Multiple sequence alignment - TraesCS4B01G100400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G100400 chr4B 100.000 3881 0 0 1 3881 106050383 106046503 0.000000e+00 7167.0
1 TraesCS4B01G100400 chr4B 76.768 1188 241 26 1005 2179 106060288 106059123 1.970000e-177 632.0
2 TraesCS4B01G100400 chr4B 93.165 278 18 1 3604 3880 581110778 581111055 1.300000e-109 407.0
3 TraesCS4B01G100400 chr4B 100.000 172 0 0 2576 2747 78609318 78609147 6.260000e-83 318.0
4 TraesCS4B01G100400 chr4B 98.870 177 0 2 2573 2747 598406300 598406476 8.090000e-82 315.0
5 TraesCS4B01G100400 chr4B 95.025 201 5 5 2567 2763 518151253 518151054 1.050000e-80 311.0
6 TraesCS4B01G100400 chr4A 93.276 1755 87 10 831 2578 514353111 514354841 0.000000e+00 2558.0
7 TraesCS4B01G100400 chr4A 94.282 752 37 2 2746 3496 514354825 514355571 0.000000e+00 1146.0
8 TraesCS4B01G100400 chr4A 76.578 1204 239 30 1005 2189 514341541 514342720 4.260000e-174 621.0
9 TraesCS4B01G100400 chr4A 83.696 552 63 10 2 531 514345379 514345925 2.690000e-136 496.0
10 TraesCS4B01G100400 chr4A 94.265 279 14 2 3604 3881 514355571 514355848 3.580000e-115 425.0
11 TraesCS4B01G100400 chr4A 98.315 178 2 1 2569 2746 564649492 564649668 1.050000e-80 311.0
12 TraesCS4B01G100400 chr4A 89.759 166 17 0 648 813 85895548 85895713 3.040000e-51 213.0
13 TraesCS4B01G100400 chr4D 93.816 1698 70 13 816 2506 73993701 73992032 0.000000e+00 2521.0
14 TraesCS4B01G100400 chr4D 92.049 566 40 3 2 567 73994268 73993708 0.000000e+00 791.0
15 TraesCS4B01G100400 chr4D 92.200 500 30 7 2746 3242 73992004 73991511 0.000000e+00 699.0
16 TraesCS4B01G100400 chr4D 77.498 1191 227 32 1005 2179 73997974 73996809 0.000000e+00 676.0
17 TraesCS4B01G100400 chr4D 93.349 436 19 4 2746 3178 73991118 73990690 1.520000e-178 636.0
18 TraesCS4B01G100400 chr4D 95.770 331 14 0 3169 3499 73989702 73989372 5.710000e-148 534.0
19 TraesCS4B01G100400 chr4D 90.777 412 7 3 2198 2578 73991513 73991102 4.440000e-144 521.0
20 TraesCS4B01G100400 chr4D 94.286 280 14 2 3604 3881 73989372 73989093 9.960000e-116 427.0
21 TraesCS4B01G100400 chr4D 84.685 111 14 2 3498 3608 454809860 454809967 1.470000e-19 108.0
22 TraesCS4B01G100400 chr2D 83.949 785 104 8 998 1780 586571373 586572137 0.000000e+00 732.0
23 TraesCS4B01G100400 chr2D 82.908 784 108 12 1001 1780 586693200 586693961 0.000000e+00 682.0
24 TraesCS4B01G100400 chr2D 81.940 598 87 12 1172 1768 586769208 586769785 1.620000e-133 486.0
25 TraesCS4B01G100400 chr2D 85.526 456 61 5 1785 2237 586693993 586694446 4.540000e-129 472.0
26 TraesCS4B01G100400 chr2D 85.421 439 62 2 1785 2222 586572169 586572606 4.570000e-124 455.0
27 TraesCS4B01G100400 chr2D 88.535 157 14 4 2294 2449 586770304 586770457 1.840000e-43 187.0
28 TraesCS4B01G100400 chr2D 87.261 157 16 4 2294 2449 586694464 586694617 3.990000e-40 176.0
29 TraesCS4B01G100400 chr2D 80.526 190 26 10 2269 2456 586572608 586572788 6.760000e-28 135.0
30 TraesCS4B01G100400 chr2D 86.408 103 11 2 3506 3608 512141499 512141400 4.100000e-20 110.0
31 TraesCS4B01G100400 chr2D 100.000 31 0 0 324 354 501667059 501667029 1.510000e-04 58.4
32 TraesCS4B01G100400 chr2B 83.917 771 99 10 1001 1768 708183445 708184193 0.000000e+00 713.0
33 TraesCS4B01G100400 chr2B 86.076 395 49 3 1787 2180 708184240 708184629 1.670000e-113 420.0
34 TraesCS4B01G100400 chr2B 83.069 189 20 9 2269 2456 708184656 708184833 1.120000e-35 161.0
35 TraesCS4B01G100400 chr6B 75.638 1215 251 29 1001 2196 50068189 50067001 2.620000e-156 562.0
36 TraesCS4B01G100400 chr6B 73.728 1199 256 46 956 2115 10682666 10683844 7.760000e-112 414.0
37 TraesCS4B01G100400 chr6B 100.000 171 0 0 2575 2745 415732042 415732212 2.250000e-82 316.0
38 TraesCS4B01G100400 chrUn 75.682 1209 237 39 991 2179 137770591 137771762 5.670000e-153 551.0
39 TraesCS4B01G100400 chrUn 83.036 112 14 4 3498 3608 31713245 31713352 3.190000e-16 97.1
40 TraesCS4B01G100400 chr5A 75.748 1204 222 54 1005 2176 657550056 657551221 3.410000e-150 542.0
41 TraesCS4B01G100400 chr5A 86.631 187 23 2 629 813 456897716 456897902 5.080000e-49 206.0
42 TraesCS4B01G100400 chr5A 83.333 108 15 2 3498 3605 688925953 688925849 3.190000e-16 97.1
43 TraesCS4B01G100400 chr5A 100.000 28 0 0 3679 3706 317596745 317596772 7.000000e-03 52.8
44 TraesCS4B01G100400 chr1D 74.898 1231 255 39 1035 2241 355083195 355081995 2.670000e-141 512.0
45 TraesCS4B01G100400 chr1A 73.585 1484 320 51 1009 2447 454526988 454525532 1.610000e-138 503.0
46 TraesCS4B01G100400 chr1A 91.617 167 14 0 648 814 592559186 592559352 8.390000e-57 231.0
47 TraesCS4B01G100400 chr2A 83.747 443 66 6 1785 2224 721505256 721505695 7.760000e-112 414.0
48 TraesCS4B01G100400 chr2A 87.755 98 9 3 3510 3607 761314784 761314690 1.140000e-20 111.0
49 TraesCS4B01G100400 chr7B 99.435 177 1 0 2573 2749 611525305 611525481 4.840000e-84 322.0
50 TraesCS4B01G100400 chr7B 85.714 189 26 1 635 823 618452723 618452536 8.510000e-47 198.0
51 TraesCS4B01G100400 chr1B 99.422 173 0 1 2570 2742 296601339 296601510 2.910000e-81 313.0
52 TraesCS4B01G100400 chr1B 88.439 173 20 0 641 813 619401629 619401457 3.930000e-50 209.0
53 TraesCS4B01G100400 chr7A 97.802 182 1 3 2571 2751 705125947 705125768 1.050000e-80 311.0
54 TraesCS4B01G100400 chr7A 82.883 111 16 2 3498 3608 626954663 626954556 3.190000e-16 97.1
55 TraesCS4B01G100400 chr3A 97.283 184 2 3 2566 2747 33589135 33588953 3.770000e-80 309.0
56 TraesCS4B01G100400 chr6A 76.523 558 107 20 954 1494 4896796 4896246 2.280000e-72 283.0
57 TraesCS4B01G100400 chr6A 87.179 195 17 6 956 1144 5062485 5062677 8.450000e-52 215.0
58 TraesCS4B01G100400 chr3B 89.205 176 18 1 648 823 30684322 30684496 6.530000e-53 219.0
59 TraesCS4B01G100400 chr3B 84.821 112 12 4 3498 3608 260865338 260865445 1.470000e-19 108.0
60 TraesCS4B01G100400 chr3B 83.784 111 12 5 3499 3608 682071325 682071430 2.470000e-17 100.0
61 TraesCS4B01G100400 chr3B 81.102 127 19 4 3483 3608 512871645 512871767 3.190000e-16 97.1
62 TraesCS4B01G100400 chr7D 89.759 166 17 0 648 813 259302627 259302792 3.040000e-51 213.0
63 TraesCS4B01G100400 chr7D 89.759 166 17 0 649 814 461654672 461654837 3.040000e-51 213.0
64 TraesCS4B01G100400 chr7D 89.820 167 13 3 648 813 221590607 221590444 1.090000e-50 211.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G100400 chr4B 106046503 106050383 3880 True 7167.000000 7167 100.000000 1 3881 1 chr4B.!!$R2 3880
1 TraesCS4B01G100400 chr4B 106059123 106060288 1165 True 632.000000 632 76.768000 1005 2179 1 chr4B.!!$R3 1174
2 TraesCS4B01G100400 chr4A 514353111 514355848 2737 False 1376.333333 2558 93.941000 831 3881 3 chr4A.!!$F4 3050
3 TraesCS4B01G100400 chr4A 514341541 514345925 4384 False 558.500000 621 80.137000 2 2189 2 chr4A.!!$F3 2187
4 TraesCS4B01G100400 chr4D 73989093 73997974 8881 True 850.625000 2521 91.218125 2 3881 8 chr4D.!!$R1 3879
5 TraesCS4B01G100400 chr2D 586693200 586694617 1417 False 443.333333 682 85.231667 1001 2449 3 chr2D.!!$F2 1448
6 TraesCS4B01G100400 chr2D 586571373 586572788 1415 False 440.666667 732 83.298667 998 2456 3 chr2D.!!$F1 1458
7 TraesCS4B01G100400 chr2D 586769208 586770457 1249 False 336.500000 486 85.237500 1172 2449 2 chr2D.!!$F3 1277
8 TraesCS4B01G100400 chr2B 708183445 708184833 1388 False 431.333333 713 84.354000 1001 2456 3 chr2B.!!$F1 1455
9 TraesCS4B01G100400 chr6B 50067001 50068189 1188 True 562.000000 562 75.638000 1001 2196 1 chr6B.!!$R1 1195
10 TraesCS4B01G100400 chr6B 10682666 10683844 1178 False 414.000000 414 73.728000 956 2115 1 chr6B.!!$F1 1159
11 TraesCS4B01G100400 chrUn 137770591 137771762 1171 False 551.000000 551 75.682000 991 2179 1 chrUn.!!$F2 1188
12 TraesCS4B01G100400 chr5A 657550056 657551221 1165 False 542.000000 542 75.748000 1005 2176 1 chr5A.!!$F3 1171
13 TraesCS4B01G100400 chr1D 355081995 355083195 1200 True 512.000000 512 74.898000 1035 2241 1 chr1D.!!$R1 1206
14 TraesCS4B01G100400 chr1A 454525532 454526988 1456 True 503.000000 503 73.585000 1009 2447 1 chr1A.!!$R1 1438
