Multiple sequence alignment - TraesCS4B01G103000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G103000 chr4B 100.000 4427 0 0 1 4427 109217837 109222263 0.000000e+00 8176.0
1 TraesCS4B01G103000 chr4B 89.796 98 10 0 3787 3884 461690437 461690534 4.650000e-25 126.0
2 TraesCS4B01G103000 chr4D 93.435 1904 112 10 1670 3566 76835552 76833655 0.000000e+00 2811.0
3 TraesCS4B01G103000 chr4D 92.325 899 51 13 795 1681 76836472 76835580 0.000000e+00 1262.0
4 TraesCS4B01G103000 chr4D 90.250 400 21 8 3879 4277 76833561 76833179 1.420000e-139 507.0
5 TraesCS4B01G103000 chr4D 85.563 471 41 10 40 488 76837046 76836581 6.700000e-128 468.0
6 TraesCS4B01G103000 chr4D 94.545 110 4 2 3632 3739 76833672 76833563 7.620000e-38 169.0
7 TraesCS4B01G103000 chr4A 92.417 1767 101 19 798 2558 511024712 511022973 0.000000e+00 2490.0
8 TraesCS4B01G103000 chr4A 92.599 554 35 3 3018 3566 511022517 511021965 0.000000e+00 791.0
9 TraesCS4B01G103000 chr4A 86.224 392 34 16 3826 4214 511021847 511021473 1.480000e-109 407.0
10 TraesCS4B01G103000 chr4A 93.839 211 13 0 40 250 511025209 511024999 7.150000e-83 318.0
11 TraesCS4B01G103000 chr4A 88.776 196 16 5 2600 2794 511022769 511022579 7.400000e-58 235.0
12 TraesCS4B01G103000 chr4A 97.638 127 3 0 363 489 511024953 511024827 7.460000e-53 219.0
13 TraesCS4B01G103000 chr4A 92.523 107 8 0 4321 4427 508274779 508274673 2.130000e-33 154.0
14 TraesCS4B01G103000 chr4A 89.720 107 11 0 4321 4427 508358547 508358441 2.150000e-28 137.0
15 TraesCS4B01G103000 chr4A 89.720 107 11 0 4321 4427 508494879 508494773 2.150000e-28 137.0
16 TraesCS4B01G103000 chr4A 85.714 112 7 1 3632 3743 511021982 511021880 4.680000e-20 110.0
17 TraesCS4B01G103000 chr7D 91.509 106 8 1 2858 2962 279743673 279743568 1.280000e-30 145.0
18 TraesCS4B01G103000 chr6D 90.196 102 10 0 1207 1308 448708570 448708671 2.780000e-27 134.0
19 TraesCS4B01G103000 chr6D 87.963 108 10 3 3793 3897 470724170 470724277 1.670000e-24 124.0
20 TraesCS4B01G103000 chr6B 90.196 102 10 0 1207 1308 680306994 680307095 2.780000e-27 134.0
21 TraesCS4B01G103000 chr6A 90.196 102 10 0 1207 1308 594748387 594748488 2.780000e-27 134.0
22 TraesCS4B01G103000 chr2B 92.391 92 7 0 3797 3888 710049755 710049846 9.990000e-27 132.0
23 TraesCS4B01G103000 chr7B 90.000 100 10 0 3789 3888 531736540 531736441 3.590000e-26 130.0
24 TraesCS4B01G103000 chr5A 91.489 94 8 0 3793 3886 6596216 6596309 3.590000e-26 130.0
25 TraesCS4B01G103000 chr5B 90.722 97 7 2 3794 3889 623100461 623100556 1.290000e-25 128.0
26 TraesCS4B01G103000 chr5B 79.661 118 19 4 2858 2973 6589501 6589387 3.670000e-11 80.5
27 TraesCS4B01G103000 chr3B 88.571 105 9 2 3794 3897 232569399 232569297 1.670000e-24 124.0
28 TraesCS4B01G103000 chr3A 85.470 117 13 4 3772 3886 556300018 556300132 7.780000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G103000 chr4B 109217837 109222263 4426 False 8176.000000 8176 100.000000 1 4427 1 chr4B.!!$F1 4426
1 TraesCS4B01G103000 chr4D 76833179 76837046 3867 True 1043.400000 2811 91.223600 40 4277 5 chr4D.!!$R1 4237
2 TraesCS4B01G103000 chr4A 511021473 511025209 3736 True 652.857143 2490 91.029571 40 4214 7 chr4A.!!$R4 4174

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 797 0.244450 ACATGCCAAAATCTGTGCGG 59.756 50.0 0.00 0.00 0.00 5.69 F
1336 1396 0.109551 TCAGTTTCGCTCTGCTCTCG 60.110 55.0 0.00 0.00 33.48 4.04 F
1651 1718 0.179192 CAATGCACGACCGGATTGTG 60.179 55.0 9.46 14.71 44.69 3.33 F
1652 1719 0.605319 AATGCACGACCGGATTGTGT 60.605 50.0 9.46 0.00 43.85 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2133 2250 0.312102 GTCAACCAACCAAGCAGAGC 59.688 55.0 0.00 0.0 0.00 4.09 R
2433 2551 0.659417 CAAACAGTCGCTTGCAGCAG 60.659 55.0 0.00 0.0 42.58 4.24 R
3324 3645 0.736325 CCCTCACGATGTCGAACACC 60.736 60.0 9.67 0.0 43.02 4.16 R
3429 3750 0.816018 TTCTGCAAAAGGTTCCGCGA 60.816 50.0 8.23 0.0 0.00 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.801350 CAAACACGTATCATCATGGAAGT 57.199 39.130 0.00 0.00 0.00 3.01
23 24 5.562917 CAAACACGTATCATCATGGAAGTG 58.437 41.667 0.00 5.43 34.85 3.16
24 25 4.471904 ACACGTATCATCATGGAAGTGT 57.528 40.909 6.43 6.43 36.85 3.55
25 26 5.592104 ACACGTATCATCATGGAAGTGTA 57.408 39.130 9.38 0.00 39.43 2.90
26 27 6.161855 ACACGTATCATCATGGAAGTGTAT 57.838 37.500 9.38 0.00 39.43 2.29
27 28 6.582636 ACACGTATCATCATGGAAGTGTATT 58.417 36.000 9.38 0.00 39.43 1.89
28 29 7.047891 ACACGTATCATCATGGAAGTGTATTT 58.952 34.615 9.38 0.00 39.43 1.40
29 30 7.552687 ACACGTATCATCATGGAAGTGTATTTT 59.447 33.333 9.38 0.00 39.43 1.82
30 31 8.397906 CACGTATCATCATGGAAGTGTATTTTT 58.602 33.333 0.00 0.00 0.00 1.94
93 94 6.181908 ACATCAAAAATAGGCATGGCAAATT 58.818 32.000 22.64 16.73 0.00 1.82
108 109 7.306866 GCATGGCAAATTTAACGTTTTCTACAA 60.307 33.333 5.91 0.00 0.00 2.41
111 112 7.221067 TGGCAAATTTAACGTTTTCTACAACAG 59.779 33.333 5.91 0.00 0.00 3.16
121 122 8.944212 ACGTTTTCTACAACAGTTTATATTGC 57.056 30.769 0.00 0.00 0.00 3.56
154 155 5.861251 TGATAATTTTAGTTTGCAAGCACGG 59.139 36.000 16.04 0.00 0.00 4.94
245 246 5.451798 GGCGGACATGATTTACCATGAAAAT 60.452 40.000 10.42 0.00 44.98 1.82
275 276 8.450964 TCGATTTGTCATTCCTAAAAATCTGTC 58.549 33.333 0.00 0.00 35.87 3.51
278 279 5.556915 TGTCATTCCTAAAAATCTGTCCGT 58.443 37.500 0.00 0.00 0.00 4.69
333 347 8.530269 AAAATACTTACTTGTCAGTAGAACCG 57.470 34.615 2.07 0.00 36.81 4.44
341 355 3.592059 TGTCAGTAGAACCGTAATTGCC 58.408 45.455 0.00 0.00 0.00 4.52
373 397 4.158025 TGGGAGACGACTTAAAGAGATCAC 59.842 45.833 0.00 0.00 0.00 3.06
500 557 2.422093 CCCTCCCATCTACTTTGCCTTC 60.422 54.545 0.00 0.00 0.00 3.46
501 558 2.239654 CCTCCCATCTACTTTGCCTTCA 59.760 50.000 0.00 0.00 0.00 3.02
536 594 1.873591 CTCAGCCTTTTTACGTGCACT 59.126 47.619 16.19 4.64 0.00 4.40
550 608 1.927174 GTGCACTCCTACACATTAGCG 59.073 52.381 10.32 0.00 36.77 4.26
571 629 5.371344 CGTATTTACGGACAAGTCATCAC 57.629 43.478 2.29 0.00 45.30 3.06
572 630 5.100259 CGTATTTACGGACAAGTCATCACT 58.900 41.667 2.29 0.00 45.30 3.41
573 631 5.229469 CGTATTTACGGACAAGTCATCACTC 59.771 44.000 2.29 0.00 45.30 3.51
574 632 4.866508 TTTACGGACAAGTCATCACTCT 57.133 40.909 2.29 0.00 29.93 3.24
575 633 4.436242 TTACGGACAAGTCATCACTCTC 57.564 45.455 2.29 0.00 29.93 3.20
576 634 2.239400 ACGGACAAGTCATCACTCTCA 58.761 47.619 2.29 0.00 29.93 3.27
577 635 2.029828 ACGGACAAGTCATCACTCTCAC 60.030 50.000 2.29 0.00 29.93 3.51
578 636 2.230025 CGGACAAGTCATCACTCTCACT 59.770 50.000 2.29 0.00 29.93 3.41
579 637 3.440522 CGGACAAGTCATCACTCTCACTA 59.559 47.826 2.29 0.00 29.93 2.74
580 638 4.438065 CGGACAAGTCATCACTCTCACTAG 60.438 50.000 2.29 0.00 29.93 2.57
581 639 4.420168 GACAAGTCATCACTCTCACTAGC 58.580 47.826 0.00 0.00 29.93 3.42
582 640 3.829026 ACAAGTCATCACTCTCACTAGCA 59.171 43.478 0.00 0.00 29.93 3.49
583 641 4.465660 ACAAGTCATCACTCTCACTAGCAT 59.534 41.667 0.00 0.00 29.93 3.79
584 642 5.654209 ACAAGTCATCACTCTCACTAGCATA 59.346 40.000 0.00 0.00 29.93 3.14
585 643 6.323482 ACAAGTCATCACTCTCACTAGCATAT 59.677 38.462 0.00 0.00 29.93 1.78
586 644 7.503902 ACAAGTCATCACTCTCACTAGCATATA 59.496 37.037 0.00 0.00 29.93 0.86
587 645 8.355913 CAAGTCATCACTCTCACTAGCATATAA 58.644 37.037 0.00 0.00 29.93 0.98
588 646 8.470657 AGTCATCACTCTCACTAGCATATAAA 57.529 34.615 0.00 0.00 0.00 1.40
589 647 8.575589 AGTCATCACTCTCACTAGCATATAAAG 58.424 37.037 0.00 0.00 0.00 1.85
590 648 8.356657 GTCATCACTCTCACTAGCATATAAAGT 58.643 37.037 0.00 0.00 0.00 2.66
591 649 8.918116 TCATCACTCTCACTAGCATATAAAGTT 58.082 33.333 0.00 0.00 0.00 2.66
592 650 9.539825 CATCACTCTCACTAGCATATAAAGTTT 57.460 33.333 0.00 0.00 0.00 2.66
594 652 9.944376 TCACTCTCACTAGCATATAAAGTTTTT 57.056 29.630 0.00 0.00 0.00 1.94
621 679 8.891671 TTTTTAGATAACTCACCACGTTTAGT 57.108 30.769 0.00 0.00 0.00 2.24
622 680 9.979578 TTTTTAGATAACTCACCACGTTTAGTA 57.020 29.630 0.00 0.00 0.00 1.82
