Multiple sequence alignment - TraesCS4B01G092800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G092800 chr4B 100.000 2672 0 0 1 2672 95371670 95368999 0.000000e+00 4935.0
1 TraesCS4B01G092800 chr4B 89.789 284 29 0 2385 2668 95314978 95315261 5.440000e-97 364.0
2 TraesCS4B01G092800 chr4B 80.208 192 34 4 2082 2272 545449640 545449828 9.970000e-30 141.0
3 TraesCS4B01G092800 chr4A 89.785 1909 132 25 458 2335 530936488 530934612 0.000000e+00 2386.0
4 TraesCS4B01G092800 chr4A 86.934 1370 99 25 212 1529 531117417 531118758 0.000000e+00 1465.0
5 TraesCS4B01G092800 chr4D 92.826 1157 58 13 691 1838 65070444 65069304 0.000000e+00 1653.0
6 TraesCS4B01G092800 chr4D 79.050 463 76 15 1882 2325 65069035 65068575 5.590000e-77 298.0
7 TraesCS4B01G092800 chr4D 85.992 257 19 2 458 697 65071931 65071675 2.640000e-65 259.0
8 TraesCS4B01G092800 chr2B 97.260 146 4 0 1 146 743565158 743565303 5.710000e-62 248.0
9 TraesCS4B01G092800 chr5B 97.241 145 4 0 1 145 112375499 112375355 2.050000e-61 246.0
10 TraesCS4B01G092800 chr5B 80.500 200 34 5 2090 2287 466648903 466649099 5.960000e-32 148.0
11 TraesCS4B01G092800 chr5B 94.444 36 2 0 2014 2049 101414826 101414791 3.720000e-04 56.5
12 TraesCS4B01G092800 chr7B 96.599 147 5 0 1 147 648055819 648055673 7.390000e-61 244.0
13 TraesCS4B01G092800 chr7B 92.727 165 9 3 1 162 301590644 301590808 4.450000e-58 235.0
14 TraesCS4B01G092800 chr7B 94.737 152 6 2 1 152 706059495 706059346 4.450000e-58 235.0
15 TraesCS4B01G092800 chr7B 79.720 143 26 3 2332 2472 31439680 31439821 1.690000e-17 100.0
16 TraesCS4B01G092800 chr7B 79.021 143 27 3 2332 2472 29825291 29825432 7.870000e-16 95.3
17 TraesCS4B01G092800 chr7B 79.021 143 27 3 2332 2472 30612375 30612516 7.870000e-16 95.3
18 TraesCS4B01G092800 chr7B 79.021 143 27 3 2332 2472 30686854 30686995 7.870000e-16 95.3
19 TraesCS4B01G092800 chr1B 96.599 147 5 0 1 147 530868066 530868212 7.390000e-61 244.0
20 TraesCS4B01G092800 chr1B 96.552 145 5 0 1 145 123343911 123344055 9.560000e-60 241.0
21 TraesCS4B01G092800 chr1B 80.858 303 48 9 2040 2335 161986947 161987246 2.070000e-56 230.0
22 TraesCS4B01G092800 chr1B 79.897 194 37 2 2123 2316 397660085 397659894 9.970000e-30 141.0
23 TraesCS4B01G092800 chr1B 75.445 281 59 8 2023 2298 58578574 58578299 7.760000e-26 128.0
24 TraesCS4B01G092800 chr2A 96.552 145 5 0 1 145 141901102 141901246 9.560000e-60 241.0
25 TraesCS4B01G092800 chr2A 72.703 381 82 19 1968 2335 769520920 769520549 1.010000e-19 108.0
26 TraesCS4B01G092800 chr6D 94.737 152 7 1 1 151 35626956 35627107 4.450000e-58 235.0
27 TraesCS4B01G092800 chr1D 81.633 294 42 11 2049 2335 104576806 104576518 1.600000e-57 233.0
28 TraesCS4B01G092800 chr5A 76.976 291 56 10 2014 2298 491236440 491236725 3.560000e-34 156.0
29 TraesCS4B01G092800 chr3A 75.319 235 54 3 2064 2296 550273856 550273624 2.810000e-20 110.0
30 TraesCS4B01G092800 chr7A 77.622 143 25 6 2332 2472 84243712 84243849 2.210000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G092800 chr4B 95368999 95371670 2671 True 4935.000000 4935 100.000 1 2672 1 chr4B.!!$R1 2671
1 TraesCS4B01G092800 chr4A 530934612 530936488 1876 True 2386.000000 2386 89.785 458 2335 1 chr4A.!!$R1 1877
2 TraesCS4B01G092800 chr4A 531117417 531118758 1341 False 1465.000000 1465 86.934 212 1529 1 chr4A.!!$F1 1317
3 TraesCS4B01G092800 chr4D 65068575 65071931 3356 True 736.666667 1653 85.956 458 2325 3 chr4D.!!$R1 1867

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 449 0.030504 CGTGCCATGCTTGTTTGACA 59.969 50.0 0.0 0.0 0.0 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2433 3976 0.0293 CAACCGTGCTTGGTGAGTTG 59.971 55.0 1.02 0.0 42.89 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 7.898014 ATTTTGAAAGTAGGAACTCCAAAGT 57.102 32.000 0.00 0.00 41.75 2.66
45 46 7.712204 TTTGAAAGTAGGAACTCCAAAGTTT 57.288 32.000 0.00 1.68 45.80 2.66
46 47 8.810990 TTTGAAAGTAGGAACTCCAAAGTTTA 57.189 30.769 0.00 0.00 45.80 2.01
47 48 8.990163 TTGAAAGTAGGAACTCCAAAGTTTAT 57.010 30.769 0.00 0.00 45.80 1.40
48 49 8.391075 TGAAAGTAGGAACTCCAAAGTTTATG 57.609 34.615 0.00 0.00 45.80 1.90
49 50 7.996644 TGAAAGTAGGAACTCCAAAGTTTATGT 59.003 33.333 0.00 0.00 45.80 2.29
50 51 8.762481 AAAGTAGGAACTCCAAAGTTTATGTT 57.238 30.769 0.00 0.00 45.80 2.71
51 52 7.745620 AGTAGGAACTCCAAAGTTTATGTTG 57.254 36.000 0.00 0.00 45.80 3.33
52 53 6.715264 AGTAGGAACTCCAAAGTTTATGTTGG 59.285 38.462 0.00 0.00 45.80 3.77
53 54 5.454966 AGGAACTCCAAAGTTTATGTTGGT 58.545 37.500 0.00 0.00 45.80 3.67
54 55 6.607019 AGGAACTCCAAAGTTTATGTTGGTA 58.393 36.000 0.00 0.00 45.80 3.25
55 56 7.238710 AGGAACTCCAAAGTTTATGTTGGTAT 58.761 34.615 0.00 0.00 45.80 2.73
56 57 8.387813 AGGAACTCCAAAGTTTATGTTGGTATA 58.612 33.333 0.00 0.00 45.80 1.47
57 58 9.185680 GGAACTCCAAAGTTTATGTTGGTATAT 57.814 33.333 2.58 0.00 45.80 0.86
91 92 8.777578 ATATATGACTTGTACTAGGTTGGTCA 57.222 34.615 9.17 4.36 36.80 4.02
92 93 5.818678 ATGACTTGTACTAGGTTGGTCAA 57.181 39.130 9.17 0.00 36.16 3.18
93 94 5.617528 TGACTTGTACTAGGTTGGTCAAA 57.382 39.130 9.17 0.00 30.81 2.69
94 95 6.182507 TGACTTGTACTAGGTTGGTCAAAT 57.817 37.500 9.17 0.00 30.81 2.32
95 96 6.597562 TGACTTGTACTAGGTTGGTCAAATT 58.402 36.000 9.17 0.00 30.81 1.82
96 97 6.485313 TGACTTGTACTAGGTTGGTCAAATTG 59.515 38.462 9.17 0.00 30.81 2.32
97 98 6.597562 ACTTGTACTAGGTTGGTCAAATTGA 58.402 36.000 9.17 0.00 0.00 2.57
98 99 6.485648 ACTTGTACTAGGTTGGTCAAATTGAC 59.514 38.462 17.16 17.16 46.23 3.18
108 109 2.629051 GTCAAATTGACGACCTAGGGG 58.371 52.381 14.81 7.16 37.67 4.79
109 110 2.027469 GTCAAATTGACGACCTAGGGGT 60.027 50.000 14.81 10.74 42.37 4.95
110 111 3.196254 GTCAAATTGACGACCTAGGGGTA 59.804 47.826 14.81 0.00 40.90 3.69
111 112 4.916984 GTCAAATTGACGACCTAGGGGTAC 60.917 50.000 14.81 2.61 40.90 3.34
125 126 4.781959 GTACGCGCACGCCCTGTA 62.782 66.667 5.73 3.39 45.53 2.74
126 127 4.053526 TACGCGCACGCCCTGTAA 62.054 61.111 5.73 0.00 45.53 2.41
127 128 3.570621 TACGCGCACGCCCTGTAAA 62.571 57.895 5.73 0.00 45.53 2.01
128 129 4.439472 CGCGCACGCCCTGTAAAC 62.439 66.667 8.75 0.00 37.98 2.01
129 130 4.097863 GCGCACGCCCTGTAAACC 62.098 66.667 0.30 0.00 34.56 3.27
130 131 3.784412 CGCACGCCCTGTAAACCG 61.784 66.667 0.00 0.00 0.00 4.44
131 132 2.357760 GCACGCCCTGTAAACCGA 60.358 61.111 0.00 0.00 0.00 4.69
132 133 2.388232 GCACGCCCTGTAAACCGAG 61.388 63.158 0.00 0.00 0.00 4.63
133 134 1.290955 CACGCCCTGTAAACCGAGA 59.709 57.895 0.00 0.00 0.00 4.04
134 135 0.736325 CACGCCCTGTAAACCGAGAG 60.736 60.000 0.00 0.00 0.00 3.20
135 136 0.896940 ACGCCCTGTAAACCGAGAGA 60.897 55.000 0.00 0.00 0.00 3.10
136 137 0.179134 CGCCCTGTAAACCGAGAGAG 60.179 60.000 0.00 0.00 0.00 3.20
137 138 1.183549 GCCCTGTAAACCGAGAGAGA 58.816 55.000 0.00 0.00 0.00 3.10
138 139 1.135333 GCCCTGTAAACCGAGAGAGAG 59.865 57.143 0.00 0.00 0.00 3.20
139 140 1.751924 CCCTGTAAACCGAGAGAGAGG 59.248 57.143 0.00 0.00 0.00 3.69
140 141 2.448453 CCTGTAAACCGAGAGAGAGGT 58.552 52.381 0.00 0.00 43.68 3.85
141 142 3.618351 CCTGTAAACCGAGAGAGAGGTA 58.382 50.000 0.00 0.00 40.37 3.08
142 143 3.628487 CCTGTAAACCGAGAGAGAGGTAG 59.372 52.174 0.00 0.00 40.37 3.18
143 144 4.263435 CTGTAAACCGAGAGAGAGGTAGT 58.737 47.826 0.00 0.00 40.37 2.73
144 145 5.426504 CTGTAAACCGAGAGAGAGGTAGTA 58.573 45.833 0.00 0.00 40.37 1.82
145 146 5.181748 TGTAAACCGAGAGAGAGGTAGTAC 58.818 45.833 0.00 0.00 40.37 2.73
146 147 4.573021 AAACCGAGAGAGAGGTAGTACT 57.427 45.455 0.00 0.00 40.37 2.73
147 148 3.547054 ACCGAGAGAGAGGTAGTACTG 57.453 52.381 5.39 0.00 39.30 2.74
148 149 3.106054 ACCGAGAGAGAGGTAGTACTGA 58.894 50.000 5.39 0.00 39.30 3.41
149 150 3.518705 ACCGAGAGAGAGGTAGTACTGAA 59.481 47.826 5.39 0.00 39.30 3.02
150 151 4.164604 ACCGAGAGAGAGGTAGTACTGAAT 59.835 45.833 5.39 0.00 39.30 2.57
151 152 4.513692 CCGAGAGAGAGGTAGTACTGAATG 59.486 50.000 5.39 0.00 0.00 2.67
152 153 5.361427 CGAGAGAGAGGTAGTACTGAATGA 58.639 45.833 5.39 0.00 0.00 2.57
153 154 5.995282 CGAGAGAGAGGTAGTACTGAATGAT 59.005 44.000 5.39 0.00 0.00 2.45
154 155 6.073276 CGAGAGAGAGGTAGTACTGAATGATG 60.073 46.154 5.39 0.00 0.00 3.07
155 156 6.668645 AGAGAGAGGTAGTACTGAATGATGT 58.331 40.000 5.39 0.00 0.00 3.06
156 157 7.807198 AGAGAGAGGTAGTACTGAATGATGTA 58.193 38.462 5.39 0.00 0.00 2.29
157 158 8.275758 AGAGAGAGGTAGTACTGAATGATGTAA 58.724 37.037 5.39 0.00 0.00 2.41
158 159 8.228035 AGAGAGGTAGTACTGAATGATGTAAC 57.772 38.462 5.39 0.00 0.00 2.50
159 160 8.056400 AGAGAGGTAGTACTGAATGATGTAACT 58.944 37.037 5.39 0.00 0.00 2.24
160 161 8.228035 AGAGGTAGTACTGAATGATGTAACTC 57.772 38.462 5.39 0.00 0.00 3.01
161 162 8.056400 AGAGGTAGTACTGAATGATGTAACTCT 58.944 37.037 5.39 1.80 0.00 3.24
162 163 9.339850 GAGGTAGTACTGAATGATGTAACTCTA 57.660 37.037 5.39 0.00 0.00 2.43
