Multiple sequence alignment - TraesCS4B01G092500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G092500 chr4B 100.000 4831 0 0 1 4831 95320012 95315182 0.000000e+00 8922.0
1 TraesCS4B01G092500 chr4B 93.640 2280 112 17 802 3067 95365043 95367303 0.000000e+00 3376.0
2 TraesCS4B01G092500 chr4B 92.114 951 56 6 3203 4150 95367293 95368227 0.000000e+00 1323.0
3 TraesCS4B01G092500 chr4B 84.000 1225 130 32 1853 3067 95218154 95216986 0.000000e+00 1116.0
4 TraesCS4B01G092500 chr4B 83.187 1023 137 15 1891 2901 95108916 95107917 0.000000e+00 904.0
5 TraesCS4B01G092500 chr4B 88.905 685 65 4 4145 4829 95368407 95369080 0.000000e+00 833.0
6 TraesCS4B01G092500 chr4B 84.043 470 54 15 3436 3886 95107125 95106658 2.670000e-117 433.0
7 TraesCS4B01G092500 chr4B 85.522 297 20 9 831 1126 95219151 95218877 6.120000e-74 289.0
8 TraesCS4B01G092500 chr4B 83.843 229 16 12 824 1051 95109828 95109620 1.060000e-46 198.0
9 TraesCS4B01G092500 chr4B 88.793 116 4 3 676 791 95364886 95364992 3.030000e-27 134.0
10 TraesCS4B01G092500 chr4B 100.000 32 0 0 1814 1845 141589871 141589840 5.220000e-05 60.2
11 TraesCS4B01G092500 chr4A 94.813 2140 86 13 928 3060 531246772 531248893 0.000000e+00 3314.0
12 TraesCS4B01G092500 chr4A 91.300 1115 92 5 3211 4321 531248898 531250011 0.000000e+00 1517.0
13 TraesCS4B01G092500 chr4A 83.110 1196 159 22 1886 3065 531326432 531327600 0.000000e+00 1050.0
14 TraesCS4B01G092500 chr4A 82.000 1200 139 38 1880 3067 531312332 531313466 0.000000e+00 948.0
15 TraesCS4B01G092500 chr4A 88.281 512 56 4 4319 4829 531251389 531251897 1.150000e-170 610.0
16 TraesCS4B01G092500 chr4A 84.083 289 16 16 667 942 531246484 531246755 8.030000e-63 252.0
17 TraesCS4B01G092500 chr4A 81.865 193 18 8 475 656 531302522 531302708 3.900000e-31 147.0
18 TraesCS4B01G092500 chr4A 83.333 174 13 9 831 1003 531303666 531303824 3.900000e-31 147.0
19 TraesCS4B01G092500 chr4A 90.291 103 10 0 3067 3169 115279255 115279153 8.430000e-28 135.0
20 TraesCS4B01G092500 chr4A 92.727 55 3 1 4281 4335 110187551 110187498 1.440000e-10 78.7
21 TraesCS4B01G092500 chr4D 82.733 1193 132 39 1886 3067 64616863 64615734 0.000000e+00 994.0
22 TraesCS4B01G092500 chr4D 78.635 894 125 39 887 1769 64617752 64616914 2.560000e-147 532.0
23 TraesCS4B01G092500 chr4D 84.887 311 42 2 1891 2196 64605600 64605290 4.700000e-80 309.0
24 TraesCS4B01G092500 chr4D 76.301 346 81 1 4477 4822 47848501 47848157 2.970000e-42 183.0
25 TraesCS4B01G092500 chr4D 78.344 314 36 17 824 1136 64606531 64606249 1.790000e-39 174.0
26 TraesCS4B01G092500 chr5D 78.219 629 106 20 4209 4822 110812435 110813047 1.640000e-99 374.0
27 TraesCS4B01G092500 chr5D 79.679 374 60 11 4467 4829 410478344 410478712 6.200000e-64 255.0
28 TraesCS4B01G092500 chr5D 75.299 251 43 17 4204 4447 175255193 175255431 8.550000e-18 102.0
29 TraesCS4B01G092500 chr5B 76.850 635 118 22 4202 4822 121893837 121893218 1.000000e-86 331.0
30 TraesCS4B01G092500 chr5B 77.412 425 77 12 4193 4614 526565928 526566336 8.080000e-58 235.0
31 TraesCS4B01G092500 chr5B 89.524 105 10 1 3066 3169 90827954 90828058 1.090000e-26 132.0
32 TraesCS4B01G092500 chr5B 75.000 264 44 11 4194 4450 510820498 510820250 8.550000e-18 102.0
33 TraesCS4B01G092500 chr5B 83.146 89 12 2 4438 4523 343837955 343838043 1.440000e-10 78.7
34 TraesCS4B01G092500 chr3A 77.453 479 86 14 1297 1765 32415198 32415664 2.870000e-67 267.0
35 TraesCS4B01G092500 chr3A 86.525 141 12 3 3068 3202 600020251 600020112 1.080000e-31 148.0
36 TraesCS4B01G092500 chr3A 97.143 35 1 0 1806 1840 450013263 450013229 5.220000e-05 60.2
37 TraesCS4B01G092500 chr2B 79.505 283 55 3 4481 4762 76049197 76049477 1.060000e-46 198.0
38 TraesCS4B01G092500 chr2B 79.505 283 55 3 4481 4762 76062899 76063179 1.060000e-46 198.0
39 TraesCS4B01G092500 chr2B 87.500 104 10 3 3067 3169 774396064 774396165 3.050000e-22 117.0
40 TraesCS4B01G092500 chr2B 87.013 77 6 4 4281 4354 772114503 772114428 3.100000e-12 84.2
41 TraesCS4B01G092500 chr7B 80.816 245 47 0 1520 1764 619169862 619170106 4.930000e-45 193.0
42 TraesCS4B01G092500 chr6B 81.900 221 28 8 4288 4505 159298390 159298179 4.970000e-40 176.0
43 TraesCS4B01G092500 chr6B 87.736 106 10 2 3067 3169 663764578 663764473 2.360000e-23 121.0
44 TraesCS4B01G092500 chr6B 95.122 41 0 2 1814 1854 303478322 303478284 4.040000e-06 63.9
45 TraesCS4B01G092500 chr1B 78.601 243 52 0 1524 1766 512678373 512678131 1.390000e-35 161.0
46 TraesCS4B01G092500 chr1B 100.000 28 0 0 4194 4221 394505476 394505449 9.000000e-03 52.8
47 TraesCS4B01G092500 chr2D 80.203 197 38 1 1976 2171 11061305 11061109 3.900000e-31 147.0
48 TraesCS4B01G092500 chr2D 92.593 81 6 0 3089 3169 497994819 497994739 3.050000e-22 117.0
49 TraesCS4B01G092500 chr5A 88.462 104 11 1 3067 3169 570525061 570525164 1.830000e-24 124.0
50 TraesCS4B01G092500 chr6D 87.379 103 13 0 3067 3169 190570366 190570468 8.490000e-23 119.0
51 TraesCS4B01G092500 chr2A 80.606 165 22 6 4288 4447 457925327 457925486 8.490000e-23 119.0
52 TraesCS4B01G092500 chr2A 78.417 139 29 1 4478 4616 7228381 7228518 6.660000e-14 89.8
53 TraesCS4B01G092500 chr3B 87.368 95 12 0 3075 3169 612399864 612399770 5.110000e-20 110.0
54 TraesCS4B01G092500 chr3B 97.143 35 1 0 1806 1840 431583485 431583451 5.220000e-05 60.2
55 TraesCS4B01G092500 chr3D 75.325 231 45 9 4228 4451 133928032 133927807 3.080000e-17 100.0
56 TraesCS4B01G092500 chr1D 94.872 39 2 0 1806 1844 233793746 233793708 1.450000e-05 62.1
57 TraesCS4B01G092500 chr6A 100.000 32 0 0 1814 1845 589545869 589545900 5.220000e-05 60.2
58 TraesCS4B01G092500 chr1A 100.000 32 0 0 1814 1845 360862525 360862556 5.220000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G092500 chr4B 95315182 95320012 4830 True 8922.000000 8922 100.00000 1 4831 1 chr4B.!!$R1 4830
1 TraesCS4B01G092500 chr4B 95364886 95369080 4194 False 1416.500000 3376 90.86300 676 4829 4 chr4B.!!$F1 4153
2 TraesCS4B01G092500 chr4B 95216986 95219151 2165 True 702.500000 1116 84.76100 831 3067 2 chr4B.!!$R4 2236
3 TraesCS4B01G092500 chr4B 95106658 95109828 3170 True 511.666667 904 83.69100 824 3886 3 chr4B.!!$R3 3062
4 TraesCS4B01G092500 chr4A 531246484 531251897 5413 False 1423.250000 3314 89.61925 667 4829 4 chr4A.!!$F3 4162
5 TraesCS4B01G092500 chr4A 531326432 531327600 1168 False 1050.000000 1050 83.11000 1886 3065 1 chr4A.!!$F2 1179
6 TraesCS4B01G092500 chr4A 531312332 531313466 1134 False 948.000000 948 82.00000 1880 3067 1 chr4A.!!$F1 1187
7 TraesCS4B01G092500 chr4D 64615734 64617752 2018 True 763.000000 994 80.68400 887 3067 2 chr4D.!!$R3 2180
8 TraesCS4B01G092500 chr4D 64605290 64606531 1241 True 241.500000 309 81.61550 824 2196 2 chr4D.!!$R2 1372
9 TraesCS4B01G092500 chr5D 110812435 110813047 612 False 374.000000 374 78.21900 4209 4822 1 chr5D.!!$F1 613
10 TraesCS4B01G092500 chr5B 121893218 121893837 619 True 331.000000 331 76.85000 4202 4822 1 chr5B.!!$R1 620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
496 497 0.034574 TGTGTGTGCTCCCTTGTTGT 60.035 50.0 0.00 0.00 0.00 3.32 F
506 507 0.037975 CCCTTGTTGTTGGCTCATGC 60.038 55.0 0.00 0.00 38.76 4.06 F
612 613 0.038618 GCGCCCCGATTTTGTTCTTT 60.039 50.0 0.00 0.00 0.00 2.52 F
791 801 0.109272 CTCGCAGTGTACACGGACAT 60.109 55.0 27.27 4.59 36.20 3.06 F
957 1040 0.811616 CCTTCGGCTAGCAGCGAAAT 60.812 55.0 23.09 0.00 43.62 2.17 F
2659 2872 1.110442 AGAGCAGACCCTCAATCGAG 58.890 55.0 0.00 0.00 39.16 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2380 2591 1.371183 CTCCCTTGCTGACGGTTCA 59.629 57.895 0.00 0.0 0.00 3.18 R
2525 2738 4.437682 TGTGTCCTTCTGTCCAATTTCT 57.562 40.909 0.00 0.0 0.00 2.52 R
2569 2782 0.462789 CCTGGAGGCCATTTGCATTC 59.537 55.000 5.01 0.0 43.89 2.67 R
2686 2899 0.251354 TTGCCCTTTTGCTTGCACAA 59.749 45.000 0.00 0.0 32.63 3.33 R
2797 3029 3.192844 CGGCCAGAGTAGACTACTGAAAA 59.807 47.826 19.90 0.0 39.59 2.29 R
4531 6805 0.036765 TATTGTTTGGGACGCTCGCT 60.037 50.000 0.00 0.0 0.00 4.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.000938 CAACAAGGAAGAGGTTGCTGC 60.001 52.381 0.00 0.00 33.98 5.25
23 24 0.475906 ACAAGGAAGAGGTTGCTGCT 59.524 50.000 0.00 0.00 33.98 4.24
24 25 1.133668 ACAAGGAAGAGGTTGCTGCTT 60.134 47.619 0.00 0.00 33.98 3.91
25 26 1.268899 CAAGGAAGAGGTTGCTGCTTG 59.731 52.381 0.00 0.00 33.98 4.01
26 27 0.251077 AGGAAGAGGTTGCTGCTTGG 60.251 55.000 0.00 0.00 32.14 3.61
27 28 0.250901 GGAAGAGGTTGCTGCTTGGA 60.251 55.000 0.00 0.00 0.00 3.53
28 29 1.163554 GAAGAGGTTGCTGCTTGGAG 58.836 55.000 0.00 0.00 0.00 3.86
29 30 0.892814 AAGAGGTTGCTGCTTGGAGC 60.893 55.000 7.18 7.18 42.82 4.70