623 681 8.970691 TTTAGATAACTCACCACGTTTAGTAC 57.029 34.615 0.00 0.00 0.00 2.73
624 682 6.830873 AGATAACTCACCACGTTTAGTACT 57.169 37.500 0.00 0.00 0.00 2.73
625 683 7.928307 AGATAACTCACCACGTTTAGTACTA 57.072 36.000 0.00 0.00 0.00 1.82
626 684 8.517062 AGATAACTCACCACGTTTAGTACTAT 57.483 34.615 2.79 0.00 0.00 2.12
627 685 9.618890 AGATAACTCACCACGTTTAGTACTATA 57.381 33.333 2.79 0.00 0.00 1.31
628 686 9.657121 GATAACTCACCACGTTTAGTACTATAC 57.343 37.037 12.09 12.09 0.00 1.47
629 687 7.452880 AACTCACCACGTTTAGTACTATACA 57.547 36.000 19.41 0.00 0.00 2.29
630 688 7.636150 ACTCACCACGTTTAGTACTATACAT 57.364 36.000 19.41 5.45 0.00 2.29
631 689 8.737168 ACTCACCACGTTTAGTACTATACATA 57.263 34.615 19.41 0.00 0.00 2.29
632 690 9.347240 ACTCACCACGTTTAGTACTATACATAT 57.653 33.333 19.41 5.54 0.00 1.78
656 714 7.681939 TTAACTGGATGATACTTGTTCAACC 57.318 36.000 0.00 0.00 36.77 3.77
657 715 5.505181 ACTGGATGATACTTGTTCAACCT 57.495 39.130 2.36 0.00 37.06 3.50
658 716 6.620877 ACTGGATGATACTTGTTCAACCTA 57.379 37.500 2.36 0.00 37.06 3.08
659 717 7.200434 ACTGGATGATACTTGTTCAACCTAT 57.800 36.000 2.36 0.00 37.06 2.57
660 718 8.319057 ACTGGATGATACTTGTTCAACCTATA 57.681 34.615 2.36 0.00 37.06 1.31
661 719 8.938883 ACTGGATGATACTTGTTCAACCTATAT 58.061 33.333 2.36 0.00 37.06 0.86
662 720 9.784531 CTGGATGATACTTGTTCAACCTATATT 57.215 33.333 2.36 0.00 37.06 1.28
663 721 9.778741 TGGATGATACTTGTTCAACCTATATTC 57.221 33.333 2.36 0.00 37.06 1.75
664 722 9.220767 GGATGATACTTGTTCAACCTATATTCC 57.779 37.037 0.00 0.00 34.26 3.01
667 725 8.429641 TGATACTTGTTCAACCTATATTCCTCC 58.570 37.037 0.00 0.00 0.00 4.30
668 726 5.671493 ACTTGTTCAACCTATATTCCTCCG 58.329 41.667 0.00 0.00 0.00 4.63
669 727 5.424252 ACTTGTTCAACCTATATTCCTCCGA 59.576 40.000 0.00 0.00 0.00 4.55
670 728 5.943349 TGTTCAACCTATATTCCTCCGAA 57.057 39.130 0.00 0.00 0.00 4.30
671 729 6.302535 TGTTCAACCTATATTCCTCCGAAA 57.697 37.500 0.00 0.00 0.00 3.46
672 730 6.895782 TGTTCAACCTATATTCCTCCGAAAT 58.104 36.000 0.00 0.00 0.00 2.17
673 731 6.765989 TGTTCAACCTATATTCCTCCGAAATG 59.234 38.462 0.00 0.00 0.00 2.32
674 732 6.740944 TCAACCTATATTCCTCCGAAATGA 57.259 37.500 0.00 0.00 0.00 2.57
675 733 7.131907 TCAACCTATATTCCTCCGAAATGAA 57.868 36.000 0.00 0.00 0.00 2.57
676 734 7.570132 TCAACCTATATTCCTCCGAAATGAAA 58.430 34.615 0.00 0.00 0.00 2.69
677 735 8.050325 TCAACCTATATTCCTCCGAAATGAAAA 58.950 33.333 0.00 0.00 0.00 2.29
678 736 8.850156 CAACCTATATTCCTCCGAAATGAAAAT 58.150 33.333 0.00 0.00 0.00 1.82
679 737 8.396272 ACCTATATTCCTCCGAAATGAAAATG 57.604 34.615 0.00 0.00 0.00 2.32
680 738 7.998964 ACCTATATTCCTCCGAAATGAAAATGT 59.001 33.333 0.00 0.00 0.00 2.71
681 739 9.502091 CCTATATTCCTCCGAAATGAAAATGTA 57.498 33.333 0.00 0.00 0.00 2.29
684 742 7.880160 ATTCCTCCGAAATGAAAATGTATCA 57.120 32.000 0.00 0.00 0.00 2.15
685 743 7.880160 TTCCTCCGAAATGAAAATGTATCAT 57.120 32.000 0.00 0.00 39.15 2.45
686 744 7.496529 TCCTCCGAAATGAAAATGTATCATC 57.503 36.000 0.00 0.00 36.53 2.92
687 745 7.282585 TCCTCCGAAATGAAAATGTATCATCT 58.717 34.615 0.00 0.00 36.53 2.90
688 746 7.227314 TCCTCCGAAATGAAAATGTATCATCTG 59.773 37.037 0.00 0.00 36.53 2.90
689 747 7.227314 CCTCCGAAATGAAAATGTATCATCTGA 59.773 37.037 0.00 0.00 36.53 3.27
690 748 8.681486 TCCGAAATGAAAATGTATCATCTGAT 57.319 30.769 0.00 0.00 36.53 2.90
691 749 9.123902 TCCGAAATGAAAATGTATCATCTGATT 57.876 29.630 0.00 0.00 36.53 2.57
692 750 9.740239 CCGAAATGAAAATGTATCATCTGATTT 57.260 29.630 0.00 0.00 36.53 2.17
722 780 9.403583 ACTACTTATTTTCCTTCTTGAAACACA 57.596 29.630 0.00 0.00 34.13 3.72
725 783 7.653311 ACTTATTTTCCTTCTTGAAACACATGC 59.347 33.333 0.00 0.00 34.13 4.06
726 784 4.320608 TTTCCTTCTTGAAACACATGCC 57.679 40.909 0.00 0.00 29.56 4.40
727 785 2.942804 TCCTTCTTGAAACACATGCCA 58.057 42.857 0.00 0.00 0.00 4.92
728 786 3.295093 TCCTTCTTGAAACACATGCCAA 58.705 40.909 0.00 0.00 0.00 4.52
729 787 3.703556 TCCTTCTTGAAACACATGCCAAA 59.296 39.130 0.00 0.00 0.00 3.28
730 788 4.161189 TCCTTCTTGAAACACATGCCAAAA 59.839 37.500 0.00 0.00 0.00 2.44
731 789 5.058490 CCTTCTTGAAACACATGCCAAAAT 58.942 37.500 0.00 0.00 0.00 1.82
732 790 5.178067 CCTTCTTGAAACACATGCCAAAATC 59.822 40.000 0.00 0.00 0.00 2.17
733 791 5.534207 TCTTGAAACACATGCCAAAATCT 57.466 34.783 0.00 0.00 0.00 2.40
734 792 5.291178 TCTTGAAACACATGCCAAAATCTG 58.709 37.500 0.00 0.00 0.00 2.90
735 793 4.669206 TGAAACACATGCCAAAATCTGT 57.331 36.364 0.00 0.00 0.00 3.41
736 794 4.370049 TGAAACACATGCCAAAATCTGTG 58.630 39.130 0.00 0.00 43.54 3.66
737 795 2.443887 ACACATGCCAAAATCTGTGC 57.556 45.000 0.00 0.00 42.07 4.57
738 796 1.336148 ACACATGCCAAAATCTGTGCG 60.336 47.619 0.00 0.00 42.07 5.34
739 797 0.244450 ACATGCCAAAATCTGTGCGG 59.756 50.000 0.00 0.00 0.00 5.69
740 798 0.458889 CATGCCAAAATCTGTGCGGG 60.459 55.000 0.00 0.00 0.00 6.13
741 799 2.125952 GCCAAAATCTGTGCGGGC 60.126 61.111 0.00 0.00 0.00 6.13
742 800 2.179018 CCAAAATCTGTGCGGGCG 59.821 61.111 0.00 0.00 0.00 6.13
743 801 2.625823 CCAAAATCTGTGCGGGCGT 61.626 57.895 0.00 0.00 0.00 5.68
744 802 1.302383 CCAAAATCTGTGCGGGCGTA 61.302 55.000 0.00 0.00 0.00 4.42
745 803 0.732571 CAAAATCTGTGCGGGCGTAT 59.267 50.000 0.00 0.00 0.00 3.06
746 804 1.937223 CAAAATCTGTGCGGGCGTATA 59.063 47.619 0.00 0.00 0.00 1.47
747 805 2.543777 AAATCTGTGCGGGCGTATAT 57.456 45.000 0.00 0.00 0.00 0.86
748 806 1.795768 AATCTGTGCGGGCGTATATG 58.204 50.000 0.00 0.00 0.00 1.78
749 807 0.670546 ATCTGTGCGGGCGTATATGC 60.671 55.000 8.51 8.51 0.00 3.14
750 808 1.594021 CTGTGCGGGCGTATATGCA 60.594 57.895 18.41 0.00 36.28 3.96
751 809 0.950555 CTGTGCGGGCGTATATGCAT 60.951 55.000 18.41 3.79 39.85 3.96
752 810 1.227342 TGTGCGGGCGTATATGCATG 61.227 55.000 18.41 10.68 39.85 4.06
753 811 1.070615 TGCGGGCGTATATGCATGT 59.929 52.632 18.41 5.06 36.28 3.21
754 812 1.227342 TGCGGGCGTATATGCATGTG 61.227 55.000 18.41 6.02 36.28 3.21
755 813 1.911293 GCGGGCGTATATGCATGTGG 61.911 60.000 18.41 0.53 36.28 4.17
756 814 0.602638 CGGGCGTATATGCATGTGGT 60.603 55.000 18.41 0.00 36.28 4.16
757 815 0.874390 GGGCGTATATGCATGTGGTG 59.126 55.000 18.41 0.00 36.28 4.17
758 816 1.593196 GGCGTATATGCATGTGGTGT 58.407 50.000 18.41 0.00 36.28 4.16
759 817 1.946768 GGCGTATATGCATGTGGTGTT 59.053 47.619 18.41 0.00 36.28 3.32
760 818 2.357637 GGCGTATATGCATGTGGTGTTT 59.642 45.455 18.41 0.00 36.28 2.83
761 819 3.548014 GGCGTATATGCATGTGGTGTTTC 60.548 47.826 18.41 0.00 36.28 2.78
762 820 3.312421 GCGTATATGCATGTGGTGTTTCT 59.688 43.478 10.16 0.00 34.15 2.52
763 821 4.786292 GCGTATATGCATGTGGTGTTTCTG 60.786 45.833 10.16 0.00 34.15 3.02
764 822 4.332543 CGTATATGCATGTGGTGTTTCTGT 59.667 41.667 10.16 0.00 0.00 3.41
765 823 5.163764 CGTATATGCATGTGGTGTTTCTGTT 60.164 40.000 10.16 0.00 0.00 3.16
766 824 6.036626 CGTATATGCATGTGGTGTTTCTGTTA 59.963 38.462 10.16 0.00 0.00 2.41
767 825 6.832520 ATATGCATGTGGTGTTTCTGTTAA 57.167 33.333 10.16 0.00 0.00 2.01
768 826 5.726980 ATGCATGTGGTGTTTCTGTTAAT 57.273 34.783 0.00 0.00 0.00 1.40
769 827 5.528043 TGCATGTGGTGTTTCTGTTAATT 57.472 34.783 0.00 0.00 0.00 1.40
770 828 5.911752 TGCATGTGGTGTTTCTGTTAATTT 58.088 33.333 0.00 0.00 0.00 1.82
771 829 5.982516 TGCATGTGGTGTTTCTGTTAATTTC 59.017 36.000 0.00 0.00 0.00 2.17
772 830 5.405269 GCATGTGGTGTTTCTGTTAATTTCC 59.595 40.000 0.00 0.00 0.00 3.13
773 831 6.511416 CATGTGGTGTTTCTGTTAATTTCCA 58.489 36.000 0.00 0.00 0.00 3.53
774 832 6.723298 TGTGGTGTTTCTGTTAATTTCCAT 57.277 33.333 0.00 0.00 0.00 3.41
775 833 6.511416 TGTGGTGTTTCTGTTAATTTCCATG 58.489 36.000 0.00 0.00 0.00 3.66
776 834 6.322456 TGTGGTGTTTCTGTTAATTTCCATGA 59.678 34.615 0.00 0.00 0.00 3.07
777 835 7.015098 TGTGGTGTTTCTGTTAATTTCCATGAT 59.985 33.333 0.00 0.00 0.00 2.45
778 836 7.329226 GTGGTGTTTCTGTTAATTTCCATGATG 59.671 37.037 0.00 0.00 0.00 3.07
