTGAAAATGA 57.262 32.000 0.00 0.00 0.00 2.57
2224 2344 8.160521 TCGGAATTACTTGTCTTGAAAATGAA 57.839 30.769 0.00 0.00 0.00 2.57
2225 2345 8.792633 TCGGAATTACTTGTCTTGAAAATGAAT 58.207 29.630 0.00 0.00 0.00 2.57
2226 2346 8.853345 CGGAATTACTTGTCTTGAAAATGAATG 58.147 33.333 0.00 0.00 0.00 2.67
2227 2347 9.696917 GGAATTACTTGTCTTGAAAATGAATGT 57.303 29.630 0.00 0.00 0.00 2.71
2267 2387 7.664082 AAATCTAGATACATCCATTTCTGCG 57.336 36.000 5.46 0.00 0.00 5.18
2268 2388 6.596309 ATCTAGATACATCCATTTCTGCGA 57.404 37.500 2.53 0.00 0.00 5.10
2269 2389 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2270 2390 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
2271 2391 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
2272 2392 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
2273 2393 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
2274 2394 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
2275 2395 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
2276 2396 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
2277 2397 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
2278 2398 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
2279 2399 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
2280 2400 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
2281 2401 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
2282 2402 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
2283 2403 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
2284 2404 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
2285 2405 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
2286 2406 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
2287 2407 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
2288 2408 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
2289 2409 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
2290 2410 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
2291 2411 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
2543 2663 2.108970 ACTACTCCCTCCGATCCAAAC 58.891 52.381 0.00 0.00 0.00 2.93
2599 2731 1.144969 CCTTAGTTCAACGCTGCGAA 58.855 50.000 30.47 10.02 0.00 4.70
2870 3008 1.898863 AGGTATTGCCTCTCATGGGT 58.101 50.000 0.00 0.00 46.96 4.51
2924 3062 0.974383 ACGTCAAATTCGGAGGGTCT 59.026 50.000 0.00 0.00 0.00 3.85
2930 3068 0.753262 AATTCGGAGGGTCTGGATCG 59.247 55.000 0.00 0.00 0.00 3.69
2957 3095 1.344763 GATCTTCCCTGGGTATCCACG 59.655 57.143 13.56 0.00 38.32 4.94
2960 3098 0.042131 TTCCCTGGGTATCCACGACT 59.958 55.000 13.56 0.00 38.32 4.18
3014 3152 2.347452 CGTAACATACAACTTCGGCAGG 59.653 50.000 0.00 0.00 0.00 4.85
3177 3316 0.179148 CCAAAACTAATTCGGCGGCC 60.179 55.000 9.54 9.54 0.00 6.13
3180 3319 0.035820 AAACTAATTCGGCGGCCTGA 60.036 50.000 18.34 13.13 0.00 3.86
3208 3347 3.365364 GGTTTCATAGTGTGCTTGCTGTC 60.365 47.826 0.00 0.00 0.00 3.51
3311 5981 4.275936 GTGTCATGTTGTAACTTTGGCTCT 59.724 41.667 0.00 0.00 0.00 4.09
3382 6052 5.975988 TCAAGGCAGAATAATACTCCCTT 57.024 39.130 0.00 0.00 0.00 3.95
3383 6053 5.930135 TCAAGGCAGAATAATACTCCCTTC 58.070 41.667 0.00 0.00 0.00 3.46
3398 6068 6.716898 ACTCCCTTCGTTTTTATTTACTCG 57.283 37.500 0.00 0.00 0.00 4.18
3522 6192 9.902196 TCATCATTGCATATATTTTCACATCAC 57.098 29.630 0.00 0.00 0.00 3.06
3539 6213 9.676195 TTCACATCACATAAATTTGTTACTGTG 57.324 29.630 0.00 7.85 34.82 3.66
3595 6279 8.507524 AAAGTTTGACTATTAGGCTATGGAAC 57.492 34.615 0.00 0.00 0.00 3.62
3596 6280 7.439108 AGTTTGACTATTAGGCTATGGAACT 57.561 36.000 0.00 0.00 0.00 3.01
3597 6281 7.862675 AGTTTGACTATTAGGCTATGGAACTT 58.137 34.615 0.00 0.00 0.00 2.66
3598 6282 7.770897 AGTTTGACTATTAGGCTATGGAACTTG 59.229 37.037 0.00 0.00 0.00 3.16
3599 6283 7.432148 TTGACTATTAGGCTATGGAACTTGA 57.568 36.000 0.00 0.00 0.00 3.02
3600 6284 7.618019 TGACTATTAGGCTATGGAACTTGAT 57.382 36.000 0.00 0.00 0.00 2.57
3601 6285 7.671302 TGACTATTAGGCTATGGAACTTGATC 58.329 38.462 0.00 0.00 0.00 2.92
3602 6286 7.290014 TGACTATTAGGCTATGGAACTTGATCA 59.710 37.037 0.00 0.00 0.00 2.92
3603 6287 8.212259 ACTATTAGGCTATGGAACTTGATCAT 57.788 34.615 0.00 0.00 0.00 2.45
3604 6288 8.664079 ACTATTAGGCTATGGAACTTGATCATT 58.336 33.333 0.00 0.00 0.00 2.57
3605 6289 7.756395 ATTAGGCTATGGAACTTGATCATTG 57.244 36.000 0.00 0.00 0.00 2.82
3606 6290 3.887716 AGGCTATGGAACTTGATCATTGC 59.112 43.478 0.00 0.00 38.33 3.56
3607 6291 3.633525 GGCTATGGAACTTGATCATTGCA 59.366 43.478 5.82 5.82 39.88 4.08
3608 6292 4.098349 GGCTATGGAACTTGATCATTGCAA 59.902 41.667 0.00 0.00 39.88 4.08
3609 6293 5.394443 GGCTATGGAACTTGATCATTGCAAA 60.394 40.000 1.71 0.00 39.88 3.68
3610 6294 6.101332 GCTATGGAACTTGATCATTGCAAAA 58.899 36.000 1.71 0.00 38.69 2.44
3611 6295 6.759827 GCTATGGAACTTGATCATTGCAAAAT 59.240 34.615 1.71 0.00 38.69 1.82
3612 6296 7.279313 GCTATGGAACTTGATCATTGCAAAATT 59.721 33.333 1.71 0.00 38.69 1.82
3613 6297 7.605410 ATGGAACTTGATCATTGCAAAATTC 57.395 32.000 1.71 0.86 29.46 2.17
3614 6298 6.522946 TGGAACTTGATCATTGCAAAATTCA 58.477 32.000 1.71 3.77 0.00 2.57
3615 6299 6.647481 TGGAACTTGATCATTGCAAAATTCAG 59.353 34.615 1.71 3.57 0.00 3.02
3616 6300 6.091713 GGAACTTGATCATTGCAAAATTCAGG 59.908 38.462 1.71 9.52 0.00 3.86
3617 6301 4.933400 ACTTGATCATTGCAAAATTCAGGC 59.067 37.500 1.71 0.00 0.00 4.85
3618 6302 4.811969 TGATCATTGCAAAATTCAGGCT 57.188 36.364 1.71 0.00 0.00 4.58
3619 6303 5.155278 TGATCATTGCAAAATTCAGGCTT 57.845 34.783 1.71 0.00 0.00 4.35
3620 6304 5.172934 TGATCATTGCAAAATTCAGGCTTC 58.827 37.500 1.71 0.00 0.00 3.86
3621 6305 4.603989 TCATTGCAAAATTCAGGCTTCA 57.396 36.364 1.71 0.00 0.00 3.02
3622 6306 5.155278 TCATTGCAAAATTCAGGCTTCAT 57.845 34.783 1.71 0.00 0.00 2.57
3623 6307 6.283544 TCATTGCAAAATTCAGGCTTCATA 57.716 33.333 1.71 0.00 0.00 2.15
3624 6308 6.699366 TCATTGCAAAATTCAGGCTTCATAA 58.301 32.000 1.71 0.00 0.00 1.90
3625 6309 7.332557 TCATTGCAAAATTCAGGCTTCATAAT 58.667 30.769 1.71 0.00 0.00 1.28
3626 6310 8.476447 TCATTGCAAAATTCAGGCTTCATAATA 58.524 29.630 1.71 0.00 0.00 0.98
3627 6311 9.268268 CATTGCAAAATTCAGGCTTCATAATAT 57.732 29.630 1.71 0.00 0.00 1.28
3628 6312 8.651391 TTGCAAAATTCAGGCTTCATAATATG 57.349 30.769 0.00 0.00 0.00 1.78
3629 6313 6.702723 TGCAAAATTCAGGCTTCATAATATGC 59.297 34.615 0.00 0.00 0.00 3.14
3630 6314 6.702723 GCAAAATTCAGGCTTCATAATATGCA 59.297 34.615 0.00 0.00 30.63 3.96
3631 6315 7.306983 GCAAAATTCAGGCTTCATAATATGCAC 60.307 37.037 0.00 0.00 30.63 4.57
3632 6316 5.972107 ATTCAGGCTTCATAATATGCACC 57.028 39.130 0.00 0.00 0.00 5.01
3633 6317 4.712051 TCAGGCTTCATAATATGCACCT 57.288 40.909 0.00 0.00 0.00 4.00
3634 6318 4.645535 TCAGGCTTCATAATATGCACCTC 58.354 43.478 0.00 0.00 0.00 3.85
3635 6319 4.349048 TCAGGCTTCATAATATGCACCTCT 59.651 41.667 0.00 0.00 0.00 3.69
3636 6320 5.543790 TCAGGCTTCATAATATGCACCTCTA 59.456 40.000 0.00 0.00 0.00 2.43
3637 6321 6.214208 TCAGGCTTCATAATATGCACCTCTAT 59.786 38.462 0.00 0.00 0.00 1.98
3638 6322 6.315642 CAGGCTTCATAATATGCACCTCTATG 59.684 42.308 0.00 0.00 0.00 2.23