163 164 9.869667 AGGTAGTACTGAATGATGTAACTCTAT 57.130 33.333 5.39 0.00 0.00 1.98
172 173 9.031360 TGAATGATGTAACTCTATAGTTTTCGC 57.969 33.333 0.00 0.00 43.60 4.70
173 174 8.942338 AATGATGTAACTCTATAGTTTTCGCA 57.058 30.769 0.00 0.00 43.60 5.10
174 175 7.751047 TGATGTAACTCTATAGTTTTCGCAC 57.249 36.000 0.00 0.00 43.60 5.34
175 176 7.544622 TGATGTAACTCTATAGTTTTCGCACT 58.455 34.615 0.00 0.00 43.60 4.40
176 177 8.680001 TGATGTAACTCTATAGTTTTCGCACTA 58.320 33.333 0.00 0.00 43.60 2.74
177 178 9.512435 GATGTAACTCTATAGTTTTCGCACTAA 57.488 33.333 0.00 0.00 43.60 2.24
178 179 9.865321 ATGTAACTCTATAGTTTTCGCACTAAA 57.135 29.630 0.00 0.00 43.60 1.85
179 180 9.350357 TGTAACTCTATAGTTTTCGCACTAAAG 57.650 33.333 0.00 0.00 43.60 1.85
180 181 9.351570 GTAACTCTATAGTTTTCGCACTAAAGT 57.648 33.333 0.00 0.00 43.60 2.66
182 183 8.908172 ACTCTATAGTTTTCGCACTAAAGTAC 57.092 34.615 0.00 0.00 32.90 2.73
183 184 7.972832 ACTCTATAGTTTTCGCACTAAAGTACC 59.027 37.037 0.00 0.00 32.90 3.34
184 185 7.829725 TCTATAGTTTTCGCACTAAAGTACCA 58.170 34.615 0.00 0.00 32.90 3.25
185 186 6.963049 ATAGTTTTCGCACTAAAGTACCAG 57.037 37.500 0.00 0.00 32.90 4.00
186 187 4.062991 AGTTTTCGCACTAAAGTACCAGG 58.937 43.478 0.00 0.00 0.00 4.45
187 188 4.060205 GTTTTCGCACTAAAGTACCAGGA 58.940 43.478 0.00 0.00 0.00 3.86
188 189 3.587797 TTCGCACTAAAGTACCAGGAG 57.412 47.619 0.00 0.00 0.00 3.69
189 190 1.822990 TCGCACTAAAGTACCAGGAGG 59.177 52.381 0.00 0.00 42.21 4.30
190 191 1.739371 CGCACTAAAGTACCAGGAGGC 60.739 57.143 0.00 0.00 39.06 4.70
191 192 1.555533 GCACTAAAGTACCAGGAGGCT 59.444 52.381 0.00 0.00 39.06 4.58
192 193 2.027100 GCACTAAAGTACCAGGAGGCTT 60.027 50.000 0.00 0.00 39.06 4.35
193 194 3.559384 GCACTAAAGTACCAGGAGGCTTT 60.559 47.826 0.00 3.32 39.06 3.51
194 195 4.652822 CACTAAAGTACCAGGAGGCTTTT 58.347 43.478 11.05 0.00 39.06 2.27
195 196 4.695928 CACTAAAGTACCAGGAGGCTTTTC 59.304 45.833 11.05 0.00 39.06 2.29
196 197 2.881111 AAGTACCAGGAGGCTTTTCC 57.119 50.000 0.00 0.00 39.06 3.13
197 198 0.992695 AGTACCAGGAGGCTTTTCCC 59.007 55.000 0.00 0.00 38.02 3.97
198 199 0.992695 GTACCAGGAGGCTTTTCCCT 59.007 55.000 0.00 0.00 38.02 4.20
199 200 1.354705 GTACCAGGAGGCTTTTCCCTT 59.645 52.381 0.00 0.00 38.02 3.95
200 201 0.405973 ACCAGGAGGCTTTTCCCTTC 59.594 55.000 0.00 0.00 38.02 3.46
201 202 0.405585 CCAGGAGGCTTTTCCCTTCA 59.594 55.000 0.00 0.00 38.02 3.02
202 203 1.203050 CCAGGAGGCTTTTCCCTTCAA 60.203 52.381 0.00 0.00 38.02 2.69
203 204 2.597455 CAGGAGGCTTTTCCCTTCAAA 58.403 47.619 0.00 0.00 38.02 2.69
204 205 2.965147 CAGGAGGCTTTTCCCTTCAAAA 59.035 45.455 0.00 0.00 38.02 2.44
205 206 3.580022 CAGGAGGCTTTTCCCTTCAAAAT 59.420 43.478 0.00 0.00 38.02 1.82
206 207 4.772100 CAGGAGGCTTTTCCCTTCAAAATA 59.228 41.667 0.00 0.00 38.02 1.40
207 208 5.245977 CAGGAGGCTTTTCCCTTCAAAATAA 59.754 40.000 0.00 0.00 38.02 1.40
208 209 5.843969 AGGAGGCTTTTCCCTTCAAAATAAA 59.156 36.000 0.00 0.00 38.02 1.40
209 210 6.328934 AGGAGGCTTTTCCCTTCAAAATAAAA 59.671 34.615 0.00 0.00 38.02 1.52
210 211 6.995686 GGAGGCTTTTCCCTTCAAAATAAAAA 59.004 34.615 0.00 0.00 34.69 1.94
245 246 1.533625 TTTTGCGGGTGAATGAGAGG 58.466 50.000 0.00 0.00 0.00 3.69
247 248 2.514824 GCGGGTGAATGAGAGGGC 60.515 66.667 0.00 0.00 0.00 5.19
249 250 1.299648 CGGGTGAATGAGAGGGCAA 59.700 57.895 0.00 0.00 0.00 4.52
294 295 1.462616 TGGGTGCAATGCATACACTC 58.537 50.000 24.17 22.43 41.91 3.51
309 310 6.483307 TGCATACACTCTATTGGAATAGTTGC 59.517 38.462 6.34 7.67 39.47 4.17
318 319 8.985315 TCTATTGGAATAGTTGCAAGATGAAT 57.015 30.769 0.00 0.08 44.23 2.57
346 347 5.700832 TGGTTGATGACATGACTACTTTCAC 59.299 40.000 0.00 0.00 0.00 3.18
403 404 8.827677 GTCCTTATTGTTACATGTTGTAGATCC 58.172 37.037 2.30 0.00 33.92 3.36
414 415 3.266772 TGTTGTAGATCCCTTCTTGGCAT 59.733 43.478 0.00 0.00 35.79 4.40
448 449 0.030504 CGTGCCATGCTTGTTTGACA 59.969 50.000 0.00 0.00 0.00 3.58
452 453 3.560896 GTGCCATGCTTGTTTGACAAATT 59.439 39.130 3.49 0.00 37.69 1.82
463 464 2.198827 TGACAAATTGACGGGCTCAT 57.801 45.000 0.00 0.00 0.00 2.90
473 475 2.355115 GGGCTCATTCAACGGGGT 59.645 61.111 0.00 0.00 0.00 4.95
554 560 5.121105 GCTATACGGTAACCCAAAGACAAT 58.879 41.667 0.00 0.00 0.00 2.71
562 568 1.075374 ACCCAAAGACAATGGCAGCTA 59.925 47.619 0.00 0.00 36.58 3.32
563 569 2.170166 CCCAAAGACAATGGCAGCTAA 58.830 47.619 0.00 0.00 36.58 3.09
567 573 4.201990 CCAAAGACAATGGCAGCTAAGATC 60.202 45.833 0.00 0.00 0.00 2.75
637 659 3.064324 GCCCGAGTTGCTTGGCAT 61.064 61.111 0.00 0.00 43.46 4.40
669 691 7.885922 TCAATTGACTTTTAGCATTACTACCCA 59.114 33.333 3.38 0.00 0.00 4.51
677 699 2.169352 AGCATTACTACCCACTGCTCTG 59.831 50.000 0.00 0.00 38.78 3.35
747 2006 9.783256 CGACAACGGACTTCATATAATCATATA 57.217 33.333 0.00 0.00 35.72 0.86
879 2148 4.976987 TCGTCAGTTTCAGTTGTTTTTCC 58.023 39.130 0.00 0.00 0.00 3.13
882 2151 6.540914 TCGTCAGTTTCAGTTGTTTTTCCTAT 59.459 34.615 0.00 0.00 0.00 2.57
916 2197 1.194547 CCACCGATGCGCACAATATAC 59.805 52.381 14.90 0.00 0.00 1.47
923 2204 1.886861 GCGCACAATATACTCCGGCG 61.887 60.000 0.30 0.00 45.15 6.46
930 2211 0.614979 ATATACTCCGGCGGCCAGAT 60.615 55.000 23.83 13.84 0.00 2.90
957 2238 2.450502 ACCCAAGTGGCCCAGTCT 60.451 61.111 0.00 0.00 37.83 3.24
1006 2299 2.258013 ACGGTGTCACAAATGGCGG 61.258 57.895 5.12 0.00 30.78 6.13
1053 2346 1.525077 TGGACCACCACGAAACTGC 60.525 57.895 0.00 0.00 41.77 4.40
1128 2421 1.811428 CTATCACCGTCGTCGTCTTG 58.189 55.000 0.71 0.00 35.01 3.02
1167 2460 2.025887 CCAAGTCAAGGCCAAGGTCTAT 60.026 50.000 5.01 0.00 0.00 1.98
1243 2536 4.735132 CGCCCGTCTTCGCCTTCA 62.735 66.667 0.00 0.00 35.54 3.02
1680 2973 8.641498 ACAAGATCTACTTTTGATGAACCAAT 57.359 30.769 0.00 0.00 36.61 3.16
1681 2974 9.082313 ACAAGATCTACTTTTGATGAACCAATT 57.918 29.630 0.00 0.00 36.61 2.32
1682 2975 9.565213 CAAGATCTACTTTTGATGAACCAATTC 57.435 33.333 0.00 0.00 36.61 2.17
1691 2984 7.822161 TTTGATGAACCAATTCTTCTTCAGA 57.178 32.000 9.32 5.13 38.95 3.27
1719 3016 3.399330 TCGAATAGGAATTCCCGAATGC 58.601 45.455 21.22 9.99 38.66 3.56
1720 3017 3.138304 CGAATAGGAATTCCCGAATGCA 58.862 45.455 21.22 0.00 38.66 3.96
1721 3018 3.058914 CGAATAGGAATTCCCGAATGCAC 60.059 47.826 21.22 7.27 38.66 4.57
1796 3094 5.125900 TCAGTTCCGTGGATTCGATTTAGTA 59.874 40.000 0.00 0.00 0.00 1.82
1846 3349 5.473796 TTCCAAACGAGTAAAAGACACAC 57.526 39.130 0.00 0.00 0.00 3.82
1995 3531 2.420129 GCGGATACACCAAATCTGACCT 60.420 50.000 0.00 0.00 38.90 3.85
1996 3532 3.873910 CGGATACACCAAATCTGACCTT 58.126 45.455 0.00 0.00 38.90 3.50
1997 3533 3.871594 CGGATACACCAAATCTGACCTTC 59.128 47.826 0.00 0.00 38.90 3.46
1998 3534 4.622933 CGGATACACCAAATCTGACCTTCA 60.623 45.833 0.00 0.00 38.90 3.02
2001 3537 4.918810 ACACCAAATCTGACCTTCAAAC 57.081 40.909 0.00 0.00 0.00 2.93
2002 3538 4.277476 ACACCAAATCTGACCTTCAAACA 58.723 39.130 0.00 0.00 0.00 2.83
2003 3539 4.097892 ACACCAAATCTGACCTTCAAACAC 59.902 41.667 0.00 0.00 0.00 3.32
2049 3587 1.296715 GACAATGACCCGTCAGGCT 59.703 57.895 3.61 0.00 43.61 4.58
2050 3588 0.741221 GACAATGACCCGTCAGGCTC 60.741 60.000 3.61 0.00 43.61 4.70
2053 3593 0.400213 AATGACCCGTCAGGCTCAAA 59.600 50.000 3.61 0.00 43.61 2.69
2055 3595 0.400213 TGACCCGTCAGGCTCAAATT 59.600 50.000 0.00 0.00 40.58 1.82
2058 3598 1.202879 ACCCGTCAGGCTCAAATTTCA 60.203 47.619 0.00 0.00 40.58 2.69
2080 3620 4.927267 TTTCCACAACCAGATACCTCAT 57.073 40.909 0.00 0.00 0.00 2.90
2082 3622 6.381498 TTTCCACAACCAGATACCTCATTA 57.619 37.500 0.00 0.00 0.00 1.90
2083 3623 5.353394 TCCACAACCAGATACCTCATTAC 57.647 43.478 0.00 0.00 0.00 1.89
2084 3624 5.030147 TCCACAACCAGATACCTCATTACT 58.970 41.667 0.00 0.00 0.00 2.24
2115 3656 3.961477 TCCATACAATTACATGCACGC 57.039 42.857 0.00 0.00 0.00 5.34
2128 3670 1.803334 TGCACGCGAAACCTAATCTT 58.197 45.000 15.93 0.00 0.00 2.40
2163 3705 2.782222 GCTCCGCCGAGTCCATGTA 61.782 63.158 3.98 0.00 38.49 2.29
2195 3737 2.428925 GCGTCCCTCGGGGTATTGA 61.429 63.158 0.00 0.00 44.74 2.57
2197 3739 1.624336 CGTCCCTCGGGGTATTGATA 58.376 55.000 0.00 0.00 44.74 2.15
2227 3769 2.299521 GCGAGGTAGAGTAGGACATGT 58.700 52.381 0.00 0.00 0.00 3.21
2234 3776 4.402793 GGTAGAGTAGGACATGTGACACAT 59.597 45.833 15.48 15.48 39.91 3.21
2239 3781 4.716784 AGTAGGACATGTGACACATACCAT 59.283 41.667 29.24 20.62 36.53 3.55
2242 3784 4.225942 AGGACATGTGACACATACCATCTT 59.774 41.667 29.24 17.02 36.53 2.40
2252 3794 2.621998 ACATACCATCTTACGGGACTCG 59.378 50.000 0.00 0.00 45.88 4.18
2258 3800 2.360350 TTACGGGACTCGAGGCGT 60.360 61.111 18.41 10.79 42.43 5.68
2272 3814 2.663188 GCGTCGCCATCTCCCATC 60.663 66.667 5.75 0.00 0.00 3.51
2289 3831 4.078336 TCCCATCCTCTACTCTTCCTCATT 60.078 45.833 0.00 0.00 0.00 2.57
2302 3844 1.450312 CTCATTGGAGCCCGTCACC 60.450 63.158 0.00 0.00 33.67 4.02
2327 3870 2.697819 TCGTCGGCGATGTGAGATA 58.302 52.632 26.56 5.43 42.81 1.98
2330 3873 1.660614 CGTCGGCGATGTGAGATAGAC 60.661 57.143 20.53 0.00 41.33 2.59