15 TraesCS4B01G100400 chr6A 4896246 4896796 550 True 283.000000 283 76.523000 954 1494 1 chr6A.!!$R1 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
573 4279 0.037447 TTGACGGGATGCATGTTCCA 59.963 50.0 2.46 0.0 34.77 3.53 F
658 4364 0.179000 ATTTGCAGCTACTCCCTCCG 59.821 55.0 0.00 0.0 0.00 4.63 F
2617 7301 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.0 0.00 0.0 34.10 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1901 5687 0.907486 CTCCAGCTTGATGACCCTGA 59.093 55.0 0.00 0.0 0.00 3.86 R
2643 7327 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.0 8.73 0.0 40.08 4.58 R
3588 10624 0.038744 AGGTACTCCCTTCGTTCGGA 59.961 55.0 0.00 0.0 42.73 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 3735 8.572828 TTACAAAACGATTCTTGTCTTACGTA 57.427 30.769 0.00 0.00 37.05 3.57
33 3739 5.571784 ACGATTCTTGTCTTACGTATGGA 57.428 39.130 8.45 2.14 32.42 3.41
38 3744 9.027129 CGATTCTTGTCTTACGTATGGATAAAA 57.973 33.333 8.45 6.95 0.00 1.52
42 3748 8.095792 TCTTGTCTTACGTATGGATAAAACCAA 58.904 33.333 8.45 4.00 43.47 3.67
43 3749 7.837202 TGTCTTACGTATGGATAAAACCAAG 57.163 36.000 8.45 0.00 43.47 3.61
47 3753 3.372822 ACGTATGGATAAAACCAAGCACG 59.627 43.478 0.13 0.13 43.47 5.34
62 3768 2.766313 AGCACGCACTTAACTTGATCA 58.234 42.857 0.00 0.00 0.00 2.92
65 3771 4.216257 AGCACGCACTTAACTTGATCAAAT 59.784 37.500 9.88 0.00 0.00 2.32
68 3774 6.074356 GCACGCACTTAACTTGATCAAATTTT 60.074 34.615 7.54 4.86 0.00 1.82
69 3775 7.493313 CACGCACTTAACTTGATCAAATTTTC 58.507 34.615 7.54 0.00 0.00 2.29
86 3792 8.929487 TCAAATTTTCCTAATTTAAGGTGTGGT 58.071 29.630 0.00 0.00 37.91 4.16
106 3812 5.009610 GTGGTAAATTGTGACAAGATGTGGT 59.990 40.000 3.74 0.00 0.00 4.16
108 3814 6.773200 TGGTAAATTGTGACAAGATGTGGTTA 59.227 34.615 3.74 0.00 0.00 2.85
109 3815 7.285629 TGGTAAATTGTGACAAGATGTGGTTAA 59.714 33.333 3.74 0.00 0.00 2.01
254 3960 4.705507 TGAACTGTACTAGTGTCCTCATCC 59.294 45.833 5.39 0.00 40.26 3.51
275 3981 2.435372 TGGATGCCATGACCTTAACC 57.565 50.000 0.00 0.00 0.00 2.85
295 4001 0.928229 GACGTGGTATCGGCATTGAC 59.072 55.000 0.00 0.00 38.86 3.18
307 4013 1.002468 GGCATTGACGATCCAAATCCG 60.002 52.381 0.00 0.00 0.00 4.18
317 4023 4.036971 ACGATCCAAATCCGAAACAAAACA 59.963 37.500 0.00 0.00 0.00 2.83
319 4025 4.993029 TCCAAATCCGAAACAAAACAGT 57.007 36.364 0.00 0.00 0.00 3.55
340 4046 6.103997 CAGTTGGCATGCTTAAAAATCTGAT 58.896 36.000 18.92 0.00 0.00 2.90
343 4049 6.040209 TGGCATGCTTAAAAATCTGATGTT 57.960 33.333 18.92 0.00 0.00 2.71
369 4075 8.672823 AGATTTTTAATGGTCTACCGGATTAC 57.327 34.615 9.46 1.83 39.43 1.89
389 4095 1.602323 GTGACGTGGCCCATTCCAA 60.602 57.895 0.00 0.00 37.96 3.53
437 4143 2.755103 GTGACCCATTCCAATTCCAGAC 59.245 50.000 0.00 0.00 0.00 3.51
455 4161 8.880991 TTCCAGACTAGTGTACTCTATTTTCT 57.119 34.615 0.00 5.44 0.00 2.52
512 4218 6.949352 ATAAAGTCCTCATATGCAACTTGG 57.051 37.500 14.15 0.00 30.95 3.61
545 4251 9.382244 GATGCATTAATATTCGTTAACTTCACC 57.618 33.333 0.00 0.00 0.00 4.02
546 4252 8.500753 TGCATTAATATTCGTTAACTTCACCT 57.499 30.769 3.71 0.00 0.00 4.00
547 4253 8.952278 TGCATTAATATTCGTTAACTTCACCTT 58.048 29.630 3.71 0.00 0.00 3.50
548 4254 9.434559 GCATTAATATTCGTTAACTTCACCTTC 57.565 33.333 3.71 0.00 0.00 3.46
556 4262 9.893305 ATTCGTTAACTTCACCTTCTAAATTTG 57.107 29.630 3.71 0.00 0.00 2.32
557 4263 8.665643 TCGTTAACTTCACCTTCTAAATTTGA 57.334 30.769 3.71 0.00 0.00 2.69
558 4264 8.553696 TCGTTAACTTCACCTTCTAAATTTGAC 58.446 33.333 3.71 0.00 0.00 3.18
559 4265 7.529519 CGTTAACTTCACCTTCTAAATTTGACG 59.470 37.037 3.71 0.00 0.00 4.35
560 4266 5.941948 ACTTCACCTTCTAAATTTGACGG 57.058 39.130 0.00 6.33 0.00 4.79
561 4267 4.760204 ACTTCACCTTCTAAATTTGACGGG 59.240 41.667 0.00 1.16 0.00 5.28
562 4268 4.627284 TCACCTTCTAAATTTGACGGGA 57.373 40.909 0.00 1.98 0.00 5.14
563 4269 5.174037 TCACCTTCTAAATTTGACGGGAT 57.826 39.130 0.00 0.00 0.00 3.85
564 4270 4.941263 TCACCTTCTAAATTTGACGGGATG 59.059 41.667 0.00 0.67 0.00 3.51
565 4271 3.694566 ACCTTCTAAATTTGACGGGATGC 59.305 43.478 0.00 0.00 0.00 3.91
566 4272 3.694072 CCTTCTAAATTTGACGGGATGCA 59.306 43.478 0.00 0.00 0.00 3.96
567 4273 4.339247 CCTTCTAAATTTGACGGGATGCAT 59.661 41.667 0.00 0.00 0.00 3.96
568 4274 4.898829 TCTAAATTTGACGGGATGCATG 57.101 40.909 2.46 0.00 0.00 4.06
569 4275 4.269183 TCTAAATTTGACGGGATGCATGT 58.731 39.130 2.46 0.00 0.00 3.21
570 4276 3.959535 AAATTTGACGGGATGCATGTT 57.040 38.095 2.46 0.00 0.00 2.71
571 4277 3.508744 AATTTGACGGGATGCATGTTC 57.491 42.857 2.46 0.00 0.00 3.18
572 4278 1.173043 TTTGACGGGATGCATGTTCC 58.827 50.000 2.46 0.00 0.00 3.62
573 4279 0.037447 TTGACGGGATGCATGTTCCA 59.963 50.000 2.46 0.00 34.77 3.53
574 4280 0.037447 TGACGGGATGCATGTTCCAA 59.963 50.000 2.46 0.00 34.77 3.53
575 4281 0.451783 GACGGGATGCATGTTCCAAC 59.548 55.000 2.46 0.00 34.77 3.77
576 4282 0.251121 ACGGGATGCATGTTCCAACA 60.251 50.000 2.46 0.00 44.06 3.33
577 4283 0.887247 CGGGATGCATGTTCCAACAA 59.113 50.000 2.46 0.00 43.03 2.83
584 4290 5.277442 GGATGCATGTTCCAACAAAAACTTG 60.277 40.000 2.46 0.00 43.03 3.16
585 4291 4.825422 TGCATGTTCCAACAAAAACTTGA 58.175 34.783 0.00 0.00 43.03 3.02
593 4299 4.898265 TCCAACAAAAACTTGATGGGATGA 59.102 37.500 12.51 0.00 42.85 2.92
603 4309 9.933723 AAAACTTGATGGGATGAAAGAATAAAG 57.066 29.630 0.00 0.00 0.00 1.85
604 4310 7.651027 ACTTGATGGGATGAAAGAATAAAGG 57.349 36.000 0.00 0.00 0.00 3.11
605 4311 7.184862 ACTTGATGGGATGAAAGAATAAAGGT 58.815 34.615 0.00 0.00 0.00 3.50
606 4312 7.340487 ACTTGATGGGATGAAAGAATAAAGGTC 59.660 37.037 0.00 0.00 0.00 3.85
607 4313 6.129179 TGATGGGATGAAAGAATAAAGGTCC 58.871 40.000 0.00 0.00 0.00 4.46
608 4314 5.528600 TGGGATGAAAGAATAAAGGTCCA 57.471 39.130 0.00 0.00 0.00 4.02
609 4315 5.898120 TGGGATGAAAGAATAAAGGTCCAA 58.102 37.500 0.00 0.00 0.00 3.53
610 4316 6.502138 TGGGATGAAAGAATAAAGGTCCAAT 58.498 36.000 0.00 0.00 0.00 3.16
611 4317 6.959366 TGGGATGAAAGAATAAAGGTCCAATT 59.041 34.615 0.00 0.00 0.00 2.32
612 4318 7.093377 TGGGATGAAAGAATAAAGGTCCAATTG 60.093 37.037 0.00 0.00 0.00 2.32
613 4319 7.093333 GGGATGAAAGAATAAAGGTCCAATTGT 60.093 37.037 4.43 0.00 0.00 2.71
614 4320 8.314021 GGATGAAAGAATAAAGGTCCAATTGTT 58.686 33.333 4.43 0.00 0.00 2.83
615 4321 9.710900 GATGAAAGAATAAAGGTCCAATTGTTT 57.289 29.630 4.43 1.03 31.18 2.83
617 4323 9.898152 TGAAAGAATAAAGGTCCAATTGTTTTT 57.102 25.926 4.43 2.47 29.37 1.94
619 4325 9.679661 AAAGAATAAAGGTCCAATTGTTTTTGT 57.320 25.926 4.43 0.00 0.00 2.83
620 4326 9.679661 AAGAATAAAGGTCCAATTGTTTTTGTT 57.320 25.926 4.43 4.31 0.00 2.83
621 4327 9.679661 AGAATAAAGGTCCAATTGTTTTTGTTT 57.320 25.926 4.43 0.00 0.00 2.83
622 4328 9.929722 GAATAAAGGTCCAATTGTTTTTGTTTC 57.070 29.630 4.43 4.65 0.00 2.78
623 4329 9.679661 AATAAAGGTCCAATTGTTTTTGTTTCT 57.320 25.926 4.43 0.00 0.00 2.52
624 4330 7.994425 AAAGGTCCAATTGTTTTTGTTTCTT 57.006 28.000 4.43 0.00 0.00 2.52
625 4331 7.609760 AAGGTCCAATTGTTTTTGTTTCTTC 57.390 32.000 4.43 0.00 0.00 2.87
626 4332 5.810074 AGGTCCAATTGTTTTTGTTTCTTCG 59.190 36.000 4.43 0.00 0.00 3.79
627 4333 5.489335 GTCCAATTGTTTTTGTTTCTTCGC 58.511 37.500 4.43 0.00 0.00 4.70
628 4334 4.266502 TCCAATTGTTTTTGTTTCTTCGCG 59.733 37.500 0.00 0.00 0.00 5.87
629 4335 4.266502 CCAATTGTTTTTGTTTCTTCGCGA 59.733 37.500 3.71 3.71 0.00 5.87
630 4336 5.051106 CCAATTGTTTTTGTTTCTTCGCGAT 60.051 36.000 10.88 0.00 0.00 4.58
631 4337 6.143118 CCAATTGTTTTTGTTTCTTCGCGATA 59.857 34.615 10.88 0.00 0.00 2.92
632 4338 6.911484 ATTGTTTTTGTTTCTTCGCGATAG 57.089 33.333 10.88 10.80 0.00 2.08
633 4339 5.660629 TGTTTTTGTTTCTTCGCGATAGA 57.339 34.783 10.88 13.12 39.76 1.98
634 4340 6.050454 TGTTTTTGTTTCTTCGCGATAGAA 57.950 33.333 21.67 21.67 39.76 2.10
635 4341 6.487960 TGTTTTTGTTTCTTCGCGATAGAAA 58.512 32.000 27.37 27.37 38.82 2.52
636 4342 6.967767 TGTTTTTGTTTCTTCGCGATAGAAAA 59.032 30.769 30.15 22.30 41.72 2.29
637 4343 7.165154 TGTTTTTGTTTCTTCGCGATAGAAAAG 59.835 33.333 30.15 18.21 41.72 2.27
638 4344 6.533819 TTTGTTTCTTCGCGATAGAAAAGA 57.466 33.333 30.15 23.08 41.72 2.52