779 837 7.232330 TGGTGTTTCTGTTAATTTCCATGATGA 59.768 33.333 0.00 0.00 0.00 2.92
780 838 8.087750 GGTGTTTCTGTTAATTTCCATGATGAA 58.912 33.333 0.00 0.00 0.00 2.57
781 839 9.643693 GTGTTTCTGTTAATTTCCATGATGAAT 57.356 29.630 0.00 0.00 0.00 2.57
823 882 4.211374 CAGCTCCCGAAAAGGAATATTACG 59.789 45.833 0.00 0.00 45.00 3.18
836 895 4.863131 GGAATATTACGCGGTAGATTCCTG 59.137 45.833 27.57 0.00 38.23 3.86
873 932 2.203209 GCTTACATCAGGGGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
878 937 4.864334 CATCAGGGGGCGGAGTGC 62.864 72.222 0.00 0.00 45.38 4.40
891 950 1.468520 CGGAGTGCAATAAACCCACAG 59.531 52.381 0.00 0.00 32.09 3.66
892 951 1.202348 GGAGTGCAATAAACCCACAGC 59.798 52.381 0.00 0.00 32.09 4.40
986 1046 2.785713 GAGACGAGCTCATAGAACCC 57.214 55.000 15.40 0.00 43.38 4.11
996 1056 0.541863 CATAGAACCCAAGGAGCGGT 59.458 55.000 0.00 0.00 0.00 5.68
1083 1143 1.295423 GCTACACAAGCCCCTTCGA 59.705 57.895 0.00 0.00 46.25 3.71
1152 1212 3.075005 GAGGCCACTGGGAGCGTA 61.075 66.667 5.01 0.00 35.59 4.42
1167 1227 2.728817 GTATCCCTCTCCCGCACG 59.271 66.667 0.00 0.00 0.00 5.34
1312 1372 1.033746 CGACGCCTACCAGGTCCTAA 61.034 60.000 0.00 0.00 37.80 2.69
1313 1373 1.411041 GACGCCTACCAGGTCCTAAT 58.589 55.000 0.00 0.00 37.80 1.73
1314 1374 1.340568 GACGCCTACCAGGTCCTAATC 59.659 57.143 0.00 0.00 37.80 1.75
1315 1375 0.680061 CGCCTACCAGGTCCTAATCC 59.320 60.000 0.00 0.00 37.80 3.01
1316 1376 1.758123 CGCCTACCAGGTCCTAATCCT 60.758 57.143 0.00 0.00 37.80 3.24
1317 1377 2.409570 GCCTACCAGGTCCTAATCCTT 58.590 52.381 0.00 0.00 37.80 3.36
1318 1378 2.369203 GCCTACCAGGTCCTAATCCTTC 59.631 54.545 0.00 0.00 37.80 3.46
1319 1379 3.654273 CCTACCAGGTCCTAATCCTTCA 58.346 50.000 0.00 0.00 32.37 3.02
1320 1380 3.643792 CCTACCAGGTCCTAATCCTTCAG 59.356 52.174 0.00 0.00 32.37 3.02
1321 1381 3.207044 ACCAGGTCCTAATCCTTCAGT 57.793 47.619 0.00 0.00 32.37 3.41
1323 1383 3.916989 ACCAGGTCCTAATCCTTCAGTTT 59.083 43.478 0.00 0.00 32.37 2.66
1324 1384 4.019231 ACCAGGTCCTAATCCTTCAGTTTC 60.019 45.833 0.00 0.00 32.37 2.78
1325 1385 4.184629 CAGGTCCTAATCCTTCAGTTTCG 58.815 47.826 0.00 0.00 32.37 3.46
1336 1396 0.109551 TCAGTTTCGCTCTGCTCTCG 60.110 55.000 0.00 0.00 33.48 4.04
1337 1397 1.445238 AGTTTCGCTCTGCTCTCGC 60.445 57.895 0.00 0.00 0.00 5.03
1359 1419 2.143925 AGTTACAGCTTCAGTTTCGCC 58.856 47.619 0.00 0.00 0.00 5.54
1606 1670 2.333926 CCAAGTACGAACTCGATTGCA 58.666 47.619 6.05 0.00 43.02 4.08
1607 1671 2.930040 CCAAGTACGAACTCGATTGCAT 59.070 45.455 6.05 0.00 43.02 3.96
1611 1678 1.353103 CGAACTCGATTGCATGGCC 59.647 57.895 0.00 0.00 43.02 5.36
1623 1690 2.114670 CATGGCCTGCCGTCGATTT 61.115 57.895 3.32 0.00 39.42 2.17
1642 1709 1.130613 GACAGCGACAATGCACGAC 59.869 57.895 0.00 0.00 37.31 4.34
1647 1714 1.809619 CGACAATGCACGACCGGAT 60.810 57.895 9.46 0.00 0.00 4.18
1651 1718 0.179192 CAATGCACGACCGGATTGTG 60.179 55.000 9.46 14.71 44.69 3.33
1652 1719 0.605319 AATGCACGACCGGATTGTGT 60.605 50.000 9.46 0.00 43.85 3.72
1653 1720 1.298157 ATGCACGACCGGATTGTGTG 61.298 55.000 9.46 10.10 43.85 3.82
1674 1766 6.804295 GTGTGTGTTGTTGTTCTGATTTGTTA 59.196 34.615 0.00 0.00 0.00 2.41
1852 1969 0.744414 CTGCCACCCGACATGGTAAG 60.744 60.000 0.00 0.00 39.63 2.34
1885 2002 3.576550 GGTGCAAACTGGGGATTTTCTTA 59.423 43.478 0.00 0.00 0.00 2.10
1905 2022 5.365025 TCTTAACTGATCAGGATTCAGGAGG 59.635 44.000 26.08 5.71 35.93 4.30
1920 2037 2.092538 CAGGAGGAGCATCTGAAACCAT 60.093 50.000 0.00 0.00 33.73 3.55
1950 2067 3.851128 TTCCACCACGGCGTGACA 61.851 61.111 38.91 17.54 35.23 3.58
1965 2082 1.741770 GACAAGGTGCTACTGCCCG 60.742 63.158 0.00 0.00 38.71 6.13
2043 2160 2.441348 TACGGGCTGCCGATCAGA 60.441 61.111 13.40 0.00 45.72 3.27
2133 2250 1.741732 CGGGTCCAATCAGCTCTTGAG 60.742 57.143 7.05 0.00 39.68 3.02
2193 2311 1.422977 TTGGCCTGCACCCTGAACTA 61.423 55.000 3.32 0.00 0.00 2.24
2205 2323 1.673033 CCTGAACTACCCGCTGTTCTG 60.673 57.143 0.00 0.00 41.99 3.02
2355 2473 2.743718 CGGTCCACCTTGCAGTCT 59.256 61.111 0.00 0.00 0.00 3.24
2359 2477 0.681733 GTCCACCTTGCAGTCTCTGA 59.318 55.000 0.66 0.00 32.44 3.27
2419 2537 4.610007 CGAATCTAAGATGCGCATTTCAGG 60.610 45.833 26.12 13.69 0.00 3.86
2430 2548 1.396653 CATTTCAGGTGGATGCCTCC 58.603 55.000 0.22 0.22 42.45 4.30
2433 2551 1.274703 TTCAGGTGGATGCCTCCCTC 61.275 60.000 5.49 0.00 41.29 4.30
2558 2676 4.797604 GCGACTGCATCATCACTAAGGTAT 60.798 45.833 0.00 0.00 42.15 2.73
2559 2677 5.564848 GCGACTGCATCATCACTAAGGTATA 60.565 44.000 0.00 0.00 42.15 1.47
2561 2679 6.529477 CGACTGCATCATCACTAAGGTATATG 59.471 42.308 0.00 0.00 0.00 1.78
2597 2890 6.013379 TGACTCTTCATTACTGGAACTGGAAT 60.013 38.462 0.00 0.00 41.66 3.01
2598 2891 6.410540 ACTCTTCATTACTGGAACTGGAATC 58.589 40.000 0.00 0.00 38.83 2.52
2621 2914 4.196971 TGATCTGACTGATGCATTTCTGG 58.803 43.478 0.00 0.00 35.14 3.86
2692 2985 5.875359 AGGACTTCCAATTATTCTCAACGAC 59.125 40.000 0.00 0.00 38.89 4.34
2724 3017 1.339438 ACAGGTCTATGCTTGTGCCAG 60.339 52.381 0.00 0.00 38.71 4.85
2732 3025 2.920724 TGCTTGTGCCAGTACAGTAA 57.079 45.000 0.00 0.00 38.71 2.24
2737 3030 5.068460 TGCTTGTGCCAGTACAGTAATTTTT 59.932 36.000 0.00 0.00 38.71 1.94
2738 3031 5.402270 GCTTGTGCCAGTACAGTAATTTTTG 59.598 40.000 0.00 0.00 0.00 2.44
2740 3033 6.701145 TGTGCCAGTACAGTAATTTTTGAA 57.299 33.333 0.00 0.00 0.00 2.69
2741 3034 7.283625 TGTGCCAGTACAGTAATTTTTGAAT 57.716 32.000 0.00 0.00 0.00 2.57
2835 3150 6.597832 TTTTCTTCCCTTTTGAGTGTTGAA 57.402 33.333 0.00 0.00 0.00 2.69
2864 3179 1.541147 CATTATTGGGTAGGCCATGCG 59.459 52.381 5.01 0.00 36.17 4.73
2876 3191 0.732538 GCCATGCGTGCCAACTAAAC 60.733 55.000 0.00 0.00 0.00 2.01
2885 3200 1.892474 TGCCAACTAAACTTGCCATCC 59.108 47.619 0.00 0.00 0.00 3.51
2886 3201 2.171003 GCCAACTAAACTTGCCATCCT 58.829 47.619 0.00 0.00 0.00 3.24
2892 3207 4.666512 ACTAAACTTGCCATCCTCACATT 58.333 39.130 0.00 0.00 0.00 2.71
2900 3215 6.375455 ACTTGCCATCCTCACATTAACTAAAG 59.625 38.462 0.00 0.00 0.00 1.85
2903 3218 6.150976 TGCCATCCTCACATTAACTAAAGTTG 59.849 38.462 5.62 0.00 38.90 3.16
2944 3260 2.674747 GCCATGTGCAAAATCCGAACAT 60.675 45.455 0.00 0.00 40.77 2.71
2962 3278 7.396055 TCCGAACATTTGGGATTTATCTTTTCT 59.604 33.333 0.00 0.00 32.17 2.52
3003 3319 8.983702 ATCTATAAATTTTGCGGGGTAACTAA 57.016 30.769 0.00 0.00 0.00 2.24
3071 3387 0.901124 GGCCATCTGAGAGTGACTGT 59.099 55.000 0.00 0.00 0.00 3.55
3097 3413 3.346315 TGCCATTGTCATTCACTAGTGG 58.654 45.455 22.48 7.14 0.00 4.00
3116 3437 3.170717 TGGTTACTTCCACCGAGATCTT 58.829 45.455 0.00 0.00 37.07 2.40
3122 3443 5.269505 ACTTCCACCGAGATCTTATCAAG 57.730 43.478 0.00 0.00 0.00 3.02
3145 3466 9.469807 CAAGTATGTCTCTAGCTAACATTTAGG 57.530 37.037 13.36 1.34 35.38 2.69
3147 3468 4.933330 TGTCTCTAGCTAACATTTAGGCG 58.067 43.478 0.00 0.00 0.00 5.52
3149 3470 5.591472 TGTCTCTAGCTAACATTTAGGCGTA 59.409 40.000 0.00 0.00 0.00 4.42
3231 3552 1.001641 CTGCAAGGACCCAAGGGAG 60.002 63.158 13.15 0.00 38.96 4.30
3252 3573 3.423154 GCGAGACAAGTTGCCCGG 61.423 66.667 1.81 0.00 0.00 5.73
3366 3687 2.979676 CACAAGCTCCAGCCGCAA 60.980 61.111 0.00 0.00 43.38 4.85
3372 3693 4.711949 CTCCAGCCGCAACCTGCT 62.712 66.667 0.00 0.00 42.25 4.24
3407 3728 1.552486 CCCCTACTCCTTGACCTCACA 60.552 57.143 0.00 0.00 0.00 3.58
3417 3738 6.157645 ACTCCTTGACCTCACAATTCTCATAT 59.842 38.462 0.00 0.00 0.00 1.78
3440 3761 2.981859 ATATGAACTCGCGGAACCTT 57.018 45.000 6.13 0.00 0.00 3.50
3516 3837 1.601759 GGCTGCCTGCTGAAGAACA 60.602 57.895 12.43 0.00 42.39 3.18
3567 3888 4.307032 ACATCTATGTTGGTGCTCCTTT 57.693 40.909 6.34 0.00 37.90 3.11
3568 3889 4.666512 ACATCTATGTTGGTGCTCCTTTT 58.333 39.130 6.34 0.00 37.90 2.27
3569 3890 4.702131 ACATCTATGTTGGTGCTCCTTTTC 59.298 41.667 6.34 0.00 37.90 2.29
3570 3891 4.640771 TCTATGTTGGTGCTCCTTTTCT 57.359 40.909 6.34 0.00 34.23 2.52
3571 3892 5.755409 TCTATGTTGGTGCTCCTTTTCTA 57.245 39.130 6.34 0.00 34.23 2.10