2335 3878 2.030717 GGCGATGTGAGATAGACGATGT 60.031 50.000 0.00 0.00 0.00 3.06
2336 3879 3.230355 GCGATGTGAGATAGACGATGTC 58.770 50.000 0.00 0.00 0.00 3.06
2337 3880 3.304057 GCGATGTGAGATAGACGATGTCA 60.304 47.826 0.00 0.00 35.53 3.58
2338 3881 4.614764 GCGATGTGAGATAGACGATGTCAT 60.615 45.833 0.00 0.00 39.82 3.06
2339 3882 5.085390 CGATGTGAGATAGACGATGTCATC 58.915 45.833 2.43 2.43 39.82 2.92
2340 3883 5.106752 CGATGTGAGATAGACGATGTCATCT 60.107 44.000 11.04 9.88 39.82 2.90
2341 3884 5.681337 TGTGAGATAGACGATGTCATCTC 57.319 43.478 20.35 20.35 39.82 2.75
2342 3885 4.517075 TGTGAGATAGACGATGTCATCTCC 59.483 45.833 22.22 17.48 39.82 3.71
2343 3886 3.748568 TGAGATAGACGATGTCATCTCCG 59.251 47.826 22.22 1.30 41.18 4.63
2344 3887 3.997681 GAGATAGACGATGTCATCTCCGA 59.002 47.826 18.40 0.00 39.00 4.55
2345 3888 3.749088 AGATAGACGATGTCATCTCCGAC 59.251 47.826 11.04 0.00 34.60 4.79
2346 3889 1.025812 AGACGATGTCATCTCCGACC 58.974 55.000 11.04 0.00 34.60 4.79
2347 3890 1.025812 GACGATGTCATCTCCGACCT 58.974 55.000 11.04 0.00 34.88 3.85
2348 3891 1.002251 GACGATGTCATCTCCGACCTC 60.002 57.143 11.04 0.00 34.88 3.85
2349 3892 1.313772 CGATGTCATCTCCGACCTCT 58.686 55.000 11.04 0.00 34.88 3.69
2350 3893 1.678627 CGATGTCATCTCCGACCTCTT 59.321 52.381 11.04 0.00 34.88 2.85
2351 3894 2.287308 CGATGTCATCTCCGACCTCTTC 60.287 54.545 11.04 0.00 34.88 2.87
2352 3895 2.215942 TGTCATCTCCGACCTCTTCA 57.784 50.000 0.00 0.00 34.88 3.02
2353 3896 2.525368 TGTCATCTCCGACCTCTTCAA 58.475 47.619 0.00 0.00 34.88 2.69
2354 3897 2.493675 TGTCATCTCCGACCTCTTCAAG 59.506 50.000 0.00 0.00 34.88 3.02
2364 3907 3.129792 CTCTTCAAGGAGGTCGCAC 57.870 57.895 0.00 0.00 0.00 5.34
2365 3908 0.734253 CTCTTCAAGGAGGTCGCACG 60.734 60.000 0.00 0.00 0.00 5.34
2366 3909 2.357034 TTCAAGGAGGTCGCACGC 60.357 61.111 0.00 0.00 0.00 5.34
2367 3910 3.876589 TTCAAGGAGGTCGCACGCC 62.877 63.158 0.00 0.00 0.00 5.68
2383 3926 4.489771 CCCGCCAAGCCGAGGATT 62.490 66.667 0.00 0.00 0.00 3.01
2384 3927 2.438434 CCGCCAAGCCGAGGATTT 60.438 61.111 0.00 0.00 0.00 2.17
2385 3928 2.046285 CCGCCAAGCCGAGGATTTT 61.046 57.895 0.00 0.00 0.00 1.82
2386 3929 1.595093 CCGCCAAGCCGAGGATTTTT 61.595 55.000 0.00 0.00 0.00 1.94
2387 3930 0.456653 CGCCAAGCCGAGGATTTTTG 60.457 55.000 0.00 0.00 0.00 2.44
2388 3931 0.887933 GCCAAGCCGAGGATTTTTGA 59.112 50.000 0.00 0.00 0.00 2.69
2389 3932 1.272212 GCCAAGCCGAGGATTTTTGAA 59.728 47.619 0.00 0.00 0.00 2.69
2390 3933 2.672195 GCCAAGCCGAGGATTTTTGAAG 60.672 50.000 0.00 0.00 0.00 3.02
2391 3934 2.599659 CAAGCCGAGGATTTTTGAAGC 58.400 47.619 0.00 0.00 0.00 3.86
2392 3935 1.177401 AGCCGAGGATTTTTGAAGCC 58.823 50.000 0.00 0.00 0.00 4.35
2393 3936 0.179163 GCCGAGGATTTTTGAAGCCG 60.179 55.000 0.00 0.00 0.00 5.52
2394 3937 1.448985 CCGAGGATTTTTGAAGCCGA 58.551 50.000 0.00 0.00 0.00 5.54
2395 3938 1.810151 CCGAGGATTTTTGAAGCCGAA 59.190 47.619 0.00 0.00 0.00 4.30
2396 3939 2.423538 CCGAGGATTTTTGAAGCCGAAT 59.576 45.455 0.00 0.00 0.00 3.34
2397 3940 3.429085 CGAGGATTTTTGAAGCCGAATG 58.571 45.455 0.00 0.00 0.00 2.67
2398 3941 3.119849 CGAGGATTTTTGAAGCCGAATGT 60.120 43.478 0.00 0.00 0.00 2.71
2399 3942 4.415735 GAGGATTTTTGAAGCCGAATGTC 58.584 43.478 0.00 0.00 0.00 3.06
2400 3943 4.082125 AGGATTTTTGAAGCCGAATGTCT 58.918 39.130 0.00 0.00 0.00 3.41
2401 3944 5.253330 AGGATTTTTGAAGCCGAATGTCTA 58.747 37.500 0.00 0.00 0.00 2.59
2402 3945 5.123979 AGGATTTTTGAAGCCGAATGTCTAC 59.876 40.000 0.00 0.00 0.00 2.59
2403 3946 5.106317 GGATTTTTGAAGCCGAATGTCTACA 60.106 40.000 0.00 0.00 0.00 2.74
2404 3947 5.759506 TTTTTGAAGCCGAATGTCTACAA 57.240 34.783 0.00 0.00 0.00 2.41
2405 3948 5.957842 TTTTGAAGCCGAATGTCTACAAT 57.042 34.783 0.00 0.00 0.00 2.71
2406 3949 4.944962 TTGAAGCCGAATGTCTACAATG 57.055 40.909 0.00 0.00 0.00 2.82
2407 3950 4.200838 TGAAGCCGAATGTCTACAATGA 57.799 40.909 0.00 0.00 0.00 2.57
2408 3951 3.932710 TGAAGCCGAATGTCTACAATGAC 59.067 43.478 0.00 0.00 37.47 3.06
2419 3962 6.419484 TGTCTACAATGACAAAGAAGAGGA 57.581 37.500 0.00 0.00 43.08 3.71
2420 3963 6.459066 TGTCTACAATGACAAAGAAGAGGAG 58.541 40.000 0.00 0.00 43.08 3.69
2421 3964 6.267699 TGTCTACAATGACAAAGAAGAGGAGA 59.732 38.462 0.00 0.00 43.08 3.71
2422 3965 6.811170 GTCTACAATGACAAAGAAGAGGAGAG 59.189 42.308 0.00 0.00 36.97 3.20
2423 3966 4.904241 ACAATGACAAAGAAGAGGAGAGG 58.096 43.478 0.00 0.00 0.00 3.69
2424 3967 4.349342 ACAATGACAAAGAAGAGGAGAGGT 59.651 41.667 0.00 0.00 0.00 3.85
2425 3968 4.817318 ATGACAAAGAAGAGGAGAGGTC 57.183 45.455 0.00 0.00 0.00 3.85
2426 3969 3.576861 TGACAAAGAAGAGGAGAGGTCA 58.423 45.455 0.00 0.00 0.00 4.02
2427 3970 3.576118 TGACAAAGAAGAGGAGAGGTCAG 59.424 47.826 0.00 0.00 31.17 3.51
2428 3971 3.829601 GACAAAGAAGAGGAGAGGTCAGA 59.170 47.826 0.00 0.00 0.00 3.27
2429 3972 3.576550 ACAAAGAAGAGGAGAGGTCAGAC 59.423 47.826 0.00 0.00 0.00 3.51
2430 3973 3.534357 AAGAAGAGGAGAGGTCAGACA 57.466 47.619 2.17 0.00 0.00 3.41
2431 3974 2.802719 AGAAGAGGAGAGGTCAGACAC 58.197 52.381 2.17 0.00 0.00 3.67
2440 3983 3.307379 GGTCAGACACCCAACTCAC 57.693 57.895 2.17 0.00 39.69 3.51
2441 3984 0.250338 GGTCAGACACCCAACTCACC 60.250 60.000 2.17 0.00 39.69 4.02
2442 3985 0.468226 GTCAGACACCCAACTCACCA 59.532 55.000 0.00 0.00 0.00 4.17
2443 3986 1.134220 GTCAGACACCCAACTCACCAA 60.134 52.381 0.00 0.00 0.00 3.67
2444 3987 1.140852 TCAGACACCCAACTCACCAAG 59.859 52.381 0.00 0.00 0.00 3.61
2445 3988 0.179018 AGACACCCAACTCACCAAGC 60.179 55.000 0.00 0.00 0.00 4.01
2446 3989 0.465460 GACACCCAACTCACCAAGCA 60.465 55.000 0.00 0.00 0.00 3.91
2447 3990 0.751643 ACACCCAACTCACCAAGCAC 60.752 55.000 0.00 0.00 0.00 4.40
2448 3991 1.525995 ACCCAACTCACCAAGCACG 60.526 57.895 0.00 0.00 0.00 5.34
2449 3992 2.260869 CCCAACTCACCAAGCACGG 61.261 63.158 0.00 0.00 0.00 4.94
2450 3993 1.525995 CCAACTCACCAAGCACGGT 60.526 57.895 0.00 0.00 41.07 4.83
2451 3994 1.101049 CCAACTCACCAAGCACGGTT 61.101 55.000 0.00 0.00 37.07 4.44
2452 3995 0.029300 CAACTCACCAAGCACGGTTG 59.971 55.000 1.98 1.98 37.07 3.77
2453 3996 0.393808 AACTCACCAAGCACGGTTGT 60.394 50.000 8.06 0.00 37.07 3.32
2454 3997 0.814010 ACTCACCAAGCACGGTTGTC 60.814 55.000 8.06 0.00 37.07 3.18
2455 3998 1.507141 CTCACCAAGCACGGTTGTCC 61.507 60.000 8.06 0.00 37.07 4.02
2456 3999 1.525995 CACCAAGCACGGTTGTCCT 60.526 57.895 8.06 0.00 37.07 3.85
2457 4000 1.227853 ACCAAGCACGGTTGTCCTC 60.228 57.895 8.06 0.00 34.91 3.71
2458 4001 2.317609 CCAAGCACGGTTGTCCTCG 61.318 63.158 8.06 0.00 0.00 4.63
2459 4002 1.300620 CAAGCACGGTTGTCCTCGA 60.301 57.895 0.82 0.00 0.00 4.04
2460 4003 1.300697 AAGCACGGTTGTCCTCGAC 60.301 57.895 0.00 0.00 0.00 4.20
2461 4004 1.745320 AAGCACGGTTGTCCTCGACT 61.745 55.000 0.00 0.00 33.15 4.18
2462 4005 1.300697 GCACGGTTGTCCTCGACTT 60.301 57.895 0.00 0.00 33.15 3.01
2463 4006 1.282930 GCACGGTTGTCCTCGACTTC 61.283 60.000 0.00 0.00 33.15 3.01
2464 4007 0.666577 CACGGTTGTCCTCGACTTCC 60.667 60.000 0.00 0.00 33.15 3.46
2465 4008 0.826672 ACGGTTGTCCTCGACTTCCT 60.827 55.000 0.00 0.00 33.15 3.36
2466 4009 0.109226 CGGTTGTCCTCGACTTCCTC 60.109 60.000 0.00 0.00 33.15 3.71
2467 4010 0.246910 GGTTGTCCTCGACTTCCTCC 59.753 60.000 0.00 0.00 33.15 4.30
2468 4011 1.258676 GTTGTCCTCGACTTCCTCCT 58.741 55.000 0.00 0.00 33.15 3.69
2469 4012 2.444421 GTTGTCCTCGACTTCCTCCTA 58.556 52.381 0.00 0.00 33.15 2.94
2470 4013 2.421751 TGTCCTCGACTTCCTCCTAG 57.578 55.000 0.00 0.00 33.15 3.02
2471 4014 1.064611 TGTCCTCGACTTCCTCCTAGG 60.065 57.143 0.82 0.82 33.03 3.02
2472 4015 1.212441 GTCCTCGACTTCCTCCTAGGA 59.788 57.143 11.98 11.98 44.10 2.94
2473 4016 1.491332 TCCTCGACTTCCTCCTAGGAG 59.509 57.143 29.27 29.27 46.73 3.69
2474 4017 1.314730 CTCGACTTCCTCCTAGGAGC 58.685 60.000 30.56 16.69 46.73 4.70
2475 4018 0.624254 TCGACTTCCTCCTAGGAGCA 59.376 55.000 30.56 16.53 46.73 4.26
2476 4019 1.005569 TCGACTTCCTCCTAGGAGCAA 59.994 52.381 30.56 22.86 46.73 3.91
2477 4020 1.135333 CGACTTCCTCCTAGGAGCAAC 59.865 57.143 30.56 17.79 46.73 4.17
2478 4021 2.180276 GACTTCCTCCTAGGAGCAACA 58.820 52.381 30.56 12.66 46.73 3.33
2479 4022 2.567615 GACTTCCTCCTAGGAGCAACAA 59.432 50.000 30.56 18.35 46.73 2.83
2480 4023 2.569404 ACTTCCTCCTAGGAGCAACAAG 59.431 50.000 30.56 26.22 46.73 3.16
2481 4024 0.905357 TCCTCCTAGGAGCAACAAGC 59.095 55.000 30.56 0.00 40.06 4.01
2482 4025 2.517809 TCCTCCTAGGAGCAACAAGCC 61.518 57.143 30.56 0.00 40.06 4.35
2490 4033 2.251371 GCAACAAGCCCGACGAAC 59.749 61.111 0.00 0.00 37.23 3.95
2491 4034 2.251642 GCAACAAGCCCGACGAACT 61.252 57.895 0.00 0.00 37.23 3.01
2492 4035 0.947180 GCAACAAGCCCGACGAACTA 60.947 55.000 0.00 0.00 37.23 2.24
2493 4036 1.722011 CAACAAGCCCGACGAACTAT 58.278 50.000 0.00 0.00 0.00 2.12
2494 4037 1.393539 CAACAAGCCCGACGAACTATG 59.606 52.381 0.00 0.00 0.00 2.23