30 31 1.303155 GAGGTTGCTGCTTGGAGCT 60.303 57.895 14.70 0.00 42.97 4.09
31 32 1.303155 AGGTTGCTGCTTGGAGCTC 60.303 57.895 14.70 4.71 42.97 4.09
32 33 1.601759 GGTTGCTGCTTGGAGCTCA 60.602 57.895 17.19 0.00 42.97 4.26
33 34 1.578423 GTTGCTGCTTGGAGCTCAC 59.422 57.895 17.19 5.63 42.97 3.51
34 35 1.601759 TTGCTGCTTGGAGCTCACC 60.602 57.895 17.19 0.00 42.97 4.02
35 36 2.033141 GCTGCTTGGAGCTCACCA 59.967 61.111 17.19 2.42 42.97 4.17
36 37 1.601759 GCTGCTTGGAGCTCACCAA 60.602 57.895 17.19 11.37 46.02 3.67
43 44 3.576078 TTGGAGCTCACCAAAGAAGAA 57.424 42.857 17.19 0.00 45.36 2.52
44 45 3.576078 TGGAGCTCACCAAAGAAGAAA 57.424 42.857 17.19 0.00 36.96 2.52
45 46 3.214328 TGGAGCTCACCAAAGAAGAAAC 58.786 45.455 17.19 0.00 36.96 2.78
46 47 2.554462 GGAGCTCACCAAAGAAGAAACC 59.446 50.000 17.19 0.00 0.00 3.27
47 48 3.214328 GAGCTCACCAAAGAAGAAACCA 58.786 45.455 9.40 0.00 0.00 3.67
48 49 3.631250 AGCTCACCAAAGAAGAAACCAA 58.369 40.909 0.00 0.00 0.00 3.67
49 50 4.023291 AGCTCACCAAAGAAGAAACCAAA 58.977 39.130 0.00 0.00 0.00 3.28
50 51 4.112634 GCTCACCAAAGAAGAAACCAAAC 58.887 43.478 0.00 0.00 0.00 2.93
51 52 4.682787 CTCACCAAAGAAGAAACCAAACC 58.317 43.478 0.00 0.00 0.00 3.27
52 53 4.349365 TCACCAAAGAAGAAACCAAACCT 58.651 39.130 0.00 0.00 0.00 3.50
53 54 4.159506 TCACCAAAGAAGAAACCAAACCTG 59.840 41.667 0.00 0.00 0.00 4.00
54 55 4.159506 CACCAAAGAAGAAACCAAACCTGA 59.840 41.667 0.00 0.00 0.00 3.86
55 56 4.775253 ACCAAAGAAGAAACCAAACCTGAA 59.225 37.500 0.00 0.00 0.00 3.02
56 57 5.247337 ACCAAAGAAGAAACCAAACCTGAAA 59.753 36.000 0.00 0.00 0.00 2.69
57 58 5.812127 CCAAAGAAGAAACCAAACCTGAAAG 59.188 40.000 0.00 0.00 0.00 2.62
58 59 4.655762 AGAAGAAACCAAACCTGAAAGC 57.344 40.909 0.00 0.00 0.00 3.51
59 60 3.384789 AGAAGAAACCAAACCTGAAAGCC 59.615 43.478 0.00 0.00 0.00 4.35
60 61 2.745968 AGAAACCAAACCTGAAAGCCA 58.254 42.857 0.00 0.00 0.00 4.75
61 62 2.695147 AGAAACCAAACCTGAAAGCCAG 59.305 45.455 0.00 0.00 42.55 4.85
62 63 0.752658 AACCAAACCTGAAAGCCAGC 59.247 50.000 0.00 0.00 41.57 4.85
63 64 1.286880 CCAAACCTGAAAGCCAGCG 59.713 57.895 0.00 0.00 41.57 5.18
64 65 1.455383 CCAAACCTGAAAGCCAGCGT 61.455 55.000 0.00 0.00 41.57 5.07
65 66 1.234821 CAAACCTGAAAGCCAGCGTA 58.765 50.000 0.00 0.00 41.57 4.42
66 67 1.197721 CAAACCTGAAAGCCAGCGTAG 59.802 52.381 0.00 0.00 41.57 3.51
80 81 3.442996 CGTAGCTTGGGTGGAGAAG 57.557 57.895 0.00 0.00 0.00 2.85
81 82 0.895530 CGTAGCTTGGGTGGAGAAGA 59.104 55.000 0.00 0.00 0.00 2.87
82 83 1.275291 CGTAGCTTGGGTGGAGAAGAA 59.725 52.381 0.00 0.00 0.00 2.52
83 84 2.289444 CGTAGCTTGGGTGGAGAAGAAA 60.289 50.000 0.00 0.00 0.00 2.52
84 85 3.619979 CGTAGCTTGGGTGGAGAAGAAAT 60.620 47.826 0.00 0.00 0.00 2.17
85 86 3.078891 AGCTTGGGTGGAGAAGAAATC 57.921 47.619 0.00 0.00 0.00 2.17
86 87 2.376518 AGCTTGGGTGGAGAAGAAATCA 59.623 45.455 0.00 0.00 0.00 2.57
87 88 3.011032 AGCTTGGGTGGAGAAGAAATCAT 59.989 43.478 0.00 0.00 0.00 2.45
88 89 3.766051 GCTTGGGTGGAGAAGAAATCATT 59.234 43.478 0.00 0.00 0.00 2.57
89 90 4.381292 GCTTGGGTGGAGAAGAAATCATTG 60.381 45.833 0.00 0.00 0.00 2.82
90 91 4.387026 TGGGTGGAGAAGAAATCATTGT 57.613 40.909 0.00 0.00 0.00 2.71
91 92 4.739793 TGGGTGGAGAAGAAATCATTGTT 58.260 39.130 0.00 0.00 0.00 2.83
92 93 4.523943 TGGGTGGAGAAGAAATCATTGTTG 59.476 41.667 0.00 0.00 0.00 3.33
93 94 4.082026 GGGTGGAGAAGAAATCATTGTTGG 60.082 45.833 0.00 0.00 0.00 3.77
94 95 4.488879 GTGGAGAAGAAATCATTGTTGGC 58.511 43.478 0.00 0.00 0.00 4.52
95 96 4.022068 GTGGAGAAGAAATCATTGTTGGCA 60.022 41.667 0.00 0.00 0.00 4.92
96 97 4.022068 TGGAGAAGAAATCATTGTTGGCAC 60.022 41.667 0.00 0.00 0.00 5.01
97 98 4.161333 GAGAAGAAATCATTGTTGGCACG 58.839 43.478 0.00 0.00 0.00 5.34
98 99 2.352503 AGAAATCATTGTTGGCACGC 57.647 45.000 0.00 0.00 0.00 5.34
99 100 1.612950 AGAAATCATTGTTGGCACGCA 59.387 42.857 0.00 0.00 0.00 5.24
100 101 1.987770 GAAATCATTGTTGGCACGCAG 59.012 47.619 0.00 0.00 0.00 5.18
101 102 0.388907 AATCATTGTTGGCACGCAGC 60.389 50.000 0.00 0.00 44.65 5.25
110 111 4.090057 GCACGCAGCGGAAACCTC 62.090 66.667 21.15 0.00 0.00 3.85
111 112 2.357517 CACGCAGCGGAAACCTCT 60.358 61.111 21.15 0.00 0.00 3.69
112 113 1.961277 CACGCAGCGGAAACCTCTT 60.961 57.895 21.15 0.00 0.00 2.85
113 114 0.669318 CACGCAGCGGAAACCTCTTA 60.669 55.000 21.15 0.00 0.00 2.10
114 115 0.669625 ACGCAGCGGAAACCTCTTAC 60.670 55.000 21.15 0.00 0.00 2.34
115 116 0.389948 CGCAGCGGAAACCTCTTACT 60.390 55.000 7.00 0.00 0.00 2.24
116 117 1.079503 GCAGCGGAAACCTCTTACTG 58.920 55.000 0.00 0.00 0.00 2.74
117 118 1.079503 CAGCGGAAACCTCTTACTGC 58.920 55.000 0.00 0.00 35.23 4.40
118 119 0.685097 AGCGGAAACCTCTTACTGCA 59.315 50.000 0.00 0.00 37.14 4.41
119 120 0.796927 GCGGAAACCTCTTACTGCAC 59.203 55.000 0.00 0.00 35.13 4.57
120 121 1.068474 CGGAAACCTCTTACTGCACG 58.932 55.000 0.00 0.00 0.00 5.34
121 122 1.439679 GGAAACCTCTTACTGCACGG 58.560 55.000 0.00 0.00 0.00 4.94
122 123 0.796927 GAAACCTCTTACTGCACGGC 59.203 55.000 0.00 0.00 0.00 5.68
123 124 0.949105 AAACCTCTTACTGCACGGCG 60.949 55.000 4.80 4.80 0.00 6.46
124 125 2.509336 CCTCTTACTGCACGGCGG 60.509 66.667 13.24 0.66 41.29 6.13
125 126 2.571757 CTCTTACTGCACGGCGGA 59.428 61.111 13.24 0.00 38.46 5.54
126 127 1.517257 CTCTTACTGCACGGCGGAG 60.517 63.158 13.24 6.57 38.46 4.63
140 141 4.358810 GGAGCTCCGGAAGTAGGT 57.641 61.111 19.06 0.00 0.00 3.08
141 142 1.817209 GGAGCTCCGGAAGTAGGTG 59.183 63.158 19.06 0.00 0.00 4.00
142 143 1.677637 GGAGCTCCGGAAGTAGGTGG 61.678 65.000 19.06 0.00 0.00 4.61
143 144 2.187163 GCTCCGGAAGTAGGTGGC 59.813 66.667 5.23 0.00 0.00 5.01
144 145 2.359967 GCTCCGGAAGTAGGTGGCT 61.360 63.158 5.23 0.00 0.00 4.75
145 146 1.517832 CTCCGGAAGTAGGTGGCTG 59.482 63.158 5.23 0.00 0.00 4.85
146 147 2.125106 CCGGAAGTAGGTGGCTGC 60.125 66.667 0.00 0.00 0.00 5.25
147 148 2.125106 CGGAAGTAGGTGGCTGCC 60.125 66.667 12.87 12.87 0.00 4.85
148 149 2.125106 GGAAGTAGGTGGCTGCCG 60.125 66.667 14.98 0.00 0.00 5.69
149 150 2.663196 GAAGTAGGTGGCTGCCGT 59.337 61.111 14.98 3.62 0.00 5.68
150 151 1.741770 GAAGTAGGTGGCTGCCGTG 60.742 63.158 14.98 0.00 0.00 4.94
151 152 3.901797 AAGTAGGTGGCTGCCGTGC 62.902 63.158 14.98 6.68 0.00 5.34
160 161 4.514577 CTGCCGTGCCCCGTAGAG 62.515 72.222 0.00 0.00 33.66 2.43
168 169 3.066190 CCCCGTAGAGGCACACGA 61.066 66.667 7.05 0.00 40.56 4.35
169 170 2.181021 CCCGTAGAGGCACACGAC 59.819 66.667 7.05 0.00 40.56 4.34
170 171 2.632544 CCCGTAGAGGCACACGACA 61.633 63.158 7.05 0.00 40.56 4.35
171 172 1.154016 CCGTAGAGGCACACGACAG 60.154 63.158 7.05 0.00 40.56 3.51
172 173 1.154016 CGTAGAGGCACACGACAGG 60.154 63.158 0.00 0.00 40.56 4.00
173 174 1.863662 CGTAGAGGCACACGACAGGT 61.864 60.000 0.00 0.00 40.56 4.00
181 182 2.030562 CACGACAGGTGGGTGGAC 59.969 66.667 0.00 0.00 43.16 4.02
182 183 3.612681 ACGACAGGTGGGTGGACG 61.613 66.667 0.00 0.00 0.00 4.79
184 185 4.699522 GACAGGTGGGTGGACGCC 62.700 72.222 0.00 0.00 41.35 5.68
186 187 4.704833 CAGGTGGGTGGACGCCAG 62.705 72.222 4.09 0.00 43.47 4.85
243 244 4.154347 GGAGAGGCAGCCGACAGG 62.154 72.222 5.55 0.00 41.62 4.00
244 245 4.154347 GAGAGGCAGCCGACAGGG 62.154 72.222 5.55 0.00 38.20 4.45
245 246 4.704103 AGAGGCAGCCGACAGGGA 62.704 66.667 5.55 0.00 38.47 4.20
246 247 4.154347 GAGGCAGCCGACAGGGAG 62.154 72.222 5.55 0.00 38.47 4.30
249 250 4.828925 GCAGCCGACAGGGAGCTC 62.829 72.222 4.71 4.71 38.47 4.09
250 251 3.385384 CAGCCGACAGGGAGCTCA 61.385 66.667 17.19 0.00 38.47 4.26
251 252 3.386237 AGCCGACAGGGAGCTCAC 61.386 66.667 17.19 13.15 38.47 3.51
252 253 4.803426 GCCGACAGGGAGCTCACG 62.803 72.222 17.19 11.07 38.47 4.35
253 254 4.803426 CCGACAGGGAGCTCACGC 62.803 72.222 17.19 6.26 38.47 5.34
254 255 4.803426 CGACAGGGAGCTCACGCC 62.803 72.222 17.19 7.78 36.60 5.68
255 256 3.386237 GACAGGGAGCTCACGCCT 61.386 66.667 17.19 10.23 35.77 5.52
256 257 2.037367 ACAGGGAGCTCACGCCTA 59.963 61.111 17.19 0.00 35.77 3.93
257 258 2.286127 GACAGGGAGCTCACGCCTAC 62.286 65.000 17.19 7.02 35.77 3.18
258 259 2.760385 AGGGAGCTCACGCCTACC 60.760 66.667 17.19 5.39 35.77 3.18
259 260 3.075005 GGGAGCTCACGCCTACCA 61.075 66.667 17.19 0.00 35.77 3.25
260 261 2.496817 GGAGCTCACGCCTACCAG 59.503 66.667 17.19 0.00 36.60 4.00
261 262 2.202810 GAGCTCACGCCTACCAGC 60.203 66.667 9.40 0.00 36.60 4.85
262 263 2.681778 AGCTCACGCCTACCAGCT 60.682 61.111 0.00 0.00 37.40 4.24
263 264 2.202810 GCTCACGCCTACCAGCTC 60.203 66.667 0.00 0.00 0.00 4.09
264 265 3.006756 GCTCACGCCTACCAGCTCA 62.007 63.158 0.00 0.00 0.00 4.26
265 266 1.153745 CTCACGCCTACCAGCTCAC 60.154 63.158 0.00 0.00 0.00 3.51
266 267 2.507102 CACGCCTACCAGCTCACG 60.507 66.667 0.00 0.00 0.00 4.35
267 268 4.436998 ACGCCTACCAGCTCACGC 62.437 66.667 0.00 0.00 0.00 5.34
269 270 2.202810 GCCTACCAGCTCACGCTC 60.203 66.667 0.00 0.00 45.15 5.03
