Multiple sequence alignment - TraesCS4B01G099000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G099000 chr4B 100.000 2672 0 0 1 2672 104332736 104330065 0.000000e+00 4935.0
1 TraesCS4B01G099000 chr3B 99.503 1609 8 0 702 2310 4989683 4991291 0.000000e+00 2928.0
2 TraesCS4B01G099000 chr3B 99.199 1622 10 3 689 2310 475588824 475590442 0.000000e+00 2920.0
3 TraesCS4B01G099000 chr3B 99.721 358 1 0 2315 2672 4991423 4991780 0.000000e+00 656.0
4 TraesCS4B01G099000 chr3B 99.441 358 2 0 2315 2672 475591599 475591956 0.000000e+00 651.0
5 TraesCS4B01G099000 chr2A 99.503 1609 8 0 702 2310 115736523 115734915 0.000000e+00 2928.0
6 TraesCS4B01G099000 chr2A 99.441 1609 9 0 702 2310 465594202 465592594 0.000000e+00 2922.0
7 TraesCS4B01G099000 chr1B 99.503 1609 8 0 702 2310 239782603 239784211 0.000000e+00 2928.0
8 TraesCS4B01G099000 chr1B 99.257 1616 11 1 696 2310 230593732 230595347 0.000000e+00 2916.0
9 TraesCS4B01G099000 chr1B 100.000 65 0 0 376 440 409237640 409237576 1.300000e-23 121.0
10 TraesCS4B01G099000 chr1A 99.503 1609 8 0 702 2310 50625256 50623648 0.000000e+00 2928.0
11 TraesCS4B01G099000 chr5A 99.441 1609 9 0 702 2310 92671585 92669977 0.000000e+00 2922.0
12 TraesCS4B01G099000 chr5A 99.721 358 1 0 2315 2672 92668470 92668113 0.000000e+00 656.0
13 TraesCS4B01G099000 chr5A 100.000 60 0 0 376 435 296485661 296485720 7.820000e-21 111.0
14 TraesCS4B01G099000 chr3A 99.379 1610 10 0 701 2310 141697905 141699514 0.000000e+00 2918.0
15 TraesCS4B01G099000 chr3A 99.162 358 3 0 2315 2672 141700761 141701118 0.000000e+00 645.0
16 TraesCS4B01G099000 chr3A 98.507 67 1 0 376 442 415794590 415794524 4.670000e-23 119.0
17 TraesCS4B01G099000 chr7A 99.721 358 1 0 2315 2672 210116701 210117058 0.000000e+00 656.0
18 TraesCS4B01G099000 chr7A 99.721 358 1 0 2315 2672 327159192 327158835 0.000000e+00 656.0
19 TraesCS4B01G099000 chr7A 96.970 66 2 0 376 441 326044463 326044528 7.820000e-21 111.0
20 TraesCS4B01G099000 chr7A 89.333 75 8 0 568 642 138739536 138739610 7.870000e-16 95.3
21 TraesCS4B01G099000 chr5B 99.441 358 2 0 2315 2672 652325160 652324803 0.000000e+00 651.0
22 TraesCS4B01G099000 chr5B 93.750 80 1 4 376 451 305587537 305587616 1.680000e-22 117.0
23 TraesCS4B01G099000 chr2B 99.441 358 2 0 2315 2672 172273447 172273090 0.000000e+00 651.0
24 TraesCS4B01G099000 chrUn 99.162 358 3 0 2315 2672 64800920 64801277 0.000000e+00 645.0
25 TraesCS4B01G099000 chr4D 92.260 323 18 5 1 320 70354732 70354414 4.060000e-123 451.0
26 TraesCS4B01G099000 chr4D 92.381 210 14 2 434 642 70354100 70353892 5.590000e-77 298.0
27 TraesCS4B01G099000 chr4D 93.750 96 6 0 440 535 70354297 70354202 7.710000e-31 145.0
28 TraesCS4B01G099000 chr4D 90.667 75 7 0 568 642 503868684 503868610 1.690000e-17 100.0
29 TraesCS4B01G099000 chr4D 96.000 50 2 0 329 378 70354156 70354107 6.130000e-12 82.4
30 TraesCS4B01G099000 chr4D 96.000 50 2 0 329 378 70354356 70354307 6.130000e-12 82.4
31 TraesCS4B01G099000 chr4A 86.891 267 23 8 434 692 523449866 523449604 3.370000e-74 289.0
32 TraesCS4B01G099000 chr4A 94.792 96 5 0 440 535 523450063 523449968 1.660000e-32 150.0
33 TraesCS4B01G099000 chr4A 93.814 97 2 2 225 320 523450274 523450181 2.770000e-30 143.0
34 TraesCS4B01G099000 chr4A 86.667 105 9 3 569 672 523449602 523449702 7.820000e-21 111.0
35 TraesCS4B01G099000 chr4A 95.918 49 2 0 329 377 523449922 523449874 2.210000e-11 80.5
36 TraesCS4B01G099000 chr6D 98.485 66 1 0 376 441 77937727 77937792 1.680000e-22 117.0
37 TraesCS4B01G099000 chr6D 88.462 78 8 1 566 642 349927780 349927703 2.830000e-15 93.5
38 TraesCS4B01G099000 chr2D 98.485 66 1 0 376 441 185395670 185395605 1.680000e-22 117.0
39 TraesCS4B01G099000 chr2D 100.000 59 0 0 376 434 116908457 116908515 2.810000e-20 110.0
40 TraesCS4B01G099000 chr6B 100.000 60 0 0 376 435 532335772 532335831 7.820000e-21 111.0
41 TraesCS4B01G099000 chr6B 90.667 75 6 1 566 639 530560356 530560430 6.090000e-17 99.0
42 TraesCS4B01G099000 chr7D 90.667 75 7 0 568 642 424268297 424268223 1.690000e-17 100.0
43 TraesCS4B01G099000 chr7B 84.270 89 14 0 563 651 326671237 326671149 1.320000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G099000 chr4B 104330065 104332736 2671 True 4935.00 4935 100.0000 1 2672 1 chr4B.!!$R1 2671
1 TraesCS4B01G099000 chr3B 4989683 4991780 2097 False 1792.00 2928 99.6120 702 2672 2 chr3B.!!$F1 1970
2 TraesCS4B01G099000 chr3B 475588824 475591956 3132 False 1785.50 2920 99.3200 689 2672 2 chr3B.!!$F2 1983
3 TraesCS4B01G099000 chr2A 115734915 115736523 1608 True 2928.00 2928 99.5030 702 2310 1 chr2A.!!$R1 1608
4 TraesCS4B01G099000 chr2A 465592594 465594202 1608 True 2922.00 2922 99.4410 702 2310 1 chr2A.!!$R2 1608
5 TraesCS4B01G099000 chr1B 239782603 239784211 1608 False 2928.00 2928 99.5030 702 2310 1 chr1B.!!$F2 1608
6 TraesCS4B01G099000 chr1B 230593732 230595347 1615 False 2916.00 2916 99.2570 696 2310 1 chr1B.!!$F1 1614
7 TraesCS4B01G099000 chr1A 50623648 50625256 1608 True 2928.00 2928 99.5030 702 2310 1 chr1A.!!$R1 1608
8 TraesCS4B01G099000 chr5A 92668113 92671585 3472 True 1789.00 2922 99.5810 702 2672 2 chr5A.!!$R1 1970
9 TraesCS4B01G099000 chr3A 141697905 141701118 3213 False 1781.50 2918 99.2705 701 2672 2 chr3A.!!$F1 1971
10 TraesCS4B01G099000 chr4D 70353892 70354732 840 True 211.76 451 94.0782 1 642 5 chr4D.!!$R2 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 365 0.041833 TTCTGCTCCTCTAGGCACCT 59.958 55.0 0.0 0.0 34.57 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2312 2686 1.596496 AGCTGGTTGTAGGCCCTATT 58.404 50.0 0.0 0.0 0.0 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.924511 AGGTGATTTCTTGTTTGATCTTAGAA 57.075 30.769 0.00 0.00 0.00 2.10
99 102 7.881775 ACAAACAATTGTCTCTTAGTTTCCT 57.118 32.000 12.39 0.00 46.78 3.36
100 103 8.974060 ACAAACAATTGTCTCTTAGTTTCCTA 57.026 30.769 12.39 0.00 46.78 2.94
101 104 9.403583 ACAAACAATTGTCTCTTAGTTTCCTAA 57.596 29.630 12.39 0.00 46.78 2.69
102 105 9.665264 CAAACAATTGTCTCTTAGTTTCCTAAC 57.335 33.333 12.39 0.00 34.36 2.34
103 106 7.981102 ACAATTGTCTCTTAGTTTCCTAACC 57.019 36.000 4.92 0.00 34.71 2.85
104 107 7.746703 ACAATTGTCTCTTAGTTTCCTAACCT 58.253 34.615 4.92 0.00 34.71 3.50
105 108 8.218488 ACAATTGTCTCTTAGTTTCCTAACCTT 58.782 33.333 4.92 0.00 34.71 3.50
106 109 8.722394 CAATTGTCTCTTAGTTTCCTAACCTTC 58.278 37.037 0.00 0.00 34.71 3.46
107 110 6.356186 TGTCTCTTAGTTTCCTAACCTTCC 57.644 41.667 0.00 0.00 34.71 3.46
108 111 5.842328 TGTCTCTTAGTTTCCTAACCTTCCA 59.158 40.000 0.00 0.00 34.71 3.53
109 112 6.164876 GTCTCTTAGTTTCCTAACCTTCCAC 58.835 44.000 0.00 0.00 34.71 4.02
110 113 5.047519 TCTCTTAGTTTCCTAACCTTCCACG 60.048 44.000 0.00 0.00 34.71 4.94
111 114 2.853235 AGTTTCCTAACCTTCCACGG 57.147 50.000 0.00 0.00 34.71 4.94
112 115 2.052468 AGTTTCCTAACCTTCCACGGT 58.948 47.619 0.00 0.00 39.48 4.83
113 116 3.242011 AGTTTCCTAACCTTCCACGGTA 58.758 45.455 0.00 0.00 35.89 4.02
114 117 3.842436 AGTTTCCTAACCTTCCACGGTAT 59.158 43.478 0.00 0.00 35.89 2.73
115 118 3.899052 TTCCTAACCTTCCACGGTATG 57.101 47.619 0.00 0.00 35.89 2.39
116 119 3.104519 TCCTAACCTTCCACGGTATGA 57.895 47.619 0.00 0.00 35.89 2.15
117 120 3.028850 TCCTAACCTTCCACGGTATGAG 58.971 50.000 0.00 0.00 35.89 2.90
118 121 2.764572 CCTAACCTTCCACGGTATGAGT 59.235 50.000 0.00 0.00 35.89 3.41
119 122 3.197116 CCTAACCTTCCACGGTATGAGTT 59.803 47.826 0.00 0.00 35.89 3.01
120 123 3.329929 AACCTTCCACGGTATGAGTTC 57.670 47.619 0.00 0.00 35.89 3.01
121 124 2.537143 ACCTTCCACGGTATGAGTTCT 58.463 47.619 0.00 0.00 34.94 3.01
122 125 3.705051 ACCTTCCACGGTATGAGTTCTA 58.295 45.455 0.00 0.00 34.94 2.10
123 126 4.287552 ACCTTCCACGGTATGAGTTCTAT 58.712 43.478 0.00 0.00 34.94 1.98
124 127 4.341520 ACCTTCCACGGTATGAGTTCTATC 59.658 45.833 0.00 0.00 34.94 2.08
125 128 4.262079 CCTTCCACGGTATGAGTTCTATCC 60.262 50.000 0.00 0.00 0.00 2.59
126 129 3.905968 TCCACGGTATGAGTTCTATCCA 58.094 45.455 0.00 0.00 0.00 3.41