2495 4038 0.606604 ACAAGCCCGACGAACTATGT 59.393 50.000 0.00 0.00 0.00 2.29
2496 4039 1.278238 CAAGCCCGACGAACTATGTC 58.722 55.000 0.00 0.00 0.00 3.06
2497 4040 0.892755 AAGCCCGACGAACTATGTCA 59.107 50.000 0.00 0.00 36.11 3.58
2498 4041 0.172803 AGCCCGACGAACTATGTCAC 59.827 55.000 0.00 0.00 36.11 3.67
2499 4042 0.804933 GCCCGACGAACTATGTCACC 60.805 60.000 0.00 0.00 36.11 4.02
2500 4043 0.815734 CCCGACGAACTATGTCACCT 59.184 55.000 0.00 0.00 36.11 4.00
2501 4044 1.202268 CCCGACGAACTATGTCACCTC 60.202 57.143 0.00 0.00 36.11 3.85
2502 4045 1.202268 CCGACGAACTATGTCACCTCC 60.202 57.143 0.00 0.00 36.11 4.30
2503 4046 1.531264 CGACGAACTATGTCACCTCCG 60.531 57.143 0.00 0.00 36.11 4.63
2504 4047 1.741706 GACGAACTATGTCACCTCCGA 59.258 52.381 0.00 0.00 36.37 4.55
2505 4048 1.471684 ACGAACTATGTCACCTCCGAC 59.528 52.381 0.00 0.00 36.40 4.79
2512 4055 1.627864 TGTCACCTCCGACATCTTCA 58.372 50.000 0.00 0.00 40.94 3.02
2513 4056 1.546029 TGTCACCTCCGACATCTTCAG 59.454 52.381 0.00 0.00 40.94 3.02
2514 4057 1.134965 GTCACCTCCGACATCTTCAGG 60.135 57.143 0.00 0.00 35.88 3.86
2515 4058 0.176680 CACCTCCGACATCTTCAGGG 59.823 60.000 0.00 0.00 0.00 4.45
2516 4059 0.978146 ACCTCCGACATCTTCAGGGG 60.978 60.000 0.00 0.00 0.00 4.79
2517 4060 1.690219 CCTCCGACATCTTCAGGGGG 61.690 65.000 0.00 0.00 38.17 5.40
2532 4075 2.142220 GGGGGTCGGCATAAGATCA 58.858 57.895 0.00 0.00 0.00 2.92
2533 4076 0.693049 GGGGGTCGGCATAAGATCAT 59.307 55.000 0.00 0.00 0.00 2.45
2534 4077 1.073923 GGGGGTCGGCATAAGATCATT 59.926 52.381 0.00 0.00 0.00 2.57
2535 4078 2.154462 GGGGTCGGCATAAGATCATTG 58.846 52.381 0.00 0.00 0.00 2.82
2536 4079 2.487265 GGGGTCGGCATAAGATCATTGT 60.487 50.000 0.00 0.00 0.00 2.71
2537 4080 3.214328 GGGTCGGCATAAGATCATTGTT 58.786 45.455 0.00 0.00 0.00 2.83
2538 4081 3.251004 GGGTCGGCATAAGATCATTGTTC 59.749 47.826 0.00 0.00 0.00 3.18
2539 4082 3.876914 GGTCGGCATAAGATCATTGTTCA 59.123 43.478 0.00 0.00 0.00 3.18
2540 4083 4.516698 GGTCGGCATAAGATCATTGTTCAT 59.483 41.667 0.00 0.00 0.00 2.57
2541 4084 5.009010 GGTCGGCATAAGATCATTGTTCATT 59.991 40.000 0.00 0.00 0.00 2.57
2542 4085 6.138761 GTCGGCATAAGATCATTGTTCATTC 58.861 40.000 0.00 0.00 0.00 2.67
2543 4086 5.821995 TCGGCATAAGATCATTGTTCATTCA 59.178 36.000 0.00 0.00 0.00 2.57
2544 4087 6.318396 TCGGCATAAGATCATTGTTCATTCAA 59.682 34.615 0.00 0.00 0.00 2.69
2545 4088 6.974048 CGGCATAAGATCATTGTTCATTCAAA 59.026 34.615 0.00 0.00 0.00 2.69
2546 4089 7.166970 CGGCATAAGATCATTGTTCATTCAAAG 59.833 37.037 0.00 0.00 0.00 2.77
2547 4090 7.437267 GGCATAAGATCATTGTTCATTCAAAGG 59.563 37.037 0.00 0.00 0.00 3.11
2548 4091 8.192774 GCATAAGATCATTGTTCATTCAAAGGA 58.807 33.333 0.00 0.00 0.00 3.36
2549 4092 9.512435 CATAAGATCATTGTTCATTCAAAGGAC 57.488 33.333 0.00 0.00 0.00 3.85
2550 4093 7.771927 AAGATCATTGTTCATTCAAAGGACT 57.228 32.000 0.00 0.00 0.00 3.85
2551 4094 7.388460 AGATCATTGTTCATTCAAAGGACTC 57.612 36.000 0.00 0.00 0.00 3.36
2552 4095 5.964958 TCATTGTTCATTCAAAGGACTCC 57.035 39.130 0.00 0.00 0.00 3.85
2553 4096 4.766891 TCATTGTTCATTCAAAGGACTCCC 59.233 41.667 0.00 0.00 0.00 4.30
2555 4098 4.021102 TGTTCATTCAAAGGACTCCCTC 57.979 45.455 0.00 0.00 43.48 4.30
2556 4099 3.394274 TGTTCATTCAAAGGACTCCCTCA 59.606 43.478 0.00 0.00 43.48 3.86
2557 4100 4.141274 TGTTCATTCAAAGGACTCCCTCAA 60.141 41.667 0.00 0.00 43.48 3.02
2558 4101 4.292186 TCATTCAAAGGACTCCCTCAAG 57.708 45.455 0.00 0.00 43.48 3.02
2559 4102 3.909995 TCATTCAAAGGACTCCCTCAAGA 59.090 43.478 0.00 0.00 43.48 3.02
2560 4103 3.771577 TTCAAAGGACTCCCTCAAGAC 57.228 47.619 0.00 0.00 43.48 3.01
2561 4104 1.978580 TCAAAGGACTCCCTCAAGACC 59.021 52.381 0.00 0.00 43.48 3.85
2562 4105 1.981495 CAAAGGACTCCCTCAAGACCT 59.019 52.381 0.00 0.00 43.48 3.85
2563 4106 1.945580 AAGGACTCCCTCAAGACCTC 58.054 55.000 0.00 0.00 43.48 3.85
2564 4107 0.323908 AGGACTCCCTCAAGACCTCG 60.324 60.000 0.00 0.00 38.86 4.63
2565 4108 1.513622 GACTCCCTCAAGACCTCGC 59.486 63.158 0.00 0.00 0.00 5.03
2566 4109 1.950973 GACTCCCTCAAGACCTCGCC 61.951 65.000 0.00 0.00 0.00 5.54
2567 4110 3.068691 TCCCTCAAGACCTCGCCG 61.069 66.667 0.00 0.00 0.00 6.46
2568 4111 3.068691 CCCTCAAGACCTCGCCGA 61.069 66.667 0.00 0.00 0.00 5.54
2569 4112 2.492090 CCTCAAGACCTCGCCGAG 59.508 66.667 7.25 7.25 0.00 4.63
2570 4113 2.202676 CTCAAGACCTCGCCGAGC 60.203 66.667 9.01 0.00 0.00 5.03
2571 4114 2.989253 TCAAGACCTCGCCGAGCA 60.989 61.111 9.01 0.00 0.00 4.26
2572 4115 2.507992 CAAGACCTCGCCGAGCAG 60.508 66.667 9.01 0.00 0.00 4.24
2573 4116 2.992114 AAGACCTCGCCGAGCAGT 60.992 61.111 9.01 1.61 0.00 4.40
2574 4117 2.995872 AAGACCTCGCCGAGCAGTC 61.996 63.158 9.01 11.74 0.00 3.51
2575 4118 3.444805 GACCTCGCCGAGCAGTCT 61.445 66.667 9.01 0.00 0.00 3.24
2576 4119 2.045242 ACCTCGCCGAGCAGTCTA 60.045 61.111 9.01 0.00 0.00 2.59
2577 4120 1.654954 GACCTCGCCGAGCAGTCTAA 61.655 60.000 9.01 0.00 0.00 2.10
2578 4121 1.064946 CCTCGCCGAGCAGTCTAAG 59.935 63.158 9.01 0.00 0.00 2.18
2579 4122 1.377366 CCTCGCCGAGCAGTCTAAGA 61.377 60.000 9.01 0.00 0.00 2.10
2580 4123 0.248296 CTCGCCGAGCAGTCTAAGAC 60.248 60.000 0.00 0.00 0.00 3.01
2581 4124 1.583967 CGCCGAGCAGTCTAAGACG 60.584 63.158 0.00 0.00 37.67 4.18
2582 4125 1.226717 GCCGAGCAGTCTAAGACGG 60.227 63.158 0.00 0.00 42.63 4.79
2590 4133 1.920574 CAGTCTAAGACGGCACATTCG 59.079 52.381 0.00 0.00 37.67 3.34
2591 4134 1.135083 AGTCTAAGACGGCACATTCGG 60.135 52.381 0.00 0.00 37.67 4.30
2592 4135 0.892755 TCTAAGACGGCACATTCGGT 59.107 50.000 0.00 0.00 0.00 4.69
2593 4136 1.274167 TCTAAGACGGCACATTCGGTT 59.726 47.619 0.00 0.00 0.00 4.44
2594 4137 1.659098 CTAAGACGGCACATTCGGTTC 59.341 52.381 0.00 0.00 0.00 3.62
2595 4138 1.289109 AAGACGGCACATTCGGTTCG 61.289 55.000 0.00 0.00 0.00 3.95
2596 4139 2.736682 GACGGCACATTCGGTTCGG 61.737 63.158 0.00 0.00 0.00 4.30
2597 4140 4.160635 CGGCACATTCGGTTCGGC 62.161 66.667 0.00 0.00 0.00 5.54
2598 4141 3.053291 GGCACATTCGGTTCGGCA 61.053 61.111 0.00 0.00 0.00 5.69
2599 4142 2.406616 GGCACATTCGGTTCGGCAT 61.407 57.895 0.00 0.00 0.00 4.40
2600 4143 1.506262 GCACATTCGGTTCGGCATT 59.494 52.632 0.00 0.00 0.00 3.56
2601 4144 0.730265 GCACATTCGGTTCGGCATTA 59.270 50.000 0.00 0.00 0.00 1.90
2602 4145 1.131504 GCACATTCGGTTCGGCATTAA 59.868 47.619 0.00 0.00 0.00 1.40
2603 4146 2.780993 CACATTCGGTTCGGCATTAAC 58.219 47.619 0.00 0.00 0.00 2.01
2604 4147 1.741145 ACATTCGGTTCGGCATTAACC 59.259 47.619 4.46 4.46 42.52 2.85
2605 4148 2.014128 CATTCGGTTCGGCATTAACCT 58.986 47.619 11.05 0.00 43.55 3.50
2606 4149 2.188062 TTCGGTTCGGCATTAACCTT 57.812 45.000 11.05 0.00 43.55 3.50
2607 4150 3.331478 TTCGGTTCGGCATTAACCTTA 57.669 42.857 11.05 0.00 43.55 2.69
2608 4151 3.331478 TCGGTTCGGCATTAACCTTAA 57.669 42.857 11.05 0.00 43.55 1.85
2609 4152 3.876341 TCGGTTCGGCATTAACCTTAAT 58.124 40.909 11.05 0.00 43.55 1.40
2619 4162 3.866883 TTAACCTTAATGCAGCCAAGC 57.133 42.857 0.00 0.00 0.00 4.01
2620 4163 1.928868 AACCTTAATGCAGCCAAGCT 58.071 45.000 0.00 0.00 40.77 3.74
2621 4164 2.806945 ACCTTAATGCAGCCAAGCTA 57.193 45.000 0.00 0.00 36.40 3.32
2622 4165 2.369394 ACCTTAATGCAGCCAAGCTAC 58.631 47.619 0.00 0.00 36.40 3.58
2623 4166 1.678101 CCTTAATGCAGCCAAGCTACC 59.322 52.381 0.00 0.00 36.40 3.18
2624 4167 1.331756 CTTAATGCAGCCAAGCTACCG 59.668 52.381 0.00 0.00 36.40 4.02
2625 4168 0.539518 TAATGCAGCCAAGCTACCGA 59.460 50.000 0.00 0.00 36.40 4.69
2626 4169 0.107017 AATGCAGCCAAGCTACCGAT 60.107 50.000 0.00 0.00 36.40 4.18
2627 4170 0.816825 ATGCAGCCAAGCTACCGATG 60.817 55.000 0.00 0.00 36.40 3.84
2628 4171 2.182842 GCAGCCAAGCTACCGATGG 61.183 63.158 0.00 0.00 36.40 3.51
2629 4172 1.522092 CAGCCAAGCTACCGATGGA 59.478 57.895 5.53 0.00 36.40 3.41
2630 4173 0.107456 CAGCCAAGCTACCGATGGAT 59.893 55.000 5.53 0.00 36.40 3.41
2631 4174 0.394565 AGCCAAGCTACCGATGGATC 59.605 55.000 5.53 0.00 36.99 3.36
2632 4175 0.106708 GCCAAGCTACCGATGGATCA 59.893 55.000 5.53 0.00 36.27 2.92
2633 4176 1.875576 GCCAAGCTACCGATGGATCAG 60.876 57.143 5.53 0.00 36.27 2.90
2634 4177 1.414181 CCAAGCTACCGATGGATCAGT 59.586 52.381 0.00 0.00 36.27 3.41
2635 4178 2.628178 CCAAGCTACCGATGGATCAGTA 59.372 50.000 0.00 0.00 36.27 2.74
2636 4179 3.553096 CCAAGCTACCGATGGATCAGTAC 60.553 52.174 0.00 0.00 36.27 2.73
2637 4180 1.880675 AGCTACCGATGGATCAGTACG 59.119 52.381 0.00 0.00 0.00 3.67
2638 4181 1.666311 GCTACCGATGGATCAGTACGC 60.666 57.143 0.00 0.00 0.00 4.42
2639 4182 1.880675 CTACCGATGGATCAGTACGCT 59.119 52.381 0.00 0.00 0.00 5.07
2640 4183 1.977056 ACCGATGGATCAGTACGCTA 58.023 50.000 0.00 0.00 0.00 4.26
2641 4184 2.304092 ACCGATGGATCAGTACGCTAA 58.696 47.619 0.00 0.00 0.00 3.09
2642 4185 2.293677 ACCGATGGATCAGTACGCTAAG 59.706 50.000 0.00 0.00 0.00 2.18
2643 4186 2.351835 CCGATGGATCAGTACGCTAAGG 60.352 54.545 0.00 0.00 0.00 2.69
2644 4187 2.351835 CGATGGATCAGTACGCTAAGGG 60.352 54.545 0.00 0.00 0.00 3.95