270 271 3.006756 GCCTACCAGCTCACGCTCA 62.007 63.158 0.00 0.00 45.15 4.26
271 272 1.153745 CCTACCAGCTCACGCTCAC 60.154 63.158 0.00 0.00 45.15 3.51
272 273 1.586541 CTACCAGCTCACGCTCACA 59.413 57.895 0.00 0.00 45.15 3.58
273 274 0.734253 CTACCAGCTCACGCTCACAC 60.734 60.000 0.00 0.00 45.15 3.82
274 275 1.179174 TACCAGCTCACGCTCACACT 61.179 55.000 0.00 0.00 45.15 3.55
275 276 1.301244 CCAGCTCACGCTCACACTT 60.301 57.895 0.00 0.00 45.15 3.16
276 277 1.287730 CCAGCTCACGCTCACACTTC 61.288 60.000 0.00 0.00 45.15 3.01
277 278 1.372251 AGCTCACGCTCACACTTCG 60.372 57.895 0.00 0.00 45.15 3.79
278 279 1.661821 GCTCACGCTCACACTTCGT 60.662 57.895 0.00 0.00 36.84 3.85
279 280 1.609840 GCTCACGCTCACACTTCGTC 61.610 60.000 0.00 0.00 33.84 4.20
280 281 0.039978 CTCACGCTCACACTTCGTCT 60.040 55.000 0.00 0.00 33.84 4.18
281 282 0.384309 TCACGCTCACACTTCGTCTT 59.616 50.000 0.00 0.00 33.84 3.01
282 283 0.778815 CACGCTCACACTTCGTCTTC 59.221 55.000 0.00 0.00 33.84 2.87
283 284 0.318784 ACGCTCACACTTCGTCTTCC 60.319 55.000 0.00 0.00 0.00 3.46
284 285 1.337817 CGCTCACACTTCGTCTTCCG 61.338 60.000 0.00 0.00 38.13 4.30
285 286 1.009389 GCTCACACTTCGTCTTCCGG 61.009 60.000 0.00 0.00 37.11 5.14
286 287 0.388649 CTCACACTTCGTCTTCCGGG 60.389 60.000 0.00 0.00 37.11 5.73
287 288 1.374252 CACACTTCGTCTTCCGGGG 60.374 63.158 0.00 0.00 37.11 5.73
288 289 1.835712 ACACTTCGTCTTCCGGGGT 60.836 57.895 0.00 0.00 37.11 4.95
289 290 1.370064 CACTTCGTCTTCCGGGGTT 59.630 57.895 0.00 0.00 37.11 4.11
290 291 0.250166 CACTTCGTCTTCCGGGGTTT 60.250 55.000 0.00 0.00 37.11 3.27
291 292 0.471191 ACTTCGTCTTCCGGGGTTTT 59.529 50.000 0.00 0.00 37.11 2.43
292 293 0.872388 CTTCGTCTTCCGGGGTTTTG 59.128 55.000 0.00 0.00 37.11 2.44
293 294 1.167781 TTCGTCTTCCGGGGTTTTGC 61.168 55.000 0.00 0.00 37.11 3.68
294 295 1.599797 CGTCTTCCGGGGTTTTGCT 60.600 57.895 0.00 0.00 0.00 3.91
295 296 1.852067 CGTCTTCCGGGGTTTTGCTG 61.852 60.000 0.00 0.00 0.00 4.41
296 297 0.536460 GTCTTCCGGGGTTTTGCTGA 60.536 55.000 0.00 0.00 0.00 4.26
297 298 0.536460 TCTTCCGGGGTTTTGCTGAC 60.536 55.000 0.00 0.00 0.00 3.51
298 299 1.852067 CTTCCGGGGTTTTGCTGACG 61.852 60.000 0.00 0.00 0.00 4.35
299 300 2.281208 CCGGGGTTTTGCTGACGA 60.281 61.111 0.00 0.00 0.00 4.20
300 301 2.613506 CCGGGGTTTTGCTGACGAC 61.614 63.158 0.00 0.00 0.00 4.34
301 302 1.890041 CGGGGTTTTGCTGACGACA 60.890 57.895 0.00 0.00 0.00 4.35
302 303 1.440938 CGGGGTTTTGCTGACGACAA 61.441 55.000 0.00 0.00 0.00 3.18
303 304 0.741915 GGGGTTTTGCTGACGACAAA 59.258 50.000 0.00 0.00 35.30 2.83
304 305 1.535226 GGGGTTTTGCTGACGACAAAC 60.535 52.381 0.00 0.00 36.77 2.93
306 307 1.062880 GGTTTTGCTGACGACAAACGA 59.937 47.619 0.00 0.00 45.77 3.85
307 308 2.476519 GGTTTTGCTGACGACAAACGAA 60.477 45.455 0.00 0.00 45.77 3.85
308 309 2.445453 TTTGCTGACGACAAACGAAC 57.555 45.000 0.00 0.00 45.77 3.95
309 310 1.647346 TTGCTGACGACAAACGAACT 58.353 45.000 0.00 0.00 45.77 3.01
310 311 1.647346 TGCTGACGACAAACGAACTT 58.353 45.000 0.00 0.00 45.77 2.66
311 312 2.004017 TGCTGACGACAAACGAACTTT 58.996 42.857 0.00 0.00 45.77 2.66
312 313 2.222931 TGCTGACGACAAACGAACTTTG 60.223 45.455 0.00 0.00 45.77 2.77
313 314 2.029970 GCTGACGACAAACGAACTTTGA 59.970 45.455 4.20 0.00 41.81 2.69
314 315 3.841372 GCTGACGACAAACGAACTTTGAG 60.841 47.826 4.20 1.34 41.81 3.02
315 316 3.255725 TGACGACAAACGAACTTTGAGT 58.744 40.909 4.20 4.02 41.81 3.41
316 317 4.422840 TGACGACAAACGAACTTTGAGTA 58.577 39.130 4.20 0.00 41.81 2.59
317 318 4.863689 TGACGACAAACGAACTTTGAGTAA 59.136 37.500 4.20 0.00 41.81 2.24
318 319 5.134978 ACGACAAACGAACTTTGAGTAAC 57.865 39.130 4.20 0.00 41.81 2.50
319 320 4.866486 ACGACAAACGAACTTTGAGTAACT 59.134 37.500 4.20 0.00 41.81 2.24
320 321 6.035843 ACGACAAACGAACTTTGAGTAACTA 58.964 36.000 4.20 0.00 41.81 2.24
321 322 6.531240 ACGACAAACGAACTTTGAGTAACTAA 59.469 34.615 4.20 0.00 41.81 2.24
322 323 7.063308 ACGACAAACGAACTTTGAGTAACTAAA 59.937 33.333 4.20 0.00 41.81 1.85
323 324 7.899330 CGACAAACGAACTTTGAGTAACTAAAA 59.101 33.333 4.20 0.00 41.81 1.52
324 325 9.712359 GACAAACGAACTTTGAGTAACTAAAAT 57.288 29.630 4.20 0.00 41.81 1.82
325 326 9.498307 ACAAACGAACTTTGAGTAACTAAAATG 57.502 29.630 4.20 0.00 41.81 2.32
326 327 8.469125 CAAACGAACTTTGAGTAACTAAAATGC 58.531 33.333 0.00 0.00 41.81 3.56
327 328 7.492352 ACGAACTTTGAGTAACTAAAATGCT 57.508 32.000 0.00 0.00 0.00 3.79
328 329 8.597662 ACGAACTTTGAGTAACTAAAATGCTA 57.402 30.769 0.00 0.00 0.00 3.49
329 330 8.709646 ACGAACTTTGAGTAACTAAAATGCTAG 58.290 33.333 0.00 0.00 0.00 3.42
330 331 8.922676 CGAACTTTGAGTAACTAAAATGCTAGA 58.077 33.333 0.00 0.00 0.00 2.43
346 347 7.872113 AATGCTAGATAAGTTTCAAAGGAGG 57.128 36.000 0.00 0.00 0.00 4.30
347 348 6.374417 TGCTAGATAAGTTTCAAAGGAGGT 57.626 37.500 0.00 0.00 0.00 3.85
348 349 6.779860 TGCTAGATAAGTTTCAAAGGAGGTT 58.220 36.000 0.00 0.00 0.00 3.50
349 350 7.913789 TGCTAGATAAGTTTCAAAGGAGGTTA 58.086 34.615 0.00 0.00 0.00 2.85
350 351 8.380099 TGCTAGATAAGTTTCAAAGGAGGTTAA 58.620 33.333 0.00 0.00 0.00 2.01
351 352 8.666573 GCTAGATAAGTTTCAAAGGAGGTTAAC 58.333 37.037 0.00 0.00 0.00 2.01
352 353 9.945904 CTAGATAAGTTTCAAAGGAGGTTAACT 57.054 33.333 5.42 0.00 0.00 2.24
354 355 9.722184 AGATAAGTTTCAAAGGAGGTTAACTAC 57.278 33.333 5.42 0.07 0.00 2.73
355 356 9.722184 GATAAGTTTCAAAGGAGGTTAACTACT 57.278 33.333 5.42 0.00 44.42 2.57
358 359 9.910267 AAGTTTCAAAGGAGGTTAACTACTAAA 57.090 29.630 5.42 0.00 40.43 1.85
359 360 9.557061 AGTTTCAAAGGAGGTTAACTACTAAAG 57.443 33.333 5.42 0.00 40.43 1.85
360 361 8.781196 GTTTCAAAGGAGGTTAACTACTAAAGG 58.219 37.037 5.42 0.00 40.43 3.11
361 362 7.622502 TCAAAGGAGGTTAACTACTAAAGGT 57.377 36.000 5.42 0.00 40.43 3.50
362 363 7.447594 TCAAAGGAGGTTAACTACTAAAGGTG 58.552 38.462 5.42 0.00 40.43 4.00
363 364 7.071572 TCAAAGGAGGTTAACTACTAAAGGTGT 59.928 37.037 5.42 0.00 40.43 4.16
364 365 6.602410 AGGAGGTTAACTACTAAAGGTGTC 57.398 41.667 5.42 0.00 39.14 3.67
365 366 6.321321 AGGAGGTTAACTACTAAAGGTGTCT 58.679 40.000 5.42 0.00 39.14 3.41
366 367 6.786461 AGGAGGTTAACTACTAAAGGTGTCTT 59.214 38.462 5.42 0.00 39.14 3.01
367 368 7.291885 AGGAGGTTAACTACTAAAGGTGTCTTT 59.708 37.037 5.42 0.00 39.14 2.52
368 369 8.588472 GGAGGTTAACTACTAAAGGTGTCTTTA 58.412 37.037 5.42 0.00 42.61 1.85
371 372 9.933723 GGTTAACTACTAAAGGTGTCTTTATCA 57.066 33.333 5.42 0.00 42.52 2.15
376 377 9.877178 ACTACTAAAGGTGTCTTTATCATGAAG 57.123 33.333 0.00 0.00 42.52 3.02
377 378 9.877178 CTACTAAAGGTGTCTTTATCATGAAGT 57.123 33.333 0.00 0.00 42.52 3.01
379 380 9.574516 ACTAAAGGTGTCTTTATCATGAAGTTT 57.425 29.630 0.00 0.00 42.52 2.66
383 384 9.520515 AAGGTGTCTTTATCATGAAGTTTATGT 57.479 29.630 0.00 0.00 0.00 2.29
394 395 9.857656 ATCATGAAGTTTATGTATGTGGATCTT 57.142 29.630 0.00 0.00 0.00 2.40
407 408 9.330063 TGTATGTGGATCTTATGAATTCTGAAC 57.670 33.333 7.05 0.00 0.00 3.18
408 409 7.814264 ATGTGGATCTTATGAATTCTGAACC 57.186 36.000 7.05 8.37 0.00 3.62
409 410 6.962182 TGTGGATCTTATGAATTCTGAACCT 58.038 36.000 7.05 0.00 0.00 3.50
410 411 8.089625 TGTGGATCTTATGAATTCTGAACCTA 57.910 34.615 7.05 0.99 0.00 3.08
411 412 8.717717 TGTGGATCTTATGAATTCTGAACCTAT 58.282 33.333 7.05 0.00 0.00 2.57
412 413 9.566432 GTGGATCTTATGAATTCTGAACCTATT 57.434 33.333 7.05 0.00 0.00 1.73
418 419 9.722056 CTTATGAATTCTGAACCTATTTTTCGG 57.278 33.333 7.05 0.00 0.00 4.30
419 420 7.938140 ATGAATTCTGAACCTATTTTTCGGA 57.062 32.000 7.05 0.00 36.72 4.55
420 421 7.377766 TGAATTCTGAACCTATTTTTCGGAG 57.622 36.000 7.05 0.00 39.11 4.63
421 422 6.374333 TGAATTCTGAACCTATTTTTCGGAGG 59.626 38.462 7.05 0.00 39.11 4.30
422 423 5.492855 TTCTGAACCTATTTTTCGGAGGA 57.507 39.130 0.00 0.00 39.11 3.71
423 424 5.492855 TCTGAACCTATTTTTCGGAGGAA 57.507 39.130 0.00 0.00 34.14 3.36
424 425 5.871834 TCTGAACCTATTTTTCGGAGGAAA 58.128 37.500 0.00 0.00 40.29 3.13
465 466 7.719778 AAAAGGTTCTTGCAAGATCAAATTC 57.280 32.000 28.89 14.52 34.49 2.17
466 467 6.661304 AAGGTTCTTGCAAGATCAAATTCT 57.339 33.333 28.89 16.32 34.49 2.40
467 468 7.765695 AAGGTTCTTGCAAGATCAAATTCTA 57.234 32.000 28.89 8.74 34.49 2.10
468 469 7.150783 AGGTTCTTGCAAGATCAAATTCTAC 57.849 36.000 28.89 19.31 34.49 2.59
469 470 6.944862 AGGTTCTTGCAAGATCAAATTCTACT 59.055 34.615 28.89 14.43 34.49 2.57
470 471 8.103305 AGGTTCTTGCAAGATCAAATTCTACTA 58.897 33.333 28.89 7.24 34.49 1.82
471 472 8.730680 GGTTCTTGCAAGATCAAATTCTACTAA 58.269 33.333 28.89 6.79 34.49 2.24
474 475 9.725019 TCTTGCAAGATCAAATTCTACTAAAGA 57.275 29.630 25.16 0.00 0.00 2.52
477 478 9.896645 TGCAAGATCAAATTCTACTAAAGATCT 57.103 29.630 0.00 0.00 41.60 2.75
483 484 9.950496 ATCAAATTCTACTAAAGATCTGTGTGT 57.050 29.630 0.00 0.00 33.05 3.72
484 485 9.208022 TCAAATTCTACTAAAGATCTGTGTGTG 57.792 33.333 0.00 0.00 33.05 3.82