127 130 3.889538 TCCACGGTATGAGTTCTATCCAG 59.110 47.826 0.00 0.00 0.00 3.86
128 131 3.637229 CCACGGTATGAGTTCTATCCAGT 59.363 47.826 0.00 0.00 0.00 4.00
129 132 4.261656 CCACGGTATGAGTTCTATCCAGTC 60.262 50.000 0.00 0.00 0.00 3.51
130 133 3.890147 ACGGTATGAGTTCTATCCAGTCC 59.110 47.826 0.00 0.00 0.00 3.85
131 134 3.256136 CGGTATGAGTTCTATCCAGTCCC 59.744 52.174 0.00 0.00 0.00 4.46
132 135 4.223953 GGTATGAGTTCTATCCAGTCCCA 58.776 47.826 0.00 0.00 0.00 4.37
133 136 4.039366 GGTATGAGTTCTATCCAGTCCCAC 59.961 50.000 0.00 0.00 0.00 4.61
134 137 2.467880 TGAGTTCTATCCAGTCCCACC 58.532 52.381 0.00 0.00 0.00 4.61
135 138 2.044492 TGAGTTCTATCCAGTCCCACCT 59.956 50.000 0.00 0.00 0.00 4.00
136 139 2.432510 GAGTTCTATCCAGTCCCACCTG 59.567 54.545 0.00 0.00 0.00 4.00
142 145 4.351054 CAGTCCCACCTGGCCCAC 62.351 72.222 0.00 0.00 0.00 4.61
156 159 3.929002 CCACGGGGAGTATGTCGA 58.071 61.111 0.00 0.00 35.59 4.20
157 160 2.195389 CCACGGGGAGTATGTCGAA 58.805 57.895 0.00 0.00 35.59 3.71
158 161 0.179119 CCACGGGGAGTATGTCGAAC 60.179 60.000 0.00 0.00 35.59 3.95
159 162 0.179119 CACGGGGAGTATGTCGAACC 60.179 60.000 0.00 0.00 0.00 3.62
160 163 0.324091 ACGGGGAGTATGTCGAACCT 60.324 55.000 0.00 0.00 0.00 3.50
161 164 1.064463 ACGGGGAGTATGTCGAACCTA 60.064 52.381 0.00 0.00 0.00 3.08
162 165 1.607628 CGGGGAGTATGTCGAACCTAG 59.392 57.143 0.00 0.00 0.00 3.02
163 166 2.747467 CGGGGAGTATGTCGAACCTAGA 60.747 54.545 0.00 0.00 0.00 2.43
164 167 3.294214 GGGGAGTATGTCGAACCTAGAA 58.706 50.000 0.00 0.00 0.00 2.10
165 168 3.067883 GGGGAGTATGTCGAACCTAGAAC 59.932 52.174 0.00 0.00 0.00 3.01
166 169 3.698040 GGGAGTATGTCGAACCTAGAACA 59.302 47.826 0.00 0.00 0.00 3.18
167 170 4.341520 GGGAGTATGTCGAACCTAGAACAT 59.658 45.833 0.00 0.00 0.00 2.71
168 171 5.282510 GGAGTATGTCGAACCTAGAACATG 58.717 45.833 0.00 0.00 0.00 3.21
169 172 5.067413 GGAGTATGTCGAACCTAGAACATGA 59.933 44.000 0.00 0.00 0.00 3.07
170 173 6.137794 AGTATGTCGAACCTAGAACATGAG 57.862 41.667 0.00 0.00 0.00 2.90
171 174 3.232213 TGTCGAACCTAGAACATGAGC 57.768 47.619 0.00 0.00 0.00 4.26
172 175 2.094182 TGTCGAACCTAGAACATGAGCC 60.094 50.000 0.00 0.00 0.00 4.70
173 176 2.166664 GTCGAACCTAGAACATGAGCCT 59.833 50.000 0.00 0.00 0.00 4.58
174 177 2.166459 TCGAACCTAGAACATGAGCCTG 59.834 50.000 0.00 0.00 0.00 4.85
175 178 2.739932 CGAACCTAGAACATGAGCCTGG 60.740 54.545 0.00 0.00 0.00 4.45
176 179 1.958288 ACCTAGAACATGAGCCTGGT 58.042 50.000 0.00 0.00 0.00 4.00
177 180 2.269940 ACCTAGAACATGAGCCTGGTT 58.730 47.619 0.00 0.00 0.00 3.67
178 181 2.026822 ACCTAGAACATGAGCCTGGTTG 60.027 50.000 0.00 0.00 0.00 3.77
179 182 2.636830 CTAGAACATGAGCCTGGTTGG 58.363 52.381 0.00 0.00 39.35 3.77
180 183 1.067295 AGAACATGAGCCTGGTTGGA 58.933 50.000 0.00 0.00 38.35 3.53
181 184 1.168714 GAACATGAGCCTGGTTGGAC 58.831 55.000 0.00 0.00 38.35 4.02
182 185 0.478072 AACATGAGCCTGGTTGGACA 59.522 50.000 0.00 0.00 38.35 4.02
183 186 0.700564 ACATGAGCCTGGTTGGACAT 59.299 50.000 0.00 0.00 38.35 3.06
184 187 1.100510 CATGAGCCTGGTTGGACATG 58.899 55.000 0.00 0.00 41.57 3.21
185 188 0.700564 ATGAGCCTGGTTGGACATGT 59.299 50.000 0.00 0.00 38.35 3.21
186 189 0.478072 TGAGCCTGGTTGGACATGTT 59.522 50.000 0.00 0.00 38.35 2.71
187 190 1.702401 TGAGCCTGGTTGGACATGTTA 59.298 47.619 0.00 0.00 38.35 2.41
188 191 2.308570 TGAGCCTGGTTGGACATGTTAT 59.691 45.455 0.00 0.00 38.35 1.89
189 192 2.684881 GAGCCTGGTTGGACATGTTATG 59.315 50.000 0.00 0.00 38.35 1.90
190 193 1.750778 GCCTGGTTGGACATGTTATGG 59.249 52.381 0.00 0.00 38.35 2.74
191 194 2.620367 GCCTGGTTGGACATGTTATGGA 60.620 50.000 0.00 0.00 38.35 3.41
192 195 3.696045 CCTGGTTGGACATGTTATGGAA 58.304 45.455 0.00 0.00 38.35 3.53
193 196 3.696051 CCTGGTTGGACATGTTATGGAAG 59.304 47.826 0.00 0.00 38.35 3.46
194 197 4.335416 CTGGTTGGACATGTTATGGAAGT 58.665 43.478 0.00 0.00 33.60 3.01
195 198 5.496556 CTGGTTGGACATGTTATGGAAGTA 58.503 41.667 0.00 0.00 33.60 2.24
196 199 5.250200 TGGTTGGACATGTTATGGAAGTAC 58.750 41.667 0.00 0.00 33.60 2.73
197 200 5.221945 TGGTTGGACATGTTATGGAAGTACA 60.222 40.000 0.00 0.00 33.60 2.90
198 201 5.354234 GGTTGGACATGTTATGGAAGTACAG 59.646 44.000 0.00 0.00 33.60 2.74
199 202 5.755409 TGGACATGTTATGGAAGTACAGT 57.245 39.130 0.00 0.00 33.60 3.55
200 203 6.860790 TGGACATGTTATGGAAGTACAGTA 57.139 37.500 0.00 0.00 33.60 2.74
201 204 7.432148 TGGACATGTTATGGAAGTACAGTAT 57.568 36.000 0.00 0.00 33.60 2.12
202 205 7.857456 TGGACATGTTATGGAAGTACAGTATT 58.143 34.615 0.00 0.00 33.60 1.89
203 206 7.768582 TGGACATGTTATGGAAGTACAGTATTG 59.231 37.037 0.00 0.00 33.60 1.90
204 207 7.985184 GGACATGTTATGGAAGTACAGTATTGA 59.015 37.037 0.00 0.00 33.60 2.57
205 208 9.547753 GACATGTTATGGAAGTACAGTATTGAT 57.452 33.333 0.00 0.00 33.60 2.57
209 212 9.489084 TGTTATGGAAGTACAGTATTGATATGC 57.511 33.333 0.00 0.00 0.00 3.14
210 213 8.648097 GTTATGGAAGTACAGTATTGATATGCG 58.352 37.037 0.00 0.00 0.00 4.73
211 214 5.538118 TGGAAGTACAGTATTGATATGCGG 58.462 41.667 0.00 0.00 0.00 5.69
212 215 5.069914 TGGAAGTACAGTATTGATATGCGGT 59.930 40.000 0.00 0.00 0.00 5.68
213 216 5.634020 GGAAGTACAGTATTGATATGCGGTC 59.366 44.000 0.00 0.00 0.00 4.79
214 217 5.135508 AGTACAGTATTGATATGCGGTCC 57.864 43.478 0.00 0.00 0.00 4.46
215 218 4.587262 AGTACAGTATTGATATGCGGTCCA 59.413 41.667 0.00 0.00 0.00 4.02
216 219 4.623932 ACAGTATTGATATGCGGTCCAT 57.376 40.909 0.00 0.00 37.97 3.41
217 220 5.738619 ACAGTATTGATATGCGGTCCATA 57.261 39.130 0.00 0.00 40.52 2.74
218 221 5.724328 ACAGTATTGATATGCGGTCCATAG 58.276 41.667 0.00 0.00 39.65 2.23
219 222 5.111989 CAGTATTGATATGCGGTCCATAGG 58.888 45.833 0.00 0.00 39.65 2.57
220 223 3.634397 ATTGATATGCGGTCCATAGGG 57.366 47.619 0.00 0.00 39.65 3.53
221 224 0.613260 TGATATGCGGTCCATAGGGC 59.387 55.000 0.00 0.00 39.65 5.19
222 225 0.613260 GATATGCGGTCCATAGGGCA 59.387 55.000 0.00 0.00 39.65 5.36
223 226 0.615331 ATATGCGGTCCATAGGGCAG 59.385 55.000 0.00 0.00 39.65 4.85
224 227 0.762842 TATGCGGTCCATAGGGCAGT 60.763 55.000 0.00 0.00 39.00 4.40
225 228 2.203070 GCGGTCCATAGGGCAGTG 60.203 66.667 0.00 0.00 0.00 3.66
226 229 3.031417 GCGGTCCATAGGGCAGTGT 62.031 63.158 0.00 0.00 0.00 3.55
227 230 1.682451 GCGGTCCATAGGGCAGTGTA 61.682 60.000 0.00 0.00 0.00 2.90
228 231 1.048601 CGGTCCATAGGGCAGTGTAT 58.951 55.000 0.00 0.00 0.00 2.29
229 232 2.244695 CGGTCCATAGGGCAGTGTATA 58.755 52.381 0.00 0.00 0.00 1.47
230 233 2.832129 CGGTCCATAGGGCAGTGTATAT 59.168 50.000 0.00 0.00 0.00 0.86
231 234 4.021229 CGGTCCATAGGGCAGTGTATATA 58.979 47.826 0.00 0.00 0.00 0.86
232 235 4.098044 CGGTCCATAGGGCAGTGTATATAG 59.902 50.000 0.00 0.00 0.00 1.31
233 236 4.406003 GGTCCATAGGGCAGTGTATATAGG 59.594 50.000 0.00 0.00 0.00 2.57
234 237 5.269991 GTCCATAGGGCAGTGTATATAGGA 58.730 45.833 0.00 0.00 0.00 2.94
235 238 5.361285 GTCCATAGGGCAGTGTATATAGGAG 59.639 48.000 0.00 0.00 0.00 3.69
236 239 5.255443 TCCATAGGGCAGTGTATATAGGAGA 59.745 44.000 0.00 0.00 0.00 3.71
237 240 6.068200 TCCATAGGGCAGTGTATATAGGAGAT 60.068 42.308 0.00 0.00 0.00 2.75
238 241 6.613271 CCATAGGGCAGTGTATATAGGAGATT 59.387 42.308 0.00 0.00 0.00 2.40
239 242 7.418368 CCATAGGGCAGTGTATATAGGAGATTG 60.418 44.444 0.00 0.00 0.00 2.67
240 243 5.655394 AGGGCAGTGTATATAGGAGATTGA 58.345 41.667 0.00 0.00 0.00 2.57
241 244 5.482175 AGGGCAGTGTATATAGGAGATTGAC 59.518 44.000 0.00 0.00 0.00 3.18
242 245 5.246203 GGGCAGTGTATATAGGAGATTGACA 59.754 44.000 0.00 0.00 0.00 3.58
243 246 6.070538 GGGCAGTGTATATAGGAGATTGACAT 60.071 42.308 0.00 0.00 0.00 3.06
244 247 6.815641 GGCAGTGTATATAGGAGATTGACATG 59.184 42.308 0.00 0.00 0.00 3.21
245 248 6.815641 GCAGTGTATATAGGAGATTGACATGG 59.184 42.308 0.00 0.00 0.00 3.66
246 249 7.326454 CAGTGTATATAGGAGATTGACATGGG 58.674 42.308 0.00 0.00 0.00 4.00
247 250 6.070538 AGTGTATATAGGAGATTGACATGGGC 60.071 42.308 0.00 0.00 0.00 5.36
248 251 5.784906 TGTATATAGGAGATTGACATGGGCA 59.215 40.000 0.00 0.00 0.00 5.36
249 252 3.498774 ATAGGAGATTGACATGGGCAC 57.501 47.619 0.00 0.00 0.00 5.01
250 253 0.994247 AGGAGATTGACATGGGCACA 59.006 50.000 0.00 0.00 0.00 4.57