639 4345 6.533819 TTGTTTCTTCGCGATAGAAAAGAA 57.466 33.333 30.15 23.24 41.72 2.52
640 4346 6.721571 TGTTTCTTCGCGATAGAAAAGAAT 57.278 33.333 30.15 0.00 43.16 2.40
641 4347 7.129109 TGTTTCTTCGCGATAGAAAAGAATT 57.871 32.000 30.15 0.00 43.16 2.17
642 4348 7.581476 TGTTTCTTCGCGATAGAAAAGAATTT 58.419 30.769 30.15 0.00 43.16 1.82
643 4349 7.533900 TGTTTCTTCGCGATAGAAAAGAATTTG 59.466 33.333 30.15 1.36 43.16 2.32
644 4350 5.560148 TCTTCGCGATAGAAAAGAATTTGC 58.440 37.500 10.88 0.00 39.02 3.68
645 4351 4.937696 TCGCGATAGAAAAGAATTTGCA 57.062 36.364 3.71 0.00 39.02 4.08
646 4352 4.897224 TCGCGATAGAAAAGAATTTGCAG 58.103 39.130 3.71 0.00 39.02 4.41
647 4353 3.479949 CGCGATAGAAAAGAATTTGCAGC 59.520 43.478 0.00 0.00 39.02 5.25
648 4354 4.666237 GCGATAGAAAAGAATTTGCAGCT 58.334 39.130 0.00 0.00 39.02 4.24
649 4355 5.502382 CGCGATAGAAAAGAATTTGCAGCTA 60.502 40.000 0.00 0.00 39.02 3.32
650 4356 5.678919 GCGATAGAAAAGAATTTGCAGCTAC 59.321 40.000 0.00 0.00 39.02 3.58
651 4357 6.457528 GCGATAGAAAAGAATTTGCAGCTACT 60.458 38.462 0.00 0.00 39.02 2.57
652 4358 7.122550 CGATAGAAAAGAATTTGCAGCTACTC 58.877 38.462 0.00 0.00 39.02 2.59
653 4359 5.635417 AGAAAAGAATTTGCAGCTACTCC 57.365 39.130 0.00 0.00 39.02 3.85
654 4360 4.460731 AGAAAAGAATTTGCAGCTACTCCC 59.539 41.667 0.00 0.00 39.02 4.30
655 4361 3.728385 AAGAATTTGCAGCTACTCCCT 57.272 42.857 0.00 0.00 0.00 4.20
656 4362 3.274095 AGAATTTGCAGCTACTCCCTC 57.726 47.619 0.00 0.00 0.00 4.30
657 4363 2.092699 AGAATTTGCAGCTACTCCCTCC 60.093 50.000 0.00 0.00 0.00 4.30
658 4364 0.179000 ATTTGCAGCTACTCCCTCCG 59.821 55.000 0.00 0.00 0.00 4.63
659 4365 1.192146 TTTGCAGCTACTCCCTCCGT 61.192 55.000 0.00 0.00 0.00 4.69
660 4366 1.192146 TTGCAGCTACTCCCTCCGTT 61.192 55.000 0.00 0.00 0.00 4.44
661 4367 1.192146 TGCAGCTACTCCCTCCGTTT 61.192 55.000 0.00 0.00 0.00 3.60
662 4368 0.460459 GCAGCTACTCCCTCCGTTTC 60.460 60.000 0.00 0.00 0.00 2.78
663 4369 1.187087 CAGCTACTCCCTCCGTTTCT 58.813 55.000 0.00 0.00 0.00 2.52
664 4370 2.376109 CAGCTACTCCCTCCGTTTCTA 58.624 52.381 0.00 0.00 0.00 2.10
665 4371 2.758979 CAGCTACTCCCTCCGTTTCTAA 59.241 50.000 0.00 0.00 0.00 2.10
666 4372 3.194968 CAGCTACTCCCTCCGTTTCTAAA 59.805 47.826 0.00 0.00 0.00 1.85
667 4373 4.031611 AGCTACTCCCTCCGTTTCTAAAT 58.968 43.478 0.00 0.00 0.00 1.40
668 4374 5.068723 CAGCTACTCCCTCCGTTTCTAAATA 59.931 44.000 0.00 0.00 0.00 1.40
669 4375 5.839606 AGCTACTCCCTCCGTTTCTAAATAT 59.160 40.000 0.00 0.00 0.00 1.28
670 4376 6.326843 AGCTACTCCCTCCGTTTCTAAATATT 59.673 38.462 0.00 0.00 0.00 1.28
671 4377 6.990939 GCTACTCCCTCCGTTTCTAAATATTT 59.009 38.462 5.89 5.89 0.00 1.40
672 4378 7.041984 GCTACTCCCTCCGTTTCTAAATATTTG 60.042 40.741 11.05 1.65 0.00 2.32
673 4379 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
674 4380 7.173032 ACTCCCTCCGTTTCTAAATATTTGTT 58.827 34.615 11.05 0.00 0.00 2.83
675 4381 7.668469 ACTCCCTCCGTTTCTAAATATTTGTTT 59.332 33.333 11.05 0.00 0.00 2.83
676 4382 8.411991 TCCCTCCGTTTCTAAATATTTGTTTT 57.588 30.769 11.05 0.00 0.00 2.43
677 4383 8.862085 TCCCTCCGTTTCTAAATATTTGTTTTT 58.138 29.630 11.05 0.00 0.00 1.94
708 4414 9.273016 AGATTTTAAATGGACTATCACATACGG 57.727 33.333 0.00 0.00 0.00 4.02
709 4415 9.268268 GATTTTAAATGGACTATCACATACGGA 57.732 33.333 0.00 0.00 0.00 4.69
710 4416 9.793259 ATTTTAAATGGACTATCACATACGGAT 57.207 29.630 0.00 0.00 0.00 4.18
711 4417 8.601845 TTTAAATGGACTATCACATACGGATG 57.398 34.615 5.94 5.94 39.16 3.51
713 4419 6.911250 AATGGACTATCACATACGGATGTA 57.089 37.500 14.23 2.61 44.82 2.29
714 4420 7.482169 AATGGACTATCACATACGGATGTAT 57.518 36.000 14.23 10.02 44.82 2.29
715 4421 8.589701 AATGGACTATCACATACGGATGTATA 57.410 34.615 14.23 10.59 44.82 1.47
716 4422 8.768501 ATGGACTATCACATACGGATGTATAT 57.231 34.615 14.23 12.50 44.82 0.86
717 4423 9.862149 ATGGACTATCACATACGGATGTATATA 57.138 33.333 14.23 12.96 44.82 0.86
718 4424 9.689501 TGGACTATCACATACGGATGTATATAA 57.310 33.333 14.23 0.00 44.82 0.98
811 4517 9.074576 AGACAAATATTTAAAAACGGAGGAAGT 57.925 29.630 0.00 0.00 0.00 3.01
814 4520 9.563898 CAAATATTTAAAAACGGAGGAAGTACC 57.436 33.333 0.00 0.00 39.35 3.34
815 4521 8.866970 AATATTTAAAAACGGAGGAAGTACCA 57.133 30.769 0.00 0.00 42.04 3.25
816 4522 9.470399 AATATTTAAAAACGGAGGAAGTACCAT 57.530 29.630 0.00 0.00 42.04 3.55
821 4527 7.585579 AAAAACGGAGGAAGTACCATTTTTA 57.414 32.000 0.00 0.00 42.04 1.52
845 4551 6.856135 AAAACTTCGATTAAAAGAGGTCGT 57.144 33.333 0.00 0.00 35.71 4.34
885 4591 0.803117 CAGCACAGCTCAATCTGGTG 59.197 55.000 0.00 0.00 36.40 4.17
904 4610 0.978907 GGAACCCAACCGACTAGGAA 59.021 55.000 0.00 0.00 45.00 3.36
907 4613 2.019807 ACCCAACCGACTAGGAAAGA 57.980 50.000 0.00 0.00 45.00 2.52
908 4614 2.332117 ACCCAACCGACTAGGAAAGAA 58.668 47.619 0.00 0.00 45.00 2.52
909 4615 2.707257 ACCCAACCGACTAGGAAAGAAA 59.293 45.455 0.00 0.00 45.00 2.52
910 4616 3.136992 ACCCAACCGACTAGGAAAGAAAA 59.863 43.478 0.00 0.00 45.00 2.29
911 4617 4.139038 CCCAACCGACTAGGAAAGAAAAA 58.861 43.478 0.00 0.00 45.00 1.94
927 4633 0.537371 AAAAAGGAGAGGCCGTGTGG 60.537 55.000 0.00 0.00 43.43 4.17
928 4634 1.705997 AAAAGGAGAGGCCGTGTGGT 61.706 55.000 0.00 0.00 43.43 4.16
1503 5238 1.537814 TTGTGGCCACCGACGACTAT 61.538 55.000 32.62 0.00 0.00 2.12
1625 5370 1.202855 AGATGTTCTTGCTGCTGGTGT 60.203 47.619 0.00 0.00 0.00 4.16
1782 5560 1.669502 CCGAACCCGAATGTGTACGAA 60.670 52.381 0.00 0.00 38.22 3.85
1821 5605 1.741028 TGGAGGACAGTTCATTGGGA 58.259 50.000 0.00 0.00 0.00 4.37
1844 5630 0.622665 CCCTGCCTTGAGAACTCCAT 59.377 55.000 0.00 0.00 0.00 3.41
1901 5687 1.660560 GATGCAGAATGGGTGCGCTT 61.661 55.000 9.73 0.00 44.35 4.68
2010 5796 4.208047 GTCATATTCGTGAGCACAGATGTC 59.792 45.833 1.20 0.00 0.00 3.06
2049 5835 4.017126 AGCTAAATTCTGGGCTGGTTAAC 58.983 43.478 0.00 0.00 33.50 2.01
2560 7244 4.157105 TCCGGAGCTTATTTTTGTAAAGCC 59.843 41.667 0.00 0.00 45.32 4.35
2561 7245 4.157840 CCGGAGCTTATTTTTGTAAAGCCT 59.842 41.667 0.00 0.00 45.32 4.58
2562 7246 5.336451 CCGGAGCTTATTTTTGTAAAGCCTT 60.336 40.000 0.00 0.00 45.32 4.35
2563 7247 5.572896 CGGAGCTTATTTTTGTAAAGCCTTG 59.427 40.000 2.85 0.00 45.32 3.61
2564 7248 5.869344 GGAGCTTATTTTTGTAAAGCCTTGG 59.131 40.000 2.85 0.00 45.32 3.61
2565 7249 5.237815 AGCTTATTTTTGTAAAGCCTTGGC 58.762 37.500 2.97 2.97 45.32 4.52
2566 7250 4.994217 GCTTATTTTTGTAAAGCCTTGGCA 59.006 37.500 14.54 0.00 39.74 4.92
2567 7251 5.643348 GCTTATTTTTGTAAAGCCTTGGCAT 59.357 36.000 14.54 0.00 39.74 4.40
2568 7252 6.149308 GCTTATTTTTGTAAAGCCTTGGCATT 59.851 34.615 14.54 10.73 39.74 3.56
2569 7253 7.333174 GCTTATTTTTGTAAAGCCTTGGCATTA 59.667 33.333 14.54 9.68 39.74 1.90
2570 7254 8.770438 TTATTTTTGTAAAGCCTTGGCATTAG 57.230 30.769 14.54 0.00 0.00 1.73
2571 7255 5.799827 TTTTGTAAAGCCTTGGCATTAGT 57.200 34.783 14.54 0.00 0.00 2.24
2572 7256 6.902771 TTTTGTAAAGCCTTGGCATTAGTA 57.097 33.333 14.54 2.53 0.00 1.82
2573 7257 5.890424 TTGTAAAGCCTTGGCATTAGTAC 57.110 39.130 14.54 4.50 0.00 2.73
2574 7258 5.174037 TGTAAAGCCTTGGCATTAGTACT 57.826 39.130 14.54 0.00 0.00 2.73
2575 7259 5.566469 TGTAAAGCCTTGGCATTAGTACTT 58.434 37.500 14.54 0.00 0.00 2.24
2576 7260 5.646360 TGTAAAGCCTTGGCATTAGTACTTC 59.354 40.000 14.54 0.95 0.00 3.01
2577 7261 4.576330 AAGCCTTGGCATTAGTACTTCT 57.424 40.909 14.54 0.00 0.00 2.85
2578 7262 3.878778 AGCCTTGGCATTAGTACTTCTG 58.121 45.455 14.54 0.00 0.00 3.02
2579 7263 3.519510 AGCCTTGGCATTAGTACTTCTGA 59.480 43.478 14.54 0.00 0.00 3.27
2580 7264 3.873952 GCCTTGGCATTAGTACTTCTGAG 59.126 47.826 0.00 0.00 0.00 3.35
2581 7265 4.446371 CCTTGGCATTAGTACTTCTGAGG 58.554 47.826 0.00 0.00 0.00 3.86
2582 7266 4.446371 CTTGGCATTAGTACTTCTGAGGG 58.554 47.826 0.00 0.00 0.00 4.30
2583 7267 2.170607 TGGCATTAGTACTTCTGAGGGC 59.829 50.000 0.00 0.28 38.91 5.19
2584 7268 2.170607 GGCATTAGTACTTCTGAGGGCA 59.829 50.000 0.00 0.00 38.47 5.36
2585 7269 3.462021 GCATTAGTACTTCTGAGGGCAG 58.538 50.000 0.00 0.00 43.67 4.85
2586 7270 3.742640 GCATTAGTACTTCTGAGGGCAGG 60.743 52.174 0.00 0.00 42.53 4.85
2587 7271 1.486211 TAGTACTTCTGAGGGCAGGC 58.514 55.000 0.00 0.00 42.53 4.85