2645 4188 2.154567 TGGATCAGTACGCTAAGGGT 57.845 50.000 0.00 0.00 0.00 4.34
2646 4189 3.301794 TGGATCAGTACGCTAAGGGTA 57.698 47.619 0.00 0.00 0.00 3.69
2661 4204 2.725811 GGTACCTAGGAGGCCGTAC 58.274 63.158 17.98 6.09 39.63 3.67
2662 4205 0.106519 GGTACCTAGGAGGCCGTACA 60.107 60.000 17.98 0.00 39.63 2.90
2663 4206 1.028130 GTACCTAGGAGGCCGTACAC 58.972 60.000 17.98 0.00 39.63 2.90
2664 4207 0.106519 TACCTAGGAGGCCGTACACC 60.107 60.000 17.98 0.00 39.63 4.16
2665 4208 1.076192 CCTAGGAGGCCGTACACCT 60.076 63.158 1.05 4.12 41.41 4.00
2666 4209 0.184451 CCTAGGAGGCCGTACACCTA 59.816 60.000 1.05 6.33 37.77 3.08
2667 4210 1.606903 CTAGGAGGCCGTACACCTAG 58.393 60.000 19.82 19.82 43.51 3.02
2668 4211 0.921896 TAGGAGGCCGTACACCTAGT 59.078 55.000 4.46 0.00 37.77 2.57
2669 4212 0.921896 AGGAGGCCGTACACCTAGTA 59.078 55.000 4.46 0.00 37.77 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 9.588096 ACTTTGGAGTTCCTACTTTCAAAATAT 57.412 29.630 0.00 0.00 37.37 1.28
18 19 8.990163 ACTTTGGAGTTCCTACTTTCAAAATA 57.010 30.769 0.00 0.00 37.37 1.40
19 20 7.898014 ACTTTGGAGTTCCTACTTTCAAAAT 57.102 32.000 0.00 0.00 37.37 1.82
20 21 7.712204 AACTTTGGAGTTCCTACTTTCAAAA 57.288 32.000 0.00 0.00 42.35 2.44
21 22 7.712204 AAACTTTGGAGTTCCTACTTTCAAA 57.288 32.000 0.00 0.00 45.18 2.69
22 23 8.846211 CATAAACTTTGGAGTTCCTACTTTCAA 58.154 33.333 0.00 0.00 45.18 2.69
23 24 7.996644 ACATAAACTTTGGAGTTCCTACTTTCA 59.003 33.333 0.00 0.00 45.18 2.69
24 25 8.392372 ACATAAACTTTGGAGTTCCTACTTTC 57.608 34.615 0.00 0.00 45.18 2.62
25 26 8.630037 CAACATAAACTTTGGAGTTCCTACTTT 58.370 33.333 0.00 0.00 45.18 2.66
26 27 7.230712 CCAACATAAACTTTGGAGTTCCTACTT 59.769 37.037 0.00 0.00 45.18 2.24
27 28 6.715264 CCAACATAAACTTTGGAGTTCCTACT 59.285 38.462 0.00 0.00 45.18 2.57
28 29 6.489022 ACCAACATAAACTTTGGAGTTCCTAC 59.511 38.462 7.35 0.00 45.18 3.18
29 30 6.607019 ACCAACATAAACTTTGGAGTTCCTA 58.393 36.000 7.35 0.00 45.18 2.94
30 31 5.454966 ACCAACATAAACTTTGGAGTTCCT 58.545 37.500 7.35 0.00 45.18 3.36
31 32 5.784578 ACCAACATAAACTTTGGAGTTCC 57.215 39.130 7.35 0.00 45.18 3.62
65 66 9.209048 TGACCAACCTAGTACAAGTCATATATT 57.791 33.333 0.00 0.00 0.00 1.28
66 67 8.777578 TGACCAACCTAGTACAAGTCATATAT 57.222 34.615 0.00 0.00 0.00 0.86
67 68 8.598202 TTGACCAACCTAGTACAAGTCATATA 57.402 34.615 0.00 0.00 33.21 0.86
68 69 7.490657 TTGACCAACCTAGTACAAGTCATAT 57.509 36.000 0.00 0.00 33.21 1.78
69 70 6.921486 TTGACCAACCTAGTACAAGTCATA 57.079 37.500 0.00 0.00 33.21 2.15
70 71 5.818678 TTGACCAACCTAGTACAAGTCAT 57.181 39.130 0.00 0.00 33.21 3.06
71 72 5.617528 TTTGACCAACCTAGTACAAGTCA 57.382 39.130 0.00 0.00 0.00 3.41
72 73 6.708949 TCAATTTGACCAACCTAGTACAAGTC 59.291 38.462 0.00 0.00 0.00 3.01
73 74 6.485648 GTCAATTTGACCAACCTAGTACAAGT 59.514 38.462 17.07 0.00 41.37 3.16
74 75 6.347402 CGTCAATTTGACCAACCTAGTACAAG 60.347 42.308 20.87 1.46 44.20 3.16
75 76 5.467399 CGTCAATTTGACCAACCTAGTACAA 59.533 40.000 20.87 0.00 44.20 2.41
76 77 4.992319 CGTCAATTTGACCAACCTAGTACA 59.008 41.667 20.87 0.00 44.20 2.90
77 78 5.119743 GTCGTCAATTTGACCAACCTAGTAC 59.880 44.000 20.87 5.03 44.20 2.73
78 79 5.232463 GTCGTCAATTTGACCAACCTAGTA 58.768 41.667 20.87 0.00 44.20 1.82
79 80 4.062991 GTCGTCAATTTGACCAACCTAGT 58.937 43.478 20.87 0.00 44.20 2.57
80 81 4.663636 GTCGTCAATTTGACCAACCTAG 57.336 45.455 20.87 7.72 44.20 3.02
87 88 5.201262 ACCCCTAGGTCGTCAATTTGACC 62.201 52.174 20.87 10.15 46.45 4.02
88 89 2.027469 ACCCCTAGGTCGTCAATTTGAC 60.027 50.000 17.76 17.76 46.45 3.18
89 90 2.262637 ACCCCTAGGTCGTCAATTTGA 58.737 47.619 8.29 0.00 46.45 2.69
90 91 2.781681 ACCCCTAGGTCGTCAATTTG 57.218 50.000 8.29 0.00 46.45 2.32
91 92 2.167075 CGTACCCCTAGGTCGTCAATTT 59.833 50.000 8.29 0.00 46.45 1.82
92 93 1.753073 CGTACCCCTAGGTCGTCAATT 59.247 52.381 8.29 0.00 46.45 2.32
93 94 1.396653 CGTACCCCTAGGTCGTCAAT 58.603 55.000 8.29 0.00 46.45 2.57
94 95 1.315257 GCGTACCCCTAGGTCGTCAA 61.315 60.000 8.29 0.00 46.45 3.18
95 96 1.750399 GCGTACCCCTAGGTCGTCA 60.750 63.158 8.29 0.00 46.45 4.35
96 97 2.828128 CGCGTACCCCTAGGTCGTC 61.828 68.421 8.29 3.46 46.45 4.20
97 98 2.825836 CGCGTACCCCTAGGTCGT 60.826 66.667 8.29 6.00 46.45 4.34
98 99 4.261781 GCGCGTACCCCTAGGTCG 62.262 72.222 8.43 8.12 46.45 4.79
99 100 3.142838 TGCGCGTACCCCTAGGTC 61.143 66.667 8.43 0.00 46.45 3.85
101 102 4.564116 CGTGCGCGTACCCCTAGG 62.564 72.222 21.71 0.06 40.04 3.02
108 109 4.781959 TACAGGGCGTGCGCGTAC 62.782 66.667 22.18 17.94 43.06 3.67
109 110 3.570621 TTTACAGGGCGTGCGCGTA 62.571 57.895 22.18 0.00 43.06 4.42
110 111 4.973055 TTTACAGGGCGTGCGCGT 62.973 61.111 22.18 2.94 43.06 6.01
111 112 4.439472 GTTTACAGGGCGTGCGCG 62.439 66.667 16.86 16.86 43.06 6.86
112 113 4.097863 GGTTTACAGGGCGTGCGC 62.098 66.667 7.17 8.17 41.06 6.09
113 114 3.784412 CGGTTTACAGGGCGTGCG 61.784 66.667 7.17 0.00 0.00 5.34
114 115 2.357760 TCGGTTTACAGGGCGTGC 60.358 61.111 7.17 0.00 0.00 5.34
115 116 0.736325 CTCTCGGTTTACAGGGCGTG 60.736 60.000 5.50 5.50 0.00 5.34
116 117 0.896940 TCTCTCGGTTTACAGGGCGT 60.897 55.000 0.00 0.00 0.00 5.68
117 118 0.179134 CTCTCTCGGTTTACAGGGCG 60.179 60.000 0.00 0.00 0.00 6.13
118 119 1.135333 CTCTCTCTCGGTTTACAGGGC 59.865 57.143 0.00 0.00 0.00 5.19
119 120 1.751924 CCTCTCTCTCGGTTTACAGGG 59.248 57.143 0.00 0.00 0.00 4.45
120 121 2.448453 ACCTCTCTCTCGGTTTACAGG 58.552 52.381 0.00 0.00 0.00 4.00
121 122 4.263435 ACTACCTCTCTCTCGGTTTACAG 58.737 47.826 0.00 0.00 34.76 2.74
122 123 4.298103 ACTACCTCTCTCTCGGTTTACA 57.702 45.455 0.00 0.00 34.76 2.41
123 124 5.294060 CAGTACTACCTCTCTCTCGGTTTAC 59.706 48.000 0.00 0.00 34.76 2.01
124 125 5.188555 TCAGTACTACCTCTCTCTCGGTTTA 59.811 44.000 0.00 0.00 34.76 2.01
125 126 4.019501 TCAGTACTACCTCTCTCTCGGTTT 60.020 45.833 0.00 0.00 34.76 3.27
126 127 3.518705 TCAGTACTACCTCTCTCTCGGTT 59.481 47.826 0.00 0.00 34.76 4.44
127 128 3.106054 TCAGTACTACCTCTCTCTCGGT 58.894 50.000 0.00 0.00 37.31 4.69
128 129 3.823281 TCAGTACTACCTCTCTCTCGG 57.177 52.381 0.00 0.00 0.00 4.63
129 130 5.361427 TCATTCAGTACTACCTCTCTCTCG 58.639 45.833 0.00 0.00 0.00 4.04
130 131 6.770785 ACATCATTCAGTACTACCTCTCTCTC 59.229 42.308 0.00 0.00 0.00 3.20
131 132 6.668645 ACATCATTCAGTACTACCTCTCTCT 58.331 40.000 0.00 0.00 0.00 3.10
132 133 6.952773 ACATCATTCAGTACTACCTCTCTC 57.047 41.667 0.00 0.00 0.00 3.20
133 134 8.056400 AGTTACATCATTCAGTACTACCTCTCT 58.944 37.037 0.00 0.00 0.00 3.10
134 135 8.228035 AGTTACATCATTCAGTACTACCTCTC 57.772 38.462 0.00 0.00 0.00 3.20
135 136 8.056400 AGAGTTACATCATTCAGTACTACCTCT 58.944 37.037 0.00 0.00 0.00 3.69
136 137 8.228035 AGAGTTACATCATTCAGTACTACCTC 57.772 38.462 0.00 0.00 0.00 3.85
137 138 9.869667 ATAGAGTTACATCATTCAGTACTACCT 57.130 33.333 0.00 0.00 0.00 3.08
146 147 9.031360 GCGAAAACTATAGAGTTACATCATTCA 57.969 33.333 6.78 0.00 45.50 2.57
147 148 9.031360 TGCGAAAACTATAGAGTTACATCATTC 57.969 33.333 6.78 2.04 45.50 2.67
148 149 8.818057 GTGCGAAAACTATAGAGTTACATCATT 58.182 33.333 6.78 0.00 45.50 2.57
149 150 8.198109 AGTGCGAAAACTATAGAGTTACATCAT 58.802 33.333 6.78 0.00 45.50 2.45
150 151 7.544622 AGTGCGAAAACTATAGAGTTACATCA 58.455 34.615 6.78 0.00 45.50 3.07
151 152 7.988904 AGTGCGAAAACTATAGAGTTACATC 57.011 36.000 6.78 2.39 45.50 3.06
152 153 9.865321 TTTAGTGCGAAAACTATAGAGTTACAT 57.135 29.630 6.78 0.00 45.50 2.29
153 154 9.350357 CTTTAGTGCGAAAACTATAGAGTTACA 57.650 33.333 6.78 0.00 45.50 2.41
154 155 9.351570 ACTTTAGTGCGAAAACTATAGAGTTAC 57.648 33.333 6.78 0.00 45.50 2.50
157 158 7.972832 GGTACTTTAGTGCGAAAACTATAGAGT 59.027 37.037 6.78 0.00 36.07 3.24
158 159 7.972277 TGGTACTTTAGTGCGAAAACTATAGAG 59.028 37.037 6.78 0.00 36.07 2.43
159 160 7.829725 TGGTACTTTAGTGCGAAAACTATAGA 58.170 34.615 6.78 0.00 36.07 1.98
160 161 7.222224 CCTGGTACTTTAGTGCGAAAACTATAG 59.778 40.741 0.00 0.00 37.58 1.31
161 162 7.037438 CCTGGTACTTTAGTGCGAAAACTATA 58.963 38.462 0.00 0.00 32.78 1.31
162 163 5.873164 CCTGGTACTTTAGTGCGAAAACTAT 59.127 40.000 0.00 0.00 32.78 2.12
163 164 5.010922 TCCTGGTACTTTAGTGCGAAAACTA 59.989 40.000 0.00 0.00 0.00 2.24
164 165 4.062991 CCTGGTACTTTAGTGCGAAAACT 58.937 43.478 0.00 0.00 0.00 2.66
165 166 4.060205 TCCTGGTACTTTAGTGCGAAAAC 58.940 43.478 0.00 0.00 0.00 2.43
166 167 4.312443 CTCCTGGTACTTTAGTGCGAAAA 58.688 43.478 0.00 0.00 0.00 2.29
167 168 3.306502 CCTCCTGGTACTTTAGTGCGAAA 60.307 47.826 0.00 0.00 0.00 3.46
168 169 2.232941 CCTCCTGGTACTTTAGTGCGAA 59.767 50.000 0.00 0.00 0.00 4.70
169 170 1.822990 CCTCCTGGTACTTTAGTGCGA 59.177 52.381 0.00 0.00 0.00 5.10
170 171 1.739371 GCCTCCTGGTACTTTAGTGCG 60.739 57.143 0.00 0.00 35.27 5.34
171 172 1.555533 AGCCTCCTGGTACTTTAGTGC 59.444 52.381 0.00 0.00 35.27 4.40
172 173 3.983044 AAGCCTCCTGGTACTTTAGTG 57.017 47.619 0.00 0.00 35.27 2.74
173 174 4.263374 GGAAAAGCCTCCTGGTACTTTAGT 60.263 45.833 10.26 0.00 32.28 2.24