251 254 1.355381 AGGAGATTGACATGGGCACAA 59.645 47.619 0.00 0.00 0.00 3.33
252 255 2.170166 GGAGATTGACATGGGCACAAA 58.830 47.619 0.00 0.00 0.00 2.83
253 256 2.094545 GGAGATTGACATGGGCACAAAC 60.095 50.000 0.00 0.00 0.00 2.93
254 257 2.821969 GAGATTGACATGGGCACAAACT 59.178 45.455 0.00 2.57 31.41 2.66
255 258 2.821969 AGATTGACATGGGCACAAACTC 59.178 45.455 0.00 0.00 0.00 3.01
256 259 2.363306 TTGACATGGGCACAAACTCT 57.637 45.000 0.00 0.00 0.00 3.24
257 260 3.500448 TTGACATGGGCACAAACTCTA 57.500 42.857 0.00 0.00 0.00 2.43
258 261 3.500448 TGACATGGGCACAAACTCTAA 57.500 42.857 0.00 0.00 0.00 2.10
259 262 3.826524 TGACATGGGCACAAACTCTAAA 58.173 40.909 0.00 0.00 0.00 1.85
260 263 4.211125 TGACATGGGCACAAACTCTAAAA 58.789 39.130 0.00 0.00 0.00 1.52
261 264 4.646945 TGACATGGGCACAAACTCTAAAAA 59.353 37.500 0.00 0.00 0.00 1.94
284 287 9.669024 AAAAAGGCCCATAATACCTATTATTGT 57.331 29.630 0.00 0.00 36.90 2.71
286 289 9.749340 AAAGGCCCATAATACCTATTATTGTAC 57.251 33.333 0.00 0.00 36.90 2.90
287 290 8.695663 AGGCCCATAATACCTATTATTGTACT 57.304 34.615 0.00 0.00 36.90 2.73
288 291 8.769359 AGGCCCATAATACCTATTATTGTACTC 58.231 37.037 0.00 0.00 36.90 2.59
289 292 8.769359 GGCCCATAATACCTATTATTGTACTCT 58.231 37.037 0.00 0.00 36.90 3.24
311 314 9.702253 ACTCTTAATAGGATAAGTTGAGTCTCA 57.298 33.333 0.00 0.00 35.01 3.27
349 352 9.573133 GTTTATTAGTTAAACATGCATTCTGCT 57.427 29.630 0.00 0.00 45.98 4.24
350 353 9.787532 TTTATTAGTTAAACATGCATTCTGCTC 57.212 29.630 0.00 0.00 45.31 4.26
351 354 4.708726 AGTTAAACATGCATTCTGCTCC 57.291 40.909 0.00 0.00 45.31 4.70
352 355 4.338879 AGTTAAACATGCATTCTGCTCCT 58.661 39.130 0.00 0.00 45.31 3.69
353 356 4.397417 AGTTAAACATGCATTCTGCTCCTC 59.603 41.667 0.00 0.00 45.31 3.71
354 357 2.803030 AACATGCATTCTGCTCCTCT 57.197 45.000 0.00 0.00 45.31 3.69
355 358 3.920231 AACATGCATTCTGCTCCTCTA 57.080 42.857 0.00 0.00 45.31 2.43
356 359 3.472283 ACATGCATTCTGCTCCTCTAG 57.528 47.619 0.00 0.00 45.31 2.43
357 360 2.104451 ACATGCATTCTGCTCCTCTAGG 59.896 50.000 0.00 0.00 45.31 3.02
358 361 0.467384 TGCATTCTGCTCCTCTAGGC 59.533 55.000 0.34 0.00 45.31 3.93
359 362 0.467384 GCATTCTGCTCCTCTAGGCA 59.533 55.000 0.00 0.00 40.96 4.75
360 363 1.809651 GCATTCTGCTCCTCTAGGCAC 60.810 57.143 0.00 0.00 40.96 5.01
361 364 1.127343 ATTCTGCTCCTCTAGGCACC 58.873 55.000 0.00 0.00 34.57 5.01
362 365 0.041833 TTCTGCTCCTCTAGGCACCT 59.958 55.000 0.00 0.00 34.57 4.00
363 366 0.927029 TCTGCTCCTCTAGGCACCTA 59.073 55.000 0.00 0.00 34.57 3.08
364 367 1.288037 TCTGCTCCTCTAGGCACCTAA 59.712 52.381 0.00 0.00 34.57 2.69
365 368 1.410882 CTGCTCCTCTAGGCACCTAAC 59.589 57.143 0.00 0.00 34.57 2.34
366 369 1.273041 TGCTCCTCTAGGCACCTAACA 60.273 52.381 0.00 0.00 33.23 2.41
367 370 1.137282 GCTCCTCTAGGCACCTAACAC 59.863 57.143 0.00 0.00 34.44 3.32
368 371 2.741145 CTCCTCTAGGCACCTAACACT 58.259 52.381 0.00 0.00 34.44 3.55
369 372 2.428890 CTCCTCTAGGCACCTAACACTG 59.571 54.545 0.00 0.00 34.44 3.66
370 373 2.042569 TCCTCTAGGCACCTAACACTGA 59.957 50.000 0.00 0.00 34.44 3.41
371 374 2.428890 CCTCTAGGCACCTAACACTGAG 59.571 54.545 0.00 1.09 0.00 3.35
372 375 1.825474 TCTAGGCACCTAACACTGAGC 59.175 52.381 0.00 0.00 0.00 4.26
373 376 1.550524 CTAGGCACCTAACACTGAGCA 59.449 52.381 0.00 0.00 0.00 4.26
374 377 0.764890 AGGCACCTAACACTGAGCAA 59.235 50.000 0.00 0.00 0.00 3.91
375 378 1.352352 AGGCACCTAACACTGAGCAAT 59.648 47.619 0.00 0.00 0.00 3.56
376 379 2.162681 GGCACCTAACACTGAGCAATT 58.837 47.619 0.00 0.00 0.00 2.32
377 380 2.162408 GGCACCTAACACTGAGCAATTC 59.838 50.000 0.00 0.00 0.00 2.17
378 381 2.813754 GCACCTAACACTGAGCAATTCA 59.186 45.455 0.00 0.00 0.00 2.57
379 382 3.365364 GCACCTAACACTGAGCAATTCAC 60.365 47.826 0.00 0.00 0.00 3.18
380 383 3.189287 CACCTAACACTGAGCAATTCACC 59.811 47.826 0.00 0.00 0.00 4.02
381 384 3.073062 ACCTAACACTGAGCAATTCACCT 59.927 43.478 0.00 0.00 0.00 4.00
382 385 3.686726 CCTAACACTGAGCAATTCACCTC 59.313 47.826 0.00 0.00 0.00 3.85
383 386 3.498774 AACACTGAGCAATTCACCTCT 57.501 42.857 0.00 0.00 0.00 3.69
384 387 4.623932 AACACTGAGCAATTCACCTCTA 57.376 40.909 0.00 0.00 0.00 2.43
385 388 4.199432 ACACTGAGCAATTCACCTCTAG 57.801 45.455 0.00 0.00 0.00 2.43
386 389 2.935201 CACTGAGCAATTCACCTCTAGC 59.065 50.000 0.00 0.00 0.00 3.42
387 390 2.093235 ACTGAGCAATTCACCTCTAGCC 60.093 50.000 0.00 0.00 0.00 3.93
388 391 2.170187 CTGAGCAATTCACCTCTAGCCT 59.830 50.000 0.00 0.00 0.00 4.58
389 392 3.374764 TGAGCAATTCACCTCTAGCCTA 58.625 45.455 0.00 0.00 0.00 3.93
390 393 3.133003 TGAGCAATTCACCTCTAGCCTAC 59.867 47.826 0.00 0.00 0.00 3.18
391 394 2.436173 AGCAATTCACCTCTAGCCTACC 59.564 50.000 0.00 0.00 0.00 3.18
392 395 2.485657 GCAATTCACCTCTAGCCTACCC 60.486 54.545 0.00 0.00 0.00 3.69
393 396 2.104669 ATTCACCTCTAGCCTACCCC 57.895 55.000 0.00 0.00 0.00 4.95
394 397 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
395 398 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
396 399 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
397 400 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
398 401 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
399 402 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
400 403 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
401 404 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
402 405 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
403 406 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
414 417 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
415 418 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
416 419 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
417 420 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
418 421 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
419 422 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
420 423 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
421 424 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
422 425 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
423 426 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
424 427 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
425 428 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
426 429 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
427 430 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
428 431 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
429 432 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
430 433 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
431 434 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
432 435 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
433 436 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
434 437 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
435 438 4.686554 GGCTTTGTTGTTGTTGTTGTTGTA 59.313 37.500 0.00 0.00 0.00 2.41
436 439 5.164002 GGCTTTGTTGTTGTTGTTGTTGTAG 60.164 40.000 0.00 0.00 0.00 2.74
437 440 5.164002 GCTTTGTTGTTGTTGTTGTTGTAGG 60.164 40.000 0.00 0.00 0.00 3.18
438 441 4.442375 TGTTGTTGTTGTTGTTGTAGGG 57.558 40.909 0.00 0.00 0.00 3.53
439 442 4.079970 TGTTGTTGTTGTTGTTGTAGGGA 58.920 39.130 0.00 0.00 0.00 4.20
440 443 4.707448 TGTTGTTGTTGTTGTTGTAGGGAT 59.293 37.500 0.00 0.00 0.00 3.85
441 444 4.909696 TGTTGTTGTTGTTGTAGGGATG 57.090 40.909 0.00 0.00 0.00 3.51
442 445 3.634448 TGTTGTTGTTGTTGTAGGGATGG 59.366 43.478 0.00 0.00 0.00 3.51
443 446 2.235016 TGTTGTTGTTGTAGGGATGGC 58.765 47.619 0.00 0.00 0.00 4.40
444 447 2.158534 TGTTGTTGTTGTAGGGATGGCT 60.159 45.455 0.00 0.00 0.00 4.75
445 448 3.073209 TGTTGTTGTTGTAGGGATGGCTA 59.927 43.478 0.00 0.00 0.00 3.93
446 449 3.343941 TGTTGTTGTAGGGATGGCTAC 57.656 47.619 0.00 0.00 0.00 3.58
447 450 2.640332 TGTTGTTGTAGGGATGGCTACA 59.360 45.455 0.00 0.00 34.66 2.74
448 451 3.265737 TGTTGTTGTAGGGATGGCTACAT 59.734 43.478 0.00 0.00 40.85 2.29
449 452 4.471747 TGTTGTTGTAGGGATGGCTACATA 59.528 41.667 0.00 0.00 37.47 2.29