2588 7272 1.222113 GTACTTCTGAGGGCAGGCC 59.778 63.158 4.33 4.33 42.53 5.19
2589 7273 1.081092 TACTTCTGAGGGCAGGCCT 59.919 57.895 17.36 17.36 42.53 5.19
2590 7274 1.267574 TACTTCTGAGGGCAGGCCTG 61.268 60.000 29.34 29.34 42.53 4.85
2591 7275 3.333219 TTCTGAGGGCAGGCCTGG 61.333 66.667 33.46 16.08 42.53 4.45
2604 7288 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
2605 7289 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
2606 7290 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
2607 7291 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
2608 7292 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
2609 7293 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
2610 7294 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
2611 7295 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2612 7296 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
2613 7297 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
2614 7298 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
2615 7299 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
2616 7300 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
2617 7301 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
2618 7302 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
2619 7303 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
2620 7304 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
2621 7305 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
2622 7306 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
2623 7307 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
2624 7308 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
2625 7309 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
2626 7310 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
2627 7311 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
2628 7312 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
2629 7313 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
2630 7314 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
2631 7315 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
2632 7316 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
2633 7317 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
2634 7318 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
2635 7319 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
2636 7320 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
2637 7321 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
2638 7322 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
2639 7323 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
2640 7324 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
2641 7325 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
2652 7336 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
2653 7337 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
2654 7338 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
2655 7339 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
2656 7340 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
2657 7341 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
2658 7342 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
2659 7343 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
2660 7344 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
2661 7345 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
2662 7346 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
2663 7347 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
2664 7348 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
2665 7349 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
2675 7359 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
2676 7360 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
2677 7361 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
2678 7362 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
2679 7363 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
2680 7364 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
2681 7365 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
2682 7366 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
2683 7367 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
2684 7368 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
2685 7369 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
2686 7370 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
2687 7371 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
2688 7372 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
2689 7373 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
2690 7374 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
2691 7375 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
2692 7376 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
2693 7377 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
2694 7378 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
2695 7379 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
2696 7380 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
2697 7381 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
2698 7382 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
2699 7383 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
2700 7384 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
2701 7385 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
2702 7386 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
2703 7387 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
2704 7388 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
2705 7389 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
2706 7390 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
2707 7391 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
2709 7393 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
2710 7394 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2711 7395 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
2712 7396 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
2713 7397 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
2714 7398 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
2715 7399 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
2722 7406 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
2723 7407 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
2724 7408 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
2725 7409 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
2726 7410 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
2727 7411 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
2728 7412 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
2729 7413 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
2730 7414 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
2731 7415 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
2732 7416 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
2733 7417 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
2734 7418 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
2735 7419 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
2736 7420 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
2737 7421 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
2738 7422 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
2739 7423 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
2740 7424 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
2741 7425 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2742 7426 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2743 7427 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
2789 7657 5.846203 AGCAAATCAAACTGTAAATGCTGT 58.154 33.333 0.00 0.00 41.01 4.40
2839 8702 8.910666 TGTTTTTGCATAATATGTTTTCAGACG 58.089 29.630 1.92 0.00 0.00 4.18