485 486 7.602517 AATTCTACTAAAGATCTGTGTGTGC 57.397 36.000 0.00 0.00 33.05 4.57
486 487 5.984695 TCTACTAAAGATCTGTGTGTGCT 57.015 39.130 0.00 0.00 0.00 4.40
487 488 5.955488 TCTACTAAAGATCTGTGTGTGCTC 58.045 41.667 0.00 0.00 0.00 4.26
488 489 3.931578 ACTAAAGATCTGTGTGTGCTCC 58.068 45.455 0.00 0.00 0.00 4.70
489 490 2.191128 AAAGATCTGTGTGTGCTCCC 57.809 50.000 0.00 0.00 0.00 4.30
490 491 1.356124 AAGATCTGTGTGTGCTCCCT 58.644 50.000 0.00 0.00 0.00 4.20
491 492 1.356124 AGATCTGTGTGTGCTCCCTT 58.644 50.000 0.00 0.00 0.00 3.95
492 493 1.002888 AGATCTGTGTGTGCTCCCTTG 59.997 52.381 0.00 0.00 0.00 3.61
493 494 0.767375 ATCTGTGTGTGCTCCCTTGT 59.233 50.000 0.00 0.00 0.00 3.16
494 495 0.546122 TCTGTGTGTGCTCCCTTGTT 59.454 50.000 0.00 0.00 0.00 2.83
495 496 0.664761 CTGTGTGTGCTCCCTTGTTG 59.335 55.000 0.00 0.00 0.00 3.33
496 497 0.034574 TGTGTGTGCTCCCTTGTTGT 60.035 50.000 0.00 0.00 0.00 3.32
497 498 1.102978 GTGTGTGCTCCCTTGTTGTT 58.897 50.000 0.00 0.00 0.00 2.83
498 499 1.102154 TGTGTGCTCCCTTGTTGTTG 58.898 50.000 0.00 0.00 0.00 3.33
499 500 0.385390 GTGTGCTCCCTTGTTGTTGG 59.615 55.000 0.00 0.00 0.00 3.77
500 501 1.363807 GTGCTCCCTTGTTGTTGGC 59.636 57.895 0.00 0.00 0.00 4.52
501 502 1.109323 GTGCTCCCTTGTTGTTGGCT 61.109 55.000 0.00 0.00 0.00 4.75
502 503 0.823356 TGCTCCCTTGTTGTTGGCTC 60.823 55.000 0.00 0.00 0.00 4.70
503 504 0.823356 GCTCCCTTGTTGTTGGCTCA 60.823 55.000 0.00 0.00 0.00 4.26
504 505 1.915141 CTCCCTTGTTGTTGGCTCAT 58.085 50.000 0.00 0.00 0.00 2.90
505 506 1.542915 CTCCCTTGTTGTTGGCTCATG 59.457 52.381 0.00 0.00 0.00 3.07
506 507 0.037975 CCCTTGTTGTTGGCTCATGC 60.038 55.000 0.00 0.00 38.76 4.06
517 518 4.147449 CTCATGCCGGCGAGACCA 62.147 66.667 23.90 2.33 39.03 4.02
518 519 4.451150 TCATGCCGGCGAGACCAC 62.451 66.667 23.90 0.00 39.03 4.16
519 520 4.758251 CATGCCGGCGAGACCACA 62.758 66.667 23.90 0.49 39.03 4.17
520 521 3.785859 ATGCCGGCGAGACCACAT 61.786 61.111 23.90 3.48 39.03 3.21
521 522 3.740128 ATGCCGGCGAGACCACATC 62.740 63.158 23.90 0.00 39.03 3.06
523 524 4.873129 CCGGCGAGACCACATCGG 62.873 72.222 9.30 0.00 40.50 4.18
524 525 3.822192 CGGCGAGACCACATCGGA 61.822 66.667 0.00 0.00 40.50 4.55
525 526 2.105128 GGCGAGACCACATCGGAG 59.895 66.667 0.00 0.00 40.50 4.63
526 527 2.583593 GCGAGACCACATCGGAGC 60.584 66.667 0.00 0.00 40.50 4.70
527 528 2.105128 CGAGACCACATCGGAGCC 59.895 66.667 0.00 0.00 38.63 4.70
528 529 2.418910 CGAGACCACATCGGAGCCT 61.419 63.158 0.00 0.00 38.63 4.58
529 530 1.901085 GAGACCACATCGGAGCCTT 59.099 57.895 0.00 0.00 38.63 4.35
530 531 0.179097 GAGACCACATCGGAGCCTTC 60.179 60.000 0.00 0.00 38.63 3.46
531 532 1.519455 GACCACATCGGAGCCTTCG 60.519 63.158 0.00 0.00 38.63 3.79
532 533 2.202932 CCACATCGGAGCCTTCGG 60.203 66.667 0.00 0.00 36.56 4.30
533 534 2.202932 CACATCGGAGCCTTCGGG 60.203 66.667 0.00 0.00 38.37 5.14
534 535 2.683933 ACATCGGAGCCTTCGGGT 60.684 61.111 0.00 0.00 37.45 5.28
535 536 2.202932 CATCGGAGCCTTCGGGTG 60.203 66.667 0.00 0.00 37.45 4.61
536 537 4.162690 ATCGGAGCCTTCGGGTGC 62.163 66.667 0.00 0.00 38.16 5.01
549 550 4.767255 GGTGCTCCGAGTGGGCTG 62.767 72.222 0.00 0.00 33.90 4.85
550 551 4.767255 GTGCTCCGAGTGGGCTGG 62.767 72.222 0.00 0.00 33.90 4.85
552 553 4.459089 GCTCCGAGTGGGCTGGTC 62.459 72.222 0.00 0.00 35.24 4.02
553 554 2.681778 CTCCGAGTGGGCTGGTCT 60.682 66.667 0.00 0.00 35.24 3.85
554 555 2.997315 TCCGAGTGGGCTGGTCTG 60.997 66.667 0.00 0.00 35.24 3.51
555 556 2.997315 CCGAGTGGGCTGGTCTGA 60.997 66.667 0.00 0.00 0.00 3.27
556 557 2.575993 CGAGTGGGCTGGTCTGAG 59.424 66.667 0.00 0.00 0.00 3.35
557 558 2.267324 GAGTGGGCTGGTCTGAGC 59.733 66.667 0.00 0.00 38.34 4.26
563 564 4.154347 GCTGGTCTGAGCCGAGGG 62.154 72.222 4.17 0.00 32.35 4.30
582 583 2.105328 GGCACAAACGGCCGTTTT 59.895 55.556 44.80 33.13 44.84 2.43
583 584 1.519676 GGCACAAACGGCCGTTTTT 60.520 52.632 44.80 38.06 44.84 1.94
584 585 1.484227 GGCACAAACGGCCGTTTTTC 61.484 55.000 44.80 34.17 44.84 2.29
585 586 0.526739 GCACAAACGGCCGTTTTTCT 60.527 50.000 44.80 29.79 44.84 2.52
586 587 1.915952 CACAAACGGCCGTTTTTCTT 58.084 45.000 44.80 28.98 44.84 2.52
587 588 1.849829 CACAAACGGCCGTTTTTCTTC 59.150 47.619 44.80 0.00 44.84 2.87
588 589 1.746787 ACAAACGGCCGTTTTTCTTCT 59.253 42.857 44.80 26.05 44.84 2.85
589 590 2.164827 ACAAACGGCCGTTTTTCTTCTT 59.835 40.909 44.80 25.32 44.84 2.52
590 591 2.768833 AACGGCCGTTTTTCTTCTTC 57.231 45.000 36.96 0.00 34.22 2.87
591 592 1.963172 ACGGCCGTTTTTCTTCTTCT 58.037 45.000 28.70 0.00 0.00 2.85
592 593 1.602377 ACGGCCGTTTTTCTTCTTCTG 59.398 47.619 28.70 0.00 0.00 3.02
593 594 1.069227 CGGCCGTTTTTCTTCTTCTGG 60.069 52.381 19.50 0.00 0.00 3.86
594 595 1.335964 GGCCGTTTTTCTTCTTCTGGC 60.336 52.381 0.00 0.00 40.48 4.85
595 596 1.663161 GCCGTTTTTCTTCTTCTGGCG 60.663 52.381 0.00 0.00 0.00 5.69
596 597 1.663161 CCGTTTTTCTTCTTCTGGCGC 60.663 52.381 0.00 0.00 0.00 6.53
597 598 1.663161 CGTTTTTCTTCTTCTGGCGCC 60.663 52.381 22.73 22.73 0.00 6.53
598 599 0.958822 TTTTTCTTCTTCTGGCGCCC 59.041 50.000 26.77 6.44 0.00 6.13
599 600 0.893727 TTTTCTTCTTCTGGCGCCCC 60.894 55.000 26.77 0.00 0.00 5.80
600 601 3.605749 TTCTTCTTCTGGCGCCCCG 62.606 63.158 26.77 15.72 0.00 5.73
601 602 4.082523 CTTCTTCTGGCGCCCCGA 62.083 66.667 26.77 18.06 0.00 5.14
602 603 3.391665 CTTCTTCTGGCGCCCCGAT 62.392 63.158 26.77 0.00 0.00 4.18
603 604 2.876368 CTTCTTCTGGCGCCCCGATT 62.876 60.000 26.77 0.00 0.00 3.34
604 605 2.438434 CTTCTGGCGCCCCGATTT 60.438 61.111 26.77 0.00 0.00 2.17
605 606 2.034999 TTCTGGCGCCCCGATTTT 59.965 55.556 26.77 0.00 0.00 1.82
606 607 2.270297 CTTCTGGCGCCCCGATTTTG 62.270 60.000 26.77 7.48 0.00 2.44
607 608 3.061848 CTGGCGCCCCGATTTTGT 61.062 61.111 26.77 0.00 0.00 2.83
608 609 2.598985 TGGCGCCCCGATTTTGTT 60.599 55.556 26.77 0.00 0.00 2.83
609 610 2.180769 GGCGCCCCGATTTTGTTC 59.819 61.111 18.11 0.00 0.00 3.18
610 611 2.340328 GGCGCCCCGATTTTGTTCT 61.340 57.895 18.11 0.00 0.00 3.01
611 612 1.584495 GCGCCCCGATTTTGTTCTT 59.416 52.632 0.00 0.00 0.00 2.52
612 613 0.038618 GCGCCCCGATTTTGTTCTTT 60.039 50.000 0.00 0.00 0.00 2.52
613 614 1.977188 CGCCCCGATTTTGTTCTTTC 58.023 50.000 0.00 0.00 0.00 2.62
614 615 1.727857 CGCCCCGATTTTGTTCTTTCG 60.728 52.381 0.00 0.00 0.00 3.46
615 616 1.538075 GCCCCGATTTTGTTCTTTCGA 59.462 47.619 0.00 0.00 33.59 3.71
616 617 2.163613 GCCCCGATTTTGTTCTTTCGAT 59.836 45.455 0.00 0.00 33.59 3.59
617 618 3.758300 CCCCGATTTTGTTCTTTCGATG 58.242 45.455 0.00 0.00 33.59 3.84
618 619 3.427503 CCCCGATTTTGTTCTTTCGATGG 60.428 47.826 0.00 0.00 33.59 3.51
619 620 3.438781 CCCGATTTTGTTCTTTCGATGGA 59.561 43.478 0.00 0.00 33.59 3.41
620 621 4.096382 CCCGATTTTGTTCTTTCGATGGAT 59.904 41.667 0.00 0.00 33.59 3.41
621 622 5.393027 CCCGATTTTGTTCTTTCGATGGATT 60.393 40.000 0.00 0.00 33.59 3.01
622 623 6.092748 CCGATTTTGTTCTTTCGATGGATTT 58.907 36.000 0.00 0.00 33.59 2.17
623 624 6.586082 CCGATTTTGTTCTTTCGATGGATTTT 59.414 34.615 0.00 0.00 33.59 1.82
624 625 7.116233 CCGATTTTGTTCTTTCGATGGATTTTT 59.884 33.333 0.00 0.00 33.59 1.94
625 626 8.155923 CGATTTTGTTCTTTCGATGGATTTTTC 58.844 33.333 0.00 0.00 33.59 2.29
626 627 9.196552 GATTTTGTTCTTTCGATGGATTTTTCT 57.803 29.630 0.00 0.00 0.00 2.52
627 628 8.574196 TTTTGTTCTTTCGATGGATTTTTCTC 57.426 30.769 0.00 0.00 0.00 2.87
628 629 5.927030 TGTTCTTTCGATGGATTTTTCTCG 58.073 37.500 0.00 0.00 0.00 4.04
629 630 4.600012 TCTTTCGATGGATTTTTCTCGC 57.400 40.909 0.00 0.00 0.00 5.03
630 631 4.000325 TCTTTCGATGGATTTTTCTCGCA 59.000 39.130 0.00 0.00 0.00 5.10
631 632 4.635765 TCTTTCGATGGATTTTTCTCGCAT 59.364 37.500 0.00 0.00 0.00 4.73
632 633 4.963276 TTCGATGGATTTTTCTCGCATT 57.037 36.364 0.00 0.00 0.00 3.56
633 634 4.963276 TCGATGGATTTTTCTCGCATTT 57.037 36.364 0.00 0.00 0.00 2.32
634 635 4.908736 TCGATGGATTTTTCTCGCATTTC 58.091 39.130 0.00 0.00 0.00 2.17
635 636 4.635765 TCGATGGATTTTTCTCGCATTTCT 59.364 37.500 0.00 0.00 0.00 2.52
636 637 5.123820 TCGATGGATTTTTCTCGCATTTCTT 59.876 36.000 0.00 0.00 0.00 2.52
637 638 6.315144 TCGATGGATTTTTCTCGCATTTCTTA 59.685 34.615 0.00 0.00 0.00 2.10
638 639 7.012327 TCGATGGATTTTTCTCGCATTTCTTAT 59.988 33.333 0.00 0.00 0.00 1.73
639 640 7.112565 CGATGGATTTTTCTCGCATTTCTTATG 59.887 37.037 0.00 0.00 0.00 1.90
640 641 6.035843 TGGATTTTTCTCGCATTTCTTATGC 58.964 36.000 0.00 0.00 41.35 3.14
641 642 6.035843 GGATTTTTCTCGCATTTCTTATGCA 58.964 36.000 10.03 0.00 44.75 3.96
642 643 6.020360 GGATTTTTCTCGCATTTCTTATGCAC 60.020 38.462 10.03 0.00 44.75 4.57
643 644 4.355543 TTTCTCGCATTTCTTATGCACC 57.644 40.909 10.03 0.00 44.75 5.01
644 645 1.933181 TCTCGCATTTCTTATGCACCG 59.067 47.619 10.03 0.00 44.75 4.94
645 646 1.003545 CTCGCATTTCTTATGCACCGG 60.004 52.381 0.00 0.00 44.75 5.28