3572 3893 6.121776 TCTATGTTGGTGCTCCTTTTCTAA 57.878 37.500 6.34 0.00 34.23 2.10
3573 3894 6.539173 TCTATGTTGGTGCTCCTTTTCTAAA 58.461 36.000 6.34 0.00 34.23 1.85
3574 3895 7.001674 TCTATGTTGGTGCTCCTTTTCTAAAA 58.998 34.615 6.34 0.00 34.23 1.52
3575 3896 5.923733 TGTTGGTGCTCCTTTTCTAAAAA 57.076 34.783 6.34 0.00 34.23 1.94
3603 3924 9.646522 AAATTAATAATCTATGTTGGTGCTCCT 57.353 29.630 6.34 0.00 34.23 3.69
3604 3925 9.646522 AATTAATAATCTATGTTGGTGCTCCTT 57.353 29.630 6.34 0.00 34.23 3.36
3605 3926 9.646522 ATTAATAATCTATGTTGGTGCTCCTTT 57.353 29.630 6.34 0.00 34.23 3.11
3606 3927 7.961326 AATAATCTATGTTGGTGCTCCTTTT 57.039 32.000 6.34 0.00 34.23 2.27
3607 3928 5.904362 AATCTATGTTGGTGCTCCTTTTC 57.096 39.130 6.34 0.00 34.23 2.29
3608 3929 4.640771 TCTATGTTGGTGCTCCTTTTCT 57.359 40.909 6.34 0.00 34.23 2.52
3609 3930 5.755409 TCTATGTTGGTGCTCCTTTTCTA 57.245 39.130 6.34 0.00 34.23 2.10
3610 3931 6.121776 TCTATGTTGGTGCTCCTTTTCTAA 57.878 37.500 6.34 0.00 34.23 2.10
3611 3932 6.539173 TCTATGTTGGTGCTCCTTTTCTAAA 58.461 36.000 6.34 0.00 34.23 1.85
3612 3933 7.001674 TCTATGTTGGTGCTCCTTTTCTAAAA 58.998 34.615 6.34 0.00 34.23 1.52
3613 3934 5.923733 TGTTGGTGCTCCTTTTCTAAAAA 57.076 34.783 6.34 0.00 34.23 1.94
3614 3935 5.656480 TGTTGGTGCTCCTTTTCTAAAAAC 58.344 37.500 6.34 0.00 34.23 2.43
3615 3936 5.186021 TGTTGGTGCTCCTTTTCTAAAAACA 59.814 36.000 6.34 2.28 34.23 2.83
3616 3937 5.923733 TGGTGCTCCTTTTCTAAAAACAA 57.076 34.783 6.34 0.00 34.23 2.83
3617 3938 6.287589 TGGTGCTCCTTTTCTAAAAACAAA 57.712 33.333 6.34 0.00 34.23 2.83
3618 3939 6.702329 TGGTGCTCCTTTTCTAAAAACAAAA 58.298 32.000 6.34 0.00 34.23 2.44
3619 3940 7.162082 TGGTGCTCCTTTTCTAAAAACAAAAA 58.838 30.769 6.34 0.00 34.23 1.94
3620 3941 7.826744 TGGTGCTCCTTTTCTAAAAACAAAAAT 59.173 29.630 6.34 0.00 34.23 1.82
3621 3942 8.673711 GGTGCTCCTTTTCTAAAAACAAAAATT 58.326 29.630 0.00 0.00 0.00 1.82
3697 4018 8.695456 GGACTATTGGTAATTGGAATGTGAAAT 58.305 33.333 0.00 0.00 0.00 2.17
3743 4064 8.627208 ATTGCTTGATAAACATATACTCCCTG 57.373 34.615 0.00 0.00 0.00 4.45
3744 4065 6.533730 TGCTTGATAAACATATACTCCCTGG 58.466 40.000 0.00 0.00 0.00 4.45
3746 4067 6.239887 GCTTGATAAACATATACTCCCTGGGA 60.240 42.308 16.13 16.13 0.00 4.37
3748 4069 6.147473 TGATAAACATATACTCCCTGGGACA 58.853 40.000 12.53 2.68 0.00 4.02
3761 4082 2.822707 TGGGACAGAGGGAGTAGTAC 57.177 55.000 0.00 0.00 0.00 2.73
3762 4083 2.285707 TGGGACAGAGGGAGTAGTACT 58.714 52.381 1.37 1.37 0.00 2.73
3763 4084 2.653366 TGGGACAGAGGGAGTAGTACTT 59.347 50.000 0.00 0.00 0.00 2.24
3764 4085 3.077088 TGGGACAGAGGGAGTAGTACTTT 59.923 47.826 0.00 0.00 0.00 2.66
3765 4086 4.095211 GGGACAGAGGGAGTAGTACTTTT 58.905 47.826 0.00 0.00 0.00 2.27
3766 4087 4.531339 GGGACAGAGGGAGTAGTACTTTTT 59.469 45.833 0.00 0.00 0.00 1.94
3789 4110 6.886178 TTTTAATAAGGCAGAGGGAGTAGT 57.114 37.500 0.00 0.00 0.00 2.73
3790 4111 7.983166 TTTTAATAAGGCAGAGGGAGTAGTA 57.017 36.000 0.00 0.00 0.00 1.82
3791 4112 6.973460 TTAATAAGGCAGAGGGAGTAGTAC 57.027 41.667 0.00 0.00 0.00 2.73
3792 4113 4.817874 ATAAGGCAGAGGGAGTAGTACT 57.182 45.455 1.37 1.37 0.00 2.73
3793 4114 3.476485 AAGGCAGAGGGAGTAGTACTT 57.524 47.619 0.00 0.00 0.00 2.24
3794 4115 4.604784 AAGGCAGAGGGAGTAGTACTTA 57.395 45.455 0.00 0.00 0.00 2.24
3795 4116 4.173290 AGGCAGAGGGAGTAGTACTTAG 57.827 50.000 0.00 0.00 0.00 2.18
3796 4117 3.528491 AGGCAGAGGGAGTAGTACTTAGT 59.472 47.826 0.00 0.00 0.00 2.24
3797 4118 4.725810 AGGCAGAGGGAGTAGTACTTAGTA 59.274 45.833 0.00 0.00 0.00 1.82
3798 4119 4.821260 GGCAGAGGGAGTAGTACTTAGTAC 59.179 50.000 14.13 14.13 39.10 2.73
3800 4121 5.759763 GCAGAGGGAGTAGTACTTAGTACTC 59.240 48.000 25.96 16.75 44.86 2.59
3807 4128 7.784633 GAGTAGTACTTAGTACTCCATTCGT 57.215 40.000 25.96 5.26 44.86 3.85
3808 4129 8.207521 GAGTAGTACTTAGTACTCCATTCGTT 57.792 38.462 25.96 4.59 44.86 3.85
3809 4130 8.207521 AGTAGTACTTAGTACTCCATTCGTTC 57.792 38.462 25.96 8.62 44.86 3.95
3823 4144 3.768468 TTCGTTCCGAAATAAATGGCC 57.232 42.857 0.00 0.00 43.00 5.36
3824 4145 2.018515 TCGTTCCGAAATAAATGGCCC 58.981 47.619 0.00 0.00 31.06 5.80
3828 4149 2.808919 TCCGAAATAAATGGCCCAACA 58.191 42.857 0.00 0.00 0.00 3.33
3838 4159 7.726033 ATAAATGGCCCAACATTGTACTAAA 57.274 32.000 0.00 0.00 40.71 1.85
3839 4160 6.426646 AAATGGCCCAACATTGTACTAAAA 57.573 33.333 0.00 0.00 40.71 1.52
3875 4207 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3889 4221 1.472188 ACGGAGGGAGTAGTTGTAGC 58.528 55.000 0.00 0.00 0.00 3.58
3906 4238 2.119671 AGCGCAGTTGCTTGTAAAAC 57.880 45.000 11.47 0.00 44.46 2.43
3919 4251 5.809562 TGCTTGTAAAACACCAGTTGATTTG 59.190 36.000 0.00 0.00 38.17 2.32
4033 4366 5.995897 GCCCGAGTTTGATACCAATATTACT 59.004 40.000 0.00 0.00 31.46 2.24
4034 4367 7.156673 GCCCGAGTTTGATACCAATATTACTA 58.843 38.462 0.00 0.00 31.46 1.82
4035 4368 7.117379 GCCCGAGTTTGATACCAATATTACTAC 59.883 40.741 0.00 0.00 31.46 2.73
4047 4380 8.680820 ACCAATATTACTACATACTATGGGCT 57.319 34.615 1.11 0.00 26.85 5.19
4048 4381 9.778479 ACCAATATTACTACATACTATGGGCTA 57.222 33.333 1.11 0.00 26.85 3.93
4054 4387 3.721087 ACATACTATGGGCTATTGGGC 57.279 47.619 1.11 0.00 40.05 5.36
4066 4400 2.760374 CTATTGGGCTGGATTCTCGAC 58.240 52.381 0.00 0.00 0.00 4.20
4074 4408 2.479730 GCTGGATTCTCGACATACACGT 60.480 50.000 0.00 0.00 0.00 4.49
4078 4412 6.622833 TGGATTCTCGACATACACGTATTA 57.377 37.500 0.00 0.00 0.00 0.98
4085 4419 7.381323 TCTCGACATACACGTATTAGAGGATA 58.619 38.462 0.00 0.00 0.00 2.59
4131 4465 3.801594 CCAACAACAAACACCAGCATAAC 59.198 43.478 0.00 0.00 0.00 1.89
4163 4497 7.243604 TGGAATCAAGCTTAAATCAACCAAT 57.756 32.000 0.00 0.00 0.00 3.16
4179 4513 7.831691 TCAACCAATCTCTCAATTAAAACCA 57.168 32.000 0.00 0.00 0.00 3.67
4190 4524 8.519799 TCTCAATTAAAACCATATTCCACTCC 57.480 34.615 0.00 0.00 0.00 3.85
4203 4537 2.923035 ACTCCAGTGGTCCGTGGG 60.923 66.667 9.54 4.32 34.27 4.61
4223 4557 4.724293 TGGGGTATCATAATCACACAAGGA 59.276 41.667 0.00 0.00 0.00 3.36
4236 4570 3.190118 CACACAAGGAGAAAGCAAGATCC 59.810 47.826 0.00 0.00 0.00 3.36
4237 4571 3.073650 ACACAAGGAGAAAGCAAGATCCT 59.926 43.478 0.00 0.00 44.12 3.24
4238 4572 4.287067 ACACAAGGAGAAAGCAAGATCCTA 59.713 41.667 1.53 0.00 41.36 2.94
4245 4579 5.491982 GAGAAAGCAAGATCCTAAAGGTGA 58.508 41.667 0.00 0.00 36.34 4.02
4281 4615 5.261040 TCAAGAAGATGAATTTGTCCCCT 57.739 39.130 0.00 0.00 0.00 4.79
4282 4616 5.256474 TCAAGAAGATGAATTTGTCCCCTC 58.744 41.667 0.00 0.00 0.00 4.30
4283 4617 4.934797 AGAAGATGAATTTGTCCCCTCA 57.065 40.909 0.00 0.00 0.00 3.86
4284 4618 5.261040 AGAAGATGAATTTGTCCCCTCAA 57.739 39.130 0.00 0.00 0.00 3.02
4285 4619 5.644188 AGAAGATGAATTTGTCCCCTCAAA 58.356 37.500 0.00 0.00 40.74 2.69
4286 4620 6.077322 AGAAGATGAATTTGTCCCCTCAAAA 58.923 36.000 0.00 0.00 40.05 2.44
4287 4621 6.554605 AGAAGATGAATTTGTCCCCTCAAAAA 59.445 34.615 0.00 0.00 40.05 1.94
4339 4673 1.757682 TTTTTCCTCACGCTGGTTGT 58.242 45.000 0.00 0.00 0.00 3.32
4340 4674 1.757682 TTTTCCTCACGCTGGTTGTT 58.242 45.000 0.00 0.00 0.00 2.83
4341 4675 1.021202 TTTCCTCACGCTGGTTGTTG 58.979 50.000 0.00 0.00 0.00 3.33
4342 4676 1.444119 TTCCTCACGCTGGTTGTTGC 61.444 55.000 0.00 0.00 0.00 4.17
4347 4681 3.952675 CGCTGGTTGTTGCGTGCT 61.953 61.111 0.00 0.00 46.09 4.40
4348 4682 2.050985 GCTGGTTGTTGCGTGCTC 60.051 61.111 0.00 0.00 0.00 4.26
4349 4683 2.249309 CTGGTTGTTGCGTGCTCG 59.751 61.111 3.31 3.31 40.37 5.03
4350 4684 2.202946 TGGTTGTTGCGTGCTCGA 60.203 55.556 13.13 0.00 39.71 4.04
4351 4685 1.568612 CTGGTTGTTGCGTGCTCGAT 61.569 55.000 13.13 0.00 39.71 3.59
4352 4686 1.132640 GGTTGTTGCGTGCTCGATC 59.867 57.895 13.13 1.85 39.71 3.69
4353 4687 1.565156 GGTTGTTGCGTGCTCGATCA 61.565 55.000 13.13 4.48 39.71 2.92
4354 4688 0.234625 GTTGTTGCGTGCTCGATCAA 59.765 50.000 13.13 10.09 39.71 2.57
4355 4689 1.135972 GTTGTTGCGTGCTCGATCAAT 60.136 47.619 13.13 0.00 39.71 2.57