450 453 4.682778 TGTTGTAGGGATGGCTACATAC 57.317 45.455 0.00 0.00 37.47 2.39
451 454 4.034410 TGTTGTAGGGATGGCTACATACA 58.966 43.478 0.00 0.00 39.87 2.29
452 455 4.100963 TGTTGTAGGGATGGCTACATACAG 59.899 45.833 0.00 0.00 39.87 2.74
453 456 4.193240 TGTAGGGATGGCTACATACAGA 57.807 45.455 0.00 0.00 39.87 3.41
454 457 4.152647 TGTAGGGATGGCTACATACAGAG 58.847 47.826 0.00 0.00 39.87 3.35
455 458 3.336509 AGGGATGGCTACATACAGAGT 57.663 47.619 0.00 0.00 39.87 3.24
456 459 2.968574 AGGGATGGCTACATACAGAGTG 59.031 50.000 0.00 0.00 39.87 3.51
457 460 2.548920 GGGATGGCTACATACAGAGTGC 60.549 54.545 0.00 0.00 39.87 4.40
458 461 2.103094 GGATGGCTACATACAGAGTGCA 59.897 50.000 0.00 0.00 37.88 4.57
459 462 2.967599 TGGCTACATACAGAGTGCAG 57.032 50.000 0.00 0.00 0.00 4.41
460 463 2.456577 TGGCTACATACAGAGTGCAGA 58.543 47.619 0.00 0.00 0.00 4.26
461 464 3.033909 TGGCTACATACAGAGTGCAGAT 58.966 45.455 0.00 0.00 0.00 2.90
462 465 3.452264 TGGCTACATACAGAGTGCAGATT 59.548 43.478 0.00 0.00 0.00 2.40
463 466 3.806521 GGCTACATACAGAGTGCAGATTG 59.193 47.826 0.00 0.00 0.00 2.67
464 467 3.247173 GCTACATACAGAGTGCAGATTGC 59.753 47.826 0.00 0.00 45.29 3.56
482 485 9.817365 GCAGATTGCAACTAGTGTAATAATATG 57.183 33.333 0.00 3.02 42.00 1.78
488 491 9.104965 TGCAACTAGTGTAATAATATGTTGTCC 57.895 33.333 0.00 0.00 36.78 4.02
489 492 9.104965 GCAACTAGTGTAATAATATGTTGTCCA 57.895 33.333 0.00 0.00 36.78 4.02
495 498 9.801873 AGTGTAATAATATGTTGTCCAAATTGC 57.198 29.630 0.00 0.00 0.00 3.56
496 499 9.579768 GTGTAATAATATGTTGTCCAAATTGCA 57.420 29.630 0.00 0.00 0.00 4.08
502 505 7.775397 ATATGTTGTCCAAATTGCAATTAGC 57.225 32.000 24.35 14.54 45.96 3.09
503 506 5.212532 TGTTGTCCAAATTGCAATTAGCT 57.787 34.783 24.35 7.06 45.94 3.32
504 507 5.229423 TGTTGTCCAAATTGCAATTAGCTC 58.771 37.500 24.35 15.25 45.94 4.09
505 508 5.010922 TGTTGTCCAAATTGCAATTAGCTCT 59.989 36.000 24.35 6.29 45.94 4.09
506 509 6.208402 TGTTGTCCAAATTGCAATTAGCTCTA 59.792 34.615 24.35 10.24 45.94 2.43
507 510 6.832520 TGTCCAAATTGCAATTAGCTCTAA 57.167 33.333 24.35 5.60 45.94 2.10
508 511 7.225784 TGTCCAAATTGCAATTAGCTCTAAA 57.774 32.000 24.35 4.21 45.94 1.85
509 512 7.665690 TGTCCAAATTGCAATTAGCTCTAAAA 58.334 30.769 24.35 2.97 45.94 1.52
510 513 8.147058 TGTCCAAATTGCAATTAGCTCTAAAAA 58.853 29.630 24.35 1.66 45.94 1.94
511 514 8.435430 GTCCAAATTGCAATTAGCTCTAAAAAC 58.565 33.333 24.35 7.57 45.94 2.43
512 515 8.367156 TCCAAATTGCAATTAGCTCTAAAAACT 58.633 29.630 24.35 1.82 45.94 2.66
513 516 9.638239 CCAAATTGCAATTAGCTCTAAAAACTA 57.362 29.630 24.35 0.00 45.94 2.24
532 535 9.938280 AAAAACTAAAATAAAAGTAGGGATGGC 57.062 29.630 0.00 0.00 0.00 4.40
533 536 8.895141 AAACTAAAATAAAAGTAGGGATGGCT 57.105 30.769 0.00 0.00 0.00 4.75
534 537 9.984590 AAACTAAAATAAAAGTAGGGATGGCTA 57.015 29.630 0.00 0.00 0.00 3.93
535 538 8.975663 ACTAAAATAAAAGTAGGGATGGCTAC 57.024 34.615 0.00 0.00 0.00 3.58
536 539 8.779031 ACTAAAATAAAAGTAGGGATGGCTACT 58.221 33.333 0.00 0.00 37.94 2.57
537 540 9.628500 CTAAAATAAAAGTAGGGATGGCTACTT 57.372 33.333 0.00 0.00 45.12 2.24
539 542 8.975663 AAATAAAAGTAGGGATGGCTACTTAC 57.024 34.615 0.00 0.00 43.19 2.34
540 543 7.685849 ATAAAAGTAGGGATGGCTACTTACA 57.314 36.000 0.00 0.00 43.19 2.41
541 544 6.382919 AAAAGTAGGGATGGCTACTTACAA 57.617 37.500 0.00 0.00 43.19 2.41
542 545 6.382919 AAAGTAGGGATGGCTACTTACAAA 57.617 37.500 0.00 0.00 43.19 2.83
543 546 5.354842 AGTAGGGATGGCTACTTACAAAC 57.645 43.478 0.00 0.00 33.06 2.93
544 547 4.781087 AGTAGGGATGGCTACTTACAAACA 59.219 41.667 0.00 0.00 33.06 2.83
545 548 4.650972 AGGGATGGCTACTTACAAACAA 57.349 40.909 0.00 0.00 0.00 2.83
546 549 4.332828 AGGGATGGCTACTTACAAACAAC 58.667 43.478 0.00 0.00 0.00 3.32
547 550 3.442625 GGGATGGCTACTTACAAACAACC 59.557 47.826 0.00 0.00 0.00 3.77
548 551 4.332828 GGATGGCTACTTACAAACAACCT 58.667 43.478 0.00 0.00 0.00 3.50
549 552 4.765339 GGATGGCTACTTACAAACAACCTT 59.235 41.667 0.00 0.00 0.00 3.50
550 553 5.243060 GGATGGCTACTTACAAACAACCTTT 59.757 40.000 0.00 0.00 0.00 3.11
551 554 6.239204 GGATGGCTACTTACAAACAACCTTTT 60.239 38.462 0.00 0.00 0.00 2.27
552 555 6.532988 TGGCTACTTACAAACAACCTTTTT 57.467 33.333 0.00 0.00 0.00 1.94
553 556 6.334202 TGGCTACTTACAAACAACCTTTTTG 58.666 36.000 0.00 0.00 39.44 2.44
554 557 6.071278 TGGCTACTTACAAACAACCTTTTTGT 60.071 34.615 5.82 5.82 46.45 2.83
555 558 7.122353 TGGCTACTTACAAACAACCTTTTTGTA 59.878 33.333 4.03 4.03 43.72 2.41
556 559 7.433131 GGCTACTTACAAACAACCTTTTTGTAC 59.567 37.037 7.08 0.00 44.97 2.90
557 560 7.969508 GCTACTTACAAACAACCTTTTTGTACA 59.030 33.333 7.08 0.00 44.97 2.90
558 561 9.843334 CTACTTACAAACAACCTTTTTGTACAA 57.157 29.630 3.59 3.59 44.97 2.41
560 563 9.543783 ACTTACAAACAACCTTTTTGTACAAAA 57.456 25.926 26.05 26.05 44.97 2.44
567 570 9.877178 AACAACCTTTTTGTACAAAATATGTCA 57.123 25.926 29.15 15.37 42.70 3.58
568 571 9.877178 ACAACCTTTTTGTACAAAATATGTCAA 57.123 25.926 29.15 14.75 42.70 3.18
581 584 9.747898 ACAAAATATGTCAATTTAGTACTCCCA 57.252 29.630 0.00 0.00 37.96 4.37
583 586 8.747538 AAATATGTCAATTTAGTACTCCCACC 57.252 34.615 0.00 0.00 0.00 4.61
584 587 4.196626 TGTCAATTTAGTACTCCCACCG 57.803 45.455 0.00 0.00 0.00 4.94
585 588 3.833650 TGTCAATTTAGTACTCCCACCGA 59.166 43.478 0.00 0.00 0.00 4.69
586 589 4.468510 TGTCAATTTAGTACTCCCACCGAT 59.531 41.667 0.00 0.00 0.00 4.18
587 590 5.048507 GTCAATTTAGTACTCCCACCGATC 58.951 45.833 0.00 0.00 0.00 3.69
588 591 4.100498 TCAATTTAGTACTCCCACCGATCC 59.900 45.833 0.00 0.00 0.00 3.36
589 592 2.832643 TTAGTACTCCCACCGATCCA 57.167 50.000 0.00 0.00 0.00 3.41
590 593 3.323774 TTAGTACTCCCACCGATCCAT 57.676 47.619 0.00 0.00 0.00 3.41
591 594 4.458256 TTAGTACTCCCACCGATCCATA 57.542 45.455 0.00 0.00 0.00 2.74
592 595 3.544698 AGTACTCCCACCGATCCATAT 57.455 47.619 0.00 0.00 0.00 1.78
593 596 3.858135 AGTACTCCCACCGATCCATATT 58.142 45.455 0.00 0.00 0.00 1.28
594 597 5.006896 AGTACTCCCACCGATCCATATTA 57.993 43.478 0.00 0.00 0.00 0.98
595 598 4.771054 AGTACTCCCACCGATCCATATTAC 59.229 45.833 0.00 0.00 0.00 1.89
596 599 3.858135 ACTCCCACCGATCCATATTACT 58.142 45.455 0.00 0.00 0.00 2.24
597 600 4.232091 ACTCCCACCGATCCATATTACTT 58.768 43.478 0.00 0.00 0.00 2.24
598 601 4.040461 ACTCCCACCGATCCATATTACTTG 59.960 45.833 0.00 0.00 0.00 3.16
599 602 3.971305 TCCCACCGATCCATATTACTTGT 59.029 43.478 0.00 0.00 0.00 3.16
600 603 4.039973 TCCCACCGATCCATATTACTTGTC 59.960 45.833 0.00 0.00 0.00 3.18
601 604 3.987868 CCACCGATCCATATTACTTGTCG 59.012 47.826 0.00 0.00 0.00 4.35
602 605 4.500887 CCACCGATCCATATTACTTGTCGT 60.501 45.833 0.00 0.00 0.00 4.34
603 606 5.047847 CACCGATCCATATTACTTGTCGTT 58.952 41.667 0.00 0.00 0.00 3.85
604 607 5.047847 ACCGATCCATATTACTTGTCGTTG 58.952 41.667 0.00 0.00 0.00 4.10
605 608 4.447724 CCGATCCATATTACTTGTCGTTGG 59.552 45.833 0.00 0.00 0.00 3.77
606 609 5.047847 CGATCCATATTACTTGTCGTTGGT 58.952 41.667 0.00 0.00 0.00 3.67
607 610 5.522460 CGATCCATATTACTTGTCGTTGGTT 59.478 40.000 0.00 0.00 0.00 3.67
608 611 6.036735 CGATCCATATTACTTGTCGTTGGTTT 59.963 38.462 0.00 0.00 0.00 3.27
609 612 7.223193 CGATCCATATTACTTGTCGTTGGTTTA 59.777 37.037 0.00 0.00 0.00 2.01
610 613 7.837202 TCCATATTACTTGTCGTTGGTTTAG 57.163 36.000 0.00 0.00 0.00 1.85
611 614 7.388437 TCCATATTACTTGTCGTTGGTTTAGT 58.612 34.615 0.00 0.00 0.00 2.24
612 615 8.530311 TCCATATTACTTGTCGTTGGTTTAGTA 58.470 33.333 0.00 0.00 0.00 1.82
613 616 8.598075 CCATATTACTTGTCGTTGGTTTAGTAC 58.402 37.037 0.00 0.00 0.00 2.73
614 617 9.142515 CATATTACTTGTCGTTGGTTTAGTACA 57.857 33.333 0.00 0.00 0.00 2.90
615 618 9.709495 ATATTACTTGTCGTTGGTTTAGTACAA 57.291 29.630 0.00 0.00 0.00 2.41
616 619 5.723492 ACTTGTCGTTGGTTTAGTACAAC 57.277 39.130 0.00 0.00 42.57 3.32
617 620 5.422145 ACTTGTCGTTGGTTTAGTACAACT 58.578 37.500 0.00 0.00 43.52 3.16
618 621 5.876460 ACTTGTCGTTGGTTTAGTACAACTT 59.124 36.000 0.00 0.00 43.52 2.66
619 622 6.372381 ACTTGTCGTTGGTTTAGTACAACTTT 59.628 34.615 0.00 0.00 43.52 2.66
620 623 7.548780 ACTTGTCGTTGGTTTAGTACAACTTTA 59.451 33.333 0.00 0.00 43.52 1.85