2943 8807 5.469760 TGTATGAAGCCACCATCATAAATCG 59.530 40.000 0.00 0.00 39.52 3.34
2952 8816 4.025396 CACCATCATAAATCGACTGCTGTC 60.025 45.833 13.35 13.35 39.70 3.51
2953 8817 4.122046 CCATCATAAATCGACTGCTGTCA 58.878 43.478 21.72 10.56 43.06 3.58
3034 9017 3.014623 ACTGGTGCAAGTCATCATGATG 58.985 45.455 26.79 26.79 34.82 3.07
3091 9074 3.867857 TCGATCGGTCCAAAATTCATCA 58.132 40.909 16.41 0.00 0.00 3.07
3092 9075 4.257731 TCGATCGGTCCAAAATTCATCAA 58.742 39.130 16.41 0.00 0.00 2.57
3113 9097 7.095695 TCAAAAATGGACTAATTCGGATTCC 57.904 36.000 0.00 0.00 0.00 3.01
3202 10238 3.254166 AGCCAACAACAATTCTAGTGCTG 59.746 43.478 0.00 0.00 0.00 4.41
3205 10241 3.788227 ACAACAATTCTAGTGCTGGGA 57.212 42.857 0.00 0.00 0.00 4.37
3248 10284 3.065371 CGGACTAAGGCCATGTTCAAATC 59.935 47.826 5.01 0.00 0.00 2.17
3264 10300 6.183360 TGTTCAAATCATTACAAAACCGACCA 60.183 34.615 0.00 0.00 0.00 4.02
3318 10354 7.572502 AACATCGCAGATTTTTCATTCTTTC 57.427 32.000 0.00 0.00 45.12 2.62
3359 10395 3.255379 GAGCAATCGGACGTCGGC 61.255 66.667 17.55 11.55 39.77 5.54
3431 10467 0.656259 TCTCCACGACGATGATCGAC 59.344 55.000 22.88 14.67 45.13 4.20
3450 10486 0.103208 CTAGACGAAGGGAGCGCAAT 59.897 55.000 11.47 0.00 0.00 3.56
3496 10532 7.144661 TCGCAATTGAAGTTATTTCACACATT 58.855 30.769 10.34 0.00 45.22 2.71
3498 10534 7.326789 CGCAATTGAAGTTATTTCACACATTCT 59.673 33.333 10.34 0.00 45.22 2.40
3499 10535 8.642020 GCAATTGAAGTTATTTCACACATTCTC 58.358 33.333 10.34 0.00 45.22 2.87
3500 10536 9.132521 CAATTGAAGTTATTTCACACATTCTCC 57.867 33.333 0.00 0.00 45.22 3.71
3501 10537 7.815840 TTGAAGTTATTTCACACATTCTCCA 57.184 32.000 0.00 0.00 45.22 3.86
3502 10538 8.408043 TTGAAGTTATTTCACACATTCTCCAT 57.592 30.769 0.00 0.00 45.22 3.41
3503 10539 8.044060 TGAAGTTATTTCACACATTCTCCATC 57.956 34.615 0.00 0.00 40.82 3.51
3504 10540 7.884877 TGAAGTTATTTCACACATTCTCCATCT 59.115 33.333 0.00 0.00 40.82 2.90
3505 10541 7.621428 AGTTATTTCACACATTCTCCATCTG 57.379 36.000 0.00 0.00 0.00 2.90
3506 10542 7.170965 AGTTATTTCACACATTCTCCATCTGT 58.829 34.615 0.00 0.00 0.00 3.41
3507 10543 7.667219 AGTTATTTCACACATTCTCCATCTGTT 59.333 33.333 0.00 0.00 0.00 3.16
3508 10544 6.906157 ATTTCACACATTCTCCATCTGTTT 57.094 33.333 0.00 0.00 0.00 2.83
3509 10545 5.694231 TTCACACATTCTCCATCTGTTTG 57.306 39.130 0.00 0.00 0.00 2.93
3510 10546 4.074259 TCACACATTCTCCATCTGTTTGG 58.926 43.478 0.00 0.00 38.18 3.28
3511 10547 4.074259 CACACATTCTCCATCTGTTTGGA 58.926 43.478 0.00 0.00 43.56 3.53
3512 10548 4.520111 CACACATTCTCCATCTGTTTGGAA 59.480 41.667 4.22 0.00 45.03 3.53
3513 10549 5.184479 CACACATTCTCCATCTGTTTGGAAT 59.816 40.000 4.22 0.00 45.03 3.01
3514 10550 5.776716 ACACATTCTCCATCTGTTTGGAATT 59.223 36.000 4.22 0.00 45.03 2.17
3515 10551 6.947733 ACACATTCTCCATCTGTTTGGAATTA 59.052 34.615 4.22 0.00 45.03 1.40
3516 10552 7.094205 ACACATTCTCCATCTGTTTGGAATTAC 60.094 37.037 4.22 0.00 45.03 1.89
3517 10553 7.121759 CACATTCTCCATCTGTTTGGAATTACT 59.878 37.037 0.00 0.00 45.03 2.24
3518 10554 7.671398 ACATTCTCCATCTGTTTGGAATTACTT 59.329 33.333 0.00 0.00 45.03 2.24
3519 10555 7.452880 TTCTCCATCTGTTTGGAATTACTTG 57.547 36.000 0.00 0.00 45.03 3.16
3520 10556 6.542821 TCTCCATCTGTTTGGAATTACTTGT 58.457 36.000 0.00 0.00 45.03 3.16
3521 10557 7.004086 TCTCCATCTGTTTGGAATTACTTGTT 58.996 34.615 0.00 0.00 45.03 2.83
3522 10558 7.174946 TCTCCATCTGTTTGGAATTACTTGTTC 59.825 37.037 0.00 0.00 45.03 3.18
3523 10559 6.775142 TCCATCTGTTTGGAATTACTTGTTCA 59.225 34.615 0.00 0.00 42.82 3.18
3524 10560 7.286546 TCCATCTGTTTGGAATTACTTGTTCAA 59.713 33.333 0.00 0.00 42.82 2.69
3525 10561 7.596248 CCATCTGTTTGGAATTACTTGTTCAAG 59.404 37.037 10.50 10.50 39.25 3.02
3526 10562 7.873719 TCTGTTTGGAATTACTTGTTCAAGA 57.126 32.000 17.75 0.00 0.00 3.02
3527 10563 8.287439 TCTGTTTGGAATTACTTGTTCAAGAA 57.713 30.769 17.75 8.96 0.00 2.52
3528 10564 8.744652 TCTGTTTGGAATTACTTGTTCAAGAAA 58.255 29.630 17.75 4.85 0.00 2.52
3529 10565 9.533253 CTGTTTGGAATTACTTGTTCAAGAAAT 57.467 29.630 17.75 3.25 0.00 2.17
3530 10566 9.311916 TGTTTGGAATTACTTGTTCAAGAAATG 57.688 29.630 17.75 0.00 0.00 2.32
3531 10567 9.528018 GTTTGGAATTACTTGTTCAAGAAATGA 57.472 29.630 17.75 1.53 35.85 2.57
3576 10612 9.941325 TTTAATTGTAGATGCATCCATTTTTGT 57.059 25.926 23.06 4.58 0.00 2.83
3579 10615 9.941325 AATTGTAGATGCATCCATTTTTGTAAA 57.059 25.926 23.06 0.00 0.00 2.01
3580 10616 8.755696 TTGTAGATGCATCCATTTTTGTAAAC 57.244 30.769 23.06 0.04 0.00 2.01
3581 10617 7.890515 TGTAGATGCATCCATTTTTGTAAACA 58.109 30.769 23.06 2.62 0.00 2.83
3582 10618 8.363390 TGTAGATGCATCCATTTTTGTAAACAA 58.637 29.630 23.06 0.00 0.00 2.83
3583 10619 7.894376 AGATGCATCCATTTTTGTAAACAAG 57.106 32.000 23.06 0.00 37.15 3.16
3584 10620 7.444299 AGATGCATCCATTTTTGTAAACAAGT 58.556 30.769 23.06 0.00 37.15 3.16
3585 10621 8.584157 AGATGCATCCATTTTTGTAAACAAGTA 58.416 29.630 23.06 0.00 37.15 2.24
3586 10622 9.202273 GATGCATCCATTTTTGTAAACAAGTAA 57.798 29.630 16.23 0.00 37.15 2.24
3587 10623 9.723601 ATGCATCCATTTTTGTAAACAAGTAAT 57.276 25.926 0.00 0.00 37.15 1.89
3588 10624 9.553064 TGCATCCATTTTTGTAAACAAGTAATT 57.447 25.926 0.00 0.00 37.15 1.40
3592 10628 8.630917 TCCATTTTTGTAAACAAGTAATTCCGA 58.369 29.630 0.00 0.00 37.15 4.55
3599 10635 5.352643 AAACAAGTAATTCCGAACGAAGG 57.647 39.130 0.00 0.00 32.78 3.46
3867 11380 5.352569 CCCTAAGATAGCAAAACTGACACTG 59.647 44.000 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.560253 AGACAAGAATCGTTTTGTAAGCAT 57.440 33.333 0.00 0.00 37.63 3.79
1 2 6.371809 AAGACAAGAATCGTTTTGTAAGCA 57.628 33.333 0.00 0.00 37.63 3.91
4 5 7.467557 ACGTAAGACAAGAATCGTTTTGTAA 57.532 32.000 0.00 0.00 37.63 2.41
5 6 8.641155 CATACGTAAGACAAGAATCGTTTTGTA 58.359 33.333 0.00 0.00 37.63 2.41
8 3714 6.869913 TCCATACGTAAGACAAGAATCGTTTT 59.130 34.615 0.00 0.00 43.62 2.43
12 3718 8.570096 TTTATCCATACGTAAGACAAGAATCG 57.430 34.615 0.00 0.00 43.62 3.34
29 3735 2.094752 GTGCGTGCTTGGTTTTATCCAT 60.095 45.455 0.00 0.00 37.33 3.41
33 3739 4.277423 AGTTAAGTGCGTGCTTGGTTTTAT 59.723 37.500 4.31 0.00 0.00 1.40
38 3744 1.333619 CAAGTTAAGTGCGTGCTTGGT 59.666 47.619 4.31 0.00 34.58 3.67
42 3748 2.766313 TGATCAAGTTAAGTGCGTGCT 58.234 42.857 0.00 0.00 0.00 4.40
43 3749 3.536158 TTGATCAAGTTAAGTGCGTGC 57.464 42.857 3.38 0.00 0.00 5.34
47 3753 9.691362 TTAGGAAAATTTGATCAAGTTAAGTGC 57.309 29.630 15.64 9.94 0.00 4.40
68 3774 8.798402 CACAATTTACCACACCTTAAATTAGGA 58.202 33.333 1.07 0.00 36.28 2.94
69 3775 8.798402 TCACAATTTACCACACCTTAAATTAGG 58.202 33.333 0.00 0.00 36.28 2.69
77 3783 5.197451 TCTTGTCACAATTTACCACACCTT 58.803 37.500 0.00 0.00 0.00 3.50
84 3790 5.705609 ACCACATCTTGTCACAATTTACC 57.294 39.130 0.00 0.00 0.00 2.85
86 3792 8.684386 TCTTAACCACATCTTGTCACAATTTA 57.316 30.769 0.00 0.00 0.00 1.40
106 3812 0.185416 TGGGGCCGTTTGGTTCTTAA 59.815 50.000 0.00 0.00 37.67 1.85
108 3814 1.530655 CTGGGGCCGTTTGGTTCTT 60.531 57.895 0.00 0.00 37.67 2.52
109 3815 2.115266 CTGGGGCCGTTTGGTTCT 59.885 61.111 0.00 0.00 37.67 3.01
254 3960 2.689983 GGTTAAGGTCATGGCATCCAAG 59.310 50.000 0.00 0.00 36.95 3.61
275 3981 0.526739 TCAATGCCGATACCACGTCG 60.527 55.000 0.00 0.00 38.75 5.12
283 3989 2.900716 TTGGATCGTCAATGCCGATA 57.099 45.000 0.00 0.00 44.48 2.92
288 3994 1.939934 TCGGATTTGGATCGTCAATGC 59.060 47.619 0.00 0.00 32.84 3.56
295 4001 4.541779 TGTTTTGTTTCGGATTTGGATCG 58.458 39.130 0.00 0.00 32.84 3.69
307 4013 3.197265 AGCATGCCAACTGTTTTGTTTC 58.803 40.909 15.66 0.00 0.00 2.78
317 4023 5.726980 TCAGATTTTTAAGCATGCCAACT 57.273 34.783 15.66 0.00 0.00 3.16
319 4025 6.040209 ACATCAGATTTTTAAGCATGCCAA 57.960 33.333 15.66 6.11 0.00 4.52
340 4046 7.622713 TCCGGTAGACCATTAAAAATCTAACA 58.377 34.615 0.00 0.00 31.94 2.41
343 4049 9.768662 GTAATCCGGTAGACCATTAAAAATCTA 57.231 33.333 0.00 0.00 35.14 1.98
369 4075 3.124921 GAATGGGCCACGTCACCG 61.125 66.667 9.28 0.00 40.83 4.94
379 4085 0.451783 CACGCTAGTTTGGAATGGGC 59.548 55.000 0.00 0.00 0.00 5.36
389 4095 1.390565 AGCCGACTATCACGCTAGTT 58.609 50.000 0.00 0.00 32.11 2.24
455 4161 7.926555 GGTGCTTTATTACTGCTCAGATTAGTA 59.073 37.037 3.60 0.00 0.00 1.82