3639 6323 6.013032 AGGCTTCATAATATGCACCTCTATGT 60.013 38.462 0.00 0.00 0.00 2.29
3640 6324 7.180946 AGGCTTCATAATATGCACCTCTATGTA 59.819 37.037 0.00 0.00 0.00 2.29
3641 6325 7.493971 GGCTTCATAATATGCACCTCTATGTAG 59.506 40.741 0.00 0.00 0.00 2.74
3642 6326 7.010923 GCTTCATAATATGCACCTCTATGTAGC 59.989 40.741 15.93 15.93 36.72 3.58
3643 6327 7.480760 TCATAATATGCACCTCTATGTAGCA 57.519 36.000 0.00 0.00 39.79 3.49
3644 6328 8.082672 TCATAATATGCACCTCTATGTAGCAT 57.917 34.615 0.00 0.00 46.53 3.79
3645 6329 8.200120 TCATAATATGCACCTCTATGTAGCATC 58.800 37.037 0.00 0.00 44.07 3.91
3646 6330 6.617782 AATATGCACCTCTATGTAGCATCT 57.382 37.500 0.00 0.00 44.07 2.90
3647 6331 4.970860 ATGCACCTCTATGTAGCATCTT 57.029 40.909 0.00 0.00 41.70 2.40
3648 6332 4.063998 TGCACCTCTATGTAGCATCTTG 57.936 45.455 0.00 0.00 0.00 3.02
3649 6333 3.706086 TGCACCTCTATGTAGCATCTTGA 59.294 43.478 0.00 0.00 0.00 3.02
3650 6334 4.202192 TGCACCTCTATGTAGCATCTTGAG 60.202 45.833 0.00 0.00 0.00 3.02
3651 6335 4.798924 GCACCTCTATGTAGCATCTTGAGG 60.799 50.000 16.56 16.56 43.56 3.86
3652 6336 3.900601 ACCTCTATGTAGCATCTTGAGGG 59.099 47.826 19.55 0.00 42.60 4.30
3653 6337 3.900601 CCTCTATGTAGCATCTTGAGGGT 59.099 47.826 13.15 0.00 36.79 4.34
3654 6338 4.346418 CCTCTATGTAGCATCTTGAGGGTT 59.654 45.833 13.15 0.00 36.79 4.11
3655 6339 5.163258 CCTCTATGTAGCATCTTGAGGGTTT 60.163 44.000 13.15 0.00 36.79 3.27
3656 6340 5.674525 TCTATGTAGCATCTTGAGGGTTTG 58.325 41.667 0.00 0.00 0.00 2.93
3657 6341 3.071874 TGTAGCATCTTGAGGGTTTGG 57.928 47.619 0.00 0.00 0.00 3.28
3658 6342 2.375174 TGTAGCATCTTGAGGGTTTGGT 59.625 45.455 0.00 0.00 0.00 3.67
3659 6343 2.206576 AGCATCTTGAGGGTTTGGTC 57.793 50.000 0.00 0.00 0.00 4.02
3660 6344 1.425066 AGCATCTTGAGGGTTTGGTCA 59.575 47.619 0.00 0.00 0.00 4.02
3661 6345 2.158475 AGCATCTTGAGGGTTTGGTCAA 60.158 45.455 0.00 0.00 0.00 3.18
3663 6347 2.656947 TCTTGAGGGTTTGGTCAAGG 57.343 50.000 11.18 0.00 46.53 3.61
3664 6348 2.131854 TCTTGAGGGTTTGGTCAAGGA 58.868 47.619 11.18 0.00 46.53 3.36
3665 6349 2.158667 TCTTGAGGGTTTGGTCAAGGAC 60.159 50.000 11.18 0.00 46.53 3.85
3666 6350 1.518367 TGAGGGTTTGGTCAAGGACT 58.482 50.000 0.00 0.00 32.47 3.85
3667 6351 1.142870 TGAGGGTTTGGTCAAGGACTG 59.857 52.381 0.00 0.00 32.47 3.51
3668 6352 0.478507 AGGGTTTGGTCAAGGACTGG 59.521 55.000 0.00 0.00 32.47 4.00
3669 6353 0.185175 GGGTTTGGTCAAGGACTGGT 59.815 55.000 0.00 0.00 32.47 4.00
3670 6354 1.318576 GGTTTGGTCAAGGACTGGTG 58.681 55.000 0.00 0.00 32.47 4.17
3671 6355 1.318576 GTTTGGTCAAGGACTGGTGG 58.681 55.000 0.00 0.00 32.47 4.61
3672 6356 1.133915 GTTTGGTCAAGGACTGGTGGA 60.134 52.381 0.00 0.00 32.47 4.02
3673 6357 0.472471 TTGGTCAAGGACTGGTGGAC 59.528 55.000 0.00 0.00 32.47 4.02
3674 6358 0.692756 TGGTCAAGGACTGGTGGACA 60.693 55.000 0.00 0.00 32.47 4.02
3675 6359 0.472471 GGTCAAGGACTGGTGGACAA 59.528 55.000 0.00 0.00 32.47 3.18
3676 6360 1.133915 GGTCAAGGACTGGTGGACAAA 60.134 52.381 0.00 0.00 32.47 2.83
3677 6361 2.489073 GGTCAAGGACTGGTGGACAAAT 60.489 50.000 0.00 0.00 32.47 2.32
3678 6362 3.244770 GGTCAAGGACTGGTGGACAAATA 60.245 47.826 0.00 0.00 32.47 1.40
3679 6363 4.003648 GTCAAGGACTGGTGGACAAATAG 58.996 47.826 0.00 0.00 0.00 1.73
3680 6364 3.009033 TCAAGGACTGGTGGACAAATAGG 59.991 47.826 0.00 0.00 0.00 2.57
3681 6365 2.915869 AGGACTGGTGGACAAATAGGA 58.084 47.619 0.00 0.00 0.00 2.94
3682 6366 2.572104 AGGACTGGTGGACAAATAGGAC 59.428 50.000 0.00 0.00 0.00 3.85
3683 6367 2.355818 GGACTGGTGGACAAATAGGACC 60.356 54.545 0.00 0.00 0.00 4.46
3684 6368 1.278127 ACTGGTGGACAAATAGGACCG 59.722 52.381 0.00 0.00 0.00 4.79
3685 6369 0.616371 TGGTGGACAAATAGGACCGG 59.384 55.000 0.00 0.00 0.00 5.28
3686 6370 0.746923 GGTGGACAAATAGGACCGGC 60.747 60.000 0.00 0.00 0.00 6.13
3687 6371 1.087771 GTGGACAAATAGGACCGGCG 61.088 60.000 0.00 0.00 0.00 6.46
3688 6372 2.178235 GGACAAATAGGACCGGCGC 61.178 63.158 0.00 0.00 0.00 6.53
3689 6373 1.448893 GACAAATAGGACCGGCGCA 60.449 57.895 10.83 0.00 0.00 6.09
3690 6374 1.429148 GACAAATAGGACCGGCGCAG 61.429 60.000 10.83 4.65 0.00 5.18
3691 6375 2.180204 CAAATAGGACCGGCGCAGG 61.180 63.158 25.72 25.72 37.30 4.85
3692 6376 2.363975 AAATAGGACCGGCGCAGGA 61.364 57.895 33.66 11.20 34.73 3.86
3693 6377 2.311688 AAATAGGACCGGCGCAGGAG 62.312 60.000 33.66 8.01 34.73 3.69
3694 6378 4.753662 TAGGACCGGCGCAGGAGT 62.754 66.667 33.66 17.98 34.73 3.85
3703 6387 4.760047 CGCAGGAGTCCCCAACGG 62.760 72.222 5.25 0.00 37.41 4.44
3714 6398 2.755469 CCAACGGGAAGGCCATGG 60.755 66.667 7.63 7.63 35.59 3.66
3715 6399 3.451894 CAACGGGAAGGCCATGGC 61.452 66.667 29.47 29.47 41.06 4.40
3725 6409 4.887615 GCCATGGCCTCTCTAACC 57.112 61.111 27.24 0.00 34.56 2.85
3726 6410 1.915228 GCCATGGCCTCTCTAACCA 59.085 57.895 27.24 0.00 37.99 3.67
3727 6411 0.475906 GCCATGGCCTCTCTAACCAT 59.524 55.000 27.24 0.00 45.08 3.55
3730 6414 1.516110 ATGGCCTCTCTAACCATGCT 58.484 50.000 3.32 0.00 42.59 3.79
3731 6415 0.833287 TGGCCTCTCTAACCATGCTC 59.167 55.000 3.32 0.00 0.00 4.26
3732 6416 0.249657 GGCCTCTCTAACCATGCTCG 60.250 60.000 0.00 0.00 0.00 5.03
3733 6417 0.461961 GCCTCTCTAACCATGCTCGT 59.538 55.000 0.00 0.00 0.00 4.18
3734 6418 1.537135 GCCTCTCTAACCATGCTCGTC 60.537 57.143 0.00 0.00 0.00 4.20
3735 6419 2.028130 CCTCTCTAACCATGCTCGTCT 58.972 52.381 0.00 0.00 0.00 4.18
3736 6420 2.034053 CCTCTCTAACCATGCTCGTCTC 59.966 54.545 0.00 0.00 0.00 3.36
3737 6421 2.685388 CTCTCTAACCATGCTCGTCTCA 59.315 50.000 0.00 0.00 0.00 3.27
3738 6422 3.291584 TCTCTAACCATGCTCGTCTCAT 58.708 45.455 0.00 0.00 0.00 2.90
3739 6423 3.067320 TCTCTAACCATGCTCGTCTCATG 59.933 47.826 7.12 7.12 40.60 3.07
3743 6427 2.983433 CATGCTCGTCTCATGGACC 58.017 57.895 8.25 0.00 41.64 4.46
3744 6428 0.463204 CATGCTCGTCTCATGGACCT 59.537 55.000 8.25 0.00 41.64 3.85
3745 6429 1.134580 CATGCTCGTCTCATGGACCTT 60.135 52.381 8.25 0.00 41.64 3.50
3746 6430 0.976641 TGCTCGTCTCATGGACCTTT 59.023 50.000 8.25 0.00 41.64 3.11
3747 6431 1.347707 TGCTCGTCTCATGGACCTTTT 59.652 47.619 8.25 0.00 41.64 2.27
3748 6432 1.734465 GCTCGTCTCATGGACCTTTTG 59.266 52.381 8.25 0.00 41.64 2.44
3750 6434 1.974957 TCGTCTCATGGACCTTTTGGA 59.025 47.619 8.25 0.00 44.07 3.53
3751 6435 2.370519 TCGTCTCATGGACCTTTTGGAA 59.629 45.455 8.25 0.00 44.07 3.53
3752 6436 2.484264 CGTCTCATGGACCTTTTGGAAC 59.516 50.000 8.25 0.00 44.07 3.62
3753 6437 2.484264 GTCTCATGGACCTTTTGGAACG 59.516 50.000 0.00 0.00 44.07 3.95
3754 6438 2.370519 TCTCATGGACCTTTTGGAACGA 59.629 45.455 0.00 0.00 44.07 3.85
3755 6439 2.744202 CTCATGGACCTTTTGGAACGAG 59.256 50.000 0.00 0.00 44.07 4.18
3756 6440 2.105821 TCATGGACCTTTTGGAACGAGT 59.894 45.455 0.00 0.00 44.07 4.18
3757 6441 1.961793 TGGACCTTTTGGAACGAGTG 58.038 50.000 0.00 0.00 44.07 3.51
3758 6442 1.235724 GGACCTTTTGGAACGAGTGG 58.764 55.000 0.00 0.00 44.07 4.00
3759 6443 1.202722 GGACCTTTTGGAACGAGTGGA 60.203 52.381 0.00 0.00 44.07 4.02
3760 6444 2.567985 GACCTTTTGGAACGAGTGGAA 58.432 47.619 0.00 0.00 44.07 3.53
3761 6445 2.289820 GACCTTTTGGAACGAGTGGAAC 59.710 50.000 0.00 0.00 44.07 3.62
3762 6446 1.263217 CCTTTTGGAACGAGTGGAACG 59.737 52.381 0.00 0.00 42.67 3.95