646 647 1.013596 CGCATTTCTTATGCACCGGA 58.986 50.000 9.46 0.00 44.75 5.14
647 648 1.603802 CGCATTTCTTATGCACCGGAT 59.396 47.619 9.46 0.00 44.75 4.18
648 649 2.602933 CGCATTTCTTATGCACCGGATG 60.603 50.000 9.46 3.68 44.75 3.51
649 650 2.618241 GCATTTCTTATGCACCGGATGA 59.382 45.455 9.46 0.00 44.00 2.92
650 651 3.304257 GCATTTCTTATGCACCGGATGAG 60.304 47.826 9.46 0.00 44.00 2.90
651 652 2.620251 TTCTTATGCACCGGATGAGG 57.380 50.000 9.46 0.00 37.30 3.86
652 653 0.758734 TCTTATGCACCGGATGAGGG 59.241 55.000 9.46 0.00 35.02 4.30
653 654 0.886490 CTTATGCACCGGATGAGGGC 60.886 60.000 9.46 1.99 35.02 5.19
654 655 1.344953 TTATGCACCGGATGAGGGCT 61.345 55.000 9.46 0.00 35.02 5.19
655 656 2.043604 TATGCACCGGATGAGGGCTG 62.044 60.000 9.46 0.00 35.02 4.85
656 657 4.864334 GCACCGGATGAGGGCTGG 62.864 72.222 9.46 0.00 37.80 4.85
657 658 4.181010 CACCGGATGAGGGCTGGG 62.181 72.222 9.46 0.00 36.06 4.45
660 661 4.559063 CGGATGAGGGCTGGGCTG 62.559 72.222 0.00 0.00 0.00 4.85
661 662 4.201122 GGATGAGGGCTGGGCTGG 62.201 72.222 0.00 0.00 0.00 4.85
662 663 4.891037 GATGAGGGCTGGGCTGGC 62.891 72.222 0.00 0.00 0.00 4.85
665 666 3.411517 GAGGGCTGGGCTGGCTTA 61.412 66.667 0.00 0.00 0.00 3.09
674 675 0.110678 GGGCTGGCTTATTACCCTCC 59.889 60.000 0.00 0.00 37.59 4.30
704 705 3.736740 GCCTCTTTCTCGTTTTTGCCAAA 60.737 43.478 0.00 0.00 0.00 3.28
705 706 4.044426 CCTCTTTCTCGTTTTTGCCAAAG 58.956 43.478 0.00 0.00 0.00 2.77
706 707 4.040445 TCTTTCTCGTTTTTGCCAAAGG 57.960 40.909 0.00 0.00 0.00 3.11
707 708 2.880963 TTCTCGTTTTTGCCAAAGGG 57.119 45.000 0.00 0.00 37.18 3.95
742 743 0.450983 ACTACTGGAGACGCGCTAAC 59.549 55.000 5.73 2.00 0.00 2.34
766 776 2.268298 CCTAGACCGTGTTTTGGATCG 58.732 52.381 0.00 0.00 0.00 3.69
768 778 3.119388 CCTAGACCGTGTTTTGGATCGTA 60.119 47.826 0.00 0.00 0.00 3.43
769 779 2.680577 AGACCGTGTTTTGGATCGTAC 58.319 47.619 0.00 0.00 0.00 3.67
791 801 0.109272 CTCGCAGTGTACACGGACAT 60.109 55.000 27.27 4.59 36.20 3.06
846 893 2.655364 CACGCGCTACAGATCCCG 60.655 66.667 5.73 0.00 0.00 5.14
858 906 2.621526 ACAGATCCCGCGTTTTCTTTTT 59.378 40.909 4.92 0.00 0.00 1.94
905 959 4.054671 GGAGAGTCAAGTCAAGTCAACTG 58.945 47.826 0.00 0.00 0.00 3.16
917 971 5.350914 GTCAAGTCAACTGAATCCAGATCTG 59.649 44.000 16.24 16.24 43.02 2.90
957 1040 0.811616 CCTTCGGCTAGCAGCGAAAT 60.812 55.000 23.09 0.00 43.62 2.17
978 1071 4.290711 TCATTCATCTCACAAGCCTCAA 57.709 40.909 0.00 0.00 0.00 3.02
992 1087 1.508088 CTCAACCCCATTTCGCTGC 59.492 57.895 0.00 0.00 0.00 5.25
1051 1146 1.905215 CCATCTTCTCCAGGTCAGTGT 59.095 52.381 0.00 0.00 0.00 3.55
1229 1404 1.773054 GCAGCAGCTCACATCCATCG 61.773 60.000 0.00 0.00 37.91 3.84
1270 1461 1.517832 CCACTTACGCTGGAGGAGG 59.482 63.158 0.00 0.00 0.00 4.30
1403 1594 2.608506 GGGTGCATTTGGAACGGTTTAC 60.609 50.000 0.00 0.00 0.00 2.01
1438 1629 3.870419 TGCCTTGACAACTTTTTGCATTC 59.130 39.130 0.00 0.00 36.00 2.67
1660 1853 3.571401 ACTGCCATGAAGGACAAAAGAAG 59.429 43.478 0.00 0.00 41.22 2.85
1803 2004 9.702253 TTCTATTTTAGTCTCATCTACTCCAGT 57.298 33.333 0.00 0.00 0.00 4.00
1806 2007 8.824756 ATTTTAGTCTCATCTACTCCAGTACA 57.175 34.615 0.00 0.00 0.00 2.90
1870 2074 6.581712 AGTTGTTTTACAATGTTTGGAGCAT 58.418 32.000 0.00 0.00 40.59 3.79
2312 2523 3.668447 GGTGAAATCTCAGCTCAGTCAA 58.332 45.455 0.00 0.00 44.97 3.18
2380 2591 5.648092 CGAGAAGAATAACCCCAAACAGAAT 59.352 40.000 0.00 0.00 0.00 2.40
2569 2782 3.589988 AGCGTCCAGATACTCAAAGTTG 58.410 45.455 0.00 0.00 0.00 3.16
2596 2809 3.372440 AATGGCCTCCAGGAAGTAAAG 57.628 47.619 3.32 0.00 36.75 1.85
2659 2872 1.110442 AGAGCAGACCCTCAATCGAG 58.890 55.000 0.00 0.00 39.16 4.04
2670 2883 2.283617 CCTCAATCGAGAGCATTGTTCG 59.716 50.000 0.00 0.00 42.34 3.95
2686 2899 3.518998 CGGAGGCTCGATGGACGT 61.519 66.667 8.69 0.00 43.13 4.34
2778 3002 4.923893 TCACTTTGTTTCATGCAAGTGAG 58.076 39.130 9.05 1.97 33.52 3.51
2779 3003 4.639755 TCACTTTGTTTCATGCAAGTGAGA 59.360 37.500 9.05 0.00 33.52 3.27
2780 3004 4.974275 CACTTTGTTTCATGCAAGTGAGAG 59.026 41.667 5.19 0.00 32.28 3.20
2791 3016 3.013219 GCAAGTGAGAGGAGGAATTTCC 58.987 50.000 7.39 7.39 37.52 3.13
2797 3029 5.252630 AGTGAGAGGAGGAATTTCCAATCTT 59.747 40.000 17.57 3.80 39.61 2.40
2994 3327 2.118679 TGGATGTGATCGAGGTGGATT 58.881 47.619 0.00 0.00 0.00 3.01
3016 3349 9.106070 GGATTGTAATAATCCGTTTGTCTAACT 57.894 33.333 3.18 0.00 37.11 2.24
3046 3379 7.967854 GCCTACCAATTTTATTCAATTTTTGCC 59.032 33.333 0.00 0.00 0.00 4.52
3063 3396 1.202592 TGCCGCTAGTTTCTCACAACA 60.203 47.619 0.00 0.00 0.00 3.33
3064 3397 1.461127 GCCGCTAGTTTCTCACAACAG 59.539 52.381 0.00 0.00 0.00 3.16
3065 3398 2.866460 GCCGCTAGTTTCTCACAACAGA 60.866 50.000 0.00 0.00 0.00 3.41
3066 3399 3.589988 CCGCTAGTTTCTCACAACAGAT 58.410 45.455 0.00 0.00 0.00 2.90
3067 3400 3.997021 CCGCTAGTTTCTCACAACAGATT 59.003 43.478 0.00 0.00 0.00 2.40
3068 3401 4.452455 CCGCTAGTTTCTCACAACAGATTT 59.548 41.667 0.00 0.00 0.00 2.17
3069 3402 5.049405 CCGCTAGTTTCTCACAACAGATTTT 60.049 40.000 0.00 0.00 0.00 1.82
3070 3403 6.430451 CGCTAGTTTCTCACAACAGATTTTT 58.570 36.000 0.00 0.00 0.00 1.94
3091 3424 3.444792 TTTAAAAGTAGGCTGACCCCC 57.555 47.619 0.00 0.00 36.11 5.40
3092 3425 0.906775 TAAAAGTAGGCTGACCCCCG 59.093 55.000 0.00 0.00 36.11 5.73
3093 3426 1.848886 AAAAGTAGGCTGACCCCCGG 61.849 60.000 0.00 0.00 36.11 5.73
3102 3435 4.759205 GACCCCCGGCCTTTGCAT 62.759 66.667 0.00 0.00 40.13 3.96
3103 3436 4.759205 ACCCCCGGCCTTTGCATC 62.759 66.667 0.00 0.00 40.13 3.91
3104 3437 4.757355 CCCCCGGCCTTTGCATCA 62.757 66.667 0.00 0.00 40.13 3.07
3105 3438 2.679642 CCCCGGCCTTTGCATCAA 60.680 61.111 0.00 0.00 40.13 2.57
3106 3439 2.059786 CCCCGGCCTTTGCATCAAT 61.060 57.895 0.00 0.00 40.13 2.57
3107 3440 1.438814 CCCGGCCTTTGCATCAATC 59.561 57.895 0.00 0.00 40.13 2.67
3108 3441 1.064621 CCGGCCTTTGCATCAATCG 59.935 57.895 0.00 0.00 40.13 3.34
3109 3442 1.375853 CCGGCCTTTGCATCAATCGA 61.376 55.000 0.00 0.00 40.13 3.59
3110 3443 0.664761 CGGCCTTTGCATCAATCGAT 59.335 50.000 0.00 0.00 40.13 3.59
3120 3453 2.390938 CATCAATCGATGCATGCAACC 58.609 47.619 26.68 18.06 42.54 3.77
3121 3454 1.461559 TCAATCGATGCATGCAACCA 58.538 45.000 26.68 11.67 0.00 3.67
3122 3455 2.025898 TCAATCGATGCATGCAACCAT 58.974 42.857 26.68 13.76 0.00 3.55
3123 3456 3.212685 TCAATCGATGCATGCAACCATA 58.787 40.909 26.68 9.53 0.00 2.74
3124 3457 3.822167 TCAATCGATGCATGCAACCATAT 59.178 39.130 26.68 6.72 0.00 1.78
3125 3458 4.278919 TCAATCGATGCATGCAACCATATT 59.721 37.500 26.68 16.43 0.00 1.28
3126 3459 5.472820 TCAATCGATGCATGCAACCATATTA 59.527 36.000 26.68 4.42 0.00 0.98
3127 3460 6.151480 TCAATCGATGCATGCAACCATATTAT 59.849 34.615 26.68 4.06 0.00 1.28
3128 3461 5.963176 TCGATGCATGCAACCATATTATT 57.037 34.783 26.68 3.17 0.00 1.40
3129 3462 7.628769 ATCGATGCATGCAACCATATTATTA 57.371 32.000 26.68 0.00 0.00 0.98
3130 3463 7.446001 TCGATGCATGCAACCATATTATTAA 57.554 32.000 26.68 0.00 0.00 1.40
3131 3464 7.880105 TCGATGCATGCAACCATATTATTAAA 58.120 30.769 26.68 0.00 0.00 1.52
3132 3465 8.522003 TCGATGCATGCAACCATATTATTAAAT 58.478 29.630 26.68 1.01 0.00 1.40
3133 3466 9.786105 CGATGCATGCAACCATATTATTAAATA 57.214 29.630 26.68 0.00 32.20 1.40
3156 3489 9.551734 AATAAGAACGTAACAAAGTCTTAAGGT 57.448 29.630 1.85 0.00 0.00 3.50
3157 3490 7.474398 AAGAACGTAACAAAGTCTTAAGGTC 57.526 36.000 1.85 0.00 0.00 3.85
3158 3491 5.987953 AGAACGTAACAAAGTCTTAAGGTCC 59.012 40.000 1.85 0.00 0.00 4.46
3159 3492 5.280654 ACGTAACAAAGTCTTAAGGTCCA 57.719 39.130 1.85 0.00 0.00 4.02
3160 3493 5.673514 ACGTAACAAAGTCTTAAGGTCCAA 58.326 37.500 1.85 0.00 0.00 3.53
3161 3494 6.114767 ACGTAACAAAGTCTTAAGGTCCAAA 58.885 36.000 1.85 0.00 0.00 3.28
3162 3495 6.598850 ACGTAACAAAGTCTTAAGGTCCAAAA 59.401 34.615 1.85 0.00 0.00 2.44
3163 3496 7.121020 ACGTAACAAAGTCTTAAGGTCCAAAAA 59.879 33.333 1.85 0.00 0.00 1.94
3182 3515 4.342862 AAAAGCTCTGAGCAGTAGTTGA 57.657 40.909 29.49 0.00 45.56 3.18
3183 3516 4.342862 AAAGCTCTGAGCAGTAGTTGAA 57.657 40.909 29.49 0.00 45.56 2.69
3184 3517 4.342862 AAGCTCTGAGCAGTAGTTGAAA 57.657 40.909 29.49 0.00 45.56 2.69
3185 3518 3.924144 AGCTCTGAGCAGTAGTTGAAAG 58.076 45.455 29.49 0.00 45.56 2.62
3186 3519 3.576118 AGCTCTGAGCAGTAGTTGAAAGA 59.424 43.478 29.49 0.00 45.56 2.52
3187 3520 4.039730 AGCTCTGAGCAGTAGTTGAAAGAA 59.960 41.667 29.49 0.00 45.56 2.52
3188 3521 4.752101 GCTCTGAGCAGTAGTTGAAAGAAA 59.248 41.667 24.02 0.00 41.89 2.52
3189 3522 5.237344 GCTCTGAGCAGTAGTTGAAAGAAAA 59.763 40.000 24.02 0.00 41.89 2.29
3190 3523 6.072783 GCTCTGAGCAGTAGTTGAAAGAAAAT 60.073 38.462 24.02 0.00 41.89 1.82
3191 3524 7.118390 GCTCTGAGCAGTAGTTGAAAGAAAATA 59.882 37.037 24.02 0.00 41.89 1.40
3192 3525 8.902540 TCTGAGCAGTAGTTGAAAGAAAATAA 57.097 30.769 0.00 0.00 0.00 1.40