531 4237 9.111613 TCAAATTTAGAAGGTGAAGTTAACGAA 57.888 29.630 0.00 0.00 0.00 3.85
540 4246 4.975631 TCCCGTCAAATTTAGAAGGTGAA 58.024 39.130 15.66 4.84 33.49 3.18
541 4247 4.627284 TCCCGTCAAATTTAGAAGGTGA 57.373 40.909 15.66 11.74 33.49 4.02
542 4248 4.438744 GCATCCCGTCAAATTTAGAAGGTG 60.439 45.833 15.66 11.61 33.49 4.00
543 4249 3.694566 GCATCCCGTCAAATTTAGAAGGT 59.305 43.478 15.66 2.93 33.49 3.50
545 4251 4.963276 TGCATCCCGTCAAATTTAGAAG 57.037 40.909 0.00 0.00 0.00 2.85
546 4252 4.704540 ACATGCATCCCGTCAAATTTAGAA 59.295 37.500 0.00 0.00 0.00 2.10
547 4253 4.269183 ACATGCATCCCGTCAAATTTAGA 58.731 39.130 0.00 0.00 0.00 2.10
548 4254 4.637483 ACATGCATCCCGTCAAATTTAG 57.363 40.909 0.00 0.00 0.00 1.85
549 4255 4.142271 GGAACATGCATCCCGTCAAATTTA 60.142 41.667 0.00 0.00 0.00 1.40
550 4256 3.368323 GGAACATGCATCCCGTCAAATTT 60.368 43.478 0.00 0.00 0.00 1.82
551 4257 2.166254 GGAACATGCATCCCGTCAAATT 59.834 45.455 0.00 0.00 0.00 1.82
552 4258 1.750778 GGAACATGCATCCCGTCAAAT 59.249 47.619 0.00 0.00 0.00 2.32
553 4259 1.173043 GGAACATGCATCCCGTCAAA 58.827 50.000 0.00 0.00 0.00 2.69
554 4260 0.037447 TGGAACATGCATCCCGTCAA 59.963 50.000 13.92 0.00 36.04 3.18
555 4261 0.037447 TTGGAACATGCATCCCGTCA 59.963 50.000 13.92 0.00 39.30 4.35
556 4262 0.451783 GTTGGAACATGCATCCCGTC 59.548 55.000 13.92 0.00 39.30 4.79
557 4263 0.251121 TGTTGGAACATGCATCCCGT 60.251 50.000 13.92 0.00 39.30 5.28
558 4264 0.887247 TTGTTGGAACATGCATCCCG 59.113 50.000 13.92 0.00 39.30 5.14
559 4265 3.399440 TTTTGTTGGAACATGCATCCC 57.601 42.857 13.92 0.00 39.30 3.85
560 4266 4.379652 AGTTTTTGTTGGAACATGCATCC 58.620 39.130 10.50 10.50 39.30 3.51
561 4267 5.523188 TCAAGTTTTTGTTGGAACATGCATC 59.477 36.000 0.00 0.00 38.95 3.91
562 4268 5.426504 TCAAGTTTTTGTTGGAACATGCAT 58.573 33.333 0.00 0.00 38.95 3.96
563 4269 4.825422 TCAAGTTTTTGTTGGAACATGCA 58.175 34.783 0.00 0.00 38.95 3.96
564 4270 5.740406 CATCAAGTTTTTGTTGGAACATGC 58.260 37.500 0.00 0.00 38.95 4.06
571 4277 5.212532 TCATCCCATCAAGTTTTTGTTGG 57.787 39.130 9.40 9.40 46.70 3.77
572 4278 6.985645 TCTTTCATCCCATCAAGTTTTTGTTG 59.014 34.615 0.00 0.00 35.73 3.33
573 4279 7.123355 TCTTTCATCCCATCAAGTTTTTGTT 57.877 32.000 0.00 0.00 35.73 2.83
574 4280 6.729690 TCTTTCATCCCATCAAGTTTTTGT 57.270 33.333 0.00 0.00 35.73 2.83
575 4281 9.709495 TTATTCTTTCATCCCATCAAGTTTTTG 57.291 29.630 0.00 0.00 35.57 2.44
577 4283 9.933723 CTTTATTCTTTCATCCCATCAAGTTTT 57.066 29.630 0.00 0.00 0.00 2.43
584 4290 6.129179 TGGACCTTTATTCTTTCATCCCATC 58.871 40.000 0.00 0.00 0.00 3.51
585 4291 6.091076 TGGACCTTTATTCTTTCATCCCAT 57.909 37.500 0.00 0.00 0.00 4.00
593 4299 9.679661 ACAAAAACAATTGGACCTTTATTCTTT 57.320 25.926 10.83 0.00 34.56 2.52
602 4308 5.810074 CGAAGAAACAAAAACAATTGGACCT 59.190 36.000 10.83 0.00 34.56 3.85
603 4309 5.501736 GCGAAGAAACAAAAACAATTGGACC 60.502 40.000 10.83 0.00 34.56 4.46
604 4310 5.489335 GCGAAGAAACAAAAACAATTGGAC 58.511 37.500 10.83 0.00 34.56 4.02
605 4311 4.266502 CGCGAAGAAACAAAAACAATTGGA 59.733 37.500 10.83 0.00 34.56 3.53
606 4312 4.266502 TCGCGAAGAAACAAAAACAATTGG 59.733 37.500 6.20 0.00 34.56 3.16
607 4313 5.368552 TCGCGAAGAAACAAAAACAATTG 57.631 34.783 6.20 3.24 36.37 2.32
608 4314 7.136119 TCTATCGCGAAGAAACAAAAACAATT 58.864 30.769 15.24 0.00 0.00 2.32
609 4315 6.664515 TCTATCGCGAAGAAACAAAAACAAT 58.335 32.000 15.24 0.00 0.00 2.71
610 4316 6.050454 TCTATCGCGAAGAAACAAAAACAA 57.950 33.333 15.24 0.00 0.00 2.83
611 4317 5.660629 TCTATCGCGAAGAAACAAAAACA 57.339 34.783 15.24 0.00 0.00 2.83
612 4318 6.963017 TTTCTATCGCGAAGAAACAAAAAC 57.037 33.333 27.37 0.00 37.89 2.43
613 4319 7.411274 TCTTTTCTATCGCGAAGAAACAAAAA 58.589 30.769 29.27 20.05 41.43 1.94
614 4320 6.950545 TCTTTTCTATCGCGAAGAAACAAAA 58.049 32.000 29.27 20.28 41.43 2.44
615 4321 6.533819 TCTTTTCTATCGCGAAGAAACAAA 57.466 33.333 29.27 20.50 41.43 2.83
616 4322 6.533819 TTCTTTTCTATCGCGAAGAAACAA 57.466 33.333 29.27 24.07 41.43 2.83
617 4323 6.721571 ATTCTTTTCTATCGCGAAGAAACA 57.278 33.333 29.27 21.46 41.43 2.83
618 4324 7.460249 GCAAATTCTTTTCTATCGCGAAGAAAC 60.460 37.037 29.27 18.86 41.43 2.78
619 4325 6.523201 GCAAATTCTTTTCTATCGCGAAGAAA 59.477 34.615 27.37 27.37 40.34 2.52
620 4326 6.021596 GCAAATTCTTTTCTATCGCGAAGAA 58.978 36.000 15.24 19.60 40.96 2.52
621 4327 5.121611 TGCAAATTCTTTTCTATCGCGAAGA 59.878 36.000 15.24 14.64 0.00 2.87
622 4328 5.323900 TGCAAATTCTTTTCTATCGCGAAG 58.676 37.500 15.24 12.37 0.00 3.79
623 4329 5.289917 TGCAAATTCTTTTCTATCGCGAA 57.710 34.783 15.24 1.32 0.00 4.70
624 4330 4.727734 GCTGCAAATTCTTTTCTATCGCGA 60.728 41.667 13.09 13.09 0.00 5.87
625 4331 3.479949 GCTGCAAATTCTTTTCTATCGCG 59.520 43.478 0.00 0.00 0.00 5.87
626 4332 4.666237 AGCTGCAAATTCTTTTCTATCGC 58.334 39.130 1.02 0.00 0.00 4.58
627 4333 7.009568 AGTAGCTGCAAATTCTTTTCTATCG 57.990 36.000 4.12 0.00 0.00 2.92
628 4334 7.413644 GGAGTAGCTGCAAATTCTTTTCTATC 58.586 38.462 4.12 0.00 0.00 2.08
629 4335 6.319911 GGGAGTAGCTGCAAATTCTTTTCTAT 59.680 38.462 4.12 0.00 0.00 1.98
630 4336 5.648092 GGGAGTAGCTGCAAATTCTTTTCTA 59.352 40.000 4.12 0.00 0.00 2.10
631 4337 4.460731 GGGAGTAGCTGCAAATTCTTTTCT 59.539 41.667 4.12 0.00 0.00 2.52
632 4338 4.460731 AGGGAGTAGCTGCAAATTCTTTTC 59.539 41.667 4.12 0.00 0.00 2.29
633 4339 4.411013 AGGGAGTAGCTGCAAATTCTTTT 58.589 39.130 4.12 0.00 0.00 2.27
634 4340 4.013050 GAGGGAGTAGCTGCAAATTCTTT 58.987 43.478 4.12 0.00 0.00 2.52
635 4341 3.615155 GAGGGAGTAGCTGCAAATTCTT 58.385 45.455 4.12 0.00 0.00 2.52
636 4342 2.092699 GGAGGGAGTAGCTGCAAATTCT 60.093 50.000 4.12 0.00 0.00 2.40
637 4343 2.293170 GGAGGGAGTAGCTGCAAATTC 58.707 52.381 4.12 0.00 0.00 2.17
638 4344 1.407437 CGGAGGGAGTAGCTGCAAATT 60.407 52.381 4.12 0.00 0.00 1.82
639 4345 0.179000 CGGAGGGAGTAGCTGCAAAT 59.821 55.000 4.12 0.00 0.00 2.32
640 4346 1.192146 ACGGAGGGAGTAGCTGCAAA 61.192 55.000 4.12 0.00 0.00 3.68
641 4347 1.192146 AACGGAGGGAGTAGCTGCAA 61.192 55.000 4.12 0.00 0.00 4.08
642 4348 1.192146 AAACGGAGGGAGTAGCTGCA 61.192 55.000 4.12 0.00 0.00 4.41
643 4349 0.460459 GAAACGGAGGGAGTAGCTGC 60.460 60.000 0.00 0.00 0.00 5.25
644 4350 1.187087 AGAAACGGAGGGAGTAGCTG 58.813 55.000 0.00 0.00 0.00 4.24
645 4351 2.822707 TAGAAACGGAGGGAGTAGCT 57.177 50.000 0.00 0.00 0.00 3.32
646 4352 3.881937 TTTAGAAACGGAGGGAGTAGC 57.118 47.619 0.00 0.00 0.00 3.58
647 4353 7.985752 ACAAATATTTAGAAACGGAGGGAGTAG 59.014 37.037 0.00 0.00 0.00 2.57
648 4354 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
649 4355 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
650 4356 7.625828 AACAAATATTTAGAAACGGAGGGAG 57.374 36.000 0.00 0.00 0.00 4.30
651 4357 8.411991 AAAACAAATATTTAGAAACGGAGGGA 57.588 30.769 0.00 0.00 0.00 4.20
682 4388 9.273016 CCGTATGTGATAGTCCATTTAAAATCT 57.727 33.333 0.00 0.00 0.00 2.40
683 4389 9.268268 TCCGTATGTGATAGTCCATTTAAAATC 57.732 33.333 0.00 0.00 0.00 2.17
684 4390 9.793259 ATCCGTATGTGATAGTCCATTTAAAAT 57.207 29.630 0.00 0.00 0.00 1.82
685 4391 9.051679 CATCCGTATGTGATAGTCCATTTAAAA 57.948 33.333 0.00 0.00 0.00 1.52
686 4392 8.208224 ACATCCGTATGTGATAGTCCATTTAAA 58.792 33.333 0.00 0.00 44.79 1.52
687 4393 7.732025 ACATCCGTATGTGATAGTCCATTTAA 58.268 34.615 0.00 0.00 44.79 1.52
688 4394 7.297936 ACATCCGTATGTGATAGTCCATTTA 57.702 36.000 0.00 0.00 44.79 1.40
689 4395 6.174720 ACATCCGTATGTGATAGTCCATTT 57.825 37.500 0.00 0.00 44.79 2.32
690 4396 5.808366 ACATCCGTATGTGATAGTCCATT 57.192 39.130 0.00 0.00 44.79 3.16
691 4397 8.768501 ATATACATCCGTATGTGATAGTCCAT 57.231 34.615 3.56 0.00 45.99 3.41
692 4398 9.689501 TTATATACATCCGTATGTGATAGTCCA 57.310 33.333 3.56 0.00 45.99 4.02
785 4491 9.074576 ACTTCCTCCGTTTTTAAATATTTGTCT 57.925 29.630 11.05 0.00 0.00 3.41
788 4494 9.563898 GGTACTTCCTCCGTTTTTAAATATTTG 57.436 33.333 11.05 0.00 0.00 2.32
789 4495 9.299465 TGGTACTTCCTCCGTTTTTAAATATTT 57.701 29.630 5.89 5.89 37.07 1.40
790 4496 8.866970 TGGTACTTCCTCCGTTTTTAAATATT 57.133 30.769 0.00 0.00 37.07 1.28
791 4497 9.470399 AATGGTACTTCCTCCGTTTTTAAATAT 57.530 29.630 0.00 0.00 37.07 1.28