3763 6447 0.658897 TTTTGGAACGAGTGGAACGC 59.341 50.000 0.00 0.00 45.86 4.84
3764 6448 1.161563 TTTGGAACGAGTGGAACGCC 61.162 55.000 0.00 0.00 45.86 5.68
3765 6449 2.741211 GGAACGAGTGGAACGCCC 60.741 66.667 0.00 0.00 45.86 6.13
3766 6450 2.029964 GAACGAGTGGAACGCCCA 59.970 61.111 0.00 0.00 45.86 5.36
3773 6457 4.713946 TGGAACGCCCATGTCTTC 57.286 55.556 0.00 0.00 40.82 2.87
3774 6458 2.066340 TGGAACGCCCATGTCTTCT 58.934 52.632 0.00 0.00 40.82 2.85
3775 6459 0.321564 TGGAACGCCCATGTCTTCTG 60.322 55.000 0.00 0.00 40.82 3.02
3776 6460 0.036388 GGAACGCCCATGTCTTCTGA 60.036 55.000 0.00 0.00 34.14 3.27
3777 6461 1.079503 GAACGCCCATGTCTTCTGAC 58.920 55.000 0.00 0.00 43.20 3.51
3778 6462 0.670546 AACGCCCATGTCTTCTGACG 60.671 55.000 0.00 0.00 45.70 4.35
3779 6463 2.456119 CGCCCATGTCTTCTGACGC 61.456 63.158 0.00 0.00 45.70 5.19
3780 6464 1.375908 GCCCATGTCTTCTGACGCA 60.376 57.895 0.00 0.00 45.70 5.24
3781 6465 0.955428 GCCCATGTCTTCTGACGCAA 60.955 55.000 0.00 0.00 45.70 4.85
3782 6466 1.081892 CCCATGTCTTCTGACGCAAG 58.918 55.000 0.00 0.00 45.70 4.01
3783 6467 1.338105 CCCATGTCTTCTGACGCAAGA 60.338 52.381 0.00 0.00 45.70 3.02
3784 6468 1.998315 CCATGTCTTCTGACGCAAGAG 59.002 52.381 0.00 0.00 45.70 2.85
3785 6469 2.611473 CCATGTCTTCTGACGCAAGAGT 60.611 50.000 0.00 0.00 45.70 3.24
3786 6470 2.140065 TGTCTTCTGACGCAAGAGTG 57.860 50.000 0.00 0.00 45.70 3.51
3796 6480 4.386413 CAAGAGTGCTCCACCACC 57.614 61.111 0.00 0.00 36.38 4.61
3797 6481 1.451504 CAAGAGTGCTCCACCACCA 59.548 57.895 0.00 0.00 36.38 4.17
3798 6482 0.179020 CAAGAGTGCTCCACCACCAA 60.179 55.000 0.00 0.00 36.38 3.67
3799 6483 0.773644 AAGAGTGCTCCACCACCAAT 59.226 50.000 0.00 0.00 36.38 3.16
3800 6484 0.326264 AGAGTGCTCCACCACCAATC 59.674 55.000 0.00 0.00 36.38 2.67
3801 6485 0.326264 GAGTGCTCCACCACCAATCT 59.674 55.000 0.00 0.00 36.38 2.40
3802 6486 0.773644 AGTGCTCCACCACCAATCTT 59.226 50.000 0.00 0.00 36.38 2.40
3803 6487 0.883833 GTGCTCCACCACCAATCTTG 59.116 55.000 0.00 0.00 0.00 3.02
3804 6488 0.895100 TGCTCCACCACCAATCTTGC 60.895 55.000 0.00 0.00 0.00 4.01
3805 6489 0.610232 GCTCCACCACCAATCTTGCT 60.610 55.000 0.00 0.00 0.00 3.91
3806 6490 1.340017 GCTCCACCACCAATCTTGCTA 60.340 52.381 0.00 0.00 0.00 3.49
3807 6491 2.879756 GCTCCACCACCAATCTTGCTAA 60.880 50.000 0.00 0.00 0.00 3.09
3808 6492 3.420893 CTCCACCACCAATCTTGCTAAA 58.579 45.455 0.00 0.00 0.00 1.85
3809 6493 3.153919 TCCACCACCAATCTTGCTAAAC 58.846 45.455 0.00 0.00 0.00 2.01
3810 6494 2.231235 CCACCACCAATCTTGCTAAACC 59.769 50.000 0.00 0.00 0.00 3.27
3811 6495 2.890311 CACCACCAATCTTGCTAAACCA 59.110 45.455 0.00 0.00 0.00 3.67
3812 6496 2.890945 ACCACCAATCTTGCTAAACCAC 59.109 45.455 0.00 0.00 0.00 4.16
3813 6497 2.890311 CCACCAATCTTGCTAAACCACA 59.110 45.455 0.00 0.00 0.00 4.17
3814 6498 3.511146 CCACCAATCTTGCTAAACCACAT 59.489 43.478 0.00 0.00 0.00 3.21
3815 6499 4.380867 CCACCAATCTTGCTAAACCACATC 60.381 45.833 0.00 0.00 0.00 3.06
3816 6500 4.218200 CACCAATCTTGCTAAACCACATCA 59.782 41.667 0.00 0.00 0.00 3.07
3817 6501 4.218417 ACCAATCTTGCTAAACCACATCAC 59.782 41.667 0.00 0.00 0.00 3.06
3818 6502 4.380867 CCAATCTTGCTAAACCACATCACC 60.381 45.833 0.00 0.00 0.00 4.02
3819 6503 2.790433 TCTTGCTAAACCACATCACCC 58.210 47.619 0.00 0.00 0.00 4.61
3820 6504 1.468520 CTTGCTAAACCACATCACCCG 59.531 52.381 0.00 0.00 0.00 5.28
3821 6505 0.958382 TGCTAAACCACATCACCCGC 60.958 55.000 0.00 0.00 0.00 6.13
3822 6506 1.977594 GCTAAACCACATCACCCGCG 61.978 60.000 0.00 0.00 0.00 6.46
3823 6507 0.390603 CTAAACCACATCACCCGCGA 60.391 55.000 8.23 0.00 0.00 5.87
3824 6508 0.390603 TAAACCACATCACCCGCGAG 60.391 55.000 8.23 0.00 0.00 5.03
3837 6521 3.542825 CGCGAGGCAAACTTTTGAA 57.457 47.368 0.00 0.00 40.55 2.69
3838 6522 2.050477 CGCGAGGCAAACTTTTGAAT 57.950 45.000 0.00 0.00 40.55 2.57
3839 6523 1.978782 CGCGAGGCAAACTTTTGAATC 59.021 47.619 0.00 2.01 40.55 2.52
3840 6524 2.604373 CGCGAGGCAAACTTTTGAATCA 60.604 45.455 0.00 0.00 40.55 2.57
3841 6525 2.726241 GCGAGGCAAACTTTTGAATCAC 59.274 45.455 5.87 0.00 40.55 3.06
3842 6526 3.308530 CGAGGCAAACTTTTGAATCACC 58.691 45.455 5.87 0.00 40.55 4.02
3843 6527 3.308530 GAGGCAAACTTTTGAATCACCG 58.691 45.455 5.87 0.00 40.55 4.94
3844 6528 1.792367 GGCAAACTTTTGAATCACCGC 59.208 47.619 5.87 0.00 40.55 5.68
3845 6529 1.792367 GCAAACTTTTGAATCACCGCC 59.208 47.619 5.87 0.00 40.55 6.13
3846 6530 2.050691 CAAACTTTTGAATCACCGCCG 58.949 47.619 0.00 0.00 40.55 6.46
3847 6531 0.596082 AACTTTTGAATCACCGCCGG 59.404 50.000 0.00 0.00 0.00 6.13
3848 6532 0.250553 ACTTTTGAATCACCGCCGGA 60.251 50.000 11.71 0.00 0.00 5.14
3849 6533 0.447801 CTTTTGAATCACCGCCGGAG 59.552 55.000 11.71 0.41 0.00 4.63
3850 6534 0.250553 TTTTGAATCACCGCCGGAGT 60.251 50.000 11.71 0.00 0.00 3.85
3851 6535 0.250553 TTTGAATCACCGCCGGAGTT 60.251 50.000 11.71 0.35 0.00 3.01
3852 6536 0.609151 TTGAATCACCGCCGGAGTTA 59.391 50.000 11.71 0.00 0.00 2.24
3853 6537 0.609151 TGAATCACCGCCGGAGTTAA 59.391 50.000 11.71 0.00 0.00 2.01
3854 6538 1.287425 GAATCACCGCCGGAGTTAAG 58.713 55.000 11.71 0.00 0.00 1.85
3855 6539 0.899720 AATCACCGCCGGAGTTAAGA 59.100 50.000 11.71 0.00 0.00 2.10
3856 6540 0.899720 ATCACCGCCGGAGTTAAGAA 59.100 50.000 11.71 0.00 0.00 2.52
3857 6541 0.680618 TCACCGCCGGAGTTAAGAAA 59.319 50.000 11.71 0.00 0.00 2.52
3858 6542 1.276989 TCACCGCCGGAGTTAAGAAAT 59.723 47.619 11.71 0.00 0.00 2.17
3859 6543 2.081462 CACCGCCGGAGTTAAGAAATT 58.919 47.619 11.71 0.00 0.00 1.82
3860 6544 3.055963 TCACCGCCGGAGTTAAGAAATTA 60.056 43.478 11.71 0.00 0.00 1.40
3861 6545 3.308866 CACCGCCGGAGTTAAGAAATTAG 59.691 47.826 11.71 0.00 0.00 1.73
3862 6546 2.870411 CCGCCGGAGTTAAGAAATTAGG 59.130 50.000 5.05 0.00 0.00 2.69
3863 6547 3.431207 CCGCCGGAGTTAAGAAATTAGGA 60.431 47.826 5.05 0.00 0.00 2.94
3864 6548 4.186159 CGCCGGAGTTAAGAAATTAGGAA 58.814 43.478 5.05 0.00 0.00 3.36
3865 6549 4.632688 CGCCGGAGTTAAGAAATTAGGAAA 59.367 41.667 5.05 0.00 0.00 3.13
3866 6550 5.296035 CGCCGGAGTTAAGAAATTAGGAAAT 59.704 40.000 5.05 0.00 0.00 2.17
3867 6551 6.480981 CGCCGGAGTTAAGAAATTAGGAAATA 59.519 38.462 5.05 0.00 0.00 1.40
3868 6552 7.172703 CGCCGGAGTTAAGAAATTAGGAAATAT 59.827 37.037 5.05 0.00 0.00 1.28
3869 6553 8.847196 GCCGGAGTTAAGAAATTAGGAAATATT 58.153 33.333 5.05 0.00 0.00 1.28
3887 6571 9.899226 GGAAATATTATCTTGTGCAAGTAATCC 57.101 33.333 11.17 9.01 39.38 3.01
3891 6575 9.851686 ATATTATCTTGTGCAAGTAATCCTTCA 57.148 29.630 11.17 2.43 39.38 3.02
3892 6576 8.757982 ATTATCTTGTGCAAGTAATCCTTCAT 57.242 30.769 11.17 0.00 39.38 2.57
3893 6577 5.885230 TCTTGTGCAAGTAATCCTTCATG 57.115 39.130 11.17 0.00 39.38 3.07
3894 6578 4.156556 TCTTGTGCAAGTAATCCTTCATGC 59.843 41.667 11.17 0.00 39.38 4.06
3895 6579 2.754552 TGTGCAAGTAATCCTTCATGCC 59.245 45.455 0.00 0.00 0.00 4.40
3896 6580 2.016318 TGCAAGTAATCCTTCATGCCG 58.984 47.619 0.00 0.00 0.00 5.69
3897 6581 2.017049 GCAAGTAATCCTTCATGCCGT 58.983 47.619 0.00 0.00 0.00 5.68
3898 6582 2.223340 GCAAGTAATCCTTCATGCCGTG 60.223 50.000 0.00 0.00 0.00 4.94
3899 6583 3.009723 CAAGTAATCCTTCATGCCGTGT 58.990 45.455 0.00 0.00 0.00 4.49