174 175 4.262617 GGAAAAGCCTCCTGGTACTTTAG 58.737 47.826 10.26 0.00 32.28 1.85
175 176 3.009805 GGGAAAAGCCTCCTGGTACTTTA 59.990 47.826 10.26 0.00 35.63 1.85
176 177 2.225041 GGGAAAAGCCTCCTGGTACTTT 60.225 50.000 0.00 0.00 35.63 2.66
177 178 1.354705 GGGAAAAGCCTCCTGGTACTT 59.645 52.381 0.00 0.00 35.63 2.24
178 179 0.992695 GGGAAAAGCCTCCTGGTACT 59.007 55.000 0.00 0.00 35.63 2.73
179 180 0.992695 AGGGAAAAGCCTCCTGGTAC 59.007 55.000 0.00 0.00 35.63 3.34
180 181 1.633945 GAAGGGAAAAGCCTCCTGGTA 59.366 52.381 0.00 0.00 35.63 3.25
181 182 0.405973 GAAGGGAAAAGCCTCCTGGT 59.594 55.000 0.00 0.00 35.63 4.00
182 183 0.405585 TGAAGGGAAAAGCCTCCTGG 59.594 55.000 0.00 0.00 35.63 4.45
183 184 2.292828 TTGAAGGGAAAAGCCTCCTG 57.707 50.000 0.00 0.00 35.63 3.86
184 185 3.328535 TTTTGAAGGGAAAAGCCTCCT 57.671 42.857 0.00 0.00 35.63 3.69
185 186 5.738619 TTATTTTGAAGGGAAAAGCCTCC 57.261 39.130 0.00 0.00 36.66 4.30
232 233 0.681243 GGTTGCCCTCTCATTCACCC 60.681 60.000 0.00 0.00 0.00 4.61
245 246 4.036852 GGTGAGAGCATTAATAAGGTTGCC 59.963 45.833 0.00 0.00 35.71 4.52
247 248 5.529060 GGAGGTGAGAGCATTAATAAGGTTG 59.471 44.000 0.00 0.00 0.00 3.77
249 250 4.103311 GGGAGGTGAGAGCATTAATAAGGT 59.897 45.833 0.00 0.00 0.00 3.50
256 257 1.568504 AACGGGAGGTGAGAGCATTA 58.431 50.000 0.00 0.00 0.00 1.90
294 295 9.459640 CAATTCATCTTGCAACTATTCCAATAG 57.540 33.333 0.00 4.99 43.15 1.73
309 310 6.448852 TGTCATCAACCAACAATTCATCTTG 58.551 36.000 0.00 0.00 0.00 3.02
318 319 5.620206 AGTAGTCATGTCATCAACCAACAA 58.380 37.500 0.00 0.00 0.00 2.83
366 367 8.121305 TGTAACAATAAGGACATTTCAATGCT 57.879 30.769 0.00 0.00 40.04 3.79
403 404 2.762327 AGGTATGCAAATGCCAAGAAGG 59.238 45.455 2.46 0.00 41.18 3.46
430 431 2.222007 TTGTCAAACAAGCATGGCAC 57.778 45.000 0.00 0.00 32.34 5.01
448 449 2.095263 CGTTGAATGAGCCCGTCAATTT 60.095 45.455 0.00 0.00 39.19 1.82
452 453 1.375396 CCGTTGAATGAGCCCGTCA 60.375 57.895 0.00 0.00 40.38 4.35
463 464 2.701951 AGACTAACTTGACCCCGTTGAA 59.298 45.455 0.00 0.00 0.00 2.69
554 560 3.433598 GGTTGGTATGATCTTAGCTGCCA 60.434 47.826 16.13 5.73 0.00 4.92
562 568 4.441634 GCAGACTACGGTTGGTATGATCTT 60.442 45.833 10.98 0.00 0.00 2.40
563 569 3.068307 GCAGACTACGGTTGGTATGATCT 59.932 47.826 10.98 0.00 0.00 2.75
567 573 2.665649 TGCAGACTACGGTTGGTATG 57.334 50.000 0.00 0.00 0.00 2.39
637 659 8.977505 GTAATGCTAAAAGTCAATTGAGCAAAA 58.022 29.630 18.18 9.23 41.50 2.44
677 699 2.513897 GCGGGACATGTGCTACCC 60.514 66.667 17.44 13.34 39.02 3.69
747 2006 7.951591 AGCAAACAAGGAAATTATGTTACAGT 58.048 30.769 0.00 0.00 36.33 3.55
749 2008 8.177119 AGAGCAAACAAGGAAATTATGTTACA 57.823 30.769 0.00 0.00 36.33 2.41
750 2009 8.296713 TGAGAGCAAACAAGGAAATTATGTTAC 58.703 33.333 0.00 0.00 36.33 2.50
751 2010 8.402798 TGAGAGCAAACAAGGAAATTATGTTA 57.597 30.769 0.00 0.00 36.33 2.41
752 2011 7.288810 TGAGAGCAAACAAGGAAATTATGTT 57.711 32.000 0.00 0.00 38.85 2.71
753 2012 6.899393 TGAGAGCAAACAAGGAAATTATGT 57.101 33.333 0.00 0.00 0.00 2.29
844 2105 4.928661 AACTGACGATTTCTGTATGCAC 57.071 40.909 0.00 0.00 35.44 4.57
853 2114 7.253651 GGAAAAACAACTGAAACTGACGATTTC 60.254 37.037 0.00 0.00 36.73 2.17
879 2148 6.346477 TCGGTGGATAATTCCTCTTGATAG 57.654 41.667 0.00 0.00 43.07 2.08
882 2151 4.743651 GCATCGGTGGATAATTCCTCTTGA 60.744 45.833 0.00 0.00 43.07 3.02
903 2184 0.878523 GCCGGAGTATATTGTGCGCA 60.879 55.000 5.66 5.66 0.00 6.09
916 2197 4.161295 TGAATCTGGCCGCCGGAG 62.161 66.667 25.04 8.71 42.74 4.63
923 2204 0.107165 GGTGTAGGGTGAATCTGGCC 60.107 60.000 0.00 0.00 0.00 5.36
930 2211 0.768622 CCACTTGGGTGTAGGGTGAA 59.231 55.000 0.00 0.00 41.53 3.18
957 2238 2.172505 AGGTTGGATGATTATGTCGCCA 59.827 45.455 0.00 0.00 33.61 5.69
1167 2460 2.338620 CTGTTGAGACGGGCGTCA 59.661 61.111 0.00 0.00 46.76 4.35
1243 2536 1.513158 CGAGAGCCACCGAGATGTT 59.487 57.895 0.00 0.00 0.00 2.71
1290 2583 1.572085 CGAGAGGCTTGGTGTGCTTG 61.572 60.000 0.00 0.00 0.00 4.01
1511 2804 2.362120 CGTAGGTGACCTCCCCGT 60.362 66.667 7.77 0.00 34.61 5.28
1618 2911 4.771127 GGTGACCTCAGCGAACAA 57.229 55.556 0.00 0.00 34.50 2.83
1681 2974 9.794719 TCCTATTCGATAATACTCTGAAGAAGA 57.205 33.333 0.00 0.00 0.00 2.87
1691 2984 7.713734 TCGGGAATTCCTATTCGATAATACT 57.286 36.000 23.63 0.00 40.91 2.12
1703 3000 3.709653 AGTAGTGCATTCGGGAATTCCTA 59.290 43.478 23.63 9.99 35.95 2.94
1746 3043 2.848302 GCTCACAGAAATGCGCAAATAC 59.152 45.455 17.11 6.66 30.51 1.89
1796 3094 2.828549 GGCGGCCATTGATTCCGT 60.829 61.111 15.62 0.00 44.58 4.69
1846 3349 3.054802 AGGTGAAGACCAAAGCTGATAGG 60.055 47.826 0.00 0.00 45.98 2.57
1995 3531 1.380403 CGTGCCCACAGGTGTTTGAA 61.380 55.000 0.00 0.00 34.57 2.69
1996 3532 1.821759 CGTGCCCACAGGTGTTTGA 60.822 57.895 0.00 0.00 34.57 2.69
1997 3533 2.058829 GACGTGCCCACAGGTGTTTG 62.059 60.000 0.00 0.00 44.58 2.93
1998 3534 1.822186 GACGTGCCCACAGGTGTTT 60.822 57.895 0.00 0.00 44.58 2.83
2003 3539 4.742201 CTCGGACGTGCCCACAGG 62.742 72.222 0.00 0.00 37.69 4.00
2053 3593 6.256053 AGGTATCTGGTTGTGGAAATGAAAT 58.744 36.000 0.00 0.00 0.00 2.17
2055 3595 5.222027 TGAGGTATCTGGTTGTGGAAATGAA 60.222 40.000 0.00 0.00 0.00 2.57
2058 3598 4.927267 TGAGGTATCTGGTTGTGGAAAT 57.073 40.909 0.00 0.00 0.00 2.17
2115 3656 3.245519 GCTCCGCTTAAGATTAGGTTTCG 59.754 47.826 6.67 0.00 0.00 3.46
2188 3730 1.927710 GCCGACGACCGTATCAATACC 60.928 57.143 0.00 0.00 36.31 2.73
2195 3737 2.923426 TACCTCGCCGACGACCGTAT 62.923 60.000 0.00 0.00 45.12 3.06
2227 3769 3.131577 GTCCCGTAAGATGGTATGTGTCA 59.868 47.826 0.00 0.00 43.02 3.58
2234 3776 2.569059 CTCGAGTCCCGTAAGATGGTA 58.431 52.381 3.62 0.00 43.02 3.25
2239 3781 2.110967 CGCCTCGAGTCCCGTAAGA 61.111 63.158 12.31 0.00 43.02 2.10
2242 3784 2.821366 GACGCCTCGAGTCCCGTA 60.821 66.667 18.65 0.00 39.75 4.02
2258 3800 0.482887 TAGAGGATGGGAGATGGCGA 59.517 55.000 0.00 0.00 0.00 5.54
2261 3803 3.541242 AGAGTAGAGGATGGGAGATGG 57.459 52.381 0.00 0.00 0.00 3.51
2327 3870 1.025812 GGTCGGAGATGACATCGTCT 58.974 55.000 9.77 3.19 44.36 4.18
2330 3873 3.855630 GAGGTCGGAGATGACATCG 57.144 57.895 9.77 0.00 39.50 3.84
2335 3878 2.103373 CCTTGAAGAGGTCGGAGATGA 58.897 52.381 0.00 0.00 40.95 2.92
2336 3879 2.100584 CTCCTTGAAGAGGTCGGAGATG 59.899 54.545 0.00 0.00 46.39 2.90
2337 3880 2.383855 CTCCTTGAAGAGGTCGGAGAT 58.616 52.381 0.00 0.00 46.39 2.75
2338 3881 1.840737 CTCCTTGAAGAGGTCGGAGA 58.159 55.000 0.00 0.00 46.39 3.71
2346 3889 0.734253 CGTGCGACCTCCTTGAAGAG 60.734 60.000 0.00 0.00 0.00 2.85
2347 3890 1.289066 CGTGCGACCTCCTTGAAGA 59.711 57.895 0.00 0.00 0.00 2.87
2348 3891 2.383527 GCGTGCGACCTCCTTGAAG 61.384 63.158 0.00 0.00 0.00 3.02
2349 3892 2.357034 GCGTGCGACCTCCTTGAA 60.357 61.111 0.00 0.00 0.00 2.69
2350 3893 4.373116 GGCGTGCGACCTCCTTGA 62.373 66.667 0.00 0.00 0.00 3.02
2366 3909 3.995506 AAATCCTCGGCTTGGCGGG 62.996 63.158 16.08 12.97 0.00 6.13
2367 3910 1.595093 AAAAATCCTCGGCTTGGCGG 61.595 55.000 16.08 7.30 0.00 6.13
2368 3911 0.456653 CAAAAATCCTCGGCTTGGCG 60.457 55.000 10.34 10.34 0.00 5.69
2369 3912 0.887933 TCAAAAATCCTCGGCTTGGC 59.112 50.000 0.00 0.00 0.00 4.52
2370 3913 2.672195 GCTTCAAAAATCCTCGGCTTGG 60.672 50.000 0.00 0.00 0.00 3.61
2371 3914 2.599659 GCTTCAAAAATCCTCGGCTTG 58.400 47.619 0.00 0.00 0.00 4.01
2372 3915 1.546029 GGCTTCAAAAATCCTCGGCTT 59.454 47.619 0.00 0.00 0.00 4.35
2373 3916 1.177401 GGCTTCAAAAATCCTCGGCT 58.823 50.000 0.00 0.00 0.00 5.52
2374 3917 0.179163 CGGCTTCAAAAATCCTCGGC 60.179 55.000 0.00 0.00 0.00 5.54
2375 3918 1.448985 TCGGCTTCAAAAATCCTCGG 58.551 50.000 0.00 0.00 0.00 4.63
2376 3919 3.119849 ACATTCGGCTTCAAAAATCCTCG 60.120 43.478 0.00 0.00 0.00 4.63
2377 3920 4.156739 AGACATTCGGCTTCAAAAATCCTC 59.843 41.667 0.00 0.00 0.00 3.71
2378 3921 4.082125 AGACATTCGGCTTCAAAAATCCT 58.918 39.130 0.00 0.00 0.00 3.24
2379 3922 4.440839 AGACATTCGGCTTCAAAAATCC 57.559 40.909 0.00 0.00 0.00 3.01
2380 3923 5.938322 TGTAGACATTCGGCTTCAAAAATC 58.062 37.500 0.00 0.00 0.00 2.17
2381 3924 5.957842 TGTAGACATTCGGCTTCAAAAAT 57.042 34.783 0.00 0.00 0.00 1.82
2382 3925 5.759506 TTGTAGACATTCGGCTTCAAAAA 57.240 34.783 0.00 0.00 0.00 1.94
2383 3926 5.471797 TCATTGTAGACATTCGGCTTCAAAA 59.528 36.000 0.00 0.00 0.00 2.44
2384 3927 5.000591 TCATTGTAGACATTCGGCTTCAAA 58.999 37.500 0.00 0.00 0.00 2.69
2385 3928 4.391830 GTCATTGTAGACATTCGGCTTCAA 59.608 41.667 0.00 0.00 38.40 2.69
2386 3929 3.932710 GTCATTGTAGACATTCGGCTTCA 59.067 43.478 0.00 0.00 38.40 3.02
2387 3930 3.932710 TGTCATTGTAGACATTCGGCTTC 59.067 43.478 0.00 0.00 43.18 3.86
2388 3931 3.937814 TGTCATTGTAGACATTCGGCTT 58.062 40.909 0.00 0.00 43.18 4.35
2389 3932 3.610040 TGTCATTGTAGACATTCGGCT 57.390 42.857 0.00 0.00 43.18 5.52
2390 3933 4.391830 TCTTTGTCATTGTAGACATTCGGC 59.608 41.667 0.00 0.00 46.90 5.54
2391 3934 6.368791 TCTTCTTTGTCATTGTAGACATTCGG 59.631 38.462 0.00 0.00 46.90 4.30