792 4498 8.866970 AATGGTACTTCCTCCGTTTTTAAATA 57.133 30.769 0.00 0.00 37.07 1.40
793 4499 7.770366 AATGGTACTTCCTCCGTTTTTAAAT 57.230 32.000 0.00 0.00 37.07 1.40
794 4500 7.585579 AAATGGTACTTCCTCCGTTTTTAAA 57.414 32.000 0.00 0.00 39.10 1.52
795 4501 7.585579 AAAATGGTACTTCCTCCGTTTTTAA 57.414 32.000 7.91 0.00 45.06 1.52
799 4505 7.585579 TTTAAAAATGGTACTTCCTCCGTTT 57.414 32.000 0.00 0.00 42.48 3.60
800 4506 7.585579 TTTTAAAAATGGTACTTCCTCCGTT 57.414 32.000 0.00 0.00 37.07 4.44
801 4507 7.286087 AGTTTTTAAAAATGGTACTTCCTCCGT 59.714 33.333 16.02 0.00 37.07 4.69
802 4508 7.654568 AGTTTTTAAAAATGGTACTTCCTCCG 58.345 34.615 16.02 0.00 37.07 4.63
803 4509 9.472361 GAAGTTTTTAAAAATGGTACTTCCTCC 57.528 33.333 21.42 6.96 37.07 4.30
804 4510 9.177304 CGAAGTTTTTAAAAATGGTACTTCCTC 57.823 33.333 23.80 10.77 37.07 3.71
805 4511 8.905850 TCGAAGTTTTTAAAAATGGTACTTCCT 58.094 29.630 23.80 10.79 37.07 3.36
806 4512 9.687210 ATCGAAGTTTTTAAAAATGGTACTTCC 57.313 29.630 23.80 13.75 29.40 3.46
821 4527 7.130269 CACGACCTCTTTTAATCGAAGTTTTT 58.870 34.615 1.20 0.00 37.97 1.94
885 4591 0.978907 TTCCTAGTCGGTTGGGTTCC 59.021 55.000 0.00 0.00 0.00 3.62
908 4614 0.537371 CCACACGGCCTCTCCTTTTT 60.537 55.000 0.00 0.00 0.00 1.94
909 4615 1.073199 CCACACGGCCTCTCCTTTT 59.927 57.895 0.00 0.00 0.00 2.27
910 4616 2.147387 ACCACACGGCCTCTCCTTT 61.147 57.895 0.00 0.00 34.57 3.11
911 4617 2.526873 ACCACACGGCCTCTCCTT 60.527 61.111 0.00 0.00 34.57 3.36
912 4618 3.314331 CACCACACGGCCTCTCCT 61.314 66.667 0.00 0.00 34.57 3.69
913 4619 3.626924 ACACCACACGGCCTCTCC 61.627 66.667 0.00 0.00 34.57 3.71
914 4620 2.357517 CACACCACACGGCCTCTC 60.358 66.667 0.00 0.00 34.57 3.20
915 4621 4.626081 GCACACCACACGGCCTCT 62.626 66.667 0.00 0.00 34.57 3.69
947 4653 2.387445 TTTCGGATTGGTGCGCGAG 61.387 57.895 12.10 0.00 39.22 5.03
1503 5238 1.506718 CGCCTTGACTAGCTCGTCA 59.493 57.895 16.51 16.51 41.82 4.35
1557 5292 1.270305 CCATCGTCAAGTGTCACTGGT 60.270 52.381 6.18 0.00 0.00 4.00
1821 5605 2.291217 GGAGTTCTCAAGGCAGGGAAAT 60.291 50.000 2.24 0.00 0.00 2.17
1844 5630 5.548056 ACCTTCCTTGAGAACAGATAAAGGA 59.452 40.000 4.45 0.00 43.56 3.36
1901 5687 0.907486 CTCCAGCTTGATGACCCTGA 59.093 55.000 0.00 0.00 0.00 3.86
2010 5796 5.484173 TTAGCTTGATTGTGAATAAGCCG 57.516 39.130 0.00 0.00 44.90 5.52
2516 7200 1.202794 TGTGAGCTTCAGACATGCCAA 60.203 47.619 0.00 0.00 0.00 4.52
2560 7244 4.446371 CCCTCAGAAGTACTAATGCCAAG 58.554 47.826 0.00 0.00 0.00 3.61
2561 7245 3.370527 GCCCTCAGAAGTACTAATGCCAA 60.371 47.826 0.00 0.00 0.00 4.52
2562 7246 2.170607 GCCCTCAGAAGTACTAATGCCA 59.829 50.000 0.00 0.00 0.00 4.92
2563 7247 2.170607 TGCCCTCAGAAGTACTAATGCC 59.829 50.000 0.00 0.00 0.00 4.40
2564 7248 3.462021 CTGCCCTCAGAAGTACTAATGC 58.538 50.000 0.00 0.00 42.95 3.56
2565 7249 3.742640 GCCTGCCCTCAGAAGTACTAATG 60.743 52.174 0.00 0.00 42.95 1.90
2566 7250 2.436173 GCCTGCCCTCAGAAGTACTAAT 59.564 50.000 0.00 0.00 42.95 1.73
2567 7251 1.831736 GCCTGCCCTCAGAAGTACTAA 59.168 52.381 0.00 0.00 42.95 2.24
2568 7252 1.486211 GCCTGCCCTCAGAAGTACTA 58.514 55.000 0.00 0.00 42.95 1.82
2569 7253 1.268283 GGCCTGCCCTCAGAAGTACT 61.268 60.000 0.00 0.00 42.95 2.73
2570 7254 1.222113 GGCCTGCCCTCAGAAGTAC 59.778 63.158 0.00 0.00 42.95 2.73
2571 7255 1.081092 AGGCCTGCCCTCAGAAGTA 59.919 57.895 3.11 0.00 41.21 2.24
2572 7256 2.204059 AGGCCTGCCCTCAGAAGT 60.204 61.111 3.11 0.00 41.21 3.01
2573 7257 2.271497 CAGGCCTGCCCTCAGAAG 59.729 66.667 22.33 0.00 44.09 2.85
2574 7258 3.333219 CCAGGCCTGCCCTCAGAA 61.333 66.667 28.39 0.00 44.09 3.02
2587 7271 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
2588 7272 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
2589 7273 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
2590 7274 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
2591 7275 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
2592 7276 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
2593 7277 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
2599 7283 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
2600 7284 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
2601 7285 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
2602 7286 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
2603 7287 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
2604 7288 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
2605 7289 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
2616 7300 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
2617 7301 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
2618 7302 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
2619 7303 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
2620 7304 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
2621 7305 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
2622 7306 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
2623 7307 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
2624 7308 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
2625 7309 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
2634 7318 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
2635 7319 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
2636 7320 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
2637 7321 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
2638 7322 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
2639 7323 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
2640 7324 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
2641 7325 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
2643 7327 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
2644 7328 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
2645 7329 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
2646 7330 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
2657 7341 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
2658 7342 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
2659 7343 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
2660 7344 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
2661 7345 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
2662 7346 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
2663 7347 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
2664 7348 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
2665 7349 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
2666 7350 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
2667 7351 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
2668 7352 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
2669 7353 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
2670 7354 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
2671 7355 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
2672 7356 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
2673 7357 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
2674 7358 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
2675 7359 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
2676 7360 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
2677 7361 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
2678 7362 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
2679 7363 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
2680 7364 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
2681 7365 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
2682 7366 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
2683 7367 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
2684 7368 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
2685 7369 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
2686 7370 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
2687 7371 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
2688 7372 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