3900 6584 4.188462 CAAGTAATCCTTCATGCCGTGTA 58.812 43.478 0.00 0.00 0.00 2.90
3901 6585 4.481368 AGTAATCCTTCATGCCGTGTAA 57.519 40.909 0.00 0.00 0.00 2.41
3902 6586 4.839121 AGTAATCCTTCATGCCGTGTAAA 58.161 39.130 0.00 0.00 0.00 2.01
3903 6587 5.250200 AGTAATCCTTCATGCCGTGTAAAA 58.750 37.500 0.00 0.00 0.00 1.52
3904 6588 4.701956 AATCCTTCATGCCGTGTAAAAG 57.298 40.909 0.00 0.00 0.00 2.27
3905 6589 3.134574 TCCTTCATGCCGTGTAAAAGT 57.865 42.857 0.00 0.00 0.00 2.66
3906 6590 2.811431 TCCTTCATGCCGTGTAAAAGTG 59.189 45.455 0.00 0.00 0.00 3.16
3907 6591 2.552315 CCTTCATGCCGTGTAAAAGTGT 59.448 45.455 0.00 0.00 0.00 3.55
3908 6592 3.554524 CTTCATGCCGTGTAAAAGTGTG 58.445 45.455 0.00 0.00 0.00 3.82
3909 6593 2.566913 TCATGCCGTGTAAAAGTGTGT 58.433 42.857 0.00 0.00 0.00 3.72
3910 6594 2.546368 TCATGCCGTGTAAAAGTGTGTC 59.454 45.455 0.00 0.00 0.00 3.67
3911 6595 1.301423 TGCCGTGTAAAAGTGTGTCC 58.699 50.000 0.00 0.00 0.00 4.02
3912 6596 1.134340 TGCCGTGTAAAAGTGTGTCCT 60.134 47.619 0.00 0.00 0.00 3.85
3913 6597 1.944709 GCCGTGTAAAAGTGTGTCCTT 59.055 47.619 0.00 0.00 0.00 3.36
3914 6598 2.286772 GCCGTGTAAAAGTGTGTCCTTG 60.287 50.000 0.00 0.00 0.00 3.61
3915 6599 2.940410 CCGTGTAAAAGTGTGTCCTTGT 59.060 45.455 0.00 0.00 0.00 3.16
3916 6600 4.121317 CCGTGTAAAAGTGTGTCCTTGTA 58.879 43.478 0.00 0.00 0.00 2.41
3917 6601 4.571580 CCGTGTAAAAGTGTGTCCTTGTAA 59.428 41.667 0.00 0.00 0.00 2.41
3918 6602 5.277154 CCGTGTAAAAGTGTGTCCTTGTAAG 60.277 44.000 0.00 0.00 0.00 2.34
3919 6603 5.521010 CGTGTAAAAGTGTGTCCTTGTAAGA 59.479 40.000 0.00 0.00 0.00 2.10
3920 6604 6.036300 CGTGTAAAAGTGTGTCCTTGTAAGAA 59.964 38.462 0.00 0.00 0.00 2.52
3921 6605 7.413219 CGTGTAAAAGTGTGTCCTTGTAAGAAA 60.413 37.037 0.00 0.00 0.00 2.52
3922 6606 7.695201 GTGTAAAAGTGTGTCCTTGTAAGAAAC 59.305 37.037 0.00 0.00 0.00 2.78
3923 6607 7.608761 TGTAAAAGTGTGTCCTTGTAAGAAACT 59.391 33.333 0.00 0.00 0.00 2.66
3924 6608 7.462571 AAAAGTGTGTCCTTGTAAGAAACTT 57.537 32.000 0.00 0.00 0.00 2.66
3925 6609 7.462571 AAAGTGTGTCCTTGTAAGAAACTTT 57.537 32.000 0.00 0.00 32.16 2.66
3926 6610 6.679327 AGTGTGTCCTTGTAAGAAACTTTC 57.321 37.500 0.00 0.00 0.00 2.62
3927 6611 6.415573 AGTGTGTCCTTGTAAGAAACTTTCT 58.584 36.000 0.00 0.00 43.15 2.52
3929 6613 7.065923 AGTGTGTCCTTGTAAGAAACTTTCTTC 59.934 37.037 18.18 11.54 46.62 2.87
3930 6614 7.065923 GTGTGTCCTTGTAAGAAACTTTCTTCT 59.934 37.037 18.18 1.11 46.62 2.85
3931 6615 7.610305 TGTGTCCTTGTAAGAAACTTTCTTCTT 59.390 33.333 18.18 5.97 46.62 2.52
3932 6616 7.910683 GTGTCCTTGTAAGAAACTTTCTTCTTG 59.089 37.037 18.18 8.88 46.62 3.02
3933 6617 7.067008 TGTCCTTGTAAGAAACTTTCTTCTTGG 59.933 37.037 18.18 15.45 46.62 3.61
3934 6618 6.039382 TCCTTGTAAGAAACTTTCTTCTTGGC 59.961 38.462 18.18 7.53 46.62 4.52
3935 6619 6.039829 CCTTGTAAGAAACTTTCTTCTTGGCT 59.960 38.462 18.18 0.00 46.62 4.75
3936 6620 7.404671 TTGTAAGAAACTTTCTTCTTGGCTT 57.595 32.000 18.18 0.00 46.62 4.35
3937 6621 8.514330 TTGTAAGAAACTTTCTTCTTGGCTTA 57.486 30.769 18.18 0.00 46.62 3.09
3938 6622 8.514330 TGTAAGAAACTTTCTTCTTGGCTTAA 57.486 30.769 18.18 0.00 46.62 1.85
3939 6623 9.131791 TGTAAGAAACTTTCTTCTTGGCTTAAT 57.868 29.630 18.18 0.00 46.62 1.40
3940 6624 9.967346 GTAAGAAACTTTCTTCTTGGCTTAATT 57.033 29.630 18.18 0.00 46.62 1.40
3951 6635 9.784531 TCTTCTTGGCTTAATTAATAGATGAGG 57.215 33.333 0.00 0.00 0.00 3.86
3952 6636 7.986085 TCTTGGCTTAATTAATAGATGAGGC 57.014 36.000 0.00 0.00 0.00 4.70
3953 6637 7.517320 TCTTGGCTTAATTAATAGATGAGGCA 58.483 34.615 0.00 0.99 36.59 4.75
3954 6638 7.998383 TCTTGGCTTAATTAATAGATGAGGCAA 59.002 33.333 15.25 15.25 43.09 4.52
3955 6639 8.532186 TTGGCTTAATTAATAGATGAGGCAAA 57.468 30.769 14.26 3.54 42.61 3.68
3956 6640 8.710749 TGGCTTAATTAATAGATGAGGCAAAT 57.289 30.769 0.00 0.00 35.65 2.32
3957 6641 8.796475 TGGCTTAATTAATAGATGAGGCAAATC 58.204 33.333 0.00 0.00 35.65 2.17
3958 6642 9.018582 GGCTTAATTAATAGATGAGGCAAATCT 57.981 33.333 0.00 7.08 38.03 2.40
3963 6647 9.538508 AATTAATAGATGAGGCAAATCTTTTGC 57.461 29.630 14.88 14.88 44.22 3.68
3972 6656 4.794248 GCAAATCTTTTGCCTTCGTTTT 57.206 36.364 12.74 0.00 39.38 2.43
3973 6657 5.898630 GCAAATCTTTTGCCTTCGTTTTA 57.101 34.783 12.74 0.00 39.38 1.52
3974 6658 6.280537 GCAAATCTTTTGCCTTCGTTTTAA 57.719 33.333 12.74 0.00 39.38 1.52
3975 6659 6.710611 GCAAATCTTTTGCCTTCGTTTTAAA 58.289 32.000 12.74 0.00 39.38 1.52
3976 6660 7.183433 GCAAATCTTTTGCCTTCGTTTTAAAA 58.817 30.769 12.74 0.00 39.38 1.52
3977 6661 7.855409 GCAAATCTTTTGCCTTCGTTTTAAAAT 59.145 29.630 12.74 0.00 39.38 1.82
4042 6728 3.345508 AAACGGAGGGAGTATTTGACC 57.654 47.619 0.00 0.00 0.00 4.02
4060 6746 0.393820 CCACAGCCAGCAAAATGGTT 59.606 50.000 0.00 0.00 42.75 3.67
4070 6756 1.950015 GCAAAATGGTTTGATGGGGCC 60.950 52.381 0.00 0.00 45.99 5.80
4110 6796 2.423446 TGCAGGCAGAATGATAGCAA 57.577 45.000 0.00 0.00 39.69 3.91
4205 6891 6.339730 AGAAATGCTTTCACAACATGTCAAA 58.660 32.000 0.00 0.00 42.10 2.69
4214 6900 1.613437 CAACATGTCAAACCTGGGGAC 59.387 52.381 0.00 3.59 0.00 4.46
4233 6921 1.479323 ACGTATGTACCATGCTCCGTT 59.521 47.619 0.00 0.00 0.00 4.44
4250 6940 7.079475 TGCTCCGTTTGCTATTTAAGTTAAAC 58.921 34.615 10.20 0.00 34.14 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.148891 GTTCTAATCGGTTGCACGAAAAG 58.851 43.478 3.35 4.78 46.92 2.27
48 49 3.681897 GCTCGAGGGCACATAAATCATAG 59.318 47.826 15.58 0.00 0.00 2.23
51 52 1.209261 TGCTCGAGGGCACATAAATCA 59.791 47.619 15.58 0.00 37.29 2.57
85 86 5.259832 GTAGCTAAACCACTACGATTCCT 57.740 43.478 0.00 0.00 30.31 3.36
111 115 3.843893 TCCATGTCACCATATCAGTGG 57.156 47.619 3.22 0.00 45.04 4.00
243 247 4.517285 GGGCAGTATTTTGATCTCTCACA 58.483 43.478 0.00 0.00 0.00 3.58
330 337 8.001881 TGCTTCAACTTAAAAGTACCATGAAA 57.998 30.769 0.00 0.00 38.57 2.69
351 358 0.687757 TCCTCTACGGGCTCATGCTT 60.688 55.000 0.00 0.00 39.59 3.91
441 451 1.342174 CAGGCAGCCAATGTTCAGTTT 59.658 47.619 15.80 0.00 0.00 2.66
449 459 2.499205 CATGCCAGGCAGCCAATG 59.501 61.111 21.51 9.06 43.65 2.82
499 571 1.449246 GCTGCTGCTGACCTACTGG 60.449 63.158 10.92 0.00 36.34 4.00
545 617 2.657237 CCGTCCAGAGTCACCACC 59.343 66.667 0.00 0.00 0.00 4.61
611 683 1.067295 TGGATCAAGAGCAACTGGGT 58.933 50.000 0.00 0.00 0.00 4.51
682 764 5.852250 AGATGCCCACTCCTAAACCTAATAT 59.148 40.000 0.00 0.00 0.00 1.28
684 766 4.047883 AGATGCCCACTCCTAAACCTAAT 58.952 43.478 0.00 0.00 0.00 1.73
719 801 0.538057 AGTAGACACGTCGGGGACAA 60.538 55.000 0.00 0.00 32.09 3.18
735 817 4.097437 GTGACATGGGAAGACGATACAGTA 59.903 45.833 0.00 0.00 0.00 2.74
736 818 3.096852 TGACATGGGAAGACGATACAGT 58.903 45.455 0.00 0.00 0.00 3.55
782 878 1.666553 TTACAAGACGCAGCCGGTG 60.667 57.895 1.90 0.89 39.22 4.94
784 880 2.726691 CGTTACAAGACGCAGCCGG 61.727 63.158 0.00 0.00 39.22 6.13
794 890 0.319211 TCTGGCGTGTCCGTTACAAG 60.319 55.000 0.00 0.00 40.63 3.16
876 972 8.709386 ATAAAGAAGTGTATGTAGAAGCACAG 57.291 34.615 0.00 0.00 34.59 3.66
1191 1296 4.081406 AGTAATGTGCAAAAGGAGCATCA 58.919 39.130 0.00 0.00 44.79 3.07
1524 1629 1.200020 GCATTTTTCACACCTCCCTCG 59.800 52.381 0.00 0.00 0.00 4.63