621 624 7.467557 TGTCGTTGGTTTAGTACAACTTTAG 57.532 36.000 0.00 0.00 43.52 1.85
622 625 7.041107 TGTCGTTGGTTTAGTACAACTTTAGT 58.959 34.615 0.00 0.00 43.52 2.24
623 626 8.194104 TGTCGTTGGTTTAGTACAACTTTAGTA 58.806 33.333 0.00 0.00 43.52 1.82
624 627 8.480066 GTCGTTGGTTTAGTACAACTTTAGTAC 58.520 37.037 0.00 0.00 43.52 2.73
625 628 8.194104 TCGTTGGTTTAGTACAACTTTAGTACA 58.806 33.333 6.30 0.00 43.52 2.90
626 629 8.816144 CGTTGGTTTAGTACAACTTTAGTACAA 58.184 33.333 6.30 0.00 43.52 2.41
629 632 9.889128 TGGTTTAGTACAACTTTAGTACAAAGT 57.111 29.630 14.04 14.04 43.24 2.66
646 649 6.837471 ACAAAGTTGTACTAAACCAACCAA 57.163 33.333 0.00 0.00 41.42 3.67
647 650 7.229581 ACAAAGTTGTACTAAACCAACCAAA 57.770 32.000 0.00 0.00 41.42 3.28
648 651 7.317390 ACAAAGTTGTACTAAACCAACCAAAG 58.683 34.615 0.00 0.00 41.42 2.77
649 652 7.039574 ACAAAGTTGTACTAAACCAACCAAAGT 60.040 33.333 0.00 0.00 41.42 2.66
650 653 7.470935 AAGTTGTACTAAACCAACCAAAGTT 57.529 32.000 0.00 0.00 41.42 2.66
663 666 5.278604 CAACCAAAGTTGTACTTAACCAGC 58.721 41.667 0.00 0.00 46.88 4.85
664 667 3.562557 ACCAAAGTTGTACTTAACCAGCG 59.437 43.478 0.00 0.00 37.47 5.18
665 668 3.810941 CCAAAGTTGTACTTAACCAGCGA 59.189 43.478 0.00 0.00 37.47 4.93
666 669 4.319261 CCAAAGTTGTACTTAACCAGCGAC 60.319 45.833 0.00 0.00 37.47 5.19
667 670 3.738830 AGTTGTACTTAACCAGCGACA 57.261 42.857 0.00 0.00 0.00 4.35
668 671 4.062677 AGTTGTACTTAACCAGCGACAA 57.937 40.909 0.00 0.00 31.94 3.18
669 672 4.056050 AGTTGTACTTAACCAGCGACAAG 58.944 43.478 0.00 0.00 34.05 3.16
670 673 3.738830 TGTACTTAACCAGCGACAAGT 57.261 42.857 0.00 0.00 35.50 3.16
671 674 4.852134 TGTACTTAACCAGCGACAAGTA 57.148 40.909 0.00 0.00 33.47 2.24
672 675 5.395682 TGTACTTAACCAGCGACAAGTAT 57.604 39.130 0.00 0.00 36.27 2.12
673 676 5.165676 TGTACTTAACCAGCGACAAGTATG 58.834 41.667 0.00 0.00 36.27 2.39
674 677 4.530710 ACTTAACCAGCGACAAGTATGA 57.469 40.909 0.00 0.00 29.67 2.15
675 678 4.243270 ACTTAACCAGCGACAAGTATGAC 58.757 43.478 0.00 0.00 29.67 3.06
676 679 2.094762 AACCAGCGACAAGTATGACC 57.905 50.000 0.00 0.00 0.00 4.02
677 680 0.108804 ACCAGCGACAAGTATGACCG 60.109 55.000 0.00 0.00 0.00 4.79
678 681 0.806102 CCAGCGACAAGTATGACCGG 60.806 60.000 0.00 0.00 0.00 5.28
679 682 0.806102 CAGCGACAAGTATGACCGGG 60.806 60.000 6.32 0.00 0.00 5.73
680 683 1.520787 GCGACAAGTATGACCGGGG 60.521 63.158 6.32 0.00 0.00 5.73
681 684 1.952102 GCGACAAGTATGACCGGGGA 61.952 60.000 6.32 0.00 0.00 4.81
682 685 0.102481 CGACAAGTATGACCGGGGAG 59.898 60.000 6.32 0.00 0.00 4.30
683 686 1.481871 GACAAGTATGACCGGGGAGA 58.518 55.000 6.32 0.00 0.00 3.71
684 687 1.409427 GACAAGTATGACCGGGGAGAG 59.591 57.143 6.32 0.00 0.00 3.20
685 688 1.273098 ACAAGTATGACCGGGGAGAGT 60.273 52.381 6.32 0.00 0.00 3.24
686 689 2.024655 ACAAGTATGACCGGGGAGAGTA 60.025 50.000 6.32 0.00 0.00 2.59
687 690 2.623889 CAAGTATGACCGGGGAGAGTAG 59.376 54.545 6.32 0.00 0.00 2.57
688 691 1.851653 AGTATGACCGGGGAGAGTAGT 59.148 52.381 6.32 0.00 0.00 2.73
689 692 3.051581 AGTATGACCGGGGAGAGTAGTA 58.948 50.000 6.32 0.00 0.00 1.82
690 693 3.656751 AGTATGACCGGGGAGAGTAGTAT 59.343 47.826 6.32 0.00 0.00 2.12
691 694 4.848660 AGTATGACCGGGGAGAGTAGTATA 59.151 45.833 6.32 0.00 0.00 1.47
692 695 4.949966 ATGACCGGGGAGAGTAGTATAT 57.050 45.455 6.32 0.00 0.00 0.86
693 696 6.675746 AGTATGACCGGGGAGAGTAGTATATA 59.324 42.308 6.32 0.00 0.00 0.86
694 697 5.171339 TGACCGGGGAGAGTAGTATATAC 57.829 47.826 6.32 4.60 0.00 1.47
695 698 4.848660 TGACCGGGGAGAGTAGTATATACT 59.151 45.833 19.07 19.07 40.24 2.12
696 699 6.025539 TGACCGGGGAGAGTAGTATATACTA 58.974 44.000 17.03 17.03 37.73 1.82
697 700 6.675746 TGACCGGGGAGAGTAGTATATACTAT 59.324 42.308 22.39 13.07 40.55 2.12
698 701 7.135591 ACCGGGGAGAGTAGTATATACTATC 57.864 44.000 22.39 18.96 40.55 2.08
1981 2355 6.449635 TCTAACAGTTTCAAACTTGCACAT 57.550 33.333 0.00 0.00 40.46 3.21
2207 2581 5.297569 AGTGTTAAGCTTCCTCTTCTTGT 57.702 39.130 0.00 0.00 0.00 3.16
2310 2684 9.702494 AATAGTTGGTTAGTAACAGTACAAGAC 57.298 33.333 14.81 0.83 32.12 3.01
2312 2686 7.558604 AGTTGGTTAGTAACAGTACAAGACAA 58.441 34.615 14.81 3.90 32.12 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 3.184382 TGTATCCAGACAGAAGGTGGA 57.816 47.619 0.00 0.00 44.48 4.02
95 98 3.443052 TCATACCGTGGAAGGTTAGGAA 58.557 45.455 0.00 0.00 43.00 3.36
96 99 3.028850 CTCATACCGTGGAAGGTTAGGA 58.971 50.000 0.00 0.00 43.00 2.94
97 100 2.764572 ACTCATACCGTGGAAGGTTAGG 59.235 50.000 0.00 0.00 43.00 2.69
98 101 4.159879 AGAACTCATACCGTGGAAGGTTAG 59.840 45.833 0.00 0.00 43.00 2.34
99 102 4.091549 AGAACTCATACCGTGGAAGGTTA 58.908 43.478 0.00 0.00 43.00 2.85
100 103 2.904434 AGAACTCATACCGTGGAAGGTT 59.096 45.455 0.00 0.00 43.00 3.50
102 105 4.262079 GGATAGAACTCATACCGTGGAAGG 60.262 50.000 0.00 0.00 37.30 3.46
103 106 4.341235 TGGATAGAACTCATACCGTGGAAG 59.659 45.833 0.00 0.00 0.00 3.46
104 107 4.283337 TGGATAGAACTCATACCGTGGAA 58.717 43.478 0.00 0.00 0.00 3.53
105 108 3.889538 CTGGATAGAACTCATACCGTGGA 59.110 47.826 0.00 0.00 0.00 4.02
106 109 3.637229 ACTGGATAGAACTCATACCGTGG 59.363 47.826 0.00 0.00 0.00 4.94
107 110 4.261656 GGACTGGATAGAACTCATACCGTG 60.262 50.000 0.00 0.00 0.00 4.94
108 111 3.890147 GGACTGGATAGAACTCATACCGT 59.110 47.826 0.00 0.00 0.00 4.83
109 112 3.256136 GGGACTGGATAGAACTCATACCG 59.744 52.174 0.00 0.00 0.00 4.02
110 113 4.039366 GTGGGACTGGATAGAACTCATACC 59.961 50.000 0.00 0.00 0.00 2.73
111 114 4.039366 GGTGGGACTGGATAGAACTCATAC 59.961 50.000 0.00 0.00 0.00 2.39
112 115 4.078571 AGGTGGGACTGGATAGAACTCATA 60.079 45.833 0.00 0.00 0.00 2.15
113 116 3.041946 GGTGGGACTGGATAGAACTCAT 58.958 50.000 0.00 0.00 0.00 2.90
114 117 2.044492 AGGTGGGACTGGATAGAACTCA 59.956 50.000 0.00 0.00 0.00 3.41
115 118 2.432510 CAGGTGGGACTGGATAGAACTC 59.567 54.545 0.00 0.00 34.84 3.01
116 119 2.472029 CAGGTGGGACTGGATAGAACT 58.528 52.381 0.00 0.00 34.84 3.01
117 120 2.990066 CAGGTGGGACTGGATAGAAC 57.010 55.000 0.00 0.00 34.84 3.01
134 137 2.768344 ATACTCCCCGTGGGCCAG 60.768 66.667 6.40 0.41 43.94 4.85
135 138 3.087253 CATACTCCCCGTGGGCCA 61.087 66.667 0.00 0.00 43.94 5.36
136 139 3.087906 ACATACTCCCCGTGGGCC 61.088 66.667 0.00 0.00 43.94 5.80
137 140 2.504519 GACATACTCCCCGTGGGC 59.495 66.667 0.00 0.00 43.94 5.36
138 141 1.324740 TTCGACATACTCCCCGTGGG 61.325 60.000 0.00 0.00 46.11 4.61
139 142 0.179119 GTTCGACATACTCCCCGTGG 60.179 60.000 0.00 0.00 0.00 4.94
140 143 0.179119 GGTTCGACATACTCCCCGTG 60.179 60.000 0.00 0.00 0.00 4.94
141 144 0.324091 AGGTTCGACATACTCCCCGT 60.324 55.000 0.00 0.00 0.00 5.28
142 145 1.607628 CTAGGTTCGACATACTCCCCG 59.392 57.143 0.00 0.00 0.00 5.73
143 146 2.941480 TCTAGGTTCGACATACTCCCC 58.059 52.381 0.00 0.00 0.00 4.81
144 147 3.698040 TGTTCTAGGTTCGACATACTCCC 59.302 47.826 0.00 0.00 0.00 4.30
145 148 4.978083 TGTTCTAGGTTCGACATACTCC 57.022 45.455 0.00 0.00 0.00 3.85
146 149 6.132791 TCATGTTCTAGGTTCGACATACTC 57.867 41.667 0.00 0.00 31.92 2.59
147 150 5.450688 GCTCATGTTCTAGGTTCGACATACT 60.451 44.000 0.00 0.00 31.92 2.12
148 151 4.740695 GCTCATGTTCTAGGTTCGACATAC 59.259 45.833 0.00 0.00 31.92 2.39
149 152 4.202121 GGCTCATGTTCTAGGTTCGACATA 60.202 45.833 0.00 0.00 31.92 2.29
150 153 3.430929 GGCTCATGTTCTAGGTTCGACAT 60.431 47.826 0.00 0.00 33.27 3.06
151 154 2.094182 GGCTCATGTTCTAGGTTCGACA 60.094 50.000 0.00 0.00 0.00 4.35
152 155 2.166664 AGGCTCATGTTCTAGGTTCGAC 59.833 50.000 0.00 0.00 0.00 4.20
153 156 2.166459 CAGGCTCATGTTCTAGGTTCGA 59.834 50.000 0.00 0.00 0.00 3.71
154 157 2.544685 CAGGCTCATGTTCTAGGTTCG 58.455 52.381 0.00 0.00 0.00 3.95
155 158 2.237392 ACCAGGCTCATGTTCTAGGTTC 59.763 50.000 0.00 0.00 0.00 3.62
156 159 2.269940 ACCAGGCTCATGTTCTAGGTT 58.730 47.619 0.00 0.00 0.00 3.50
157 160 1.958288 ACCAGGCTCATGTTCTAGGT 58.042 50.000 0.00 0.00 0.00 3.08
158 161 2.636830 CAACCAGGCTCATGTTCTAGG 58.363 52.381 0.00 0.00 0.00 3.02
159 162 2.237143 TCCAACCAGGCTCATGTTCTAG 59.763 50.000 0.00 0.00 37.29 2.43
160 163 2.027192 GTCCAACCAGGCTCATGTTCTA 60.027 50.000 0.00 0.00 37.29 2.10