4356 4690 2.003196 TGTTGCGTGCTCGATCAATA 57.997 45.000 13.13 3.31 39.71 1.90
4357 4691 2.549926 TGTTGCGTGCTCGATCAATAT 58.450 42.857 13.13 0.00 39.71 1.28
4358 4692 2.935849 TGTTGCGTGCTCGATCAATATT 59.064 40.909 13.13 0.00 39.71 1.28
4359 4693 3.373748 TGTTGCGTGCTCGATCAATATTT 59.626 39.130 13.13 0.00 39.71 1.40
4360 4694 3.859745 TGCGTGCTCGATCAATATTTC 57.140 42.857 13.13 0.00 39.71 2.17
4361 4695 3.457234 TGCGTGCTCGATCAATATTTCT 58.543 40.909 13.13 0.00 39.71 2.52
4362 4696 3.490896 TGCGTGCTCGATCAATATTTCTC 59.509 43.478 13.13 0.00 39.71 2.87
4363 4697 3.738282 GCGTGCTCGATCAATATTTCTCT 59.262 43.478 13.13 0.00 39.71 3.10
4364 4698 4.917998 GCGTGCTCGATCAATATTTCTCTA 59.082 41.667 13.13 0.00 39.71 2.43
4365 4699 5.574830 GCGTGCTCGATCAATATTTCTCTAT 59.425 40.000 13.13 0.00 39.71 1.98
4366 4700 6.237437 GCGTGCTCGATCAATATTTCTCTATC 60.237 42.308 13.13 0.00 39.71 2.08
4367 4701 7.026562 CGTGCTCGATCAATATTTCTCTATCT 58.973 38.462 1.00 0.00 39.71 1.98
4368 4702 8.178313 CGTGCTCGATCAATATTTCTCTATCTA 58.822 37.037 1.00 0.00 39.71 1.98
4369 4703 9.847706 GTGCTCGATCAATATTTCTCTATCTAA 57.152 33.333 0.00 0.00 0.00 2.10
4388 4722 7.907214 ATCTAAATTCCAATATACTGACGGC 57.093 36.000 0.00 0.00 0.00 5.68
4389 4723 5.924254 TCTAAATTCCAATATACTGACGGCG 59.076 40.000 4.80 4.80 0.00 6.46
4390 4724 4.330944 AATTCCAATATACTGACGGCGA 57.669 40.909 16.62 0.00 0.00 5.54
4391 4725 2.787601 TCCAATATACTGACGGCGAC 57.212 50.000 16.62 8.59 0.00 5.19
4413 4747 2.433145 ACAGCTCGTGTCATGCCG 60.433 61.111 0.00 0.00 31.90 5.69
4414 4748 3.190849 CAGCTCGTGTCATGCCGG 61.191 66.667 0.00 0.00 0.00 6.13
4415 4749 3.695606 AGCTCGTGTCATGCCGGT 61.696 61.111 1.90 0.00 0.00 5.28
4416 4750 2.183300 GCTCGTGTCATGCCGGTA 59.817 61.111 1.90 0.00 0.00 4.02
4417 4751 2.165301 GCTCGTGTCATGCCGGTAC 61.165 63.158 1.90 0.00 0.00 3.34
4418 4752 1.214325 CTCGTGTCATGCCGGTACA 59.786 57.895 1.90 0.00 0.00 2.90
4419 4753 1.076533 CTCGTGTCATGCCGGTACAC 61.077 60.000 16.57 16.57 40.05 2.90
4420 4754 1.373622 CGTGTCATGCCGGTACACA 60.374 57.895 22.40 14.44 42.87 3.72
4421 4755 0.739462 CGTGTCATGCCGGTACACAT 60.739 55.000 22.40 8.83 42.87 3.21
4422 4756 1.006832 GTGTCATGCCGGTACACATC 58.993 55.000 19.72 7.86 42.40 3.06
4423 4757 0.610687 TGTCATGCCGGTACACATCA 59.389 50.000 1.90 0.00 0.00 3.07
4424 4758 1.006832 GTCATGCCGGTACACATCAC 58.993 55.000 1.90 0.00 0.00 3.06
4425 4759 0.610687 TCATGCCGGTACACATCACA 59.389 50.000 1.90 0.00 0.00 3.58
4426 4760 1.002544 TCATGCCGGTACACATCACAA 59.997 47.619 1.90 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.122239 ACACTTCCATGATGATACGTGTTTG 59.878 40.000 0.00 0.00 31.00 2.93
1 2 5.245531 ACACTTCCATGATGATACGTGTTT 58.754 37.500 0.00 0.00 31.00 2.83
2 3 4.832248 ACACTTCCATGATGATACGTGTT 58.168 39.130 0.00 0.00 31.00 3.32
3 4 4.471904 ACACTTCCATGATGATACGTGT 57.528 40.909 0.00 0.00 0.00 4.49
4 5 7.482654 AAATACACTTCCATGATGATACGTG 57.517 36.000 0.00 0.00 0.00 4.49
5 6 8.506168 AAAAATACACTTCCATGATGATACGT 57.494 30.769 0.00 0.00 0.00 3.57
36 37 9.680315 CTAAGCTAGAGTGTATAATGGTTACAC 57.320 37.037 5.97 5.97 46.29 2.90
37 38 9.636789 TCTAAGCTAGAGTGTATAATGGTTACA 57.363 33.333 0.00 0.00 0.00 2.41
74 75 6.652900 ACGTTAAATTTGCCATGCCTATTTTT 59.347 30.769 0.00 0.00 0.00 1.94
108 109 4.481368 TCACCGAGGCAATATAAACTGT 57.519 40.909 0.00 0.00 0.00 3.55
111 112 7.667043 TTATCATCACCGAGGCAATATAAAC 57.333 36.000 0.00 0.00 0.00 2.01
121 122 6.912591 GCAAACTAAAATTATCATCACCGAGG 59.087 38.462 0.00 0.00 0.00 4.63
245 246 9.787532 GATTTTTAGGAATGACAAATCGAATGA 57.212 29.630 8.40 0.00 0.00 2.57
259 260 4.941873 GGACACGGACAGATTTTTAGGAAT 59.058 41.667 0.00 0.00 0.00 3.01
262 263 3.939066 AGGACACGGACAGATTTTTAGG 58.061 45.455 0.00 0.00 0.00 2.69
275 276 7.010183 CACAGAGTGTAATTTTATAGGACACGG 59.990 40.741 0.00 0.00 44.03 4.94
278 279 8.141298 TCCACAGAGTGTAATTTTATAGGACA 57.859 34.615 0.00 0.00 0.00 4.02
313 314 6.639632 TTACGGTTCTACTGACAAGTAAGT 57.360 37.500 0.00 0.00 38.43 2.24
320 321 3.259876 AGGCAATTACGGTTCTACTGACA 59.740 43.478 0.00 0.00 0.00 3.58
323 324 3.617263 GTCAGGCAATTACGGTTCTACTG 59.383 47.826 0.00 0.00 0.00 2.74
333 347 3.153919 TCCCAACTTGTCAGGCAATTAC 58.846 45.455 0.00 0.00 36.36 1.89
341 355 1.341531 AGTCGTCTCCCAACTTGTCAG 59.658 52.381 0.00 0.00 0.00 3.51
373 397 2.671177 CGTGCCGCCTCTTGTTCAG 61.671 63.158 0.00 0.00 0.00 3.02
495 552 0.823356 TTGGCTGGTGACTTGAAGGC 60.823 55.000 0.00 0.00 35.87 4.35
500 557 1.605710 CTGAGTTTGGCTGGTGACTTG 59.394 52.381 0.00 0.00 0.00 3.16
501 558 1.972872 CTGAGTTTGGCTGGTGACTT 58.027 50.000 0.00 0.00 0.00 3.01
550 608 6.331061 AGAGTGATGACTTGTCCGTAAATAC 58.669 40.000 0.00 0.00 30.16 1.89
561 619 4.446994 TGCTAGTGAGAGTGATGACTTG 57.553 45.455 0.00 0.00 30.16 3.16
596 654 8.891671 ACTAAACGTGGTGAGTTATCTAAAAA 57.108 30.769 0.00 0.00 0.00 1.94
597 655 9.410556 GTACTAAACGTGGTGAGTTATCTAAAA 57.589 33.333 0.00 0.00 0.00 1.52
598 656 8.796475 AGTACTAAACGTGGTGAGTTATCTAAA 58.204 33.333 0.00 0.00 0.00 1.85
599 657 8.340618 AGTACTAAACGTGGTGAGTTATCTAA 57.659 34.615 0.00 0.00 0.00 2.10
600 658 7.928307 AGTACTAAACGTGGTGAGTTATCTA 57.072 36.000 0.00 0.00 0.00 1.98
601 659 6.830873 AGTACTAAACGTGGTGAGTTATCT 57.169 37.500 0.00 0.00 0.00 1.98
602 660 9.657121 GTATAGTACTAAACGTGGTGAGTTATC 57.343 37.037 6.70 0.00 0.00 1.75
603 661 9.177608 TGTATAGTACTAAACGTGGTGAGTTAT 57.822 33.333 6.70 0.00 0.00 1.89
604 662 8.560355 TGTATAGTACTAAACGTGGTGAGTTA 57.440 34.615 6.70 0.00 0.00 2.24
605 663 7.452880 TGTATAGTACTAAACGTGGTGAGTT 57.547 36.000 6.70 0.00 0.00 3.01
606 664 7.636150 ATGTATAGTACTAAACGTGGTGAGT 57.364 36.000 6.70 0.00 0.00 3.41
630 688 9.391006 GGTTGAACAAGTATCATCCAGTTAATA 57.609 33.333 0.00 0.00 36.88 0.98
631 689 8.109634 AGGTTGAACAAGTATCATCCAGTTAAT 58.890 33.333 0.00 0.00 38.55 1.40
632 690 7.458397 AGGTTGAACAAGTATCATCCAGTTAA 58.542 34.615 0.00 0.00 38.55 2.01
633 691 7.016153 AGGTTGAACAAGTATCATCCAGTTA 57.984 36.000 0.00 0.00 38.55 2.24
634 692 5.880901 AGGTTGAACAAGTATCATCCAGTT 58.119 37.500 0.00 0.00 38.55 3.16
635 693 5.505181 AGGTTGAACAAGTATCATCCAGT 57.495 39.130 0.00 0.00 38.55 4.00
636 694 9.784531 AATATAGGTTGAACAAGTATCATCCAG 57.215 33.333 0.00 0.00 38.55 3.86
637 695 9.778741 GAATATAGGTTGAACAAGTATCATCCA 57.221 33.333 0.00 0.00 38.55 3.41
638 696 9.220767 GGAATATAGGTTGAACAAGTATCATCC 57.779 37.037 0.00 0.00 37.07 3.51
641 699 8.429641 GGAGGAATATAGGTTGAACAAGTATCA 58.570 37.037 0.00 0.00 0.00 2.15
642 700 7.599245 CGGAGGAATATAGGTTGAACAAGTATC 59.401 40.741 0.00 0.00 0.00 2.24
643 701 7.289317 TCGGAGGAATATAGGTTGAACAAGTAT 59.711 37.037 0.00 0.00 0.00 2.12
644 702 6.608405 TCGGAGGAATATAGGTTGAACAAGTA 59.392 38.462 0.00 0.00 0.00 2.24
645 703 5.424252 TCGGAGGAATATAGGTTGAACAAGT 59.576 40.000 0.00 0.00 0.00 3.16
646 704 5.914033 TCGGAGGAATATAGGTTGAACAAG 58.086 41.667 0.00 0.00 0.00 3.16
647 705 5.943349 TCGGAGGAATATAGGTTGAACAA 57.057 39.130 0.00 0.00 0.00 2.83
648 706 5.943349 TTCGGAGGAATATAGGTTGAACA 57.057 39.130 0.00 0.00 0.00 3.18
649 707 6.990349 TCATTTCGGAGGAATATAGGTTGAAC 59.010 38.462 0.00 0.00 30.88 3.18
650 708 7.131907 TCATTTCGGAGGAATATAGGTTGAA 57.868 36.000 0.00 0.00 30.88 2.69
651 709 6.740944 TCATTTCGGAGGAATATAGGTTGA 57.259 37.500 0.00 0.00 30.88 3.18
652 710 7.801716 TTTCATTTCGGAGGAATATAGGTTG 57.198 36.000 0.00 0.00 30.88 3.77
653 711 8.850156 CATTTTCATTTCGGAGGAATATAGGTT 58.150 33.333 0.00 0.00 30.88 3.50
654 712 7.998964 ACATTTTCATTTCGGAGGAATATAGGT 59.001 33.333 0.00 0.00 30.88 3.08
655 713 8.396272 ACATTTTCATTTCGGAGGAATATAGG 57.604 34.615 0.00 0.00 30.88 2.57
658 716 9.573166 TGATACATTTTCATTTCGGAGGAATAT 57.427 29.630 0.00 0.00 30.88 1.28
659 717 8.972458 TGATACATTTTCATTTCGGAGGAATA 57.028 30.769 0.00 0.00 30.88 1.75
660 718 7.880160 TGATACATTTTCATTTCGGAGGAAT 57.120 32.000 0.00 0.00 30.88 3.01