2051 2157 1.727022 CGTTCGGCTTGCTTTGCAG 60.727 57.895 0.00 0.00 40.61 4.41
2052 2158 2.116736 CTCGTTCGGCTTGCTTTGCA 62.117 55.000 0.00 0.00 36.47 4.08
2053 2159 1.441016 CTCGTTCGGCTTGCTTTGC 60.441 57.895 0.00 0.00 0.00 3.68
2054 2160 1.441016 GCTCGTTCGGCTTGCTTTG 60.441 57.895 0.00 0.00 0.00 2.77
2055 2161 1.845809 CTGCTCGTTCGGCTTGCTTT 61.846 55.000 7.06 0.00 0.00 3.51
2056 2162 2.280797 TGCTCGTTCGGCTTGCTT 60.281 55.556 7.06 0.00 0.00 3.91
2057 2163 2.740055 CTGCTCGTTCGGCTTGCT 60.740 61.111 7.06 0.00 0.00 3.91
2058 2164 3.793144 CCTGCTCGTTCGGCTTGC 61.793 66.667 7.06 0.00 0.00 4.01
2059 2165 2.048222 TCCTGCTCGTTCGGCTTG 60.048 61.111 7.06 2.07 0.00 4.01
2060 2166 2.262915 CTCCTGCTCGTTCGGCTT 59.737 61.111 7.06 0.00 0.00 4.35
2061 2167 4.443266 GCTCCTGCTCGTTCGGCT 62.443 66.667 7.06 0.00 36.03 5.52
2113 2231 6.680874 AGTAGAGTATTACGAGGTGAACTG 57.319 41.667 0.00 0.00 0.00 3.16
2177 2297 4.939052 ACGGAGGGAGTATATTTGAGTG 57.061 45.455 0.00 0.00 0.00 3.51
2187 2307 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
2188 2308 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
2189 2309 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
2190 2310 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
2191 2311 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
2192 2312 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
2193 2313 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
2194 2314 3.947910 AGACAAGTAATTCCGAACGGA 57.052 42.857 12.04 12.04 43.52 4.69
2195 2315 3.991773 TCAAGACAAGTAATTCCGAACGG 59.008 43.478 6.94 6.94 0.00 4.44
2196 2316 5.585500 TTCAAGACAAGTAATTCCGAACG 57.415 39.130 0.00 0.00 0.00 3.95
2197 2317 8.073768 TCATTTTCAAGACAAGTAATTCCGAAC 58.926 33.333 0.00 0.00 0.00 3.95
2198 2318 8.160521 TCATTTTCAAGACAAGTAATTCCGAA 57.839 30.769 0.00 0.00 0.00 4.30
2199 2319 7.737972 TCATTTTCAAGACAAGTAATTCCGA 57.262 32.000 0.00 0.00 0.00 4.55
2200 2320 8.853345 CATTCATTTTCAAGACAAGTAATTCCG 58.147 33.333 0.00 0.00 0.00 4.30
2201 2321 9.696917 ACATTCATTTTCAAGACAAGTAATTCC 57.303 29.630 0.00 0.00 0.00 3.01
2241 2361 9.376075 CGCAGAAATGGATGTATCTAGATTTAT 57.624 33.333 11.25 5.86 0.00 1.40
2242 2362 8.585018 TCGCAGAAATGGATGTATCTAGATTTA 58.415 33.333 11.25 0.66 0.00 1.40
2243 2363 7.386299 GTCGCAGAAATGGATGTATCTAGATTT 59.614 37.037 11.25 0.00 39.69 2.17
2244 2364 6.870965 GTCGCAGAAATGGATGTATCTAGATT 59.129 38.462 11.25 0.00 39.69 2.40
2245 2365 6.015095 TGTCGCAGAAATGGATGTATCTAGAT 60.015 38.462 10.73 10.73 39.69 1.98
2246 2366 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
2247 2367 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
2248 2368 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
2249 2369 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
2250 2370 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
2251 2371 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
2252 2372 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
2253 2373 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
2254 2374 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
2255 2375 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
2256 2376 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
2257 2377 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
2258 2378 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
2259 2379 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
2260 2380 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
2261 2381 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
2262 2382 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
2263 2383 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
2264 2384 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
2265 2385 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
2266 2386 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
2267 2387 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
2268 2388 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
2269 2389 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
2270 2390 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
2271 2391 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
2272 2392 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
2273 2393 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2274 2394 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
2275 2395 1.687123 CATACTCCCTCCGTTCGGAAT 59.313 52.381 14.79 2.14 33.41 3.01
2276 2396 1.108776 CATACTCCCTCCGTTCGGAA 58.891 55.000 14.79 0.00 33.41 4.30
2277 2397 0.033796 ACATACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
2278 2398 0.384669 GACATACTCCCTCCGTTCGG 59.615 60.000 4.74 4.74 0.00 4.30
2279 2399 0.029035 CGACATACTCCCTCCGTTCG 59.971 60.000 0.00 0.00 0.00 3.95
2280 2400 1.101331 ACGACATACTCCCTCCGTTC 58.899 55.000 0.00 0.00 0.00 3.95
2281 2401 2.425143 TACGACATACTCCCTCCGTT 57.575 50.000 0.00 0.00 0.00 4.44
2282 2402 2.425143 TTACGACATACTCCCTCCGT 57.575 50.000 0.00 0.00 0.00 4.69
2283 2403 3.788333 TTTTACGACATACTCCCTCCG 57.212 47.619 0.00 0.00 0.00 4.63
2284 2404 5.048507 GTCATTTTACGACATACTCCCTCC 58.951 45.833 0.00 0.00 33.43 4.30
2285 2405 5.903810 AGTCATTTTACGACATACTCCCTC 58.096 41.667 0.00 0.00 35.77 4.30
2286 2406 5.163437 GGAGTCATTTTACGACATACTCCCT 60.163 44.000 7.26 0.00 43.67 4.20
2287 2407 5.048507 GGAGTCATTTTACGACATACTCCC 58.951 45.833 7.26 0.00 43.67 4.30
2291 2411 9.909644 ACATATAGGAGTCATTTTACGACATAC 57.090 33.333 0.00 0.00 35.77 2.39
2574 2694 3.607078 GCAGCGTTGAACTAAGGTTGAAG 60.607 47.826 2.38 0.00 37.50 3.02
2599 2731 7.455008 ACAGATACCTCCGATCCATAATAAGTT 59.545 37.037 0.00 0.00 0.00 2.66
2765 2900 5.948992 AAGAAGAGAAAGGGAAACGATTG 57.051 39.130 0.00 0.00 0.00 2.67
2870 3008 0.756903 GCCTTATACCAGAGCCCGAA 59.243 55.000 0.00 0.00 0.00 4.30
2924 3062 2.317040 GGAAGATCAGGGTACGATCCA 58.683 52.381 0.00 0.00 40.17 3.41
2930 3068 1.132500 CCCAGGGAAGATCAGGGTAC 58.868 60.000 0.00 0.00 34.75 3.34
2957 3095 0.035458 CACTTGGTCCAGTCCCAGTC 59.965 60.000 0.00 0.00 32.23 3.51
2960 3098 2.829384 GCCACTTGGTCCAGTCCCA 61.829 63.158 0.00 0.00 37.57 4.37
3014 3152 3.050619 ACACACGATCTTCACTTCGTTC 58.949 45.455 0.00 0.00 45.62 3.95
3059 3197 0.038159 GTCGTGTGAACTCCTCAGGG 60.038 60.000 0.00 0.00 33.60 4.45
3104 3242 3.525537 CGACATGGTAGCATTGTTCTCT 58.474 45.455 4.25 0.00 0.00 3.10
3177 3316 2.002586 CACTATGAAACCGGCACTCAG 58.997 52.381 0.00 0.00 0.00 3.35
3180 3319 1.808411 CACACTATGAAACCGGCACT 58.192 50.000 0.00 0.00 0.00 4.40
3208 3347 4.139786 CTGATGATATGGACACAAAGGGG 58.860 47.826 0.00 0.00 0.00 4.79
3311 5981 6.612247 ACATCAGTTTCGTTCACAACAATA 57.388 33.333 0.00 0.00 0.00 1.90
3474 6144 6.876155 TGAATCCAATGGTATTGATTTGGTG 58.124 36.000 0.00 0.00 39.67 4.17
3582 6266 5.532406 GCAATGATCAAGTTCCATAGCCTAA 59.468 40.000 0.00 0.00 0.00 2.69
3583 6267 5.065914 GCAATGATCAAGTTCCATAGCCTA 58.934 41.667 0.00 0.00 0.00 3.93