161 164 1.067295 TCCAACCAGGCTCATGTTCT 58.933 50.000 0.00 0.00 37.29 3.01
162 165 1.168714 GTCCAACCAGGCTCATGTTC 58.831 55.000 0.00 0.00 37.29 3.18
163 166 0.478072 TGTCCAACCAGGCTCATGTT 59.522 50.000 0.00 0.00 37.29 2.71
164 167 0.700564 ATGTCCAACCAGGCTCATGT 59.299 50.000 0.00 0.00 37.29 3.21
165 168 1.100510 CATGTCCAACCAGGCTCATG 58.899 55.000 0.00 0.00 40.31 3.07
166 169 0.700564 ACATGTCCAACCAGGCTCAT 59.299 50.000 0.00 0.00 37.29 2.90
167 170 0.478072 AACATGTCCAACCAGGCTCA 59.522 50.000 0.00 0.00 37.29 4.26
168 171 2.489938 TAACATGTCCAACCAGGCTC 57.510 50.000 0.00 0.00 37.29 4.70
169 172 2.621407 CCATAACATGTCCAACCAGGCT 60.621 50.000 0.00 0.00 37.29 4.58
170 173 1.750778 CCATAACATGTCCAACCAGGC 59.249 52.381 0.00 0.00 37.29 4.85
171 174 3.364460 TCCATAACATGTCCAACCAGG 57.636 47.619 0.00 0.00 39.47 4.45
172 175 4.335416 ACTTCCATAACATGTCCAACCAG 58.665 43.478 0.00 0.00 0.00 4.00
173 176 4.380843 ACTTCCATAACATGTCCAACCA 57.619 40.909 0.00 0.00 0.00 3.67
174 177 5.250200 TGTACTTCCATAACATGTCCAACC 58.750 41.667 0.00 0.00 0.00 3.77
175 178 5.938125 ACTGTACTTCCATAACATGTCCAAC 59.062 40.000 0.00 0.00 0.00 3.77
176 179 6.121776 ACTGTACTTCCATAACATGTCCAA 57.878 37.500 0.00 0.00 0.00 3.53
177 180 5.755409 ACTGTACTTCCATAACATGTCCA 57.245 39.130 0.00 0.00 0.00 4.02
178 181 7.985184 TCAATACTGTACTTCCATAACATGTCC 59.015 37.037 0.00 0.00 0.00 4.02
179 182 8.942338 TCAATACTGTACTTCCATAACATGTC 57.058 34.615 0.00 0.00 0.00 3.06
183 186 9.489084 GCATATCAATACTGTACTTCCATAACA 57.511 33.333 0.00 0.00 0.00 2.41
184 187 8.648097 CGCATATCAATACTGTACTTCCATAAC 58.352 37.037 0.00 0.00 0.00 1.89
185 188 7.817478 CCGCATATCAATACTGTACTTCCATAA 59.183 37.037 0.00 0.00 0.00 1.90
186 189 7.039293 ACCGCATATCAATACTGTACTTCCATA 60.039 37.037 0.00 0.00 0.00 2.74
187 190 6.166279 CCGCATATCAATACTGTACTTCCAT 58.834 40.000 0.00 0.00 0.00 3.41
188 191 5.069914 ACCGCATATCAATACTGTACTTCCA 59.930 40.000 0.00 0.00 0.00 3.53
189 192 5.539048 ACCGCATATCAATACTGTACTTCC 58.461 41.667 0.00 0.00 0.00 3.46
190 193 5.634020 GGACCGCATATCAATACTGTACTTC 59.366 44.000 0.00 0.00 0.00 3.01
191 194 5.069914 TGGACCGCATATCAATACTGTACTT 59.930 40.000 0.00 0.00 0.00 2.24
192 195 4.587262 TGGACCGCATATCAATACTGTACT 59.413 41.667 0.00 0.00 0.00 2.73
193 196 4.878439 TGGACCGCATATCAATACTGTAC 58.122 43.478 0.00 0.00 0.00 2.90
194 197 5.738619 ATGGACCGCATATCAATACTGTA 57.261 39.130 0.00 0.00 0.00 2.74
195 198 4.623932 ATGGACCGCATATCAATACTGT 57.376 40.909 0.00 0.00 0.00 3.55
196 199 5.111989 CCTATGGACCGCATATCAATACTG 58.888 45.833 0.00 0.00 0.00 2.74
197 200 4.162320 CCCTATGGACCGCATATCAATACT 59.838 45.833 0.00 0.00 0.00 2.12
198 201 4.442706 CCCTATGGACCGCATATCAATAC 58.557 47.826 0.00 0.00 0.00 1.89
199 202 3.118408 GCCCTATGGACCGCATATCAATA 60.118 47.826 0.00 0.00 0.00 1.90
200 203 2.356125 GCCCTATGGACCGCATATCAAT 60.356 50.000 0.00 0.00 0.00 2.57
201 204 1.003118 GCCCTATGGACCGCATATCAA 59.997 52.381 0.00 0.00 0.00 2.57
202 205 0.613260 GCCCTATGGACCGCATATCA 59.387 55.000 0.00 0.00 0.00 2.15
203 206 0.613260 TGCCCTATGGACCGCATATC 59.387 55.000 0.00 0.00 0.00 1.63
204 207 0.615331 CTGCCCTATGGACCGCATAT 59.385 55.000 0.00 0.00 0.00 1.78
205 208 0.762842 ACTGCCCTATGGACCGCATA 60.763 55.000 0.00 0.00 0.00 3.14
206 209 2.072487 ACTGCCCTATGGACCGCAT 61.072 57.895 0.00 0.00 0.00 4.73
207 210 2.687200 ACTGCCCTATGGACCGCA 60.687 61.111 0.00 0.00 0.00 5.69
208 211 1.682451 TACACTGCCCTATGGACCGC 61.682 60.000 0.00 0.00 0.00 5.68
209 212 1.048601 ATACACTGCCCTATGGACCG 58.951 55.000 0.00 0.00 0.00 4.79
210 213 4.406003 CCTATATACACTGCCCTATGGACC 59.594 50.000 0.00 0.00 0.00 4.46
211 214 5.269991 TCCTATATACACTGCCCTATGGAC 58.730 45.833 0.00 0.00 0.00 4.02
212 215 5.255443 TCTCCTATATACACTGCCCTATGGA 59.745 44.000 0.00 0.00 0.00 3.41
213 216 5.519808 TCTCCTATATACACTGCCCTATGG 58.480 45.833 0.00 0.00 0.00 2.74
214 217 7.343057 TCAATCTCCTATATACACTGCCCTATG 59.657 40.741 0.00 0.00 0.00 2.23
215 218 7.343316 GTCAATCTCCTATATACACTGCCCTAT 59.657 40.741 0.00 0.00 0.00 2.57
216 219 6.663953 GTCAATCTCCTATATACACTGCCCTA 59.336 42.308 0.00 0.00 0.00 3.53
217 220 5.482175 GTCAATCTCCTATATACACTGCCCT 59.518 44.000 0.00 0.00 0.00 5.19
218 221 5.246203 TGTCAATCTCCTATATACACTGCCC 59.754 44.000 0.00 0.00 0.00 5.36
219 222 6.346477 TGTCAATCTCCTATATACACTGCC 57.654 41.667 0.00 0.00 0.00 4.85
220 223 6.815641 CCATGTCAATCTCCTATATACACTGC 59.184 42.308 0.00 0.00 0.00 4.40
221 224 7.326454 CCCATGTCAATCTCCTATATACACTG 58.674 42.308 0.00 0.00 0.00 3.66
222 225 6.070538 GCCCATGTCAATCTCCTATATACACT 60.071 42.308 0.00 0.00 0.00 3.55
223 226 6.109359 GCCCATGTCAATCTCCTATATACAC 58.891 44.000 0.00 0.00 0.00 2.90
224 227 5.784906 TGCCCATGTCAATCTCCTATATACA 59.215 40.000 0.00 0.00 0.00 2.29
225 228 6.109359 GTGCCCATGTCAATCTCCTATATAC 58.891 44.000 0.00 0.00 0.00 1.47
226 229 5.784906 TGTGCCCATGTCAATCTCCTATATA 59.215 40.000 0.00 0.00 0.00 0.86
227 230 4.598807 TGTGCCCATGTCAATCTCCTATAT 59.401 41.667 0.00 0.00 0.00 0.86
228 231 3.973305 TGTGCCCATGTCAATCTCCTATA 59.027 43.478 0.00 0.00 0.00 1.31
229 232 2.779430 TGTGCCCATGTCAATCTCCTAT 59.221 45.455 0.00 0.00 0.00 2.57
230 233 2.195727 TGTGCCCATGTCAATCTCCTA 58.804 47.619 0.00 0.00 0.00 2.94
231 234 0.994247 TGTGCCCATGTCAATCTCCT 59.006 50.000 0.00 0.00 0.00 3.69
232 235 1.838112 TTGTGCCCATGTCAATCTCC 58.162 50.000 0.00 0.00 0.00 3.71
233 236 2.821969 AGTTTGTGCCCATGTCAATCTC 59.178 45.455 0.00 0.00 0.00 2.75
234 237 2.821969 GAGTTTGTGCCCATGTCAATCT 59.178 45.455 0.00 0.00 0.00 2.40
235 238 2.821969 AGAGTTTGTGCCCATGTCAATC 59.178 45.455 0.00 0.00 0.00 2.67
236 239 2.880443 AGAGTTTGTGCCCATGTCAAT 58.120 42.857 0.00 0.00 0.00 2.57
237 240 2.363306 AGAGTTTGTGCCCATGTCAA 57.637 45.000 0.00 0.00 0.00 3.18
238 241 3.500448 TTAGAGTTTGTGCCCATGTCA 57.500 42.857 0.00 0.00 0.00 3.58
239 242 4.846779 TTTTAGAGTTTGTGCCCATGTC 57.153 40.909 0.00 0.00 0.00 3.06
258 261 9.669024 ACAATAATAGGTATTATGGGCCTTTTT 57.331 29.630 4.53 0.00 38.50 1.94
260 263 9.749340 GTACAATAATAGGTATTATGGGCCTTT 57.251 33.333 4.53 0.00 38.50 3.11
261 264 9.124104 AGTACAATAATAGGTATTATGGGCCTT 57.876 33.333 4.53 0.00 38.50 4.35
262 265 8.695663 AGTACAATAATAGGTATTATGGGCCT 57.304 34.615 4.53 0.00 38.50 5.19
263 266 8.769359 AGAGTACAATAATAGGTATTATGGGCC 58.231 37.037 0.00 0.00 38.50 5.80
285 288 9.702253 TGAGACTCAACTTATCCTATTAAGAGT 57.298 33.333 1.64 0.00 34.08 3.24
341 344 1.202627 GGTGCCTAGAGGAGCAGAATG 60.203 57.143 0.00 0.00 40.28 2.67
342 345 1.127343 GGTGCCTAGAGGAGCAGAAT 58.873 55.000 0.00 0.00 40.28 2.40
343 346 0.041833 AGGTGCCTAGAGGAGCAGAA 59.958 55.000 0.00 0.00 40.28 3.02
344 347 0.927029 TAGGTGCCTAGAGGAGCAGA 59.073 55.000 0.00 0.00 40.28 4.26
345 348 1.410882 GTTAGGTGCCTAGAGGAGCAG 59.589 57.143 0.00 0.00 40.28 4.24
346 349 1.273041 TGTTAGGTGCCTAGAGGAGCA 60.273 52.381 0.00 0.00 37.39 4.26
347 350 1.137282 GTGTTAGGTGCCTAGAGGAGC 59.863 57.143 0.00 0.00 37.39 4.70
348 351 2.428890 CAGTGTTAGGTGCCTAGAGGAG 59.571 54.545 0.00 0.00 37.39 3.69
349 352 2.042569 TCAGTGTTAGGTGCCTAGAGGA 59.957 50.000 0.00 0.00 37.39 3.71
350 353 2.428890 CTCAGTGTTAGGTGCCTAGAGG 59.571 54.545 0.00 0.00 38.53 3.69
351 354 2.159170 GCTCAGTGTTAGGTGCCTAGAG 60.159 54.545 0.00 3.26 0.00 2.43
352 355 1.825474 GCTCAGTGTTAGGTGCCTAGA 59.175 52.381 0.00 0.00 0.00 2.43
353 356 1.550524 TGCTCAGTGTTAGGTGCCTAG 59.449 52.381 0.00 0.00 0.00 3.02
354 357 1.639722 TGCTCAGTGTTAGGTGCCTA 58.360 50.000 0.00 0.00 0.00 3.93
355 358 0.764890 TTGCTCAGTGTTAGGTGCCT 59.235 50.000 0.00 0.00 0.00 4.75
356 359 1.826385 ATTGCTCAGTGTTAGGTGCC 58.174 50.000 0.00 0.00 0.00 5.01
357 360 2.813754 TGAATTGCTCAGTGTTAGGTGC 59.186 45.455 0.00 0.00 0.00 5.01
358 361 3.189287 GGTGAATTGCTCAGTGTTAGGTG 59.811 47.826 0.00 0.00 33.60 4.00
359 362 3.073062 AGGTGAATTGCTCAGTGTTAGGT 59.927 43.478 0.00 0.00 33.60 3.08
360 363 3.679389 AGGTGAATTGCTCAGTGTTAGG 58.321 45.455 0.00 0.00 33.60 2.69
361 364 4.573900 AGAGGTGAATTGCTCAGTGTTAG 58.426 43.478 0.00 0.00 33.60 2.34