2392 3935 7.351414 TCTTCTTTGTCATTGTAGACATTCG 57.649 36.000 0.00 0.00 46.90 3.34
2393 3936 7.604164 TCCTCTTCTTTGTCATTGTAGACATTC 59.396 37.037 0.00 0.00 46.90 2.67
2394 3937 7.453393 TCCTCTTCTTTGTCATTGTAGACATT 58.547 34.615 0.00 0.00 46.90 2.71
2395 3938 7.009179 TCCTCTTCTTTGTCATTGTAGACAT 57.991 36.000 0.00 0.00 46.90 3.06
2396 3939 6.267699 TCTCCTCTTCTTTGTCATTGTAGACA 59.732 38.462 0.00 0.00 46.12 3.41
2397 3940 6.692486 TCTCCTCTTCTTTGTCATTGTAGAC 58.308 40.000 0.00 0.00 38.99 2.59
2398 3941 6.071108 CCTCTCCTCTTCTTTGTCATTGTAGA 60.071 42.308 0.00 0.00 0.00 2.59
2399 3942 6.105333 CCTCTCCTCTTCTTTGTCATTGTAG 58.895 44.000 0.00 0.00 0.00 2.74
2400 3943 5.544176 ACCTCTCCTCTTCTTTGTCATTGTA 59.456 40.000 0.00 0.00 0.00 2.41
2401 3944 4.349342 ACCTCTCCTCTTCTTTGTCATTGT 59.651 41.667 0.00 0.00 0.00 2.71
2402 3945 4.904241 ACCTCTCCTCTTCTTTGTCATTG 58.096 43.478 0.00 0.00 0.00 2.82
2403 3946 4.594920 TGACCTCTCCTCTTCTTTGTCATT 59.405 41.667 0.00 0.00 0.00 2.57
2404 3947 4.163427 TGACCTCTCCTCTTCTTTGTCAT 58.837 43.478 0.00 0.00 0.00 3.06
2405 3948 3.576118 CTGACCTCTCCTCTTCTTTGTCA 59.424 47.826 0.00 0.00 0.00 3.58
2406 3949 3.829601 TCTGACCTCTCCTCTTCTTTGTC 59.170 47.826 0.00 0.00 0.00 3.18
2407 3950 3.576550 GTCTGACCTCTCCTCTTCTTTGT 59.423 47.826 0.00 0.00 0.00 2.83
2408 3951 3.576118 TGTCTGACCTCTCCTCTTCTTTG 59.424 47.826 5.17 0.00 0.00 2.77
2409 3952 3.576550 GTGTCTGACCTCTCCTCTTCTTT 59.423 47.826 5.17 0.00 0.00 2.52
2410 3953 3.161866 GTGTCTGACCTCTCCTCTTCTT 58.838 50.000 5.17 0.00 0.00 2.52
2411 3954 2.556559 GGTGTCTGACCTCTCCTCTTCT 60.557 54.545 5.17 0.00 42.25 2.85
2412 3955 1.822371 GGTGTCTGACCTCTCCTCTTC 59.178 57.143 5.17 0.00 42.25 2.87
2413 3956 1.551329 GGGTGTCTGACCTCTCCTCTT 60.551 57.143 5.17 0.00 45.33 2.85
2414 3957 0.040499 GGGTGTCTGACCTCTCCTCT 59.960 60.000 5.17 0.00 45.33 3.69
2415 3958 0.251832 TGGGTGTCTGACCTCTCCTC 60.252 60.000 5.17 0.00 45.33 3.71
2416 3959 0.191064 TTGGGTGTCTGACCTCTCCT 59.809 55.000 5.17 0.00 45.33 3.69
2417 3960 0.321996 GTTGGGTGTCTGACCTCTCC 59.678 60.000 5.17 3.04 45.33 3.71
2418 3961 1.273886 GAGTTGGGTGTCTGACCTCTC 59.726 57.143 5.17 0.00 45.33 3.20
2419 3962 1.343069 GAGTTGGGTGTCTGACCTCT 58.657 55.000 5.17 0.00 45.33 3.69
2420 3963 1.048601 TGAGTTGGGTGTCTGACCTC 58.951 55.000 5.17 4.17 45.33 3.85
2421 3964 0.759346 GTGAGTTGGGTGTCTGACCT 59.241 55.000 5.17 0.00 45.33 3.85
2422 3965 0.250338 GGTGAGTTGGGTGTCTGACC 60.250 60.000 5.17 0.00 45.28 4.02
2423 3966 0.468226 TGGTGAGTTGGGTGTCTGAC 59.532 55.000 0.00 0.00 0.00 3.51
2424 3967 1.140852 CTTGGTGAGTTGGGTGTCTGA 59.859 52.381 0.00 0.00 0.00 3.27
2425 3968 1.597742 CTTGGTGAGTTGGGTGTCTG 58.402 55.000 0.00 0.00 0.00 3.51
2426 3969 0.179018 GCTTGGTGAGTTGGGTGTCT 60.179 55.000 0.00 0.00 0.00 3.41
2427 3970 0.465460 TGCTTGGTGAGTTGGGTGTC 60.465 55.000 0.00 0.00 0.00 3.67
2428 3971 0.751643 GTGCTTGGTGAGTTGGGTGT 60.752 55.000 0.00 0.00 0.00 4.16
2429 3972 1.785041 CGTGCTTGGTGAGTTGGGTG 61.785 60.000 0.00 0.00 0.00 4.61
2430 3973 1.525995 CGTGCTTGGTGAGTTGGGT 60.526 57.895 0.00 0.00 0.00 4.51
2431 3974 2.260869 CCGTGCTTGGTGAGTTGGG 61.261 63.158 0.00 0.00 0.00 4.12
2432 3975 1.101049 AACCGTGCTTGGTGAGTTGG 61.101 55.000 1.02 0.00 42.89 3.77
2433 3976 0.029300 CAACCGTGCTTGGTGAGTTG 59.971 55.000 1.02 0.00 42.89 3.16
2434 3977 0.393808 ACAACCGTGCTTGGTGAGTT 60.394 50.000 1.02 0.00 42.89 3.01
2435 3978 0.814010 GACAACCGTGCTTGGTGAGT 60.814 55.000 1.02 4.03 42.89 3.41
2436 3979 1.507141 GGACAACCGTGCTTGGTGAG 61.507 60.000 1.02 1.07 42.89 3.51
2437 3980 1.525077 GGACAACCGTGCTTGGTGA 60.525 57.895 1.02 0.00 42.89 4.02
2438 3981 1.507141 GAGGACAACCGTGCTTGGTG 61.507 60.000 1.02 0.00 44.94 4.17
2439 3982 1.227853 GAGGACAACCGTGCTTGGT 60.228 57.895 0.00 0.00 44.94 3.67
2440 3983 2.317609 CGAGGACAACCGTGCTTGG 61.318 63.158 0.00 0.00 44.94 3.61
2441 3984 1.300620 TCGAGGACAACCGTGCTTG 60.301 57.895 0.00 0.00 44.94 4.01
2442 3985 1.300697 GTCGAGGACAACCGTGCTT 60.301 57.895 0.00 0.00 44.94 3.91
2444 3987 1.282930 GAAGTCGAGGACAACCGTGC 61.283 60.000 0.00 0.00 41.83 5.34
2445 3988 0.666577 GGAAGTCGAGGACAACCGTG 60.667 60.000 0.00 0.00 41.83 4.94
2446 3989 0.826672 AGGAAGTCGAGGACAACCGT 60.827 55.000 0.00 0.00 41.83 4.83
2447 3990 0.109226 GAGGAAGTCGAGGACAACCG 60.109 60.000 0.00 0.00 41.83 4.44
2448 3991 0.246910 GGAGGAAGTCGAGGACAACC 59.753 60.000 0.00 1.56 34.60 3.77
2449 3992 1.258676 AGGAGGAAGTCGAGGACAAC 58.741 55.000 0.00 0.00 34.60 3.32
2450 3993 2.620886 CCTAGGAGGAAGTCGAGGACAA 60.621 54.545 1.05 0.00 37.67 3.18
2451 3994 1.064611 CCTAGGAGGAAGTCGAGGACA 60.065 57.143 1.05 0.00 37.67 4.02
2452 3995 1.212441 TCCTAGGAGGAAGTCGAGGAC 59.788 57.143 7.62 0.00 42.51 3.85
2453 3996 1.491332 CTCCTAGGAGGAAGTCGAGGA 59.509 57.143 28.68 0.00 45.28 3.71
2454 3997 1.975660 CTCCTAGGAGGAAGTCGAGG 58.024 60.000 28.68 1.89 45.28 4.63
2455 3998 1.314730 GCTCCTAGGAGGAAGTCGAG 58.685 60.000 34.75 12.11 45.28 4.04
2456 3999 0.624254 TGCTCCTAGGAGGAAGTCGA 59.376 55.000 34.75 10.15 45.28 4.20
2457 4000 1.475403 TTGCTCCTAGGAGGAAGTCG 58.525 55.000 34.63 13.75 45.28 4.18
2461 4004 1.279271 GCTTGTTGCTCCTAGGAGGAA 59.721 52.381 34.63 34.63 45.28 3.36
2462 4005 0.905357 GCTTGTTGCTCCTAGGAGGA 59.095 55.000 34.75 31.48 43.43 3.71
2463 4006 0.107459 GGCTTGTTGCTCCTAGGAGG 60.107 60.000 34.75 20.44 42.19 4.30
2464 4007 0.107459 GGGCTTGTTGCTCCTAGGAG 60.107 60.000 31.35 31.35 44.56 3.69
2465 4008 1.899437 CGGGCTTGTTGCTCCTAGGA 61.899 60.000 11.98 11.98 39.51 2.94
2466 4009 1.450312 CGGGCTTGTTGCTCCTAGG 60.450 63.158 0.82 0.82 39.51 3.02
2467 4010 0.741221 GTCGGGCTTGTTGCTCCTAG 60.741 60.000 0.00 0.00 39.51 3.02
2468 4011 1.295423 GTCGGGCTTGTTGCTCCTA 59.705 57.895 0.00 0.00 39.51 2.94
2469 4012 2.032681 GTCGGGCTTGTTGCTCCT 59.967 61.111 0.00 0.00 39.51 3.69
2470 4013 3.423154 CGTCGGGCTTGTTGCTCC 61.423 66.667 0.00 0.00 39.51 4.70
2471 4014 1.959226 TTCGTCGGGCTTGTTGCTC 60.959 57.895 0.00 0.00 42.39 4.26
2472 4015 2.110213 TTCGTCGGGCTTGTTGCT 59.890 55.556 0.00 0.00 42.39 3.91
2473 4016 0.947180 TAGTTCGTCGGGCTTGTTGC 60.947 55.000 0.00 0.00 41.94 4.17
2474 4017 1.393539 CATAGTTCGTCGGGCTTGTTG 59.606 52.381 0.00 0.00 0.00 3.33
2475 4018 1.001633 ACATAGTTCGTCGGGCTTGTT 59.998 47.619 0.00 0.00 0.00 2.83
2476 4019 0.606604 ACATAGTTCGTCGGGCTTGT 59.393 50.000 0.00 0.00 0.00 3.16
2477 4020 1.278238 GACATAGTTCGTCGGGCTTG 58.722 55.000 0.00 0.00 0.00 4.01
2478 4021 0.892755 TGACATAGTTCGTCGGGCTT 59.107 50.000 0.00 0.00 36.11 4.35
2479 4022 0.172803 GTGACATAGTTCGTCGGGCT 59.827 55.000 0.00 0.00 36.11 5.19
2480 4023 0.804933 GGTGACATAGTTCGTCGGGC 60.805 60.000 0.00 0.00 36.11 6.13
2481 4024 0.815734 AGGTGACATAGTTCGTCGGG 59.184 55.000 0.00 0.00 36.11 5.14
2482 4025 1.202268 GGAGGTGACATAGTTCGTCGG 60.202 57.143 0.00 0.00 36.11 4.79
2483 4026 1.531264 CGGAGGTGACATAGTTCGTCG 60.531 57.143 0.00 0.00 36.11 5.12
2484 4027 1.741706 TCGGAGGTGACATAGTTCGTC 59.258 52.381 0.00 0.00 0.00 4.20
2485 4028 1.471684 GTCGGAGGTGACATAGTTCGT 59.528 52.381 0.00 0.00 38.75 3.85
2486 4029 1.471287 TGTCGGAGGTGACATAGTTCG 59.529 52.381 0.00 0.00 43.62 3.95
2494 4037 1.134965 CCTGAAGATGTCGGAGGTGAC 60.135 57.143 0.00 0.00 39.37 3.67
2495 4038 1.186200 CCTGAAGATGTCGGAGGTGA 58.814 55.000 0.00 0.00 34.07 4.02
2496 4039 0.176680 CCCTGAAGATGTCGGAGGTG 59.823 60.000 0.00 0.00 34.07 4.00
2497 4040 0.978146 CCCCTGAAGATGTCGGAGGT 60.978 60.000 0.00 0.00 34.07 3.85
2498 4041 1.690219 CCCCCTGAAGATGTCGGAGG 61.690 65.000 0.00 0.00 34.07 4.30
2499 4042 1.826024 CCCCCTGAAGATGTCGGAG 59.174 63.158 0.00 0.00 34.07 4.63
2500 4043 4.050313 CCCCCTGAAGATGTCGGA 57.950 61.111 0.00 0.00 34.07 4.55
2514 4057 0.693049 ATGATCTTATGCCGACCCCC 59.307 55.000 0.00 0.00 0.00 5.40
2515 4058 2.154462 CAATGATCTTATGCCGACCCC 58.846 52.381 0.00 0.00 0.00 4.95
2516 4059 2.851195 ACAATGATCTTATGCCGACCC 58.149 47.619 0.00 0.00 0.00 4.46
2517 4060 3.876914 TGAACAATGATCTTATGCCGACC 59.123 43.478 0.00 0.00 0.00 4.79
2518 4061 5.679734 ATGAACAATGATCTTATGCCGAC 57.320 39.130 0.00 0.00 0.00 4.79
2519 4062 5.821995 TGAATGAACAATGATCTTATGCCGA 59.178 36.000 0.00 0.00 0.00 5.54
2520 4063 6.063640 TGAATGAACAATGATCTTATGCCG 57.936 37.500 0.00 0.00 0.00 5.69
2521 4064 7.437267 CCTTTGAATGAACAATGATCTTATGCC 59.563 37.037 0.00 0.00 0.00 4.40
2522 4065 8.192774 TCCTTTGAATGAACAATGATCTTATGC 58.807 33.333 0.00 0.00 0.00 3.14
2523 4066 9.512435 GTCCTTTGAATGAACAATGATCTTATG 57.488 33.333 0.00 0.00 0.00 1.90
2524 4067 9.471702 AGTCCTTTGAATGAACAATGATCTTAT 57.528 29.630 0.00 0.00 0.00 1.73
2525 4068 8.868522 AGTCCTTTGAATGAACAATGATCTTA 57.131 30.769 0.00 0.00 0.00 2.10
2526 4069 7.094032 GGAGTCCTTTGAATGAACAATGATCTT 60.094 37.037 0.41 0.00 0.00 2.40