3586 6270 4.906065 TGCAATGATCAAGTTCCATAGC 57.094 40.909 0.00 0.00 0.00 2.97
3590 6274 6.522946 TGAATTTTGCAATGATCAAGTTCCA 58.477 32.000 0.00 0.00 0.00 3.53
3591 6275 6.091713 CCTGAATTTTGCAATGATCAAGTTCC 59.908 38.462 0.00 0.00 0.00 3.62
3592 6276 6.401796 GCCTGAATTTTGCAATGATCAAGTTC 60.402 38.462 0.00 0.00 0.00 3.01
3593 6277 5.410439 GCCTGAATTTTGCAATGATCAAGTT 59.590 36.000 0.00 0.00 0.00 2.66
3594 6278 4.933400 GCCTGAATTTTGCAATGATCAAGT 59.067 37.500 0.00 0.00 0.00 3.16
3595 6279 5.175859 AGCCTGAATTTTGCAATGATCAAG 58.824 37.500 0.00 0.28 0.00 3.02
3596 6280 5.155278 AGCCTGAATTTTGCAATGATCAA 57.845 34.783 0.00 0.00 0.00 2.57
3597 6281 4.811969 AGCCTGAATTTTGCAATGATCA 57.188 36.364 0.00 0.00 0.00 2.92
3598 6282 5.172934 TGAAGCCTGAATTTTGCAATGATC 58.827 37.500 0.00 0.00 0.00 2.92
3599 6283 5.155278 TGAAGCCTGAATTTTGCAATGAT 57.845 34.783 0.00 0.00 0.00 2.45
3600 6284 4.603989 TGAAGCCTGAATTTTGCAATGA 57.396 36.364 0.00 0.00 0.00 2.57
3601 6285 6.971527 TTATGAAGCCTGAATTTTGCAATG 57.028 33.333 0.00 0.00 0.00 2.82
3602 6286 9.268268 CATATTATGAAGCCTGAATTTTGCAAT 57.732 29.630 0.00 0.00 0.00 3.56
3603 6287 7.225145 GCATATTATGAAGCCTGAATTTTGCAA 59.775 33.333 7.87 0.00 0.00 4.08
3604 6288 6.702723 GCATATTATGAAGCCTGAATTTTGCA 59.297 34.615 7.87 0.00 0.00 4.08
3605 6289 6.702723 TGCATATTATGAAGCCTGAATTTTGC 59.297 34.615 7.87 0.00 0.00 3.68
3606 6290 7.170320 GGTGCATATTATGAAGCCTGAATTTTG 59.830 37.037 7.87 0.00 29.89 2.44
3607 6291 7.070322 AGGTGCATATTATGAAGCCTGAATTTT 59.930 33.333 9.75 0.00 36.99 1.82
3608 6292 6.552350 AGGTGCATATTATGAAGCCTGAATTT 59.448 34.615 9.75 0.00 36.99 1.82
3609 6293 6.073314 AGGTGCATATTATGAAGCCTGAATT 58.927 36.000 9.75 0.00 36.99 2.17
3610 6294 5.638133 AGGTGCATATTATGAAGCCTGAAT 58.362 37.500 9.75 0.00 36.99 2.57
3611 6295 5.052693 AGGTGCATATTATGAAGCCTGAA 57.947 39.130 9.75 0.00 36.99 3.02
3612 6296 4.349048 AGAGGTGCATATTATGAAGCCTGA 59.651 41.667 9.75 0.00 36.99 3.86
3613 6297 4.649692 AGAGGTGCATATTATGAAGCCTG 58.350 43.478 9.75 0.00 36.99 4.85
3614 6298 4.989875 AGAGGTGCATATTATGAAGCCT 57.010 40.909 9.75 10.69 36.99 4.58
3615 6299 6.176183 ACATAGAGGTGCATATTATGAAGCC 58.824 40.000 9.75 6.80 36.99 4.35
3616 6300 7.010923 GCTACATAGAGGTGCATATTATGAAGC 59.989 40.741 7.87 6.79 36.55 3.86
3617 6301 8.037166 TGCTACATAGAGGTGCATATTATGAAG 58.963 37.037 7.87 0.00 0.00 3.02
3618 6302 7.906327 TGCTACATAGAGGTGCATATTATGAA 58.094 34.615 7.87 0.00 0.00 2.57
3619 6303 7.480760 TGCTACATAGAGGTGCATATTATGA 57.519 36.000 7.87 0.00 0.00 2.15
3620 6304 8.202811 AGATGCTACATAGAGGTGCATATTATG 58.797 37.037 0.00 0.00 43.28 1.90
3621 6305 8.316497 AGATGCTACATAGAGGTGCATATTAT 57.684 34.615 0.00 0.00 43.28 1.28
3622 6306 7.724490 AGATGCTACATAGAGGTGCATATTA 57.276 36.000 0.00 0.00 43.28 0.98
3623 6307 6.617782 AGATGCTACATAGAGGTGCATATT 57.382 37.500 0.00 0.00 43.28 1.28
3624 6308 6.212187 TCAAGATGCTACATAGAGGTGCATAT 59.788 38.462 0.00 0.00 43.28 1.78
3625 6309 5.539955 TCAAGATGCTACATAGAGGTGCATA 59.460 40.000 0.00 0.00 43.28 3.14
3626 6310 4.346127 TCAAGATGCTACATAGAGGTGCAT 59.654 41.667 0.00 0.00 45.48 3.96
3627 6311 3.706086 TCAAGATGCTACATAGAGGTGCA 59.294 43.478 0.00 0.00 38.05 4.57
3628 6312 4.305769 CTCAAGATGCTACATAGAGGTGC 58.694 47.826 0.00 0.00 0.00 5.01
3629 6313 4.262377 CCCTCAAGATGCTACATAGAGGTG 60.262 50.000 15.94 8.49 39.55 4.00
3630 6314 3.900601 CCCTCAAGATGCTACATAGAGGT 59.099 47.826 15.94 0.00 39.55 3.85
3631 6315 3.900601 ACCCTCAAGATGCTACATAGAGG 59.099 47.826 12.67 12.67 40.58 3.69
3632 6316 5.543507 AACCCTCAAGATGCTACATAGAG 57.456 43.478 0.00 0.00 0.00 2.43
3633 6317 5.396772 CCAAACCCTCAAGATGCTACATAGA 60.397 44.000 0.00 0.00 0.00 1.98
3634 6318 4.818546 CCAAACCCTCAAGATGCTACATAG 59.181 45.833 0.00 0.00 0.00 2.23
3635 6319 4.227300 ACCAAACCCTCAAGATGCTACATA 59.773 41.667 0.00 0.00 0.00 2.29
3636 6320 3.010584 ACCAAACCCTCAAGATGCTACAT 59.989 43.478 0.00 0.00 0.00 2.29
3637 6321 2.375174 ACCAAACCCTCAAGATGCTACA 59.625 45.455 0.00 0.00 0.00 2.74
3638 6322 3.010420 GACCAAACCCTCAAGATGCTAC 58.990 50.000 0.00 0.00 0.00 3.58
3639 6323 2.642311 TGACCAAACCCTCAAGATGCTA 59.358 45.455 0.00 0.00 0.00 3.49
3640 6324 1.425066 TGACCAAACCCTCAAGATGCT 59.575 47.619 0.00 0.00 0.00 3.79
3641 6325 1.909700 TGACCAAACCCTCAAGATGC 58.090 50.000 0.00 0.00 0.00 3.91
3642 6326 2.821969 CCTTGACCAAACCCTCAAGATG 59.178 50.000 8.63 0.00 44.22 2.90
3643 6327 2.716424 TCCTTGACCAAACCCTCAAGAT 59.284 45.455 8.63 0.00 44.22 2.40
3644 6328 2.131854 TCCTTGACCAAACCCTCAAGA 58.868 47.619 8.63 0.00 44.22 3.02
3645 6329 2.158608 AGTCCTTGACCAAACCCTCAAG 60.159 50.000 0.00 0.00 42.08 3.02
3646 6330 1.850345 AGTCCTTGACCAAACCCTCAA 59.150 47.619 0.00 0.00 32.18 3.02
3647 6331 1.142870 CAGTCCTTGACCAAACCCTCA 59.857 52.381 0.00 0.00 32.18 3.86
3648 6332 1.545651 CCAGTCCTTGACCAAACCCTC 60.546 57.143 0.00 0.00 32.18 4.30
3649 6333 0.478507 CCAGTCCTTGACCAAACCCT 59.521 55.000 0.00 0.00 32.18 4.34
3650 6334 0.185175 ACCAGTCCTTGACCAAACCC 59.815 55.000 0.00 0.00 32.18 4.11
3651 6335 1.318576 CACCAGTCCTTGACCAAACC 58.681 55.000 0.00 0.00 32.18 3.27
3652 6336 1.133915 TCCACCAGTCCTTGACCAAAC 60.134 52.381 0.00 0.00 32.18 2.93
3653 6337 1.133915 GTCCACCAGTCCTTGACCAAA 60.134 52.381 0.00 0.00 32.18 3.28
3654 6338 0.472471 GTCCACCAGTCCTTGACCAA 59.528 55.000 0.00 0.00 32.18 3.67
3655 6339 0.692756 TGTCCACCAGTCCTTGACCA 60.693 55.000 0.00 0.00 32.18 4.02
3656 6340 0.472471 TTGTCCACCAGTCCTTGACC 59.528 55.000 0.00 0.00 32.18 4.02
3657 6341 2.341846 TTTGTCCACCAGTCCTTGAC 57.658 50.000 0.00 0.00 0.00 3.18
3658 6342 3.009033 CCTATTTGTCCACCAGTCCTTGA 59.991 47.826 0.00 0.00 0.00 3.02
3659 6343 3.009033 TCCTATTTGTCCACCAGTCCTTG 59.991 47.826 0.00 0.00 0.00 3.61
3660 6344 3.009143 GTCCTATTTGTCCACCAGTCCTT 59.991 47.826 0.00 0.00 0.00 3.36
3661 6345 2.572104 GTCCTATTTGTCCACCAGTCCT 59.428 50.000 0.00 0.00 0.00 3.85
3662 6346 2.355818 GGTCCTATTTGTCCACCAGTCC 60.356 54.545 0.00 0.00 0.00 3.85
3663 6347 2.677037 CGGTCCTATTTGTCCACCAGTC 60.677 54.545 0.00 0.00 0.00 3.51
3664 6348 1.278127 CGGTCCTATTTGTCCACCAGT 59.722 52.381 0.00 0.00 0.00 4.00
3665 6349 1.406887 CCGGTCCTATTTGTCCACCAG 60.407 57.143 0.00 0.00 0.00 4.00
3666 6350 0.616371 CCGGTCCTATTTGTCCACCA 59.384 55.000 0.00 0.00 0.00 4.17
3667 6351 0.746923 GCCGGTCCTATTTGTCCACC 60.747 60.000 1.90 0.00 0.00 4.61
3668 6352 1.087771 CGCCGGTCCTATTTGTCCAC 61.088 60.000 1.90 0.00 0.00 4.02
3669 6353 1.219664 CGCCGGTCCTATTTGTCCA 59.780 57.895 1.90 0.00 0.00 4.02
3670 6354 2.178235 GCGCCGGTCCTATTTGTCC 61.178 63.158 1.90 0.00 0.00 4.02
3671 6355 1.429148 CTGCGCCGGTCCTATTTGTC 61.429 60.000 4.18 0.00 0.00 3.18
3672 6356 1.449601 CTGCGCCGGTCCTATTTGT 60.450 57.895 4.18 0.00 0.00 2.83
3673 6357 2.180204 CCTGCGCCGGTCCTATTTG 61.180 63.158 10.08 0.00 0.00 2.32
3674 6358 2.189521 CCTGCGCCGGTCCTATTT 59.810 61.111 10.08 0.00 0.00 1.40
3675 6359 2.762459 TCCTGCGCCGGTCCTATT 60.762 61.111 17.97 0.00 0.00 1.73
3676 6360 3.227276 CTCCTGCGCCGGTCCTAT 61.227 66.667 17.97 0.00 0.00 2.57
3677 6361 4.753662 ACTCCTGCGCCGGTCCTA 62.754 66.667 17.97 0.00 0.00 2.94