3193 3526 8.993121 TCTGAGCAGTAGTTGAAAGAAAATAAG 58.007 33.333 0.00 0.00 0.00 1.73
3194 3527 8.677148 TGAGCAGTAGTTGAAAGAAAATAAGT 57.323 30.769 0.00 0.00 0.00 2.24
3195 3528 8.774586 TGAGCAGTAGTTGAAAGAAAATAAGTC 58.225 33.333 0.00 0.00 0.00 3.01
3196 3529 8.910351 AGCAGTAGTTGAAAGAAAATAAGTCT 57.090 30.769 0.00 0.00 0.00 3.24
3197 3530 8.778358 AGCAGTAGTTGAAAGAAAATAAGTCTG 58.222 33.333 0.00 0.00 0.00 3.51
3198 3531 8.774586 GCAGTAGTTGAAAGAAAATAAGTCTGA 58.225 33.333 0.00 0.00 0.00 3.27
3240 3573 9.180678 GTAAAATACATTCACCACAAGACAAAG 57.819 33.333 0.00 0.00 0.00 2.77
3363 3696 8.385858 GCATAAGGCTTTCAAAAGAATTGATTC 58.614 33.333 4.45 0.00 38.28 2.52
3558 4221 6.726258 ACAAAATTGCTTTTAGCTTATGCC 57.274 33.333 0.00 0.00 42.97 4.40
3559 4222 6.229733 ACAAAATTGCTTTTAGCTTATGCCA 58.770 32.000 0.00 0.00 42.97 4.92
3596 4259 8.818057 GGTGTTGCTAACATATACTCTACAAAG 58.182 37.037 5.26 0.00 44.35 2.77
3644 4309 4.450419 CGAGCATAAACTGGGATCTTCATC 59.550 45.833 0.00 0.00 0.00 2.92
3665 4330 1.880027 GACGAAAGAAGGGCAACATGT 59.120 47.619 0.00 0.00 39.74 3.21
3679 4346 5.157067 GGCAACATGTAAAGAAAGAGCTTC 58.843 41.667 0.00 0.00 0.00 3.86
3755 4431 8.185505 TCGTGGAACTTGTTAATTTATTATGGC 58.814 33.333 0.00 0.00 31.75 4.40
3823 4500 2.230992 TGCAGTGTTGTTGCTTCTGTTT 59.769 40.909 0.00 0.00 42.02 2.83
3892 4582 3.389656 TGTCTCTGTTCATTGTACCACCA 59.610 43.478 0.00 0.00 0.00 4.17
3914 4604 2.490961 TCCCTCATCATTGGTCCATCA 58.509 47.619 0.00 0.00 0.00 3.07
3956 4646 0.037790 GCTCATCATAGACGGGCTCC 60.038 60.000 0.00 0.00 0.00 4.70
4002 4692 5.763355 TCTAAGAGCTAACCTAGGCAGTTA 58.237 41.667 9.30 0.00 0.00 2.24
4029 4719 1.544691 GACAAGGCTAGTCTTGACCGA 59.455 52.381 37.10 0.00 44.98 4.69
4036 4726 2.480416 GCTAGTCTTGACCGATCAGTGG 60.480 54.545 0.00 0.00 35.83 4.00
4041 4731 3.056749 GTCTTGACCGATCAGTGGTAAGT 60.057 47.826 0.00 0.00 40.63 2.24
4113 4803 9.862149 TTATAGGTGTCTAGTCAGTGATATTGA 57.138 33.333 0.00 0.00 0.00 2.57
4143 4833 3.709653 CTGACCACCCTATTTAGTAGCCA 59.290 47.826 0.00 0.00 0.00 4.75
4226 5101 0.994247 ACCATCAGATCCCTGCACAA 59.006 50.000 0.00 0.00 40.20 3.33
4235 5110 1.672356 CCCTGCACAAGGTTCCTCG 60.672 63.158 0.00 0.00 45.78 4.63
4239 5114 1.070786 GCACAAGGTTCCTCGTGGA 59.929 57.895 11.24 1.10 41.36 4.02
4262 5137 1.274728 GGAGCGCACATAGAGGATCAT 59.725 52.381 11.47 0.00 37.82 2.45
4263 5138 2.335752 GAGCGCACATAGAGGATCATG 58.664 52.381 11.47 0.00 37.82 3.07
4268 5143 2.551459 GCACATAGAGGATCATGTTGGC 59.449 50.000 0.00 0.00 35.63 4.52
4274 5156 2.435805 AGAGGATCATGTTGGCGTACAT 59.564 45.455 0.00 0.00 39.27 2.29
4385 6648 3.758554 AGGTGTACATGTTTTGGATCTGC 59.241 43.478 2.30 0.00 0.00 4.26
4457 6731 3.493334 GGTAGGGTTACTTGGCTTGTTT 58.507 45.455 0.00 0.00 0.00 2.83
4460 6734 2.091555 AGGGTTACTTGGCTTGTTTCCA 60.092 45.455 0.00 0.00 0.00 3.53
4468 6742 6.043854 ACTTGGCTTGTTTCCAAAGTTTTA 57.956 33.333 0.00 0.00 42.45 1.52
4471 6745 7.709182 ACTTGGCTTGTTTCCAAAGTTTTATAC 59.291 33.333 0.00 0.00 42.45 1.47
4499 6773 6.334989 TCATGTCTTACGGTACAAGTAATGG 58.665 40.000 11.81 4.42 34.10 3.16
4531 6805 1.229400 AGGAGGCCCACCGTTAGAA 60.229 57.895 0.00 0.00 42.76 2.10
4539 6813 1.443872 CACCGTTAGAAGCGAGCGT 60.444 57.895 0.00 0.00 0.00 5.07
4555 6829 0.455464 GCGTCCCAAACAATAACCGC 60.455 55.000 0.00 0.00 0.00 5.68
4617 6891 2.357777 GGTACCCCTGGTGTATTGCAAT 60.358 50.000 17.56 17.56 36.19 3.56
4681 6956 1.073125 TCGAAAATGAGAACCCAGGCA 59.927 47.619 0.00 0.00 0.00 4.75
4726 7001 1.089920 GCGGTCTGTCTGCATGAATT 58.910 50.000 0.00 0.00 46.78 2.17
4727 7002 1.470098 GCGGTCTGTCTGCATGAATTT 59.530 47.619 0.00 0.00 46.78 1.82
4760 7035 2.245582 ACTTAGGTTCGCTAGGTGTGT 58.754 47.619 0.00 0.00 0.00 3.72
4762 7037 1.913778 TAGGTTCGCTAGGTGTGTGA 58.086 50.000 0.00 0.00 0.00 3.58
4800 7075 3.806380 AGTGTACTGATCCGTCGATAGT 58.194 45.455 0.00 0.00 37.40 2.12
4815 7090 3.133901 TCGATAGTTTGGCTGCATTAGGA 59.866 43.478 0.50 0.00 37.40 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.000938 GCAGCAACCTCTTCCTTGTTG 60.001 52.381 0.00 0.00 41.69 3.33
3 4 1.133668 AGCAGCAACCTCTTCCTTGTT 60.134 47.619 0.00 0.00 0.00 2.83
4 5 0.475906 AGCAGCAACCTCTTCCTTGT 59.524 50.000 0.00 0.00 0.00 3.16
6 7 1.613836 CAAGCAGCAACCTCTTCCTT 58.386 50.000 0.00 0.00 0.00 3.36
8 9 0.250901 TCCAAGCAGCAACCTCTTCC 60.251 55.000 0.00 0.00 0.00 3.46
9 10 1.163554 CTCCAAGCAGCAACCTCTTC 58.836 55.000 0.00 0.00 0.00 2.87
10 11 0.892814 GCTCCAAGCAGCAACCTCTT 60.893 55.000 0.00 0.00 41.89 2.85
11 12 1.303155 GCTCCAAGCAGCAACCTCT 60.303 57.895 0.00 0.00 41.89 3.69
12 13 1.303155 AGCTCCAAGCAGCAACCTC 60.303 57.895 1.29 0.00 45.56 3.85
13 14 1.303155 GAGCTCCAAGCAGCAACCT 60.303 57.895 0.87 0.00 45.56 3.50
14 15 1.601759 TGAGCTCCAAGCAGCAACC 60.602 57.895 12.15 0.00 45.56 3.77
15 16 1.578423 GTGAGCTCCAAGCAGCAAC 59.422 57.895 12.15 0.00 45.56 4.17
16 17 1.601759 GGTGAGCTCCAAGCAGCAA 60.602 57.895 12.15 0.00 45.56 3.91
17 18 2.033141 GGTGAGCTCCAAGCAGCA 59.967 61.111 12.15 0.00 45.56 4.41
18 19 1.174712 TTTGGTGAGCTCCAAGCAGC 61.175 55.000 12.15 2.70 46.27 5.25
19 20 0.879765 CTTTGGTGAGCTCCAAGCAG 59.120 55.000 12.15 1.51 46.27 4.24
20 21 0.473755 TCTTTGGTGAGCTCCAAGCA 59.526 50.000 12.15 6.55 46.27 3.91
21 22 1.538950 CTTCTTTGGTGAGCTCCAAGC 59.461 52.381 12.15 3.58 46.27 4.01
22 23 3.131709 TCTTCTTTGGTGAGCTCCAAG 57.868 47.619 12.15 8.33 46.27 3.61
23 24 3.576078 TTCTTCTTTGGTGAGCTCCAA 57.424 42.857 12.15 7.06 44.48 3.53
24 25 3.214328 GTTTCTTCTTTGGTGAGCTCCA 58.786 45.455 12.15 0.00 35.49 3.86
25 26 2.554462 GGTTTCTTCTTTGGTGAGCTCC 59.446 50.000 12.15 2.19 0.00 4.70
26 27 3.214328 TGGTTTCTTCTTTGGTGAGCTC 58.786 45.455 6.82 6.82 0.00 4.09
27 28 3.297134 TGGTTTCTTCTTTGGTGAGCT 57.703 42.857 0.00 0.00 0.00 4.09
28 29 4.112634 GTTTGGTTTCTTCTTTGGTGAGC 58.887 43.478 0.00 0.00 0.00 4.26
29 30 4.402474 AGGTTTGGTTTCTTCTTTGGTGAG 59.598 41.667 0.00 0.00 0.00 3.51
30 31 4.159506 CAGGTTTGGTTTCTTCTTTGGTGA 59.840 41.667 0.00 0.00 0.00 4.02
31 32 4.159506 TCAGGTTTGGTTTCTTCTTTGGTG 59.840 41.667 0.00 0.00 0.00 4.17
32 33 4.349365 TCAGGTTTGGTTTCTTCTTTGGT 58.651 39.130 0.00 0.00 0.00 3.67
33 34 5.337578 TTCAGGTTTGGTTTCTTCTTTGG 57.662 39.130 0.00 0.00 0.00 3.28
34 35 5.291858 GCTTTCAGGTTTGGTTTCTTCTTTG 59.708 40.000 0.00 0.00 0.00 2.77
35 36 5.419542 GCTTTCAGGTTTGGTTTCTTCTTT 58.580 37.500 0.00 0.00 0.00 2.52
36 37 4.141937 GGCTTTCAGGTTTGGTTTCTTCTT 60.142 41.667 0.00 0.00 0.00 2.52
37 38 3.384789 GGCTTTCAGGTTTGGTTTCTTCT 59.615 43.478 0.00 0.00 0.00 2.85
38 39 3.132111 TGGCTTTCAGGTTTGGTTTCTTC 59.868 43.478 0.00 0.00 0.00 2.87
39 40 3.103742 TGGCTTTCAGGTTTGGTTTCTT 58.896 40.909 0.00 0.00 0.00 2.52
40 41 2.695147 CTGGCTTTCAGGTTTGGTTTCT 59.305 45.455 0.00 0.00 39.76 2.52
41 42 2.803133 GCTGGCTTTCAGGTTTGGTTTC 60.803 50.000 0.00 0.00 43.54 2.78
42 43 1.138859 GCTGGCTTTCAGGTTTGGTTT 59.861 47.619 0.00 0.00 43.54 3.27
43 44 0.752658 GCTGGCTTTCAGGTTTGGTT 59.247 50.000 0.00 0.00 43.54 3.67
44 45 1.455383 CGCTGGCTTTCAGGTTTGGT 61.455 55.000 0.00 0.00 43.54 3.67
45 46 1.286880 CGCTGGCTTTCAGGTTTGG 59.713 57.895 0.00 0.00 43.54 3.28
46 47 1.197721 CTACGCTGGCTTTCAGGTTTG 59.802 52.381 0.00 0.00 43.54 2.93
47 48 1.523758 CTACGCTGGCTTTCAGGTTT 58.476 50.000 0.00 0.00 43.54 3.27
48 49 0.955919 GCTACGCTGGCTTTCAGGTT 60.956 55.000 0.00 0.00 43.54 3.50
49 50 1.376037 GCTACGCTGGCTTTCAGGT 60.376 57.895 0.00 0.00 43.54 4.00
50 51 0.674895 AAGCTACGCTGGCTTTCAGG 60.675 55.000 4.62 0.00 46.24 3.86
51 52 0.445436 CAAGCTACGCTGGCTTTCAG 59.555 55.000 7.26 0.00 46.24 3.02
52 53 0.955428 CCAAGCTACGCTGGCTTTCA 60.955 55.000 7.26 0.00 46.24 2.69
53 54 1.648467 CCCAAGCTACGCTGGCTTTC 61.648 60.000 7.26 0.00 46.24 2.62
54 55 1.675641 CCCAAGCTACGCTGGCTTT 60.676 57.895 7.26 0.00 46.24 3.51
56 57 3.322466 ACCCAAGCTACGCTGGCT 61.322 61.111 0.00 0.00 39.62 4.75
57 58 3.127533 CACCCAAGCTACGCTGGC 61.128 66.667 0.00 0.00 39.62 4.85
58 59 2.436646 CCACCCAAGCTACGCTGG 60.437 66.667 0.00 0.00 39.62 4.85
59 60 1.448540 CTCCACCCAAGCTACGCTG 60.449 63.158 0.00 0.00 39.62 5.18
60 61 1.192146 TTCTCCACCCAAGCTACGCT 61.192 55.000 0.00 0.00 42.56 5.07
61 62 0.741221 CTTCTCCACCCAAGCTACGC 60.741 60.000 0.00 0.00 0.00 4.42
62 63 0.895530 TCTTCTCCACCCAAGCTACG 59.104 55.000 0.00 0.00 0.00 3.51
63 64 3.418684 TTTCTTCTCCACCCAAGCTAC 57.581 47.619 0.00 0.00 0.00 3.58
64 65 3.587061 TGATTTCTTCTCCACCCAAGCTA 59.413 43.478 0.00 0.00 0.00 3.32
65 66 2.376518 TGATTTCTTCTCCACCCAAGCT 59.623 45.455 0.00 0.00 0.00 3.74
66 67 2.795329 TGATTTCTTCTCCACCCAAGC 58.205 47.619 0.00 0.00 0.00 4.01
67 68 4.768968 ACAATGATTTCTTCTCCACCCAAG 59.231 41.667 0.00 0.00 0.00 3.61