2527 4070 6.376581 GGAGTCCTTTGAATGAACAATGATCT 59.623 38.462 0.41 0.00 0.00 2.75
2528 4071 6.405176 GGGAGTCCTTTGAATGAACAATGATC 60.405 42.308 9.58 0.00 0.00 2.92
2529 4072 5.420104 GGGAGTCCTTTGAATGAACAATGAT 59.580 40.000 9.58 0.00 0.00 2.45
2530 4073 4.766891 GGGAGTCCTTTGAATGAACAATGA 59.233 41.667 9.58 0.00 0.00 2.57
2531 4074 4.768968 AGGGAGTCCTTTGAATGAACAATG 59.231 41.667 9.58 0.00 41.56 2.82
2532 4075 5.003096 AGGGAGTCCTTTGAATGAACAAT 57.997 39.130 9.58 0.00 41.56 2.71
2533 4076 4.141274 TGAGGGAGTCCTTTGAATGAACAA 60.141 41.667 9.58 0.00 45.05 2.83
2534 4077 3.394274 TGAGGGAGTCCTTTGAATGAACA 59.606 43.478 9.58 0.00 45.05 3.18
2535 4078 4.021102 TGAGGGAGTCCTTTGAATGAAC 57.979 45.455 9.58 0.00 45.05 3.18
2536 4079 4.350816 TCTTGAGGGAGTCCTTTGAATGAA 59.649 41.667 9.58 0.00 45.05 2.57
2537 4080 3.909995 TCTTGAGGGAGTCCTTTGAATGA 59.090 43.478 9.58 0.00 45.05 2.57
2538 4081 4.006319 GTCTTGAGGGAGTCCTTTGAATG 58.994 47.826 9.58 0.00 45.05 2.67
2539 4082 3.009584 GGTCTTGAGGGAGTCCTTTGAAT 59.990 47.826 9.58 0.00 45.05 2.57
2540 4083 2.372172 GGTCTTGAGGGAGTCCTTTGAA 59.628 50.000 9.58 0.00 45.05 2.69
2541 4084 1.978580 GGTCTTGAGGGAGTCCTTTGA 59.021 52.381 9.58 0.00 45.05 2.69
2542 4085 1.981495 AGGTCTTGAGGGAGTCCTTTG 59.019 52.381 9.58 0.00 45.05 2.77
2543 4086 2.261729 GAGGTCTTGAGGGAGTCCTTT 58.738 52.381 9.58 0.00 45.05 3.11
2544 4087 1.893210 CGAGGTCTTGAGGGAGTCCTT 60.893 57.143 9.58 0.00 45.05 3.36
2546 4089 1.950973 GCGAGGTCTTGAGGGAGTCC 61.951 65.000 0.00 0.00 0.00 3.85
2547 4090 1.513622 GCGAGGTCTTGAGGGAGTC 59.486 63.158 0.00 0.00 0.00 3.36
2548 4091 1.985116 GGCGAGGTCTTGAGGGAGT 60.985 63.158 0.00 0.00 0.00 3.85
2549 4092 2.896443 GGCGAGGTCTTGAGGGAG 59.104 66.667 0.00 0.00 0.00 4.30
2550 4093 3.068691 CGGCGAGGTCTTGAGGGA 61.069 66.667 0.00 0.00 0.00 4.20
2551 4094 3.068691 TCGGCGAGGTCTTGAGGG 61.069 66.667 4.99 0.00 0.00 4.30
2552 4095 2.492090 CTCGGCGAGGTCTTGAGG 59.508 66.667 28.52 0.25 0.00 3.86
2553 4096 2.202676 GCTCGGCGAGGTCTTGAG 60.203 66.667 35.03 11.46 0.00 3.02
2554 4097 2.989253 TGCTCGGCGAGGTCTTGA 60.989 61.111 35.03 4.15 0.00 3.02
2555 4098 2.507992 CTGCTCGGCGAGGTCTTG 60.508 66.667 35.03 12.98 0.00 3.02
2556 4099 2.992114 ACTGCTCGGCGAGGTCTT 60.992 61.111 35.03 10.53 0.00 3.01
2557 4100 2.538512 TAGACTGCTCGGCGAGGTCT 62.539 60.000 34.58 34.58 38.33 3.85
2558 4101 1.654954 TTAGACTGCTCGGCGAGGTC 61.655 60.000 35.03 30.98 0.00 3.85
2559 4102 1.658686 CTTAGACTGCTCGGCGAGGT 61.659 60.000 35.03 25.85 0.00 3.85
2560 4103 1.064946 CTTAGACTGCTCGGCGAGG 59.935 63.158 35.03 22.90 0.00 4.63
2561 4104 0.248296 GTCTTAGACTGCTCGGCGAG 60.248 60.000 31.40 31.40 0.00 5.03
2562 4105 1.801332 GTCTTAGACTGCTCGGCGA 59.199 57.895 10.14 10.14 0.00 5.54
2563 4106 1.583967 CGTCTTAGACTGCTCGGCG 60.584 63.158 10.83 0.00 0.00 6.46
2564 4107 1.226717 CCGTCTTAGACTGCTCGGC 60.227 63.158 10.83 0.00 0.00 5.54
2565 4108 1.226717 GCCGTCTTAGACTGCTCGG 60.227 63.158 19.03 11.81 39.17 4.63
2566 4109 0.798771 GTGCCGTCTTAGACTGCTCG 60.799 60.000 24.61 6.31 41.95 5.03
2567 4110 0.243907 TGTGCCGTCTTAGACTGCTC 59.756 55.000 24.61 21.69 41.95 4.26
2568 4111 0.898320 ATGTGCCGTCTTAGACTGCT 59.102 50.000 24.61 6.74 41.95 4.24
2569 4112 1.661112 GAATGTGCCGTCTTAGACTGC 59.339 52.381 19.39 19.39 41.82 4.40
2570 4113 1.920574 CGAATGTGCCGTCTTAGACTG 59.079 52.381 10.83 5.10 0.00 3.51
2571 4114 1.135083 CCGAATGTGCCGTCTTAGACT 60.135 52.381 10.83 0.00 0.00 3.24
2572 4115 1.278238 CCGAATGTGCCGTCTTAGAC 58.722 55.000 1.64 1.64 0.00 2.59
2573 4116 0.892755 ACCGAATGTGCCGTCTTAGA 59.107 50.000 0.00 0.00 0.00 2.10
2574 4117 1.659098 GAACCGAATGTGCCGTCTTAG 59.341 52.381 0.00 0.00 0.00 2.18
2575 4118 1.717194 GAACCGAATGTGCCGTCTTA 58.283 50.000 0.00 0.00 0.00 2.10
2576 4119 1.289109 CGAACCGAATGTGCCGTCTT 61.289 55.000 0.00 0.00 0.00 3.01
2577 4120 1.736645 CGAACCGAATGTGCCGTCT 60.737 57.895 0.00 0.00 0.00 4.18
2578 4121 2.736682 CCGAACCGAATGTGCCGTC 61.737 63.158 0.00 0.00 0.00 4.79
2579 4122 2.740826 CCGAACCGAATGTGCCGT 60.741 61.111 0.00 0.00 0.00 5.68
2580 4123 4.160635 GCCGAACCGAATGTGCCG 62.161 66.667 0.00 0.00 0.00 5.69
2581 4124 1.933115 AATGCCGAACCGAATGTGCC 61.933 55.000 0.00 0.00 0.00 5.01
2582 4125 0.730265 TAATGCCGAACCGAATGTGC 59.270 50.000 0.00 0.00 0.00 4.57
2583 4126 2.477189 GGTTAATGCCGAACCGAATGTG 60.477 50.000 0.00 0.00 37.22 3.21
2584 4127 1.741145 GGTTAATGCCGAACCGAATGT 59.259 47.619 0.00 0.00 37.22 2.71
2585 4128 2.468532 GGTTAATGCCGAACCGAATG 57.531 50.000 0.00 0.00 37.22 2.67
2597 4140 5.067674 TAGCTTGGCTGCATTAAGGTTAATG 59.932 40.000 15.34 15.34 44.19 1.90
2598 4141 4.026052 AGCTTGGCTGCATTAAGGTTAAT 58.974 39.130 0.50 0.00 37.57 1.40
2599 4142 3.430453 AGCTTGGCTGCATTAAGGTTAA 58.570 40.909 0.50 0.00 37.57 2.01
2600 4143 3.085952 AGCTTGGCTGCATTAAGGTTA 57.914 42.857 0.50 0.00 37.57 2.85
2601 4144 1.928868 AGCTTGGCTGCATTAAGGTT 58.071 45.000 0.50 0.00 37.57 3.50
2602 4145 2.369394 GTAGCTTGGCTGCATTAAGGT 58.631 47.619 15.70 15.70 40.83 3.50
2603 4146 1.678101 GGTAGCTTGGCTGCATTAAGG 59.322 52.381 0.50 0.00 42.86 2.69
2604 4147 1.331756 CGGTAGCTTGGCTGCATTAAG 59.668 52.381 0.50 4.16 42.86 1.85
2605 4148 1.065782 TCGGTAGCTTGGCTGCATTAA 60.066 47.619 0.50 0.00 42.86 1.40
2606 4149 0.539518 TCGGTAGCTTGGCTGCATTA 59.460 50.000 0.50 0.00 42.86 1.90
2607 4150 0.107017 ATCGGTAGCTTGGCTGCATT 60.107 50.000 0.50 0.00 42.86 3.56
2608 4151 0.816825 CATCGGTAGCTTGGCTGCAT 60.817 55.000 0.50 0.00 42.86 3.96
2609 4152 1.450134 CATCGGTAGCTTGGCTGCA 60.450 57.895 0.50 0.00 42.86 4.41
2610 4153 2.182842 CCATCGGTAGCTTGGCTGC 61.183 63.158 0.00 0.52 40.10 5.25
2611 4154 0.107456 ATCCATCGGTAGCTTGGCTG 59.893 55.000 0.00 0.00 40.10 4.85
2612 4155 0.394565 GATCCATCGGTAGCTTGGCT 59.605 55.000 0.00 0.00 43.41 4.75
2613 4156 0.106708 TGATCCATCGGTAGCTTGGC 59.893 55.000 0.00 0.00 0.00 4.52
2614 4157 1.414181 ACTGATCCATCGGTAGCTTGG 59.586 52.381 0.00 0.00 44.21 3.61
2615 4158 2.898729 ACTGATCCATCGGTAGCTTG 57.101 50.000 0.00 0.00 44.21 4.01
2616 4159 2.293677 CGTACTGATCCATCGGTAGCTT 59.706 50.000 8.28 0.00 46.21 3.74
2617 4160 1.880675 CGTACTGATCCATCGGTAGCT 59.119 52.381 8.28 0.00 46.21 3.32
2618 4161 1.666311 GCGTACTGATCCATCGGTAGC 60.666 57.143 8.28 10.01 46.21 3.58
2619 4162 1.880675 AGCGTACTGATCCATCGGTAG 59.119 52.381 8.28 5.10 46.21 3.18
2620 4163 1.977056 AGCGTACTGATCCATCGGTA 58.023 50.000 4.39 4.39 44.21 4.02
2622 4165 2.351835 CCTTAGCGTACTGATCCATCGG 60.352 54.545 0.00 0.00 39.11 4.18
2623 4166 2.351835 CCCTTAGCGTACTGATCCATCG 60.352 54.545 0.00 0.00 0.00 3.84
2624 4167 2.628657 ACCCTTAGCGTACTGATCCATC 59.371 50.000 0.00 0.00 0.00 3.51
2625 4168 2.679082 ACCCTTAGCGTACTGATCCAT 58.321 47.619 0.00 0.00 0.00 3.41
2626 4169 2.154567 ACCCTTAGCGTACTGATCCA 57.845 50.000 0.00 0.00 0.00 3.41
2627 4170 2.295629 GGTACCCTTAGCGTACTGATCC 59.704 54.545 0.00 0.00 36.99 3.36
2628 4171 3.220940 AGGTACCCTTAGCGTACTGATC 58.779 50.000 8.74 0.00 36.99 2.92
2629 4172 3.309600 AGGTACCCTTAGCGTACTGAT 57.690 47.619 8.74 0.00 36.99 2.90
2630 4173 2.814805 AGGTACCCTTAGCGTACTGA 57.185 50.000 8.74 0.00 36.99 3.41
2631 4174 2.883386 CCTAGGTACCCTTAGCGTACTG 59.117 54.545 8.74 0.00 36.99 2.74
2632 4175 2.780010 TCCTAGGTACCCTTAGCGTACT 59.220 50.000 8.74 0.00 36.99 2.73
2633 4176 3.145286 CTCCTAGGTACCCTTAGCGTAC 58.855 54.545 8.74 0.00 34.61 3.67
2634 4177 2.107204 CCTCCTAGGTACCCTTAGCGTA 59.893 54.545 8.74 0.00 34.61 4.42
2635 4178 1.133544 CCTCCTAGGTACCCTTAGCGT 60.134 57.143 8.74 0.00 34.61 5.07
2636 4179 1.618487 CCTCCTAGGTACCCTTAGCG 58.382 60.000 8.74 0.00 34.61 4.26
2637 4180 1.340088 GCCTCCTAGGTACCCTTAGC 58.660 60.000 8.74 0.58 37.80 3.09
2638 4181 1.822457 CGGCCTCCTAGGTACCCTTAG 60.822 61.905 8.74 4.68 37.80 2.18
2639 4182 0.186873 CGGCCTCCTAGGTACCCTTA 59.813 60.000 8.74 0.00 37.80 2.69
2640 4183 1.075450 CGGCCTCCTAGGTACCCTT 60.075 63.158 8.74 0.00 37.80 3.95
2641 4184 0.995675 TACGGCCTCCTAGGTACCCT 60.996 60.000 8.74 0.00 37.80 4.34
2642 4185 0.825425 GTACGGCCTCCTAGGTACCC 60.825 65.000 8.74 6.48 37.80 3.69
2643 4186 0.106519 TGTACGGCCTCCTAGGTACC 60.107 60.000 9.08 2.73 37.80 3.34
2644 4187 1.028130 GTGTACGGCCTCCTAGGTAC 58.972 60.000 9.08 5.26 37.80 3.34
2645 4188 0.106519 GGTGTACGGCCTCCTAGGTA 60.107 60.000 9.08 0.00 37.80 3.08
2646 4189 1.380920 GGTGTACGGCCTCCTAGGT 60.381 63.158 9.08 0.00 37.80 3.08
2647 4190 0.184451 TAGGTGTACGGCCTCCTAGG 59.816 60.000 11.48 0.82 37.54 3.02
2648 4191 1.606903 CTAGGTGTACGGCCTCCTAG 58.393 60.000 11.48 13.76 41.96 3.02
2649 4192 0.921896 ACTAGGTGTACGGCCTCCTA 59.078 55.000 11.48 4.44 37.54 2.94
2650 4193 0.921896 TACTAGGTGTACGGCCTCCT 59.078 55.000 11.48 3.42 37.54 3.69
2651 4194 1.028130 GTACTAGGTGTACGGCCTCC 58.972 60.000 11.48 0.00 41.58 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.