661 719 7.775093 AGATGATACATTTTCATTTCGGAGGAA 59.225 33.333 0.00 0.00 34.03 3.36
662 720 7.227314 CAGATGATACATTTTCATTTCGGAGGA 59.773 37.037 0.00 0.00 34.03 3.71
663 721 7.227314 TCAGATGATACATTTTCATTTCGGAGG 59.773 37.037 0.00 0.00 34.03 4.30
664 722 8.146479 TCAGATGATACATTTTCATTTCGGAG 57.854 34.615 0.00 0.00 34.03 4.63
665 723 8.681486 ATCAGATGATACATTTTCATTTCGGA 57.319 30.769 0.00 0.00 34.03 4.55
666 724 9.740239 AAATCAGATGATACATTTTCATTTCGG 57.260 29.630 0.00 0.00 34.03 4.30
696 754 9.403583 TGTGTTTCAAGAAGGAAAATAAGTAGT 57.596 29.630 0.00 0.00 38.41 2.73
699 757 7.653311 GCATGTGTTTCAAGAAGGAAAATAAGT 59.347 33.333 0.00 0.00 38.41 2.24
700 758 7.116805 GGCATGTGTTTCAAGAAGGAAAATAAG 59.883 37.037 0.00 0.00 38.41 1.73
701 759 6.928492 GGCATGTGTTTCAAGAAGGAAAATAA 59.072 34.615 0.00 0.00 38.41 1.40
702 760 6.041409 TGGCATGTGTTTCAAGAAGGAAAATA 59.959 34.615 0.00 0.00 38.41 1.40
703 761 5.163322 TGGCATGTGTTTCAAGAAGGAAAAT 60.163 36.000 0.00 0.00 38.41 1.82
704 762 4.161189 TGGCATGTGTTTCAAGAAGGAAAA 59.839 37.500 0.00 0.00 38.41 2.29
705 763 3.703556 TGGCATGTGTTTCAAGAAGGAAA 59.296 39.130 0.00 0.00 34.56 3.13
706 764 3.295093 TGGCATGTGTTTCAAGAAGGAA 58.705 40.909 0.00 0.00 0.00 3.36
707 765 2.942804 TGGCATGTGTTTCAAGAAGGA 58.057 42.857 0.00 0.00 0.00 3.36
708 766 3.731652 TTGGCATGTGTTTCAAGAAGG 57.268 42.857 0.00 0.00 0.00 3.46
709 767 5.987347 AGATTTTGGCATGTGTTTCAAGAAG 59.013 36.000 0.00 0.00 0.00 2.85
710 768 5.754406 CAGATTTTGGCATGTGTTTCAAGAA 59.246 36.000 0.00 0.00 0.00 2.52
711 769 5.163426 ACAGATTTTGGCATGTGTTTCAAGA 60.163 36.000 0.00 0.00 26.06 3.02
712 770 5.050634 CACAGATTTTGGCATGTGTTTCAAG 60.051 40.000 9.46 0.00 38.54 3.02
713 771 4.809958 CACAGATTTTGGCATGTGTTTCAA 59.190 37.500 9.46 0.00 38.54 2.69
714 772 4.370049 CACAGATTTTGGCATGTGTTTCA 58.630 39.130 9.46 0.00 38.54 2.69
715 773 3.184986 GCACAGATTTTGGCATGTGTTTC 59.815 43.478 16.84 0.71 43.84 2.78
716 774 3.132925 GCACAGATTTTGGCATGTGTTT 58.867 40.909 16.84 0.00 43.84 2.83
717 775 2.758009 GCACAGATTTTGGCATGTGTT 58.242 42.857 16.84 0.00 43.84 3.32
718 776 1.336148 CGCACAGATTTTGGCATGTGT 60.336 47.619 16.84 2.20 43.84 3.72
719 777 1.342555 CGCACAGATTTTGGCATGTG 58.657 50.000 12.60 12.60 44.58 3.21
720 778 0.244450 CCGCACAGATTTTGGCATGT 59.756 50.000 0.00 0.00 0.00 3.21
721 779 0.458889 CCCGCACAGATTTTGGCATG 60.459 55.000 0.00 0.00 0.00 4.06
722 780 1.892338 CCCGCACAGATTTTGGCAT 59.108 52.632 0.00 0.00 0.00 4.40
723 781 2.929903 GCCCGCACAGATTTTGGCA 61.930 57.895 0.00 0.00 38.73 4.92
724 782 2.125952 GCCCGCACAGATTTTGGC 60.126 61.111 0.00 0.00 0.00 4.52
725 783 1.302383 TACGCCCGCACAGATTTTGG 61.302 55.000 0.00 0.00 0.00 3.28
726 784 0.732571 ATACGCCCGCACAGATTTTG 59.267 50.000 0.00 0.00 0.00 2.44
727 785 2.319136 TATACGCCCGCACAGATTTT 57.681 45.000 0.00 0.00 0.00 1.82
728 786 2.143122 CATATACGCCCGCACAGATTT 58.857 47.619 0.00 0.00 0.00 2.17
729 787 1.795768 CATATACGCCCGCACAGATT 58.204 50.000 0.00 0.00 0.00 2.40
730 788 0.670546 GCATATACGCCCGCACAGAT 60.671 55.000 0.00 0.00 0.00 2.90
731 789 1.300620 GCATATACGCCCGCACAGA 60.301 57.895 0.00 0.00 0.00 3.41
732 790 0.950555 ATGCATATACGCCCGCACAG 60.951 55.000 0.00 0.00 37.17 3.66
733 791 1.070615 ATGCATATACGCCCGCACA 59.929 52.632 0.00 0.00 37.17 4.57
734 792 1.227999 ACATGCATATACGCCCGCAC 61.228 55.000 0.00 0.00 37.17 5.34
735 793 1.070615 ACATGCATATACGCCCGCA 59.929 52.632 0.00 0.00 39.01 5.69
736 794 1.497278 CACATGCATATACGCCCGC 59.503 57.895 0.00 0.00 0.00 6.13
737 795 0.602638 ACCACATGCATATACGCCCG 60.603 55.000 0.00 0.00 0.00 6.13
738 796 0.874390 CACCACATGCATATACGCCC 59.126 55.000 0.00 0.00 0.00 6.13
739 797 1.593196 ACACCACATGCATATACGCC 58.407 50.000 0.00 0.00 0.00 5.68
740 798 3.312421 AGAAACACCACATGCATATACGC 59.688 43.478 0.00 0.00 0.00 4.42
741 799 4.332543 ACAGAAACACCACATGCATATACG 59.667 41.667 0.00 0.00 0.00 3.06
742 800 5.818136 ACAGAAACACCACATGCATATAC 57.182 39.130 0.00 0.00 0.00 1.47
743 801 7.929941 TTAACAGAAACACCACATGCATATA 57.070 32.000 0.00 0.00 0.00 0.86
744 802 6.832520 TTAACAGAAACACCACATGCATAT 57.167 33.333 0.00 0.00 0.00 1.78
745 803 6.832520 ATTAACAGAAACACCACATGCATA 57.167 33.333 0.00 0.00 0.00 3.14
746 804 5.726980 ATTAACAGAAACACCACATGCAT 57.273 34.783 0.00 0.00 0.00 3.96
747 805 5.528043 AATTAACAGAAACACCACATGCA 57.472 34.783 0.00 0.00 0.00 3.96
748 806 5.405269 GGAAATTAACAGAAACACCACATGC 59.595 40.000 0.00 0.00 0.00 4.06
749 807 6.511416 TGGAAATTAACAGAAACACCACATG 58.489 36.000 0.00 0.00 0.00 3.21
750 808 6.723298 TGGAAATTAACAGAAACACCACAT 57.277 33.333 0.00 0.00 0.00 3.21
751 809 6.322456 TCATGGAAATTAACAGAAACACCACA 59.678 34.615 0.00 0.00 0.00 4.17
752 810 6.744112 TCATGGAAATTAACAGAAACACCAC 58.256 36.000 0.00 0.00 0.00 4.16
753 811 6.968263 TCATGGAAATTAACAGAAACACCA 57.032 33.333 0.00 0.00 0.00 4.17
754 812 7.601856 TCATCATGGAAATTAACAGAAACACC 58.398 34.615 0.00 0.00 0.00 4.16
755 813 9.643693 ATTCATCATGGAAATTAACAGAAACAC 57.356 29.630 0.00 0.00 0.00 3.32
780 838 9.694137 GGAGCTGTTTTAGACGAGTATAATAAT 57.306 33.333 0.00 0.00 0.00 1.28
781 839 8.139989 GGGAGCTGTTTTAGACGAGTATAATAA 58.860 37.037 0.00 0.00 0.00 1.40
782 840 7.521099 CGGGAGCTGTTTTAGACGAGTATAATA 60.521 40.741 0.00 0.00 0.00 0.98
783 841 6.514063 GGGAGCTGTTTTAGACGAGTATAAT 58.486 40.000 0.00 0.00 0.00 1.28
784 842 5.449588 CGGGAGCTGTTTTAGACGAGTATAA 60.450 44.000 0.00 0.00 0.00 0.98
785 843 4.036027 CGGGAGCTGTTTTAGACGAGTATA 59.964 45.833 0.00 0.00 0.00 1.47
786 844 3.181489 CGGGAGCTGTTTTAGACGAGTAT 60.181 47.826 0.00 0.00 0.00 2.12
787 845 2.163010 CGGGAGCTGTTTTAGACGAGTA 59.837 50.000 0.00 0.00 0.00 2.59
788 846 1.067776 CGGGAGCTGTTTTAGACGAGT 60.068 52.381 0.00 0.00 0.00 4.18
789 847 1.201647 TCGGGAGCTGTTTTAGACGAG 59.798 52.381 0.00 0.00 0.00 4.18
790 848 1.250328 TCGGGAGCTGTTTTAGACGA 58.750 50.000 0.00 0.00 0.00 4.20
791 849 2.074547 TTCGGGAGCTGTTTTAGACG 57.925 50.000 0.00 0.00 0.00 4.18
792 850 3.188667 CCTTTTCGGGAGCTGTTTTAGAC 59.811 47.826 0.00 0.00 0.00 2.59
793 851 3.071892 TCCTTTTCGGGAGCTGTTTTAGA 59.928 43.478 0.00 0.00 0.00 2.10
794 852 3.408634 TCCTTTTCGGGAGCTGTTTTAG 58.591 45.455 0.00 0.00 0.00 1.85
795 853 3.495434 TCCTTTTCGGGAGCTGTTTTA 57.505 42.857 0.00 0.00 0.00 1.52
796 854 2.358322 TCCTTTTCGGGAGCTGTTTT 57.642 45.000 0.00 0.00 0.00 2.43
823 882 0.747255 TCTCTGCAGGAATCTACCGC 59.253 55.000 15.13 0.00 34.73 5.68
836 895 7.926555 TGTAAGCCATATTTACTTACTCTCTGC 59.073 37.037 15.26 0.00 43.88 4.26
873 932 1.885887 TGCTGTGGGTTTATTGCACTC 59.114 47.619 0.00 0.00 0.00 3.51
878 937 2.421424 GAGCTCTGCTGTGGGTTTATTG 59.579 50.000 6.43 0.00 39.88 1.90
885 944 3.827008 TTATTAGAGCTCTGCTGTGGG 57.173 47.619 26.78 0.00 39.88 4.61
891 950 2.939942 GCGCTTTATTAGAGCTCTGC 57.060 50.000 26.78 17.90 45.15 4.26
947 1006 4.400961 ACTGCGAGCCTGCCCTTC 62.401 66.667 0.00 0.00 0.00 3.46
967 1026 2.025155 TGGGTTCTATGAGCTCGTCTC 58.975 52.381 12.83 0.00 42.23 3.36
968 1027 2.145397 TGGGTTCTATGAGCTCGTCT 57.855 50.000 12.83 0.00 0.00 4.18
986 1046 3.136123 CCATGGCACCGCTCCTTG 61.136 66.667 0.00 0.00 0.00 3.61
996 1056 1.522092 GACCGAGATCACCATGGCA 59.478 57.895 13.04 0.00 0.00 4.92
1068 1128 1.675641 GCATCGAAGGGGCTTGTGT 60.676 57.895 0.00 0.00 0.00 3.72
1312 1372 1.277557 AGCAGAGCGAAACTGAAGGAT 59.722 47.619 0.00 0.00 37.54 3.24
1313 1373 0.681733 AGCAGAGCGAAACTGAAGGA 59.318 50.000 0.00 0.00 37.54 3.36
1314 1374 1.074752 GAGCAGAGCGAAACTGAAGG 58.925 55.000 0.00 0.00 37.54 3.46
1315 1375 1.991965 GAGAGCAGAGCGAAACTGAAG 59.008 52.381 0.00 0.00 37.54 3.02
1316 1376 1.667177 CGAGAGCAGAGCGAAACTGAA 60.667 52.381 0.00 0.00 37.54 3.02
1317 1377 0.109551 CGAGAGCAGAGCGAAACTGA 60.110 55.000 0.00 0.00 37.54 3.41
1318 1378 2.357792 CGAGAGCAGAGCGAAACTG 58.642 57.895 0.00 0.00 38.27 3.16
1319 1379 4.878774 CGAGAGCAGAGCGAAACT 57.121 55.556 0.00 0.00 0.00 2.66