68 69 4.739793 ACAATGATTTCTTCTCCACCCAA 58.260 39.130 0.00 0.00 0.00 4.12
69 70 4.387026 ACAATGATTTCTTCTCCACCCA 57.613 40.909 0.00 0.00 0.00 4.51
70 71 4.082026 CCAACAATGATTTCTTCTCCACCC 60.082 45.833 0.00 0.00 0.00 4.61
71 72 4.619160 GCCAACAATGATTTCTTCTCCACC 60.619 45.833 0.00 0.00 0.00 4.61
72 73 4.022068 TGCCAACAATGATTTCTTCTCCAC 60.022 41.667 0.00 0.00 0.00 4.02
73 74 4.022068 GTGCCAACAATGATTTCTTCTCCA 60.022 41.667 0.00 0.00 0.00 3.86
74 75 4.488879 GTGCCAACAATGATTTCTTCTCC 58.511 43.478 0.00 0.00 0.00 3.71
75 76 4.161333 CGTGCCAACAATGATTTCTTCTC 58.839 43.478 0.00 0.00 0.00 2.87
76 77 3.612479 GCGTGCCAACAATGATTTCTTCT 60.612 43.478 0.00 0.00 0.00 2.85
77 78 2.663119 GCGTGCCAACAATGATTTCTTC 59.337 45.455 0.00 0.00 0.00 2.87
78 79 2.035704 TGCGTGCCAACAATGATTTCTT 59.964 40.909 0.00 0.00 0.00 2.52
79 80 1.612950 TGCGTGCCAACAATGATTTCT 59.387 42.857 0.00 0.00 0.00 2.52
80 81 1.987770 CTGCGTGCCAACAATGATTTC 59.012 47.619 0.00 0.00 0.00 2.17
81 82 1.936203 GCTGCGTGCCAACAATGATTT 60.936 47.619 0.00 0.00 35.15 2.17
82 83 0.388907 GCTGCGTGCCAACAATGATT 60.389 50.000 0.00 0.00 35.15 2.57
83 84 1.213537 GCTGCGTGCCAACAATGAT 59.786 52.632 0.00 0.00 35.15 2.45
84 85 2.644418 GCTGCGTGCCAACAATGA 59.356 55.556 0.00 0.00 35.15 2.57
85 86 2.801996 CGCTGCGTGCCAACAATG 60.802 61.111 14.93 0.00 38.78 2.82
86 87 4.041917 CCGCTGCGTGCCAACAAT 62.042 61.111 21.59 0.00 38.78 2.71
89 90 3.959975 TTTCCGCTGCGTGCCAAC 61.960 61.111 21.59 0.00 38.78 3.77
90 91 3.959975 GTTTCCGCTGCGTGCCAA 61.960 61.111 21.59 5.15 38.78 4.52
93 94 4.090057 GAGGTTTCCGCTGCGTGC 62.090 66.667 21.59 7.49 38.57 5.34
94 95 0.669318 TAAGAGGTTTCCGCTGCGTG 60.669 55.000 21.59 12.40 33.05 5.34
95 96 0.669625 GTAAGAGGTTTCCGCTGCGT 60.670 55.000 21.59 0.00 33.05 5.24
96 97 0.389948 AGTAAGAGGTTTCCGCTGCG 60.390 55.000 16.34 16.34 33.05 5.18
97 98 1.079503 CAGTAAGAGGTTTCCGCTGC 58.920 55.000 0.00 0.00 33.05 5.25
98 99 1.079503 GCAGTAAGAGGTTTCCGCTG 58.920 55.000 0.00 0.00 33.05 5.18
99 100 0.685097 TGCAGTAAGAGGTTTCCGCT 59.315 50.000 0.00 0.00 34.48 5.52
100 101 0.796927 GTGCAGTAAGAGGTTTCCGC 59.203 55.000 0.00 0.00 0.00 5.54
101 102 1.068474 CGTGCAGTAAGAGGTTTCCG 58.932 55.000 0.00 0.00 0.00 4.30
102 103 1.439679 CCGTGCAGTAAGAGGTTTCC 58.560 55.000 0.00 0.00 0.00 3.13
103 104 0.796927 GCCGTGCAGTAAGAGGTTTC 59.203 55.000 0.00 0.00 0.00 2.78
104 105 0.949105 CGCCGTGCAGTAAGAGGTTT 60.949 55.000 0.00 0.00 0.00 3.27
105 106 1.374252 CGCCGTGCAGTAAGAGGTT 60.374 57.895 0.00 0.00 0.00 3.50
106 107 2.261671 CGCCGTGCAGTAAGAGGT 59.738 61.111 0.00 0.00 0.00 3.85
107 108 2.509336 CCGCCGTGCAGTAAGAGG 60.509 66.667 0.00 0.00 0.00 3.69
108 109 1.517257 CTCCGCCGTGCAGTAAGAG 60.517 63.158 0.00 0.00 0.00 2.85
109 110 2.571757 CTCCGCCGTGCAGTAAGA 59.428 61.111 0.00 0.00 0.00 2.10
110 111 3.188786 GCTCCGCCGTGCAGTAAG 61.189 66.667 0.00 0.00 0.00 2.34
111 112 3.642778 GAGCTCCGCCGTGCAGTAA 62.643 63.158 0.87 0.00 0.00 2.24
112 113 4.129737 GAGCTCCGCCGTGCAGTA 62.130 66.667 0.87 0.00 0.00 2.74
123 124 1.677637 CCACCTACTTCCGGAGCTCC 61.678 65.000 23.79 23.79 0.00 4.70
124 125 1.817209 CCACCTACTTCCGGAGCTC 59.183 63.158 3.34 4.71 0.00 4.09
125 126 2.359967 GCCACCTACTTCCGGAGCT 61.360 63.158 3.34 0.00 0.00 4.09
126 127 2.187163 GCCACCTACTTCCGGAGC 59.813 66.667 3.34 0.00 0.00 4.70
127 128 1.517832 CAGCCACCTACTTCCGGAG 59.482 63.158 3.34 1.34 0.00 4.63
128 129 2.656069 GCAGCCACCTACTTCCGGA 61.656 63.158 0.00 0.00 0.00 5.14
129 130 2.125106 GCAGCCACCTACTTCCGG 60.125 66.667 0.00 0.00 0.00 5.14
130 131 2.125106 GGCAGCCACCTACTTCCG 60.125 66.667 6.55 0.00 0.00 4.30
131 132 2.125106 CGGCAGCCACCTACTTCC 60.125 66.667 13.30 0.00 0.00 3.46
132 133 1.741770 CACGGCAGCCACCTACTTC 60.742 63.158 13.30 0.00 0.00 3.01
133 134 2.347490 CACGGCAGCCACCTACTT 59.653 61.111 13.30 0.00 0.00 2.24
134 135 4.394712 GCACGGCAGCCACCTACT 62.395 66.667 13.30 0.00 0.00 2.57
151 152 3.066190 TCGTGTGCCTCTACGGGG 61.066 66.667 0.00 0.00 40.48 5.73
152 153 2.181021 GTCGTGTGCCTCTACGGG 59.819 66.667 0.00 0.00 40.48 5.28
153 154 1.154016 CTGTCGTGTGCCTCTACGG 60.154 63.158 0.00 0.00 40.48 4.02
154 155 1.154016 CCTGTCGTGTGCCTCTACG 60.154 63.158 0.00 0.00 41.38 3.51
155 156 0.388649 CACCTGTCGTGTGCCTCTAC 60.389 60.000 0.00 0.00 37.73 2.59
156 157 1.532604 CCACCTGTCGTGTGCCTCTA 61.533 60.000 0.00 0.00 41.26 2.43
157 158 2.737180 CACCTGTCGTGTGCCTCT 59.263 61.111 0.00 0.00 37.73 3.69
158 159 2.357517 CCACCTGTCGTGTGCCTC 60.358 66.667 0.00 0.00 41.26 4.70
159 160 3.941188 CCCACCTGTCGTGTGCCT 61.941 66.667 0.00 0.00 41.26 4.75
160 161 4.250305 ACCCACCTGTCGTGTGCC 62.250 66.667 0.00 0.00 41.26 5.01
161 162 2.972505 CACCCACCTGTCGTGTGC 60.973 66.667 0.00 0.00 41.26 4.57
162 163 2.280797 CCACCCACCTGTCGTGTG 60.281 66.667 0.00 0.00 41.26 3.82
163 164 2.445085 TCCACCCACCTGTCGTGT 60.445 61.111 0.00 0.00 41.26 4.49
164 165 2.030562 GTCCACCCACCTGTCGTG 59.969 66.667 0.00 0.00 42.62 4.35
165 166 3.612681 CGTCCACCCACCTGTCGT 61.613 66.667 0.00 0.00 0.00 4.34
167 168 4.699522 GGCGTCCACCCACCTGTC 62.700 72.222 0.00 0.00 0.00 3.51
169 170 4.704833 CTGGCGTCCACCCACCTG 62.705 72.222 0.00 0.00 0.00 4.00
225 226 4.504916 CTGTCGGCTGCCTCTCCG 62.505 72.222 17.92 2.78 46.52 4.63
226 227 4.154347 CCTGTCGGCTGCCTCTCC 62.154 72.222 17.92 2.06 0.00 3.71
227 228 4.154347 CCCTGTCGGCTGCCTCTC 62.154 72.222 17.92 7.34 0.00 3.20
228 229 4.704103 TCCCTGTCGGCTGCCTCT 62.704 66.667 17.92 0.00 0.00 3.69
229 230 4.154347 CTCCCTGTCGGCTGCCTC 62.154 72.222 17.92 10.24 0.00 4.70
232 233 4.828925 GAGCTCCCTGTCGGCTGC 62.829 72.222 0.87 0.00 36.37 5.25
233 234 3.385384 TGAGCTCCCTGTCGGCTG 61.385 66.667 12.15 0.00 36.37 4.85
234 235 3.386237 GTGAGCTCCCTGTCGGCT 61.386 66.667 12.15 0.00 39.16 5.52
235 236 4.803426 CGTGAGCTCCCTGTCGGC 62.803 72.222 12.15 0.00 0.00 5.54
247 248 1.153745 GTGAGCTGGTAGGCGTGAG 60.154 63.158 0.00 0.00 37.29 3.51
248 249 2.970639 GTGAGCTGGTAGGCGTGA 59.029 61.111 0.00 0.00 37.29 4.35
249 250 2.507102 CGTGAGCTGGTAGGCGTG 60.507 66.667 0.00 0.00 37.29 5.34
261 262 4.635925 ACGAAGTGTGAGCGTGAG 57.364 55.556 0.00 0.00 42.51 3.51
276 277 1.599797 AGCAAAACCCCGGAAGACG 60.600 57.895 0.73 0.00 43.80 4.18
277 278 0.536460 TCAGCAAAACCCCGGAAGAC 60.536 55.000 0.73 0.00 0.00 3.01
278 279 0.536460 GTCAGCAAAACCCCGGAAGA 60.536 55.000 0.73 0.00 0.00 2.87
279 280 1.852067 CGTCAGCAAAACCCCGGAAG 61.852 60.000 0.73 0.00 0.00 3.46
280 281 1.894756 CGTCAGCAAAACCCCGGAA 60.895 57.895 0.73 0.00 0.00 4.30
281 282 2.281208 CGTCAGCAAAACCCCGGA 60.281 61.111 0.73 0.00 0.00 5.14
282 283 2.281208 TCGTCAGCAAAACCCCGG 60.281 61.111 0.00 0.00 0.00 5.73
283 284 1.440938 TTGTCGTCAGCAAAACCCCG 61.441 55.000 0.00 0.00 0.00 5.73
284 285 0.741915 TTTGTCGTCAGCAAAACCCC 59.258 50.000 0.00 0.00 33.51 4.95
285 286 1.835121 GTTTGTCGTCAGCAAAACCC 58.165 50.000 0.00 0.00 37.54 4.11
286 287 1.062880 TCGTTTGTCGTCAGCAAAACC 59.937 47.619 0.00 0.00 37.54 3.27
287 288 2.445453 TCGTTTGTCGTCAGCAAAAC 57.555 45.000 0.00 0.00 37.54 2.43
288 289 2.417239 AGTTCGTTTGTCGTCAGCAAAA 59.583 40.909 0.00 0.00 37.54 2.44
289 290 2.004017 AGTTCGTTTGTCGTCAGCAAA 58.996 42.857 0.00 0.00 40.80 3.68
290 291 1.647346 AGTTCGTTTGTCGTCAGCAA 58.353 45.000 0.00 0.00 40.80 3.91
291 292 1.647346 AAGTTCGTTTGTCGTCAGCA 58.353 45.000 0.00 0.00 40.80 4.41
292 293 2.029970 TCAAAGTTCGTTTGTCGTCAGC 59.970 45.455 0.00 0.00 45.18 4.26
293 294 3.306166 ACTCAAAGTTCGTTTGTCGTCAG 59.694 43.478 0.00 0.00 45.18 3.51
294 295 3.255725 ACTCAAAGTTCGTTTGTCGTCA 58.744 40.909 0.00 0.00 45.18 4.35
295 296 3.920112 ACTCAAAGTTCGTTTGTCGTC 57.080 42.857 0.00 0.00 45.18 4.20
296 297 4.866486 AGTTACTCAAAGTTCGTTTGTCGT 59.134 37.500 0.00 0.63 45.18 4.34
297 298 5.385396 AGTTACTCAAAGTTCGTTTGTCG 57.615 39.130 0.00 0.00 45.18 4.35
298 299 9.712359 ATTTTAGTTACTCAAAGTTCGTTTGTC 57.288 29.630 0.00 0.00 45.18 3.18
299 300 9.498307 CATTTTAGTTACTCAAAGTTCGTTTGT 57.502 29.630 0.00 0.00 45.18 2.83
300 301 8.469125 GCATTTTAGTTACTCAAAGTTCGTTTG 58.531 33.333 0.00 0.00 46.17 2.93
301 302 8.403236 AGCATTTTAGTTACTCAAAGTTCGTTT 58.597 29.630 0.00 0.00 0.00 3.60
302 303 7.927048 AGCATTTTAGTTACTCAAAGTTCGTT 58.073 30.769 0.00 0.00 0.00 3.85
303 304 7.492352 AGCATTTTAGTTACTCAAAGTTCGT 57.508 32.000 0.00 0.00 0.00 3.85
304 305 8.922676 TCTAGCATTTTAGTTACTCAAAGTTCG 58.077 33.333 0.00 0.00 0.00 3.95
320 321 8.743714 CCTCCTTTGAAACTTATCTAGCATTTT 58.256 33.333 0.00 0.00 0.00 1.82
321 322 7.890655 ACCTCCTTTGAAACTTATCTAGCATTT 59.109 33.333 0.00 0.00 0.00 2.32
322 323 7.406104 ACCTCCTTTGAAACTTATCTAGCATT 58.594 34.615 0.00 0.00 0.00 3.56
323 324 6.963322 ACCTCCTTTGAAACTTATCTAGCAT 58.037 36.000 0.00 0.00 0.00 3.79