362 365 4.623932 AGAGGTGAATTGCTCAGTGTTA 57.376 40.909 0.00 0.00 33.60 2.41
363 366 3.498774 AGAGGTGAATTGCTCAGTGTT 57.501 42.857 0.00 0.00 33.60 3.32
364 367 3.618507 GCTAGAGGTGAATTGCTCAGTGT 60.619 47.826 0.00 0.00 33.60 3.55
365 368 2.935201 GCTAGAGGTGAATTGCTCAGTG 59.065 50.000 0.00 0.00 33.60 3.66
366 369 2.093235 GGCTAGAGGTGAATTGCTCAGT 60.093 50.000 0.00 0.00 33.60 3.41
367 370 2.170187 AGGCTAGAGGTGAATTGCTCAG 59.830 50.000 0.00 0.00 33.60 3.35
368 371 2.191400 AGGCTAGAGGTGAATTGCTCA 58.809 47.619 0.00 0.00 0.00 4.26
369 372 2.998316 AGGCTAGAGGTGAATTGCTC 57.002 50.000 0.00 0.00 0.00 4.26
370 373 2.436173 GGTAGGCTAGAGGTGAATTGCT 59.564 50.000 0.00 0.00 0.00 3.91
371 374 2.485657 GGGTAGGCTAGAGGTGAATTGC 60.486 54.545 0.00 0.00 0.00 3.56
372 375 2.104963 GGGGTAGGCTAGAGGTGAATTG 59.895 54.545 0.00 0.00 0.00 2.32
373 376 2.293586 TGGGGTAGGCTAGAGGTGAATT 60.294 50.000 0.00 0.00 0.00 2.17
374 377 1.294068 TGGGGTAGGCTAGAGGTGAAT 59.706 52.381 0.00 0.00 0.00 2.57
375 378 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
376 379 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
377 380 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
378 381 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
379 382 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
380 383 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
381 384 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
382 385 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
383 386 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
384 387 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
393 396 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
394 397 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
395 398 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
396 399 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
397 400 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
398 401 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
399 402 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
400 403 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
401 404 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
402 405 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
403 406 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
404 407 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
405 408 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
406 409 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
407 410 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
408 411 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
409 412 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
410 413 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
411 414 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
412 415 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
413 416 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
414 417 5.347364 CCCTACAACAACAACAACAACAAAG 59.653 40.000 0.00 0.00 0.00 2.77
415 418 5.010719 TCCCTACAACAACAACAACAACAAA 59.989 36.000 0.00 0.00 0.00 2.83
416 419 4.523173 TCCCTACAACAACAACAACAACAA 59.477 37.500 0.00 0.00 0.00 2.83
417 420 4.079970 TCCCTACAACAACAACAACAACA 58.920 39.130 0.00 0.00 0.00 3.33
418 421 4.705337 TCCCTACAACAACAACAACAAC 57.295 40.909 0.00 0.00 0.00 3.32
419 422 4.098654 CCATCCCTACAACAACAACAACAA 59.901 41.667 0.00 0.00 0.00 2.83
420 423 3.634448 CCATCCCTACAACAACAACAACA 59.366 43.478 0.00 0.00 0.00 3.33
421 424 3.552068 GCCATCCCTACAACAACAACAAC 60.552 47.826 0.00 0.00 0.00 3.32
422 425 2.625790 GCCATCCCTACAACAACAACAA 59.374 45.455 0.00 0.00 0.00 2.83
423 426 2.158534 AGCCATCCCTACAACAACAACA 60.159 45.455 0.00 0.00 0.00 3.33
424 427 2.514803 AGCCATCCCTACAACAACAAC 58.485 47.619 0.00 0.00 0.00 3.32
425 428 2.969821 AGCCATCCCTACAACAACAA 57.030 45.000 0.00 0.00 0.00 2.83
426 429 2.640332 TGTAGCCATCCCTACAACAACA 59.360 45.455 0.00 0.00 43.32 3.33
427 430 3.343941 TGTAGCCATCCCTACAACAAC 57.656 47.619 0.00 0.00 43.32 3.32
433 436 4.021894 CACTCTGTATGTAGCCATCCCTAC 60.022 50.000 0.00 0.00 38.50 3.18
434 437 4.152647 CACTCTGTATGTAGCCATCCCTA 58.847 47.826 0.00 0.00 32.29 3.53
435 438 2.968574 CACTCTGTATGTAGCCATCCCT 59.031 50.000 0.00 0.00 32.29 4.20
436 439 2.548920 GCACTCTGTATGTAGCCATCCC 60.549 54.545 0.00 0.00 32.29 3.85
437 440 2.103094 TGCACTCTGTATGTAGCCATCC 59.897 50.000 0.00 0.00 32.29 3.51
438 441 3.068732 TCTGCACTCTGTATGTAGCCATC 59.931 47.826 0.00 0.00 32.29 3.51
439 442 3.033909 TCTGCACTCTGTATGTAGCCAT 58.966 45.455 0.00 0.00 34.97 4.40
440 443 2.456577 TCTGCACTCTGTATGTAGCCA 58.543 47.619 0.00 0.00 30.59 4.75
441 444 3.742433 ATCTGCACTCTGTATGTAGCC 57.258 47.619 0.00 0.00 30.59 3.93
442 445 3.247173 GCAATCTGCACTCTGTATGTAGC 59.753 47.826 0.00 0.00 44.26 3.58
456 459 9.817365 CATATTATTACACTAGTTGCAATCTGC 57.183 33.333 0.59 0.00 45.29 4.26
462 465 9.104965 GGACAACATATTATTACACTAGTTGCA 57.895 33.333 0.00 0.00 38.82 4.08
463 466 9.104965 TGGACAACATATTATTACACTAGTTGC 57.895 33.333 0.00 0.00 38.82 4.17
469 472 9.801873 GCAATTTGGACAACATATTATTACACT 57.198 29.630 0.00 0.00 30.89 3.55
470 473 9.579768 TGCAATTTGGACAACATATTATTACAC 57.420 29.630 0.00 0.00 30.89 2.90
476 479 9.311916 GCTAATTGCAATTTGGACAACATATTA 57.688 29.630 28.45 5.74 42.31 0.98
477 480 8.042515 AGCTAATTGCAATTTGGACAACATATT 58.957 29.630 28.45 3.78 45.94 1.28
478 481 7.558604 AGCTAATTGCAATTTGGACAACATAT 58.441 30.769 28.45 3.39 45.94 1.78
479 482 6.934056 AGCTAATTGCAATTTGGACAACATA 58.066 32.000 28.45 6.86 45.94 2.29
480 483 5.797051 AGCTAATTGCAATTTGGACAACAT 58.203 33.333 28.45 4.13 45.94 2.71
481 484 5.010922 AGAGCTAATTGCAATTTGGACAACA 59.989 36.000 28.45 8.27 45.94 3.33
482 485 5.473039 AGAGCTAATTGCAATTTGGACAAC 58.527 37.500 28.45 13.48 45.94 3.32
483 486 5.726980 AGAGCTAATTGCAATTTGGACAA 57.273 34.783 28.45 9.70 45.94 3.18
484 487 6.832520 TTAGAGCTAATTGCAATTTGGACA 57.167 33.333 28.45 10.41 45.94 4.02
485 488 8.435430 GTTTTTAGAGCTAATTGCAATTTGGAC 58.565 33.333 28.45 17.27 45.94 4.02
486 489 8.367156 AGTTTTTAGAGCTAATTGCAATTTGGA 58.633 29.630 28.45 11.14 45.94 3.53
487 490 8.538409 AGTTTTTAGAGCTAATTGCAATTTGG 57.462 30.769 28.45 21.09 45.94 3.28
506 509 9.938280 GCCATCCCTACTTTTATTTTAGTTTTT 57.062 29.630 0.00 0.00 0.00 1.94
507 510 9.321532 AGCCATCCCTACTTTTATTTTAGTTTT 57.678 29.630 0.00 0.00 0.00 2.43
508 511 8.895141 AGCCATCCCTACTTTTATTTTAGTTT 57.105 30.769 0.00 0.00 0.00 2.66
509 512 9.404848 GTAGCCATCCCTACTTTTATTTTAGTT 57.595 33.333 0.00 0.00 35.82 2.24
510 513 8.779031 AGTAGCCATCCCTACTTTTATTTTAGT 58.221 33.333 0.00 0.00 44.13 2.24
522 525 5.093849 TGTTTGTAAGTAGCCATCCCTAC 57.906 43.478 0.00 0.00 38.34 3.18
523 526 5.493809 GTTGTTTGTAAGTAGCCATCCCTA 58.506 41.667 0.00 0.00 0.00 3.53
524 527 4.332828 GTTGTTTGTAAGTAGCCATCCCT 58.667 43.478 0.00 0.00 0.00 4.20
525 528 3.442625 GGTTGTTTGTAAGTAGCCATCCC 59.557 47.826 0.00 0.00 0.00 3.85
526 529 4.332828 AGGTTGTTTGTAAGTAGCCATCC 58.667 43.478 0.00 0.00 0.00 3.51
527 530 5.959618 AAGGTTGTTTGTAAGTAGCCATC 57.040 39.130 0.00 0.00 0.00 3.51
528 531 6.724893 AAAAGGTTGTTTGTAAGTAGCCAT 57.275 33.333 0.00 0.00 0.00 4.40
529 532 6.071278 ACAAAAAGGTTGTTTGTAAGTAGCCA 60.071 34.615 0.86 0.00 45.11 4.75
530 533 6.334989 ACAAAAAGGTTGTTTGTAAGTAGCC 58.665 36.000 0.86 0.00 45.11 3.93
541 544 9.877178 TGACATATTTTGTACAAAAAGGTTGTT 57.123 25.926 31.40 18.49 42.71 2.83
542 545 9.877178 TTGACATATTTTGTACAAAAAGGTTGT 57.123 25.926 31.40 27.75 42.71 3.32
555 558 9.747898 TGGGAGTACTAAATTGACATATTTTGT 57.252 29.630 0.00 11.53 42.79 2.83
557 560 9.185680 GGTGGGAGTACTAAATTGACATATTTT 57.814 33.333 0.00 0.00 0.00 1.82
558 561 7.497909 CGGTGGGAGTACTAAATTGACATATTT 59.502 37.037 0.00 0.00 0.00 1.40
559 562 6.990349 CGGTGGGAGTACTAAATTGACATATT 59.010 38.462 0.00 0.00 0.00 1.28
560 563 6.325545 TCGGTGGGAGTACTAAATTGACATAT 59.674 38.462 0.00 0.00 0.00 1.78
561 564 5.657745 TCGGTGGGAGTACTAAATTGACATA 59.342 40.000 0.00 0.00 0.00 2.29