1336 1396 3.545633 CGAAACTGAAGCTGTAACTTGC 58.454 45.455 0.00 0.00 0.00 4.01
1337 1397 3.545633 GCGAAACTGAAGCTGTAACTTG 58.454 45.455 0.00 0.00 0.00 3.16
1346 1406 0.889186 TTGGAGGGCGAAACTGAAGC 60.889 55.000 0.00 0.00 0.00 3.86
1606 1670 2.114670 CAAATCGACGGCAGGCCAT 61.115 57.895 5.01 0.00 35.37 4.40
1607 1671 2.745884 CAAATCGACGGCAGGCCA 60.746 61.111 5.01 0.00 35.37 5.36
1623 1690 1.300542 TCGTGCATTGTCGCTGTCA 60.301 52.632 0.00 0.00 0.00 3.58
1642 1709 1.403679 ACAACAACACACACAATCCGG 59.596 47.619 0.00 0.00 0.00 5.14
1647 1714 5.384063 AATCAGAACAACAACACACACAA 57.616 34.783 0.00 0.00 0.00 3.33
1651 1718 7.985634 ATAACAAATCAGAACAACAACACAC 57.014 32.000 0.00 0.00 0.00 3.82
1652 1719 8.994429 AAATAACAAATCAGAACAACAACACA 57.006 26.923 0.00 0.00 0.00 3.72
1653 1720 9.687717 CAAAATAACAAATCAGAACAACAACAC 57.312 29.630 0.00 0.00 0.00 3.32
1674 1766 3.384467 CCACCACCTCACTGAAACAAAAT 59.616 43.478 0.00 0.00 0.00 1.82
1862 1979 1.691434 GAAAATCCCCAGTTTGCACCA 59.309 47.619 0.00 0.00 0.00 4.17
1885 2002 3.710677 CTCCTCCTGAATCCTGATCAGTT 59.289 47.826 21.11 10.00 42.19 3.16
1905 2022 4.380233 CCAAGTTCATGGTTTCAGATGCTC 60.380 45.833 0.00 0.00 35.65 4.26
1920 2037 3.109847 GTGGAACCTGCCAAGTTCA 57.890 52.632 8.36 0.00 44.40 3.18
1950 2067 2.663196 GACGGGCAGTAGCACCTT 59.337 61.111 0.00 0.00 42.77 3.50
2076 2193 1.424493 CGAAGCTCGAAGACATGCCC 61.424 60.000 0.00 0.00 43.74 5.36
2133 2250 0.312102 GTCAACCAACCAAGCAGAGC 59.688 55.000 0.00 0.00 0.00 4.09
2193 2311 1.376424 CATCAGCAGAACAGCGGGT 60.376 57.895 0.00 0.00 40.15 5.28
2314 2432 1.510480 GCCTGATTCCTGCCGCATAC 61.510 60.000 0.00 0.00 0.00 2.39
2351 2469 2.183679 GGACCTTCCATGTCAGAGACT 58.816 52.381 0.00 0.00 36.28 3.24
2355 2473 1.279496 CAGGGACCTTCCATGTCAGA 58.721 55.000 0.00 0.00 42.90 3.27
2430 2548 2.047465 AGTCGCTTGCAGCAGAGG 60.047 61.111 0.00 0.00 42.58 3.69
2433 2551 0.659417 CAAACAGTCGCTTGCAGCAG 60.659 55.000 0.00 0.00 42.58 4.24
2559 2677 9.277783 GTAATGAAGAGTCATAAGGCATAACAT 57.722 33.333 0.00 0.00 44.02 2.71
2561 2679 8.768955 CAGTAATGAAGAGTCATAAGGCATAAC 58.231 37.037 0.00 0.00 44.02 1.89
2571 2864 5.485353 TCCAGTTCCAGTAATGAAGAGTCAT 59.515 40.000 0.00 0.00 46.91 3.06
2597 2890 5.116882 CAGAAATGCATCAGTCAGATCAGA 58.883 41.667 0.00 0.00 33.72 3.27
2598 2891 4.273724 CCAGAAATGCATCAGTCAGATCAG 59.726 45.833 0.00 0.00 33.72 2.90
2692 2985 0.978146 AGACCTGTCCGGGGATGAAG 60.978 60.000 0.00 0.00 36.97 3.02
2757 3050 6.073765 CCGACTAAATCATTTTGATAGGGTCG 60.074 42.308 19.77 19.77 43.19 4.79
2771 3064 6.642707 AATTTGTTTGGACCGACTAAATCA 57.357 33.333 3.84 0.00 32.07 2.57
2876 3191 6.375455 ACTTTAGTTAATGTGAGGATGGCAAG 59.625 38.462 0.00 0.00 0.00 4.01
2939 3255 9.927668 TTCAGAAAAGATAAATCCCAAATGTTC 57.072 29.630 0.00 0.00 0.00 3.18
2977 3293 7.506328 AGTTACCCCGCAAAATTTATAGATC 57.494 36.000 0.00 0.00 0.00 2.75
2983 3299 6.897706 AGTTTAGTTACCCCGCAAAATTTA 57.102 33.333 0.00 0.00 0.00 1.40
2987 3303 3.752747 GCTAGTTTAGTTACCCCGCAAAA 59.247 43.478 0.00 0.00 0.00 2.44
3003 3319 5.619533 GCACTCGTAGTTAGTTGAGCTAGTT 60.620 44.000 0.00 0.00 31.64 2.24
3097 3413 6.145338 TGATAAGATCTCGGTGGAAGTAAC 57.855 41.667 0.00 0.00 0.00 2.50
3122 3443 6.583050 CGCCTAAATGTTAGCTAGAGACATAC 59.417 42.308 9.42 0.00 33.88 2.39
3145 3466 6.483640 ACTTCCTGGATGATAAAAGATTACGC 59.516 38.462 15.76 0.00 0.00 4.42
3147 3468 9.495572 CCTACTTCCTGGATGATAAAAGATTAC 57.504 37.037 15.76 0.00 0.00 1.89
3149 3470 7.350921 TCCCTACTTCCTGGATGATAAAAGATT 59.649 37.037 15.76 0.00 0.00 2.40
3162 3483 1.408822 GGCACATTCCCTACTTCCTGG 60.409 57.143 0.00 0.00 0.00 4.45
3231 3552 2.558313 GCAACTTGTCTCGCAGCC 59.442 61.111 0.00 0.00 0.00 4.85
3324 3645 0.736325 CCCTCACGATGTCGAACACC 60.736 60.000 9.67 0.00 43.02 4.16
3366 3687 2.660064 CCGGGTTAGAGCAGCAGGT 61.660 63.158 0.00 0.00 0.00 4.00
3372 3693 1.764854 GGGGATCCGGGTTAGAGCA 60.765 63.158 5.45 0.00 0.00 4.26
3407 3728 9.242477 CGCGAGTTCATATATGATATGAGAATT 57.758 33.333 16.06 0.00 36.56 2.17
3417 3738 3.572682 AGGTTCCGCGAGTTCATATATGA 59.427 43.478 8.23 11.49 34.44 2.15
3429 3750 0.816018 TTCTGCAAAAGGTTCCGCGA 60.816 50.000 8.23 0.00 0.00 5.87
3577 3898 9.646522 AGGAGCACCAACATAGATTATTAATTT 57.353 29.630 2.07 0.00 38.94 1.82
3578 3899 9.646522 AAGGAGCACCAACATAGATTATTAATT 57.353 29.630 2.07 0.00 38.94 1.40
3579 3900 9.646522 AAAGGAGCACCAACATAGATTATTAAT 57.353 29.630 2.07 0.00 38.94 1.40
3580 3901 9.474313 AAAAGGAGCACCAACATAGATTATTAA 57.526 29.630 2.07 0.00 38.94 1.40
3581 3902 9.120538 GAAAAGGAGCACCAACATAGATTATTA 57.879 33.333 2.07 0.00 38.94 0.98
3582 3903 7.836183 AGAAAAGGAGCACCAACATAGATTATT 59.164 33.333 2.07 0.00 38.94 1.40
3583 3904 7.349598 AGAAAAGGAGCACCAACATAGATTAT 58.650 34.615 2.07 0.00 38.94 1.28
3584 3905 6.721318 AGAAAAGGAGCACCAACATAGATTA 58.279 36.000 2.07 0.00 38.94 1.75
3585 3906 5.574188 AGAAAAGGAGCACCAACATAGATT 58.426 37.500 2.07 0.00 38.94 2.40
3586 3907 5.184892 AGAAAAGGAGCACCAACATAGAT 57.815 39.130 2.07 0.00 38.94 1.98
3587 3908 4.640771 AGAAAAGGAGCACCAACATAGA 57.359 40.909 2.07 0.00 38.94 1.98
3588 3909 6.817765 TTTAGAAAAGGAGCACCAACATAG 57.182 37.500 2.07 0.00 38.94 2.23
3589 3910 7.068839 TGTTTTTAGAAAAGGAGCACCAACATA 59.931 33.333 2.07 0.00 38.94 2.29
3590 3911 6.127196 TGTTTTTAGAAAAGGAGCACCAACAT 60.127 34.615 2.07 0.00 38.94 2.71
3591 3912 5.186021 TGTTTTTAGAAAAGGAGCACCAACA 59.814 36.000 2.07 0.00 38.94 3.33
3592 3913 5.656480 TGTTTTTAGAAAAGGAGCACCAAC 58.344 37.500 2.07 0.00 38.94 3.77
3593 3914 5.923733 TGTTTTTAGAAAAGGAGCACCAA 57.076 34.783 2.07 0.00 38.94 3.67
3594 3915 5.923733 TTGTTTTTAGAAAAGGAGCACCA 57.076 34.783 2.07 0.00 38.94 4.17
3595 3916 7.603963 TTTTTGTTTTTAGAAAAGGAGCACC 57.396 32.000 0.00 0.00 0.00 5.01
3627 3948 4.160252 ACAGAAGCACCAACACAGATTTTT 59.840 37.500 0.00 0.00 0.00 1.94
3628 3949 3.701040 ACAGAAGCACCAACACAGATTTT 59.299 39.130 0.00 0.00 0.00 1.82
3629 3950 3.290710 ACAGAAGCACCAACACAGATTT 58.709 40.909 0.00 0.00 0.00 2.17
3630 3951 2.936202 ACAGAAGCACCAACACAGATT 58.064 42.857 0.00 0.00 0.00 2.40
3631 3952 2.645838 ACAGAAGCACCAACACAGAT 57.354 45.000 0.00 0.00 0.00 2.90
3632 3953 2.434336 ACTACAGAAGCACCAACACAGA 59.566 45.455 0.00 0.00 0.00 3.41
3633 3954 2.545526 CACTACAGAAGCACCAACACAG 59.454 50.000 0.00 0.00 0.00 3.66
3634 3955 2.560504 CACTACAGAAGCACCAACACA 58.439 47.619 0.00 0.00 0.00 3.72
3635 3956 1.264288 GCACTACAGAAGCACCAACAC 59.736 52.381 0.00 0.00 0.00 3.32
3636 3957 1.140852 AGCACTACAGAAGCACCAACA 59.859 47.619 0.00 0.00 0.00 3.33
3637 3958 1.884235 AGCACTACAGAAGCACCAAC 58.116 50.000 0.00 0.00 0.00 3.77
3638 3959 2.158827 TCAAGCACTACAGAAGCACCAA 60.159 45.455 0.00 0.00 0.00 3.67
3639 3960 1.416030 TCAAGCACTACAGAAGCACCA 59.584 47.619 0.00 0.00 0.00 4.17
3640 3961 1.801178 GTCAAGCACTACAGAAGCACC 59.199 52.381 0.00 0.00 0.00 5.01
3641 3962 2.478134 CAGTCAAGCACTACAGAAGCAC 59.522 50.000 0.00 0.00 32.21 4.40
3642 3963 2.759191 CAGTCAAGCACTACAGAAGCA 58.241 47.619 0.00 0.00 32.21 3.91
3643 3964 1.462670 GCAGTCAAGCACTACAGAAGC 59.537 52.381 0.00 0.00 32.21 3.86
3644 3965 3.037431 AGCAGTCAAGCACTACAGAAG 57.963 47.619 0.00 0.00 36.85 2.85
3645 3966 3.133691 CAAGCAGTCAAGCACTACAGAA 58.866 45.455 0.00 0.00 36.85 3.02
3743 4064 3.385314 AAGTACTACTCCCTCTGTCCC 57.615 52.381 0.00 0.00 0.00 4.46
3744 4065 5.741962 AAAAAGTACTACTCCCTCTGTCC 57.258 43.478 0.00 0.00 0.00 4.02
3765 4086 7.266905 ACTACTCCCTCTGCCTTATTAAAAA 57.733 36.000 0.00 0.00 0.00 1.94
3766 4087 6.886178 ACTACTCCCTCTGCCTTATTAAAA 57.114 37.500 0.00 0.00 0.00 1.52
3767 4088 7.130775 AGTACTACTCCCTCTGCCTTATTAAA 58.869 38.462 0.00 0.00 0.00 1.52
3768 4089 6.680540 AGTACTACTCCCTCTGCCTTATTAA 58.319 40.000 0.00 0.00 0.00 1.40
3769 4090 6.277064 AGTACTACTCCCTCTGCCTTATTA 57.723 41.667 0.00 0.00 0.00 0.98
3770 4091 5.145513 AGTACTACTCCCTCTGCCTTATT 57.854 43.478 0.00 0.00 0.00 1.40