2689 7373 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2690 7374 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2692 7376 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
2693 7377 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2694 7378 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
2695 7379 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
2696 7380 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
2697 7381 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
2698 7382 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
2706 7390 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
2707 7391 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
2708 7392 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
2709 7393 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
2710 7394 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
2711 7395 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
2712 7396 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
2713 7397 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
2714 7398 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
2715 7399 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
2716 7400 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
2717 7401 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
2718 7402 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
2719 7403 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
2720 7404 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
2721 7405 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
2722 7406 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
2723 7407 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
2724 7408 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
2725 7409 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
2726 7410 0.550914 AAAAGGACAGACCCAGTGCA 59.449 50.000 0.00 0.00 40.05 4.57
2727 7411 1.338020 CAAAAAGGACAGACCCAGTGC 59.662 52.381 0.00 0.00 40.05 4.40
2728 7412 1.956477 CCAAAAAGGACAGACCCAGTG 59.044 52.381 0.00 0.00 41.22 3.66
2729 7413 1.754201 GCCAAAAAGGACAGACCCAGT 60.754 52.381 0.00 0.00 41.22 4.00
2730 7414 0.961753 GCCAAAAAGGACAGACCCAG 59.038 55.000 0.00 0.00 41.22 4.45
2731 7415 0.260230 TGCCAAAAAGGACAGACCCA 59.740 50.000 0.00 0.00 41.22 4.51
2732 7416 1.632589 ATGCCAAAAAGGACAGACCC 58.367 50.000 0.00 0.00 41.22 4.46
2733 7417 3.826729 ACTAATGCCAAAAAGGACAGACC 59.173 43.478 0.00 0.00 41.22 3.85
2734 7418 5.705905 AGTACTAATGCCAAAAAGGACAGAC 59.294 40.000 0.00 0.00 41.22 3.51
2735 7419 5.876357 AGTACTAATGCCAAAAAGGACAGA 58.124 37.500 0.00 0.00 41.22 3.41
2736 7420 6.431234 AGAAGTACTAATGCCAAAAAGGACAG 59.569 38.462 0.00 0.00 41.22 3.51
2737 7421 6.303839 AGAAGTACTAATGCCAAAAAGGACA 58.696 36.000 0.00 0.00 41.22 4.02
2738 7422 6.819397 AGAAGTACTAATGCCAAAAAGGAC 57.181 37.500 0.00 0.00 41.22 3.85
2839 8702 4.090642 CGCTAGCGATGAAAATCTACCATC 59.909 45.833 32.98 0.00 42.83 3.51
2943 8807 0.516439 GCAAGAAGCTGACAGCAGTC 59.484 55.000 28.43 22.97 45.56 3.51
2952 8816 2.001159 CAGTAGCTCTGCAAGAAGCTG 58.999 52.381 21.84 8.30 46.34 4.24
2953 8817 2.383368 CAGTAGCTCTGCAAGAAGCT 57.617 50.000 18.55 18.55 46.34 3.74
2994 8976 4.929808 CCAGTCGTGCTTTAACTACTCAAT 59.070 41.667 0.00 0.00 0.00 2.57
3034 9017 6.749923 AGACAAGATTTGCATCCTTAGTTC 57.250 37.500 0.00 0.00 0.00 3.01
3091 9074 7.178451 ACTTGGAATCCGAATTAGTCCATTTTT 59.822 33.333 0.00 0.00 0.00 1.94
3092 9075 6.663523 ACTTGGAATCCGAATTAGTCCATTTT 59.336 34.615 0.00 0.00 0.00 1.82
3205 10241 1.568504 TCGGCTACTCTGGGTTCAAT 58.431 50.000 0.00 0.00 0.00 2.57
3248 10284 7.223777 AGTTTTGATTTGGTCGGTTTTGTAATG 59.776 33.333 0.00 0.00 0.00 1.90
3431 10467 0.103208 ATTGCGCTCCCTTCGTCTAG 59.897 55.000 9.73 0.00 0.00 2.43
3450 10486 0.673437 TCGGCACATCAGCATCGATA 59.327 50.000 0.00 0.00 35.83 2.92
3499 10535 6.980593 TGAACAAGTAATTCCAAACAGATGG 58.019 36.000 0.00 0.00 42.12 3.51
3500 10536 8.352201 TCTTGAACAAGTAATTCCAAACAGATG 58.648 33.333 13.15 0.00 39.38 2.90
3501 10537 8.463930 TCTTGAACAAGTAATTCCAAACAGAT 57.536 30.769 13.15 0.00 39.38 2.90
3502 10538 7.873719 TCTTGAACAAGTAATTCCAAACAGA 57.126 32.000 13.15 0.00 39.38 3.41
3503 10539 8.925161 TTTCTTGAACAAGTAATTCCAAACAG 57.075 30.769 13.15 0.00 39.38 3.16
3504 10540 9.311916 CATTTCTTGAACAAGTAATTCCAAACA 57.688 29.630 13.75 0.00 36.64 2.83
3505 10541 9.528018 TCATTTCTTGAACAAGTAATTCCAAAC 57.472 29.630 13.75 0.00 36.64 2.93
3508 10544 9.695526 CATTCATTTCTTGAACAAGTAATTCCA 57.304 29.630 13.75 5.07 46.80 3.53
3509 10545 9.696917 ACATTCATTTCTTGAACAAGTAATTCC 57.303 29.630 13.75 0.00 46.80 3.01
3515 10551 9.071276 AGATGTACATTCATTTCTTGAACAAGT 57.929 29.630 10.30 0.00 46.80 3.16
3518 10554 9.942850 TCTAGATGTACATTCATTTCTTGAACA 57.057 29.630 10.30 0.00 46.80 3.18
3550 10586 9.941325 ACAAAAATGGATGCATCTACAATTAAA 57.059 25.926 25.28 2.12 0.00 1.52
3553 10589 9.941325 TTTACAAAAATGGATGCATCTACAATT 57.059 25.926 25.28 16.30 0.00 2.32
3554 10590 9.369904 GTTTACAAAAATGGATGCATCTACAAT 57.630 29.630 25.28 11.76 0.00 2.71
3555 10591 8.363390 TGTTTACAAAAATGGATGCATCTACAA 58.637 29.630 25.28 10.04 0.00 2.41
3556 10592 7.890515 TGTTTACAAAAATGGATGCATCTACA 58.109 30.769 25.28 16.33 0.00 2.74
3557 10593 8.755696 TTGTTTACAAAAATGGATGCATCTAC 57.244 30.769 25.28 11.04 32.11 2.59
3558 10594 8.584157 ACTTGTTTACAAAAATGGATGCATCTA 58.416 29.630 25.28 20.79 35.15 1.98
3559 10595 7.444299 ACTTGTTTACAAAAATGGATGCATCT 58.556 30.769 25.28 4.53 35.15 2.90
3560 10596 7.656707 ACTTGTTTACAAAAATGGATGCATC 57.343 32.000 18.81 18.81 35.15 3.91
3561 10597 9.723601 ATTACTTGTTTACAAAAATGGATGCAT 57.276 25.926 0.00 0.00 35.15 3.96
3562 10598 9.553064 AATTACTTGTTTACAAAAATGGATGCA 57.447 25.926 0.00 0.00 35.15 3.96
3565 10601 9.418045 CGGAATTACTTGTTTACAAAAATGGAT 57.582 29.630 0.00 0.00 35.15 3.41
3566 10602 8.630917 TCGGAATTACTTGTTTACAAAAATGGA 58.369 29.630 0.00 0.00 35.15 3.41
3567 10603 8.804688 TCGGAATTACTTGTTTACAAAAATGG 57.195 30.769 0.00 0.00 35.15 3.16
3569 10605 8.960075 CGTTCGGAATTACTTGTTTACAAAAAT 58.040 29.630 0.00 0.00 35.15 1.82
3570 10606 8.180267 TCGTTCGGAATTACTTGTTTACAAAAA 58.820 29.630 0.00 0.00 35.15 1.94
3571 10607 7.692088 TCGTTCGGAATTACTTGTTTACAAAA 58.308 30.769 0.00 0.00 35.15 2.44
3572 10608 7.244166 TCGTTCGGAATTACTTGTTTACAAA 57.756 32.000 0.00 0.00 35.15 2.83
3573 10609 6.841443 TCGTTCGGAATTACTTGTTTACAA 57.159 33.333 0.00 0.00 0.00 2.41
3574 10610 6.073657 CCTTCGTTCGGAATTACTTGTTTACA 60.074 38.462 0.00 0.00 33.26 2.41
3575 10611 6.301861 CCTTCGTTCGGAATTACTTGTTTAC 58.698 40.000 0.00 0.00 33.26 2.01
3576 10612 5.409214 CCCTTCGTTCGGAATTACTTGTTTA 59.591 40.000 0.00 0.00 33.26 2.01
3577 10613 4.214758 CCCTTCGTTCGGAATTACTTGTTT 59.785 41.667 0.00 0.00 33.26 2.83
3578 10614 3.749609 CCCTTCGTTCGGAATTACTTGTT 59.250 43.478 0.00 0.00 33.26 2.83
3579 10615 3.007182 TCCCTTCGTTCGGAATTACTTGT 59.993 43.478 0.00 0.00 33.26 3.16
3580 10616 3.592059 TCCCTTCGTTCGGAATTACTTG 58.408 45.455 0.00 0.00 33.26 3.16
3581 10617 3.260128 ACTCCCTTCGTTCGGAATTACTT 59.740 43.478 0.00 0.00 33.26 2.24
3582 10618 2.830321 ACTCCCTTCGTTCGGAATTACT 59.170 45.455 0.00 0.00 33.26 2.24
3583 10619 3.242549 ACTCCCTTCGTTCGGAATTAC 57.757 47.619 0.00 0.00 33.26 1.89
3584 10620 3.131046 GGTACTCCCTTCGTTCGGAATTA 59.869 47.826 0.00 0.00 33.26 1.40
3585 10621 2.093816 GGTACTCCCTTCGTTCGGAATT 60.094 50.000 0.00 0.00 33.26 2.17
3586 10622 1.479730 GGTACTCCCTTCGTTCGGAAT 59.520 52.381 0.00 0.00 33.26 3.01
3587 10623 0.890683 GGTACTCCCTTCGTTCGGAA 59.109 55.000 0.00 0.00 0.00 4.30
3588 10624 0.038744 AGGTACTCCCTTCGTTCGGA 59.961 55.000 0.00 0.00 42.73 4.55
3589 10625 2.576298 AGGTACTCCCTTCGTTCGG 58.424 57.895 0.00 0.00 42.73 4.30
3599 10635 4.081586 CAGGGAGACTTTACAAGGTACTCC 60.082 50.000 0.00 0.00 38.49 3.85
3738 11250 3.717404 CCGACAAAGTTTTCGTTTCTTCG 59.283 43.478 14.64 0.00 33.23 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.