562 565 4.468510 TCGGTGGGAGTACTAAATTGACAT 59.531 41.667 0.00 0.00 0.00 3.06
563 566 3.833650 TCGGTGGGAGTACTAAATTGACA 59.166 43.478 0.00 0.00 0.00 3.58
564 567 4.460948 TCGGTGGGAGTACTAAATTGAC 57.539 45.455 0.00 0.00 0.00 3.18
565 568 4.100498 GGATCGGTGGGAGTACTAAATTGA 59.900 45.833 0.00 0.00 0.00 2.57
566 569 4.141801 TGGATCGGTGGGAGTACTAAATTG 60.142 45.833 0.00 0.00 0.00 2.32
567 570 4.035112 TGGATCGGTGGGAGTACTAAATT 58.965 43.478 0.00 0.00 0.00 1.82
568 571 3.649843 TGGATCGGTGGGAGTACTAAAT 58.350 45.455 0.00 0.00 0.00 1.40
569 572 3.104519 TGGATCGGTGGGAGTACTAAA 57.895 47.619 0.00 0.00 0.00 1.85
570 573 2.832643 TGGATCGGTGGGAGTACTAA 57.167 50.000 0.00 0.00 0.00 2.24
571 574 4.669866 ATATGGATCGGTGGGAGTACTA 57.330 45.455 0.00 0.00 0.00 1.82
572 575 3.544698 ATATGGATCGGTGGGAGTACT 57.455 47.619 0.00 0.00 0.00 2.73
573 576 4.771054 AGTAATATGGATCGGTGGGAGTAC 59.229 45.833 0.00 0.00 0.00 2.73
574 577 5.006896 AGTAATATGGATCGGTGGGAGTA 57.993 43.478 0.00 0.00 0.00 2.59
575 578 3.858135 AGTAATATGGATCGGTGGGAGT 58.142 45.455 0.00 0.00 0.00 3.85
576 579 4.040461 ACAAGTAATATGGATCGGTGGGAG 59.960 45.833 0.00 0.00 0.00 4.30
577 580 3.971305 ACAAGTAATATGGATCGGTGGGA 59.029 43.478 0.00 0.00 0.00 4.37
578 581 4.315803 GACAAGTAATATGGATCGGTGGG 58.684 47.826 0.00 0.00 0.00 4.61
579 582 3.987868 CGACAAGTAATATGGATCGGTGG 59.012 47.826 0.00 0.00 0.00 4.61
580 583 4.617959 ACGACAAGTAATATGGATCGGTG 58.382 43.478 0.00 0.00 32.56 4.94
581 584 4.931661 ACGACAAGTAATATGGATCGGT 57.068 40.909 0.00 0.00 32.56 4.69
582 585 4.447724 CCAACGACAAGTAATATGGATCGG 59.552 45.833 0.00 0.00 30.42 4.18
583 586 5.047847 ACCAACGACAAGTAATATGGATCG 58.952 41.667 0.00 0.00 32.67 3.69
584 587 6.920569 AACCAACGACAAGTAATATGGATC 57.079 37.500 0.00 0.00 32.67 3.36
585 588 8.044908 ACTAAACCAACGACAAGTAATATGGAT 58.955 33.333 0.00 0.00 32.67 3.41
586 589 7.388437 ACTAAACCAACGACAAGTAATATGGA 58.612 34.615 0.00 0.00 32.67 3.41
587 590 7.605410 ACTAAACCAACGACAAGTAATATGG 57.395 36.000 0.00 0.00 34.12 2.74
588 591 9.142515 TGTACTAAACCAACGACAAGTAATATG 57.857 33.333 0.00 0.00 0.00 1.78
589 592 9.709495 TTGTACTAAACCAACGACAAGTAATAT 57.291 29.630 0.00 0.00 0.00 1.28
590 593 8.977505 GTTGTACTAAACCAACGACAAGTAATA 58.022 33.333 0.00 0.00 32.49 0.98
591 594 7.712205 AGTTGTACTAAACCAACGACAAGTAAT 59.288 33.333 0.00 0.00 44.35 1.89
592 595 7.041107 AGTTGTACTAAACCAACGACAAGTAA 58.959 34.615 0.00 0.00 44.35 2.24
593 596 6.572519 AGTTGTACTAAACCAACGACAAGTA 58.427 36.000 0.00 0.00 44.35 2.24
594 597 5.422145 AGTTGTACTAAACCAACGACAAGT 58.578 37.500 0.00 0.00 44.35 3.16
595 598 5.978934 AGTTGTACTAAACCAACGACAAG 57.021 39.130 0.00 0.00 44.35 3.16
596 599 6.740411 AAAGTTGTACTAAACCAACGACAA 57.260 33.333 0.00 0.00 44.35 3.18
597 600 7.041107 ACTAAAGTTGTACTAAACCAACGACA 58.959 34.615 0.00 0.00 44.35 4.35
598 601 7.468922 ACTAAAGTTGTACTAAACCAACGAC 57.531 36.000 0.00 0.00 44.35 4.34
599 602 8.194104 TGTACTAAAGTTGTACTAAACCAACGA 58.806 33.333 0.00 0.00 44.35 3.85
600 603 8.351495 TGTACTAAAGTTGTACTAAACCAACG 57.649 34.615 0.00 0.00 44.35 4.10
603 606 9.889128 ACTTTGTACTAAAGTTGTACTAAACCA 57.111 29.630 14.04 0.00 40.44 3.67
622 625 7.934855 TTGGTTGGTTTAGTACAACTTTGTA 57.065 32.000 7.38 0.00 44.71 2.41
623 626 6.837471 TTGGTTGGTTTAGTACAACTTTGT 57.163 33.333 7.38 0.00 44.71 2.83
624 627 7.317390 ACTTTGGTTGGTTTAGTACAACTTTG 58.683 34.615 7.38 0.00 44.71 2.77
625 628 7.470935 ACTTTGGTTGGTTTAGTACAACTTT 57.529 32.000 7.38 0.00 44.71 2.66
626 629 7.317390 CAACTTTGGTTGGTTTAGTACAACTT 58.683 34.615 7.38 0.00 46.37 2.66
627 630 6.859017 CAACTTTGGTTGGTTTAGTACAACT 58.141 36.000 7.38 0.00 46.37 3.16
641 644 4.035909 CGCTGGTTAAGTACAACTTTGGTT 59.964 41.667 0.00 0.00 39.51 3.67
642 645 3.562557 CGCTGGTTAAGTACAACTTTGGT 59.437 43.478 0.00 0.00 39.51 3.67
643 646 3.810941 TCGCTGGTTAAGTACAACTTTGG 59.189 43.478 0.00 0.00 39.51 3.28
644 647 4.271533 TGTCGCTGGTTAAGTACAACTTTG 59.728 41.667 0.00 0.00 39.51 2.77
645 648 4.444536 TGTCGCTGGTTAAGTACAACTTT 58.555 39.130 0.00 0.00 39.51 2.66
646 649 4.062677 TGTCGCTGGTTAAGTACAACTT 57.937 40.909 0.00 0.00 41.97 2.66
647 650 3.738830 TGTCGCTGGTTAAGTACAACT 57.261 42.857 0.00 0.00 0.00 3.16
648 651 3.805971 ACTTGTCGCTGGTTAAGTACAAC 59.194 43.478 0.00 0.00 33.25 3.32
649 652 4.062677 ACTTGTCGCTGGTTAAGTACAA 57.937 40.909 0.00 0.00 34.64 2.41
650 653 3.738830 ACTTGTCGCTGGTTAAGTACA 57.261 42.857 0.00 0.00 32.05 2.90
651 654 5.287992 GTCATACTTGTCGCTGGTTAAGTAC 59.712 44.000 0.00 0.00 38.14 2.73
652 655 5.404946 GTCATACTTGTCGCTGGTTAAGTA 58.595 41.667 0.00 0.00 39.22 2.24
653 656 4.243270 GTCATACTTGTCGCTGGTTAAGT 58.757 43.478 0.00 0.00 37.21 2.24
654 657 3.617263 GGTCATACTTGTCGCTGGTTAAG 59.383 47.826 0.00 0.00 0.00 1.85
655 658 3.592059 GGTCATACTTGTCGCTGGTTAA 58.408 45.455 0.00 0.00 0.00 2.01
656 659 2.416296 CGGTCATACTTGTCGCTGGTTA 60.416 50.000 0.00 0.00 0.00 2.85
657 660 1.671850 CGGTCATACTTGTCGCTGGTT 60.672 52.381 0.00 0.00 0.00 3.67
658 661 0.108804 CGGTCATACTTGTCGCTGGT 60.109 55.000 0.00 0.00 0.00 4.00
659 662 0.806102 CCGGTCATACTTGTCGCTGG 60.806 60.000 0.00 0.00 0.00 4.85
660 663 0.806102 CCCGGTCATACTTGTCGCTG 60.806 60.000 0.00 0.00 0.00 5.18
661 664 1.515954 CCCGGTCATACTTGTCGCT 59.484 57.895 0.00 0.00 0.00 4.93
662 665 1.520787 CCCCGGTCATACTTGTCGC 60.521 63.158 0.00 0.00 0.00 5.19
663 666 0.102481 CTCCCCGGTCATACTTGTCG 59.898 60.000 0.00 0.00 0.00 4.35
664 667 1.409427 CTCTCCCCGGTCATACTTGTC 59.591 57.143 0.00 0.00 0.00 3.18
665 668 1.273098 ACTCTCCCCGGTCATACTTGT 60.273 52.381 0.00 0.00 0.00 3.16
666 669 1.486211 ACTCTCCCCGGTCATACTTG 58.514 55.000 0.00 0.00 0.00 3.16
667 670 2.244252 ACTACTCTCCCCGGTCATACTT 59.756 50.000 0.00 0.00 0.00 2.24
668 671 1.851653 ACTACTCTCCCCGGTCATACT 59.148 52.381 0.00 0.00 0.00 2.12
669 672 2.361643 ACTACTCTCCCCGGTCATAC 57.638 55.000 0.00 0.00 0.00 2.39
670 673 6.675746 AGTATATACTACTCTCCCCGGTCATA 59.324 42.308 13.88 0.00 34.13 2.15
671 674 4.949966 ATATACTACTCTCCCCGGTCAT 57.050 45.455 0.00 0.00 0.00 3.06
672 675 4.848660 AGTATATACTACTCTCCCCGGTCA 59.151 45.833 13.88 0.00 34.13 4.02
673 676 5.434182 AGTATATACTACTCTCCCCGGTC 57.566 47.826 13.88 0.00 34.13 4.79
674 677 6.675746 TGATAGTATATACTACTCTCCCCGGT 59.324 42.308 22.07 5.14 41.18 5.28
675 678 7.134362 TGATAGTATATACTACTCTCCCCGG 57.866 44.000 22.07 0.00 41.18 5.73
676 679 7.662258 CCATGATAGTATATACTACTCTCCCCG 59.338 44.444 22.07 9.02 41.18 5.73
677 680 7.945664 CCCATGATAGTATATACTACTCTCCCC 59.054 44.444 22.07 8.39 41.18 4.81
678 681 8.725256 TCCCATGATAGTATATACTACTCTCCC 58.275 40.741 22.07 9.75 41.18 4.30
679 682 9.563748 GTCCCATGATAGTATATACTACTCTCC 57.436 40.741 22.07 11.14 41.18 3.71
686 689 9.560860 TGGAATTGTCCCATGATAGTATATACT 57.439 33.333 19.07 19.07 44.23 2.12
689 692 9.911788 GAATGGAATTGTCCCATGATAGTATAT 57.088 33.333 0.00 0.00 43.20 0.86
690 693 9.116080 AGAATGGAATTGTCCCATGATAGTATA 57.884 33.333 0.00 0.00 43.20 1.47
691 694 7.993416 AGAATGGAATTGTCCCATGATAGTAT 58.007 34.615 0.00 0.00 43.20 2.12
692 695 7.392766 AGAATGGAATTGTCCCATGATAGTA 57.607 36.000 0.00 0.00 43.20 1.82
693 696 6.271585 AGAATGGAATTGTCCCATGATAGT 57.728 37.500 0.00 0.00 43.20 2.12
694 697 6.516194 GCAAGAATGGAATTGTCCCATGATAG 60.516 42.308 0.00 0.00 43.20 2.08
695 698 5.302568 GCAAGAATGGAATTGTCCCATGATA 59.697 40.000 0.00 0.00 43.20 2.15
696 699 4.100498 GCAAGAATGGAATTGTCCCATGAT 59.900 41.667 0.00 0.00 43.20 2.45
697 700 3.448301 GCAAGAATGGAATTGTCCCATGA 59.552 43.478 0.00 0.00 43.20 3.07
698 701 3.431207 GGCAAGAATGGAATTGTCCCATG 60.431 47.826 0.00 0.00 43.20 3.66
2207 2581 3.748083 GAGCATCTCCAATGGCTATCAA 58.252 45.455 0.00 0.00 36.59 2.57
2310 2684 2.024414 GCTGGTTGTAGGCCCTATTTG 58.976 52.381 0.00 0.00 0.00 2.32
2312 2686 1.596496 AGCTGGTTGTAGGCCCTATT 58.404 50.000 0.00 0.00 0.00 1.73
2508 4680 9.072294 GCAATTGACAACTTGTATGGTAAATAC 57.928 33.333 10.34 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.