3771 4092 4.817874 AGTACTACTCCCTCTGCCTTAT 57.182 45.455 0.00 0.00 0.00 1.73
3772 4093 4.604784 AAGTACTACTCCCTCTGCCTTA 57.395 45.455 0.00 0.00 0.00 2.69
3773 4094 3.476485 AAGTACTACTCCCTCTGCCTT 57.524 47.619 0.00 0.00 0.00 4.35
3774 4095 3.528491 ACTAAGTACTACTCCCTCTGCCT 59.472 47.826 0.00 0.00 0.00 4.75
3775 4096 3.900971 ACTAAGTACTACTCCCTCTGCC 58.099 50.000 0.00 0.00 0.00 4.85
3776 4097 5.683681 AGTACTAAGTACTACTCCCTCTGC 58.316 45.833 0.00 0.00 45.99 4.26
3805 4126 8.992813 AATGTTGGGCCATTTATTTCGGAACG 62.993 42.308 7.26 0.00 42.42 3.95
3806 4127 3.056465 TGTTGGGCCATTTATTTCGGAAC 60.056 43.478 7.26 0.00 0.00 3.62
3807 4128 3.165875 TGTTGGGCCATTTATTTCGGAA 58.834 40.909 7.26 0.00 0.00 4.30
3808 4129 2.808919 TGTTGGGCCATTTATTTCGGA 58.191 42.857 7.26 0.00 0.00 4.55
3809 4130 3.817709 ATGTTGGGCCATTTATTTCGG 57.182 42.857 7.26 0.00 0.00 4.30
3818 4139 6.619329 AATTTTAGTACAATGTTGGGCCAT 57.381 33.333 7.26 0.00 0.00 4.40
3855 4187 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3856 4188 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3860 4192 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3869 4201 1.823610 GCTACAACTACTCCCTCCGTT 59.176 52.381 0.00 0.00 0.00 4.44
3875 4207 0.531200 ACTGCGCTACAACTACTCCC 59.469 55.000 9.73 0.00 0.00 4.30
3919 4251 7.097834 CCCTCTCCCTACGATTTCATATAAAC 58.902 42.308 0.00 0.00 0.00 2.01
4033 4366 4.225042 CAGCCCAATAGCCCATAGTATGTA 59.775 45.833 9.28 0.00 0.00 2.29
4034 4367 3.009473 CAGCCCAATAGCCCATAGTATGT 59.991 47.826 9.28 0.00 0.00 2.29
4035 4368 3.614092 CAGCCCAATAGCCCATAGTATG 58.386 50.000 2.90 2.90 0.00 2.39
4039 4372 1.067295 TCCAGCCCAATAGCCCATAG 58.933 55.000 0.00 0.00 0.00 2.23
4040 4373 1.759101 ATCCAGCCCAATAGCCCATA 58.241 50.000 0.00 0.00 0.00 2.74
4041 4374 0.862554 AATCCAGCCCAATAGCCCAT 59.137 50.000 0.00 0.00 0.00 4.00
4042 4375 0.185901 GAATCCAGCCCAATAGCCCA 59.814 55.000 0.00 0.00 0.00 5.36
4043 4376 0.480252 AGAATCCAGCCCAATAGCCC 59.520 55.000 0.00 0.00 0.00 5.19
4044 4377 1.879796 CGAGAATCCAGCCCAATAGCC 60.880 57.143 0.00 0.00 0.00 3.93
4045 4378 1.070758 TCGAGAATCCAGCCCAATAGC 59.929 52.381 0.00 0.00 0.00 2.97
4046 4379 2.103094 TGTCGAGAATCCAGCCCAATAG 59.897 50.000 0.00 0.00 0.00 1.73
4047 4380 2.115427 TGTCGAGAATCCAGCCCAATA 58.885 47.619 0.00 0.00 0.00 1.90
4048 4381 0.911769 TGTCGAGAATCCAGCCCAAT 59.088 50.000 0.00 0.00 0.00 3.16
4049 4382 0.911769 ATGTCGAGAATCCAGCCCAA 59.088 50.000 0.00 0.00 0.00 4.12
4054 4387 3.422417 ACGTGTATGTCGAGAATCCAG 57.578 47.619 0.00 0.00 0.00 3.86
4066 4400 7.270793 GCGAGTTTATCCTCTAATACGTGTATG 59.729 40.741 0.00 0.00 0.00 2.39
4074 4408 7.778083 TGAGTTTGCGAGTTTATCCTCTAATA 58.222 34.615 0.00 0.00 0.00 0.98
4078 4412 4.537135 TGAGTTTGCGAGTTTATCCTCT 57.463 40.909 0.00 0.00 0.00 3.69
4085 4419 6.199393 GTTGAGTTATTGAGTTTGCGAGTTT 58.801 36.000 0.00 0.00 0.00 2.66
4131 4465 8.036575 TGATTTAAGCTTGATTCCAAAAGGATG 58.963 33.333 9.86 0.00 0.00 3.51
4163 4497 9.396022 GAGTGGAATATGGTTTTAATTGAGAGA 57.604 33.333 0.00 0.00 0.00 3.10
4190 4524 1.261938 TGATACCCCACGGACCACTG 61.262 60.000 0.00 0.00 0.00 3.66
4203 4537 7.254932 GCTTTCTCCTTGTGTGATTATGATACC 60.255 40.741 0.00 0.00 0.00 2.73
4223 4557 5.495640 CTCACCTTTAGGATCTTGCTTTCT 58.504 41.667 2.06 0.00 38.94 2.52
4236 4570 5.667539 TGAGATGAGTTCCTCACCTTTAG 57.332 43.478 0.00 0.00 43.63 1.85
4237 4571 5.721480 TGATGAGATGAGTTCCTCACCTTTA 59.279 40.000 0.00 0.00 43.63 1.85
4238 4572 4.533707 TGATGAGATGAGTTCCTCACCTTT 59.466 41.667 0.00 0.00 43.63 3.11
4245 4579 6.811634 ATCTTCTTGATGAGATGAGTTCCT 57.188 37.500 0.00 0.00 40.60 3.36
4320 4654 1.757682 ACAACCAGCGTGAGGAAAAA 58.242 45.000 0.00 0.00 0.00 1.94
4321 4655 1.403679 CAACAACCAGCGTGAGGAAAA 59.596 47.619 0.00 0.00 0.00 2.29
4322 4656 1.021202 CAACAACCAGCGTGAGGAAA 58.979 50.000 0.00 0.00 0.00 3.13
4323 4657 1.444119 GCAACAACCAGCGTGAGGAA 61.444 55.000 0.00 0.00 0.00 3.36
4324 4658 1.891919 GCAACAACCAGCGTGAGGA 60.892 57.895 0.00 0.00 0.00 3.71
4325 4659 2.639286 GCAACAACCAGCGTGAGG 59.361 61.111 0.00 0.00 0.00 3.86
4331 4665 2.050985 GAGCACGCAACAACCAGC 60.051 61.111 0.00 0.00 0.00 4.85
4332 4666 1.568612 ATCGAGCACGCAACAACCAG 61.569 55.000 0.00 0.00 39.58 4.00
4333 4667 1.565156 GATCGAGCACGCAACAACCA 61.565 55.000 0.00 0.00 39.58 3.67
4334 4668 1.132640 GATCGAGCACGCAACAACC 59.867 57.895 0.00 0.00 39.58 3.77
4335 4669 0.234625 TTGATCGAGCACGCAACAAC 59.765 50.000 1.08 0.00 39.58 3.32
4336 4670 1.155889 ATTGATCGAGCACGCAACAA 58.844 45.000 1.08 5.62 39.58 2.83
4337 4671 2.003196 TATTGATCGAGCACGCAACA 57.997 45.000 1.08 0.00 39.58 3.33
4338 4672 3.592381 AATATTGATCGAGCACGCAAC 57.408 42.857 1.08 0.00 39.58 4.17
4339 4673 3.871006 AGAAATATTGATCGAGCACGCAA 59.129 39.130 1.08 0.00 39.58 4.85
4340 4674 3.457234 AGAAATATTGATCGAGCACGCA 58.543 40.909 1.08 0.00 39.58 5.24
4341 4675 3.738282 AGAGAAATATTGATCGAGCACGC 59.262 43.478 1.08 0.00 39.58 5.34
4342 4676 7.026562 AGATAGAGAAATATTGATCGAGCACG 58.973 38.462 1.08 0.00 41.26 5.34
4343 4677 9.847706 TTAGATAGAGAAATATTGATCGAGCAC 57.152 33.333 1.08 0.00 0.00 4.40
4362 4696 9.088512 GCCGTCAGTATATTGGAATTTAGATAG 57.911 37.037 0.00 0.00 0.00 2.08
4363 4697 7.758076 CGCCGTCAGTATATTGGAATTTAGATA 59.242 37.037 0.00 0.00 0.00 1.98
4364 4698 6.590292 CGCCGTCAGTATATTGGAATTTAGAT 59.410 38.462 0.00 0.00 0.00 1.98
4365 4699 5.924254 CGCCGTCAGTATATTGGAATTTAGA 59.076 40.000 0.00 0.00 0.00 2.10
4366 4700 5.924254 TCGCCGTCAGTATATTGGAATTTAG 59.076 40.000 0.00 0.00 0.00 1.85
4367 4701 5.693104 GTCGCCGTCAGTATATTGGAATTTA 59.307 40.000 0.00 0.00 0.00 1.40
4368 4702 4.510340 GTCGCCGTCAGTATATTGGAATTT 59.490 41.667 0.00 0.00 0.00 1.82
4369 4703 4.056050 GTCGCCGTCAGTATATTGGAATT 58.944 43.478 0.00 0.00 0.00 2.17
4370 4704 3.650139 GTCGCCGTCAGTATATTGGAAT 58.350 45.455 0.00 0.00 0.00 3.01
4371 4705 2.542205 CGTCGCCGTCAGTATATTGGAA 60.542 50.000 0.00 0.00 0.00 3.53
4372 4706 1.002142 CGTCGCCGTCAGTATATTGGA 60.002 52.381 0.00 0.00 0.00 3.53
4373 4707 1.002142 TCGTCGCCGTCAGTATATTGG 60.002 52.381 0.00 0.00 35.01 3.16
4374 4708 2.041966 GTCGTCGCCGTCAGTATATTG 58.958 52.381 0.00 0.00 35.01 1.90
4375 4709 1.333524 CGTCGTCGCCGTCAGTATATT 60.334 52.381 0.00 0.00 35.01 1.28
4376 4710 0.234106 CGTCGTCGCCGTCAGTATAT 59.766 55.000 0.00 0.00 35.01 0.86
4377 4711 0.805711 TCGTCGTCGCCGTCAGTATA 60.806 55.000 0.00 0.00 36.96 1.47
4378 4712 2.102438 TCGTCGTCGCCGTCAGTAT 61.102 57.895 0.00 0.00 36.96 2.12
4379 4713 2.738139 TCGTCGTCGCCGTCAGTA 60.738 61.111 0.00 0.00 36.96 2.74
4380 4714 4.380628 GTCGTCGTCGCCGTCAGT 62.381 66.667 0.00 0.00 36.96 3.41
4381 4715 4.379143 TGTCGTCGTCGCCGTCAG 62.379 66.667 0.00 0.00 36.96 3.51
4382 4716 4.379143 CTGTCGTCGTCGCCGTCA 62.379 66.667 0.00 0.00 36.96 4.35
4396 4730 2.433145 CGGCATGACACGAGCTGT 60.433 61.111 0.00 0.00 34.96 4.40
4397 4731 2.557059 TACCGGCATGACACGAGCTG 62.557 60.000 0.00 0.00 0.00 4.24
4398 4732 2.348104 TACCGGCATGACACGAGCT 61.348 57.895 0.00 0.00 0.00 4.09
4399 4733 2.165301 GTACCGGCATGACACGAGC 61.165 63.158 0.00 0.00 0.00 5.03
4400 4734 1.076533 GTGTACCGGCATGACACGAG 61.077 60.000 0.00 0.00 34.64 4.18
4401 4735 1.080366 GTGTACCGGCATGACACGA 60.080 57.895 0.00 0.00 34.64 4.35
4402 4736 0.739462 ATGTGTACCGGCATGACACG 60.739 55.000 18.87 0.00 45.18 4.49
4403 4737 1.006832 GATGTGTACCGGCATGACAC 58.993 55.000 17.90 17.90 43.06 3.67
4404 4738 0.610687 TGATGTGTACCGGCATGACA 59.389 50.000 0.00 0.00 0.00 3.58
4405 4739 1.006832 GTGATGTGTACCGGCATGAC 58.993 55.000 0.00 0.00 0.00 3.06
4406 4740 0.610687 TGTGATGTGTACCGGCATGA 59.389 50.000 0.00 0.00 0.00 3.07
4407 4741 1.447945 TTGTGATGTGTACCGGCATG 58.552 50.000 0.00 0.00 0.00 4.06
4408 4742 3.946604 TTGTGATGTGTACCGGCAT 57.053 47.368 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.