3686 6370 4.760047 CCGTTGGGGACTCCTGCG 62.760 72.222 0.00 0.00 38.47 5.18
3696 6380 2.755469 CATGGCCTTCCCGTTGGG 60.755 66.667 3.32 0.00 46.11 4.12
3697 6381 2.755469 CCATGGCCTTCCCGTTGG 60.755 66.667 3.32 0.00 35.87 3.77
3698 6382 3.451894 GCCATGGCCTTCCCGTTG 61.452 66.667 27.24 0.00 35.87 4.10
3708 6392 0.475906 ATGGTTAGAGAGGCCATGGC 59.524 55.000 29.47 29.47 41.05 4.40
3711 6395 1.419387 GAGCATGGTTAGAGAGGCCAT 59.581 52.381 5.01 0.00 43.14 4.40
3712 6396 0.833287 GAGCATGGTTAGAGAGGCCA 59.167 55.000 5.01 0.00 36.64 5.36
3713 6397 0.249657 CGAGCATGGTTAGAGAGGCC 60.250 60.000 0.00 0.00 0.00 5.19
3714 6398 0.461961 ACGAGCATGGTTAGAGAGGC 59.538 55.000 0.00 0.00 0.00 4.70
3715 6399 2.028130 AGACGAGCATGGTTAGAGAGG 58.972 52.381 0.00 0.00 0.00 3.69
3716 6400 2.685388 TGAGACGAGCATGGTTAGAGAG 59.315 50.000 0.00 0.00 0.00 3.20
3717 6401 2.723273 TGAGACGAGCATGGTTAGAGA 58.277 47.619 0.00 0.00 0.00 3.10
3718 6402 3.379240 CATGAGACGAGCATGGTTAGAG 58.621 50.000 0.00 0.00 39.48 2.43
3719 6403 3.443099 CATGAGACGAGCATGGTTAGA 57.557 47.619 0.00 0.00 39.48 2.10
3732 6416 2.484264 CGTTCCAAAAGGTCCATGAGAC 59.516 50.000 0.00 0.00 45.51 3.36
3733 6417 2.370519 TCGTTCCAAAAGGTCCATGAGA 59.629 45.455 0.00 0.00 0.00 3.27
3734 6418 2.744202 CTCGTTCCAAAAGGTCCATGAG 59.256 50.000 0.00 0.00 0.00 2.90
3735 6419 2.105821 ACTCGTTCCAAAAGGTCCATGA 59.894 45.455 0.00 0.00 0.00 3.07
3736 6420 2.226437 CACTCGTTCCAAAAGGTCCATG 59.774 50.000 0.00 0.00 0.00 3.66
3737 6421 2.504367 CACTCGTTCCAAAAGGTCCAT 58.496 47.619 0.00 0.00 0.00 3.41
3738 6422 1.476110 CCACTCGTTCCAAAAGGTCCA 60.476 52.381 0.00 0.00 0.00 4.02
3739 6423 1.202722 TCCACTCGTTCCAAAAGGTCC 60.203 52.381 0.00 0.00 0.00 4.46
3740 6424 2.249844 TCCACTCGTTCCAAAAGGTC 57.750 50.000 0.00 0.00 0.00 3.85
3741 6425 2.294979 GTTCCACTCGTTCCAAAAGGT 58.705 47.619 0.00 0.00 0.00 3.50
3742 6426 1.263217 CGTTCCACTCGTTCCAAAAGG 59.737 52.381 0.00 0.00 0.00 3.11
3743 6427 1.333791 GCGTTCCACTCGTTCCAAAAG 60.334 52.381 0.00 0.00 0.00 2.27
3744 6428 0.658897 GCGTTCCACTCGTTCCAAAA 59.341 50.000 0.00 0.00 0.00 2.44
3745 6429 1.161563 GGCGTTCCACTCGTTCCAAA 61.162 55.000 0.00 0.00 0.00 3.28
3746 6430 1.595929 GGCGTTCCACTCGTTCCAA 60.596 57.895 0.00 0.00 0.00 3.53
3747 6431 2.029964 GGCGTTCCACTCGTTCCA 59.970 61.111 0.00 0.00 0.00 3.53
3748 6432 2.741211 GGGCGTTCCACTCGTTCC 60.741 66.667 0.00 0.00 35.00 3.62
3749 6433 2.029964 TGGGCGTTCCACTCGTTC 59.970 61.111 0.00 0.00 41.46 3.95
3756 6440 4.819362 GTCAGAAGACATGGGCGTTCCA 62.819 54.545 0.00 2.29 44.34 3.53
3757 6441 0.036388 TCAGAAGACATGGGCGTTCC 60.036 55.000 0.00 0.00 0.00 3.62
3758 6442 1.079503 GTCAGAAGACATGGGCGTTC 58.920 55.000 0.00 0.00 44.34 3.95
3759 6443 0.670546 CGTCAGAAGACATGGGCGTT 60.671 55.000 0.00 0.00 45.23 4.84
3760 6444 1.079819 CGTCAGAAGACATGGGCGT 60.080 57.895 0.00 0.00 45.23 5.68
3761 6445 2.456119 GCGTCAGAAGACATGGGCG 61.456 63.158 0.00 0.00 45.23 6.13
3762 6446 0.955428 TTGCGTCAGAAGACATGGGC 60.955 55.000 0.00 0.00 45.23 5.36
3763 6447 1.081892 CTTGCGTCAGAAGACATGGG 58.918 55.000 0.00 0.00 45.23 4.00
3764 6448 1.998315 CTCTTGCGTCAGAAGACATGG 59.002 52.381 0.00 0.00 45.23 3.66
3765 6449 2.411069 CACTCTTGCGTCAGAAGACATG 59.589 50.000 0.00 0.00 45.23 3.21
3766 6450 2.681706 CACTCTTGCGTCAGAAGACAT 58.318 47.619 0.00 0.00 45.23 3.06
3767 6451 1.869754 GCACTCTTGCGTCAGAAGACA 60.870 52.381 0.00 0.00 45.23 3.41
3768 6452 0.787183 GCACTCTTGCGTCAGAAGAC 59.213 55.000 0.00 0.00 39.50 3.01
3769 6453 3.201342 GCACTCTTGCGTCAGAAGA 57.799 52.632 0.00 0.00 39.50 2.87
3779 6463 0.179020 TTGGTGGTGGAGCACTCTTG 60.179 55.000 8.75 0.00 34.40 3.02
3780 6464 0.773644 ATTGGTGGTGGAGCACTCTT 59.226 50.000 8.75 0.00 34.40 2.85
3781 6465 0.326264 GATTGGTGGTGGAGCACTCT 59.674 55.000 8.75 0.00 34.40 3.24
3782 6466 0.326264 AGATTGGTGGTGGAGCACTC 59.674 55.000 8.75 0.00 34.40 3.51
3783 6467 0.773644 AAGATTGGTGGTGGAGCACT 59.226 50.000 8.75 0.00 34.40 4.40
3784 6468 0.883833 CAAGATTGGTGGTGGAGCAC 59.116 55.000 0.15 0.15 0.00 4.40
3785 6469 0.895100 GCAAGATTGGTGGTGGAGCA 60.895 55.000 0.00 0.00 0.00 4.26
3786 6470 0.610232 AGCAAGATTGGTGGTGGAGC 60.610 55.000 0.00 0.00 37.53 4.70
3787 6471 2.787473 TAGCAAGATTGGTGGTGGAG 57.213 50.000 7.50 0.00 39.55 3.86
3788 6472 3.153919 GTTTAGCAAGATTGGTGGTGGA 58.846 45.455 7.50 0.00 39.55 4.02
3789 6473 2.231235 GGTTTAGCAAGATTGGTGGTGG 59.769 50.000 7.50 0.00 39.55 4.61
3790 6474 2.890311 TGGTTTAGCAAGATTGGTGGTG 59.110 45.455 7.50 0.00 39.55 4.17
3791 6475 2.890945 GTGGTTTAGCAAGATTGGTGGT 59.109 45.455 7.50 0.00 39.55 4.16
3792 6476 2.890311 TGTGGTTTAGCAAGATTGGTGG 59.110 45.455 7.50 0.00 39.55 4.61
3793 6477 4.218200 TGATGTGGTTTAGCAAGATTGGTG 59.782 41.667 7.50 0.00 39.55 4.17
3794 6478 4.218417 GTGATGTGGTTTAGCAAGATTGGT 59.782 41.667 2.51 2.51 42.29 3.67
3795 6479 4.380867 GGTGATGTGGTTTAGCAAGATTGG 60.381 45.833 0.00 0.00 0.00 3.16
3796 6480 4.380867 GGGTGATGTGGTTTAGCAAGATTG 60.381 45.833 0.00 0.00 0.00 2.67
3797 6481 3.763897 GGGTGATGTGGTTTAGCAAGATT 59.236 43.478 0.00 0.00 0.00 2.40
3798 6482 3.356290 GGGTGATGTGGTTTAGCAAGAT 58.644 45.455 0.00 0.00 0.00 2.40
3799 6483 2.790433 GGGTGATGTGGTTTAGCAAGA 58.210 47.619 0.00 0.00 0.00 3.02
3800 6484 1.468520 CGGGTGATGTGGTTTAGCAAG 59.531 52.381 0.00 0.00 0.00 4.01
3801 6485 1.529226 CGGGTGATGTGGTTTAGCAA 58.471 50.000 0.00 0.00 0.00 3.91
3802 6486 0.958382 GCGGGTGATGTGGTTTAGCA 60.958 55.000 0.00 0.00 0.00 3.49
3803 6487 1.800681 GCGGGTGATGTGGTTTAGC 59.199 57.895 0.00 0.00 0.00 3.09
3804 6488 0.390603 TCGCGGGTGATGTGGTTTAG 60.391 55.000 6.13 0.00 0.00 1.85
3805 6489 0.390603 CTCGCGGGTGATGTGGTTTA 60.391 55.000 6.13 0.00 0.00 2.01
3806 6490 1.671054 CTCGCGGGTGATGTGGTTT 60.671 57.895 6.13 0.00 0.00 3.27
3807 6491 2.047274 CTCGCGGGTGATGTGGTT 60.047 61.111 6.13 0.00 0.00 3.67
3808 6492 4.082523 CCTCGCGGGTGATGTGGT 62.083 66.667 4.71 0.00 0.00 4.16
3810 6494 4.758251 TGCCTCGCGGGTGATGTG 62.758 66.667 4.71 0.00 37.43 3.21
3811 6495 3.545124 TTTGCCTCGCGGGTGATGT 62.545 57.895 4.71 0.00 37.43 3.06
3812 6496 2.745884 TTTGCCTCGCGGGTGATG 60.746 61.111 4.71 0.00 37.43 3.07
3813 6497 2.746277 GTTTGCCTCGCGGGTGAT 60.746 61.111 4.71 0.00 37.43 3.06
3814 6498 2.951475 AAAGTTTGCCTCGCGGGTGA 62.951 55.000 4.71 0.00 37.43 4.02
3815 6499 2.070654 AAAAGTTTGCCTCGCGGGTG 62.071 55.000 4.71 0.00 37.43 4.61
3816 6500 1.826487 AAAAGTTTGCCTCGCGGGT 60.826 52.632 4.71 0.00 37.43 5.28
3817 6501 1.371635 CAAAAGTTTGCCTCGCGGG 60.372 57.895 6.13 0.59 38.36 6.13
3818 6502 0.030101 TTCAAAAGTTTGCCTCGCGG 59.970 50.000 6.13 0.00 38.05 6.46
3819 6503 1.978782 GATTCAAAAGTTTGCCTCGCG 59.021 47.619 0.00 0.00 38.05 5.87
3820 6504 2.726241 GTGATTCAAAAGTTTGCCTCGC 59.274 45.455 0.00 2.16 38.05 5.03
3821 6505 3.308530 GGTGATTCAAAAGTTTGCCTCG 58.691 45.455 0.00 0.00 38.05 4.63
3822 6506 3.308530 CGGTGATTCAAAAGTTTGCCTC 58.691 45.455 0.00 0.01 38.05 4.70
3823 6507 2.545742 GCGGTGATTCAAAAGTTTGCCT 60.546 45.455 0.00 0.00 38.05 4.75
3824 6508 1.792367 GCGGTGATTCAAAAGTTTGCC 59.208 47.619 0.00 0.00 38.05 4.52
3825 6509 1.792367 GGCGGTGATTCAAAAGTTTGC 59.208 47.619 0.00 0.00 38.05 3.68
3826 6510 2.050691 CGGCGGTGATTCAAAAGTTTG 58.949 47.619 0.00 0.00 39.48 2.93
3827 6511 1.000717 CCGGCGGTGATTCAAAAGTTT 60.001 47.619 19.97 0.00 0.00 2.66
3828 6512 0.596082 CCGGCGGTGATTCAAAAGTT 59.404 50.000 19.97 0.00 0.00 2.66
3829 6513 0.250553 TCCGGCGGTGATTCAAAAGT 60.251 50.000 27.32 0.00 0.00 2.66
3830 6514 0.447801 CTCCGGCGGTGATTCAAAAG 59.552 55.000 27.32 8.56 0.00 2.27
3831 6515 0.250553 ACTCCGGCGGTGATTCAAAA 60.251 50.000 32.12 6.50 0.00 2.44
3832 6516 0.250553 AACTCCGGCGGTGATTCAAA 60.251 50.000 32.12 7.28 0.00 2.69
3833 6517 0.609151 TAACTCCGGCGGTGATTCAA 59.391 50.000 32.12 8.08 0.00 2.69
3834 6518 0.609151 TTAACTCCGGCGGTGATTCA 59.391 50.000 32.12 8.87 0.00 2.57
3835 6519 1.134907 TCTTAACTCCGGCGGTGATTC 60.135 52.381 32.12 0.00 0.00 2.52
3836 6520 0.899720 TCTTAACTCCGGCGGTGATT 59.100 50.000 32.12 22.73 0.00 2.57
3837 6521 0.899720 TTCTTAACTCCGGCGGTGAT 59.100 50.000 32.12 23.53 0.00 3.06
3838 6522 0.680618 TTTCTTAACTCCGGCGGTGA 59.319 50.000 32.12 11.27 0.00 4.02
3839 6523 1.734163 ATTTCTTAACTCCGGCGGTG 58.266 50.000 27.32 26.06 0.00 4.94
3840 6524 2.484742 AATTTCTTAACTCCGGCGGT 57.515 45.000 27.32 9.60 0.00 5.68
3841 6525 2.870411 CCTAATTTCTTAACTCCGGCGG 59.130 50.000 22.51 22.51 0.00 6.13
3842 6526 3.788937 TCCTAATTTCTTAACTCCGGCG 58.211 45.455 0.00 0.00 0.00 6.46
3843 6527 6.694877 ATTTCCTAATTTCTTAACTCCGGC 57.305 37.500 0.00 0.00 0.00 6.13
3861 6545 9.899226 GGATTACTTGCACAAGATAATATTTCC 57.101 33.333 16.95 10.53 40.79 3.13
3865 6549 9.851686 TGAAGGATTACTTGCACAAGATAATAT 57.148 29.630 16.95 7.05 40.21 1.28
3866 6550 9.851686 ATGAAGGATTACTTGCACAAGATAATA 57.148 29.630 16.95 0.00 40.21 0.98
3867 6551 8.627403 CATGAAGGATTACTTGCACAAGATAAT 58.373 33.333 16.95 14.72 40.21 1.28
3868 6552 7.415541 GCATGAAGGATTACTTGCACAAGATAA 60.416 37.037 16.95 11.25 40.21 1.75
3869 6553 6.038603 GCATGAAGGATTACTTGCACAAGATA 59.961 38.462 16.95 4.79 40.21 1.98
3870 6554 5.163581 GCATGAAGGATTACTTGCACAAGAT 60.164 40.000 16.95 1.03 40.21 2.40
3871 6555 4.156556 GCATGAAGGATTACTTGCACAAGA 59.843 41.667 16.95 0.00 40.21 3.02
3872 6556 4.418392 GCATGAAGGATTACTTGCACAAG 58.582 43.478 8.82 8.82 40.21 3.16
3873 6557 3.193267 GGCATGAAGGATTACTTGCACAA 59.807 43.478 0.00 0.00 40.21 3.33
3874 6558 2.754552 GGCATGAAGGATTACTTGCACA 59.245 45.455 0.00 0.00 40.21 4.57
3875 6559 2.223340 CGGCATGAAGGATTACTTGCAC 60.223 50.000 0.00 0.00 40.21 4.57
3876 6560 2.016318 CGGCATGAAGGATTACTTGCA 58.984 47.619 0.00 0.00 40.21 4.08
3877 6561 2.017049 ACGGCATGAAGGATTACTTGC 58.983 47.619 0.00 0.00 40.21 4.01
3878 6562 3.009723 ACACGGCATGAAGGATTACTTG 58.990 45.455 0.00 0.00 40.21 3.16
3879 6563 3.350219 ACACGGCATGAAGGATTACTT 57.650 42.857 0.00 0.00 43.65 2.24
3880 6564 4.481368 TTACACGGCATGAAGGATTACT 57.519 40.909 0.00 0.00 0.00 2.24
3881 6565 5.123344 ACTTTTACACGGCATGAAGGATTAC 59.877 40.000 0.00 0.00 0.00 1.89
3882 6566 5.123186 CACTTTTACACGGCATGAAGGATTA 59.877 40.000 0.00 0.00 0.00 1.75
3883 6567 4.079253 ACTTTTACACGGCATGAAGGATT 58.921 39.130 0.00 0.00 0.00 3.01
3884 6568 3.440173 CACTTTTACACGGCATGAAGGAT 59.560 43.478 0.00 0.00 0.00 3.24
3885 6569 2.811431 CACTTTTACACGGCATGAAGGA 59.189 45.455 0.00 0.00 0.00 3.36
3886 6570 2.552315 ACACTTTTACACGGCATGAAGG 59.448 45.455 0.00 0.00 0.00 3.46
3887 6571 3.003275 ACACACTTTTACACGGCATGAAG 59.997 43.478 0.00 0.00 0.00 3.02
3888 6572 2.946329 ACACACTTTTACACGGCATGAA 59.054 40.909 0.00 0.00 0.00 2.57
3889 6573 2.546368 GACACACTTTTACACGGCATGA 59.454 45.455 0.00 0.00 0.00 3.07
3890 6574 2.350388 GGACACACTTTTACACGGCATG 60.350 50.000 0.00 0.00 0.00 4.06
3891 6575 1.877443 GGACACACTTTTACACGGCAT 59.123 47.619 0.00 0.00 0.00 4.40
3892 6576 1.134340 AGGACACACTTTTACACGGCA 60.134 47.619 0.00 0.00 0.00 5.69
3893 6577 1.589803 AGGACACACTTTTACACGGC 58.410 50.000 0.00 0.00 0.00 5.68
3894 6578 2.940410 ACAAGGACACACTTTTACACGG 59.060 45.455 0.00 0.00 0.00 4.94
3895 6579 5.521010 TCTTACAAGGACACACTTTTACACG 59.479 40.000 0.00 0.00 0.00 4.49
3896 6580 6.913873 TCTTACAAGGACACACTTTTACAC 57.086 37.500 0.00 0.00 0.00 2.90
3897 6581 7.608761 AGTTTCTTACAAGGACACACTTTTACA 59.391 33.333 0.00 0.00 0.00 2.41
3898 6582 7.982224 AGTTTCTTACAAGGACACACTTTTAC 58.018 34.615 0.00 0.00 0.00 2.01
3899 6583 8.570068 AAGTTTCTTACAAGGACACACTTTTA 57.430 30.769 0.00 0.00 0.00 1.52
3900 6584 7.462571 AAGTTTCTTACAAGGACACACTTTT 57.537 32.000 0.00 0.00 0.00 2.27
3901 6585 7.393515 AGAAAGTTTCTTACAAGGACACACTTT 59.606 33.333 12.50 0.00 36.36 2.66
3902 6586 6.884836 AGAAAGTTTCTTACAAGGACACACTT 59.115 34.615 12.50 0.00 36.36 3.16
3903 6587 6.415573 AGAAAGTTTCTTACAAGGACACACT 58.584 36.000 12.50 0.00 36.36 3.55
3904 6588 6.679327 AGAAAGTTTCTTACAAGGACACAC 57.321 37.500 12.50 0.00 36.36 3.82
3925 6609 9.784531 CCTCATCTATTAATTAAGCCAAGAAGA 57.215 33.333 3.94 5.96 0.00 2.87
3926 6610 8.510505 GCCTCATCTATTAATTAAGCCAAGAAG 58.489 37.037 3.94 2.42 0.00 2.85
3927 6611 7.998383 TGCCTCATCTATTAATTAAGCCAAGAA 59.002 33.333 3.94 0.00 0.00 2.52
3928 6612 7.517320 TGCCTCATCTATTAATTAAGCCAAGA 58.483 34.615 3.94 4.81 0.00 3.02
3929 6613 7.750229 TGCCTCATCTATTAATTAAGCCAAG 57.250 36.000 3.94 0.00 0.00 3.61
3930 6614 8.532186 TTTGCCTCATCTATTAATTAAGCCAA 57.468 30.769 3.94 0.00 0.00 4.52
3931 6615 8.710749 ATTTGCCTCATCTATTAATTAAGCCA 57.289 30.769 3.94 0.00 0.00 4.75
3932 6616 9.018582 AGATTTGCCTCATCTATTAATTAAGCC 57.981 33.333 3.94 0.00 0.00 4.35
3937 6621 9.538508 GCAAAAGATTTGCCTCATCTATTAATT 57.461 29.630 15.12 0.00 39.38 1.40
3951 6635 4.794248 AAAACGAAGGCAAAAGATTTGC 57.206 36.364 17.18 17.18 44.22 3.68
3983 6667 9.840427 GCATATTAGCTTTGAAGTCAAACTTTA 57.160 29.630 2.32 3.33 38.80 1.85
3984 6668 7.538678 CGCATATTAGCTTTGAAGTCAAACTTT 59.461 33.333 2.32 0.00 38.80 2.66
3985 6669 7.023575 CGCATATTAGCTTTGAAGTCAAACTT 58.976 34.615 2.32 0.00 41.95 2.66
3986 6670 6.403636 CCGCATATTAGCTTTGAAGTCAAACT 60.404 38.462 2.32 7.85 40.55 2.66
3987 6671 5.739161 CCGCATATTAGCTTTGAAGTCAAAC 59.261 40.000 2.32 1.41 40.55 2.93
3988 6672 5.645929 TCCGCATATTAGCTTTGAAGTCAAA 59.354 36.000 6.33 6.33 42.90 2.69
3989 6673 5.182487 TCCGCATATTAGCTTTGAAGTCAA 58.818 37.500 0.00 0.00 0.00 3.18
3990 6674 4.765273 TCCGCATATTAGCTTTGAAGTCA 58.235 39.130 0.00 0.00 0.00 3.41
3991 6675 4.811557 ACTCCGCATATTAGCTTTGAAGTC 59.188 41.667 0.00 0.00 0.00 3.01
3992 6676 4.770795 ACTCCGCATATTAGCTTTGAAGT 58.229 39.130 0.00 0.00 0.00 3.01
3993 6677 6.844696 TTACTCCGCATATTAGCTTTGAAG 57.155 37.500 0.00 0.00 0.00 3.02
3994 6678 7.801716 ATTTACTCCGCATATTAGCTTTGAA 57.198 32.000 0.00 0.00 0.00 2.69
4042 6728 1.868498 CAAACCATTTTGCTGGCTGTG 59.132 47.619 0.00 0.00 40.15 3.66
4070 6756 1.072116 CATCACCAAATGGCAACGCG 61.072 55.000 3.53 3.53 39.32 6.01
4205 6891 0.041535 TGGTACATACGTCCCCAGGT 59.958 55.000 0.00 0.00 0.00 4.00
4226 6912 7.303261 AGTTTAACTTAAATAGCAAACGGAGC 58.697 34.615 0.00 0.00 37.26 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.