324 325 6.374417 ACCTCCTTTGAAACTTATCTAGCA 57.626 37.500 0.00 0.00 0.00 3.49
325 326 8.666573 GTTAACCTCCTTTGAAACTTATCTAGC 58.333 37.037 0.00 0.00 0.00 3.42
326 327 9.945904 AGTTAACCTCCTTTGAAACTTATCTAG 57.054 33.333 0.88 0.00 0.00 2.43
328 329 9.722184 GTAGTTAACCTCCTTTGAAACTTATCT 57.278 33.333 0.88 0.00 0.00 1.98
329 330 9.722184 AGTAGTTAACCTCCTTTGAAACTTATC 57.278 33.333 0.88 0.00 0.00 1.75
332 333 9.910267 TTTAGTAGTTAACCTCCTTTGAAACTT 57.090 29.630 0.88 0.00 0.00 2.66
333 334 9.557061 CTTTAGTAGTTAACCTCCTTTGAAACT 57.443 33.333 0.88 0.00 0.00 2.66
334 335 8.781196 CCTTTAGTAGTTAACCTCCTTTGAAAC 58.219 37.037 0.88 0.00 0.00 2.78
335 336 8.496916 ACCTTTAGTAGTTAACCTCCTTTGAAA 58.503 33.333 0.88 0.00 0.00 2.69
336 337 7.935210 CACCTTTAGTAGTTAACCTCCTTTGAA 59.065 37.037 0.88 0.00 0.00 2.69
337 338 7.071572 ACACCTTTAGTAGTTAACCTCCTTTGA 59.928 37.037 0.88 0.00 0.00 2.69
338 339 7.222161 ACACCTTTAGTAGTTAACCTCCTTTG 58.778 38.462 0.88 0.00 0.00 2.77
339 340 7.291885 AGACACCTTTAGTAGTTAACCTCCTTT 59.708 37.037 0.88 0.00 0.00 3.11
340 341 6.786461 AGACACCTTTAGTAGTTAACCTCCTT 59.214 38.462 0.88 0.00 0.00 3.36
341 342 6.321321 AGACACCTTTAGTAGTTAACCTCCT 58.679 40.000 0.88 0.00 0.00 3.69
342 343 6.602410 AGACACCTTTAGTAGTTAACCTCC 57.398 41.667 0.88 0.00 0.00 4.30
345 346 9.933723 TGATAAAGACACCTTTAGTAGTTAACC 57.066 33.333 0.88 0.00 45.07 2.85
350 351 9.877178 CTTCATGATAAAGACACCTTTAGTAGT 57.123 33.333 0.00 0.00 45.07 2.73
351 352 9.877178 ACTTCATGATAAAGACACCTTTAGTAG 57.123 33.333 0.00 0.00 45.07 2.57
353 354 9.574516 AAACTTCATGATAAAGACACCTTTAGT 57.425 29.630 0.00 0.00 45.07 2.24
357 358 9.520515 ACATAAACTTCATGATAAAGACACCTT 57.479 29.630 0.00 0.00 0.00 3.50
368 369 9.857656 AAGATCCACATACATAAACTTCATGAT 57.142 29.630 0.00 0.00 0.00 2.45
381 382 9.330063 GTTCAGAATTCATAAGATCCACATACA 57.670 33.333 8.44 0.00 0.00 2.29
382 383 8.778358 GGTTCAGAATTCATAAGATCCACATAC 58.222 37.037 8.44 0.00 0.00 2.39
383 384 8.717717 AGGTTCAGAATTCATAAGATCCACATA 58.282 33.333 8.44 0.00 0.00 2.29
384 385 7.580910 AGGTTCAGAATTCATAAGATCCACAT 58.419 34.615 8.44 0.00 0.00 3.21
385 386 6.962182 AGGTTCAGAATTCATAAGATCCACA 58.038 36.000 8.44 0.00 0.00 4.17
386 387 9.566432 AATAGGTTCAGAATTCATAAGATCCAC 57.434 33.333 8.44 0.00 0.00 4.02
392 393 9.722056 CCGAAAAATAGGTTCAGAATTCATAAG 57.278 33.333 8.44 0.00 0.00 1.73
393 394 9.456147 TCCGAAAAATAGGTTCAGAATTCATAA 57.544 29.630 8.44 0.00 0.00 1.90
394 395 9.109393 CTCCGAAAAATAGGTTCAGAATTCATA 57.891 33.333 8.44 0.00 0.00 2.15
395 396 7.067494 CCTCCGAAAAATAGGTTCAGAATTCAT 59.933 37.037 8.44 0.00 0.00 2.57
396 397 6.374333 CCTCCGAAAAATAGGTTCAGAATTCA 59.626 38.462 8.44 0.00 0.00 2.57
397 398 6.598064 TCCTCCGAAAAATAGGTTCAGAATTC 59.402 38.462 0.00 0.00 0.00 2.17
398 399 6.481643 TCCTCCGAAAAATAGGTTCAGAATT 58.518 36.000 0.00 0.00 0.00 2.17
399 400 6.062258 TCCTCCGAAAAATAGGTTCAGAAT 57.938 37.500 0.00 0.00 0.00 2.40
400 401 5.492855 TCCTCCGAAAAATAGGTTCAGAA 57.507 39.130 0.00 0.00 0.00 3.02
401 402 5.492855 TTCCTCCGAAAAATAGGTTCAGA 57.507 39.130 0.00 0.00 0.00 3.27
402 403 6.569179 TTTTCCTCCGAAAAATAGGTTCAG 57.431 37.500 0.00 0.00 43.38 3.02
439 440 9.428097 GAATTTGATCTTGCAAGAACCTTTTAT 57.572 29.630 31.55 13.69 38.77 1.40
440 441 8.641541 AGAATTTGATCTTGCAAGAACCTTTTA 58.358 29.630 31.55 11.03 38.77 1.52
441 442 7.503549 AGAATTTGATCTTGCAAGAACCTTTT 58.496 30.769 31.55 21.25 38.77 2.27
442 443 7.059202 AGAATTTGATCTTGCAAGAACCTTT 57.941 32.000 31.55 20.36 38.77 3.11
443 444 6.661304 AGAATTTGATCTTGCAAGAACCTT 57.339 33.333 31.55 20.54 38.77 3.50
444 445 6.944862 AGTAGAATTTGATCTTGCAAGAACCT 59.055 34.615 31.55 21.19 38.77 3.50
445 446 7.150783 AGTAGAATTTGATCTTGCAAGAACC 57.849 36.000 31.55 24.57 38.77 3.62
448 449 9.725019 TCTTTAGTAGAATTTGATCTTGCAAGA 57.275 29.630 30.23 30.23 39.78 3.02
451 452 9.896645 AGATCTTTAGTAGAATTTGATCTTGCA 57.103 29.630 0.00 0.00 36.71 4.08
457 458 9.950496 ACACACAGATCTTTAGTAGAATTTGAT 57.050 29.630 0.00 0.00 36.22 2.57
458 459 9.208022 CACACACAGATCTTTAGTAGAATTTGA 57.792 33.333 0.00 0.00 36.22 2.69
459 460 7.959651 GCACACACAGATCTTTAGTAGAATTTG 59.040 37.037 0.00 0.00 36.22 2.32
460 461 7.880195 AGCACACACAGATCTTTAGTAGAATTT 59.120 33.333 0.00 0.00 36.22 1.82
461 462 7.390027 AGCACACACAGATCTTTAGTAGAATT 58.610 34.615 0.00 0.00 36.22 2.17
462 463 6.940739 AGCACACACAGATCTTTAGTAGAAT 58.059 36.000 0.00 0.00 36.22 2.40
463 464 6.346477 AGCACACACAGATCTTTAGTAGAA 57.654 37.500 0.00 0.00 36.22 2.10
464 465 5.105716 GGAGCACACACAGATCTTTAGTAGA 60.106 44.000 0.00 0.00 37.28 2.59
465 466 5.105752 GGAGCACACACAGATCTTTAGTAG 58.894 45.833 0.00 0.00 0.00 2.57
466 467 4.081642 GGGAGCACACACAGATCTTTAGTA 60.082 45.833 0.00 0.00 0.00 1.82
467 468 3.307059 GGGAGCACACACAGATCTTTAGT 60.307 47.826 0.00 0.00 0.00 2.24
468 469 3.055530 AGGGAGCACACACAGATCTTTAG 60.056 47.826 0.00 0.00 0.00 1.85
469 470 2.906389 AGGGAGCACACACAGATCTTTA 59.094 45.455 0.00 0.00 0.00 1.85
470 471 1.701847 AGGGAGCACACACAGATCTTT 59.298 47.619 0.00 0.00 0.00 2.52
471 472 1.356124 AGGGAGCACACACAGATCTT 58.644 50.000 0.00 0.00 0.00 2.40
472 473 1.002888 CAAGGGAGCACACACAGATCT 59.997 52.381 0.00 0.00 0.00 2.75
473 474 1.271054 ACAAGGGAGCACACACAGATC 60.271 52.381 0.00 0.00 0.00 2.75
474 475 0.767375 ACAAGGGAGCACACACAGAT 59.233 50.000 0.00 0.00 0.00 2.90
475 476 0.546122 AACAAGGGAGCACACACAGA 59.454 50.000 0.00 0.00 0.00 3.41
476 477 0.664761 CAACAAGGGAGCACACACAG 59.335 55.000 0.00 0.00 0.00 3.66
477 478 0.034574 ACAACAAGGGAGCACACACA 60.035 50.000 0.00 0.00 0.00 3.72
478 479 1.102978 AACAACAAGGGAGCACACAC 58.897 50.000 0.00 0.00 0.00 3.82
479 480 1.102154 CAACAACAAGGGAGCACACA 58.898 50.000 0.00 0.00 0.00 3.72
480 481 0.385390 CCAACAACAAGGGAGCACAC 59.615 55.000 0.00 0.00 0.00 3.82
481 482 1.391157 GCCAACAACAAGGGAGCACA 61.391 55.000 0.00 0.00 0.00 4.57
482 483 1.109323 AGCCAACAACAAGGGAGCAC 61.109 55.000 0.00 0.00 0.00 4.40
483 484 0.823356 GAGCCAACAACAAGGGAGCA 60.823 55.000 0.00 0.00 0.00 4.26
484 485 0.823356 TGAGCCAACAACAAGGGAGC 60.823 55.000 0.00 0.00 0.00 4.70
485 486 1.542915 CATGAGCCAACAACAAGGGAG 59.457 52.381 0.00 0.00 0.00 4.30
486 487 1.619654 CATGAGCCAACAACAAGGGA 58.380 50.000 0.00 0.00 0.00 4.20
487 488 0.037975 GCATGAGCCAACAACAAGGG 60.038 55.000 0.00 0.00 33.58 3.95
488 489 3.502237 GCATGAGCCAACAACAAGG 57.498 52.632 0.00 0.00 33.58 3.61
500 501 4.147449 TGGTCTCGCCGGCATGAG 62.147 66.667 28.98 24.69 41.21 2.90
501 502 4.451150 GTGGTCTCGCCGGCATGA 62.451 66.667 28.98 20.50 41.21 3.07
502 503 4.758251 TGTGGTCTCGCCGGCATG 62.758 66.667 28.98 18.32 41.21 4.06
503 504 3.740128 GATGTGGTCTCGCCGGCAT 62.740 63.158 28.98 9.60 41.21 4.40
504 505 4.451150 GATGTGGTCTCGCCGGCA 62.451 66.667 28.98 12.94 41.21 5.69
506 507 4.873129 CCGATGTGGTCTCGCCGG 62.873 72.222 0.00 0.00 41.21 6.13
507 508 3.758088 CTCCGATGTGGTCTCGCCG 62.758 68.421 0.00 0.00 41.21 6.46
508 509 2.105128 CTCCGATGTGGTCTCGCC 59.895 66.667 0.00 0.00 39.52 5.54
509 510 2.583593 GCTCCGATGTGGTCTCGC 60.584 66.667 0.00 0.00 39.52 5.03
510 511 1.949847 AAGGCTCCGATGTGGTCTCG 61.950 60.000 0.00 0.00 39.52 4.04
511 512 0.179097 GAAGGCTCCGATGTGGTCTC 60.179 60.000 0.00 0.00 39.52 3.36
512 513 1.901085 GAAGGCTCCGATGTGGTCT 59.099 57.895 0.00 0.00 39.52 3.85
513 514 1.519455 CGAAGGCTCCGATGTGGTC 60.519 63.158 0.00 0.00 39.52 4.02
514 515 2.579201 CGAAGGCTCCGATGTGGT 59.421 61.111 0.00 0.00 39.52 4.16
515 516 2.202932 CCGAAGGCTCCGATGTGG 60.203 66.667 0.00 0.00 46.14 4.17
532 533 4.767255 CAGCCCACTCGGAGCACC 62.767 72.222 4.58 0.00 32.55 5.01
533 534 4.767255 CCAGCCCACTCGGAGCAC 62.767 72.222 4.58 0.00 32.55 4.40
535 536 4.459089 GACCAGCCCACTCGGAGC 62.459 72.222 4.58 0.00 0.00 4.70
536 537 2.681778 AGACCAGCCCACTCGGAG 60.682 66.667 2.83 2.83 0.00 4.63
537 538 2.997315 CAGACCAGCCCACTCGGA 60.997 66.667 0.00 0.00 0.00 4.55
538 539 2.997315 TCAGACCAGCCCACTCGG 60.997 66.667 0.00 0.00 0.00 4.63
539 540 2.575993 CTCAGACCAGCCCACTCG 59.424 66.667 0.00 0.00 0.00 4.18
540 541 2.267324 GCTCAGACCAGCCCACTC 59.733 66.667 0.00 0.00 32.76 3.51
546 547 4.154347 CCCTCGGCTCAGACCAGC 62.154 72.222 0.00 0.00 38.84 4.85
547 548 4.154347 GCCCTCGGCTCAGACCAG 62.154 72.222 0.00 0.00 46.69 4.00
565 566 1.484227 GAAAAACGGCCGTTTGTGCC 61.484 55.000 46.39 32.20 46.22 5.01
566 567 0.526739 AGAAAAACGGCCGTTTGTGC 60.527 50.000 46.39 36.47 46.22 4.57
567 568 1.849829 GAAGAAAAACGGCCGTTTGTG 59.150 47.619 46.39 14.38 46.22 3.33
568 569 1.746787 AGAAGAAAAACGGCCGTTTGT 59.253 42.857 46.39 43.15 46.22 2.83
569 570 2.485266 AGAAGAAAAACGGCCGTTTG 57.515 45.000 46.39 15.59 46.22 2.93
571 572 2.032924 CAGAAGAAGAAAAACGGCCGTT 59.967 45.455 36.96 36.96 40.45 4.44
572 573 1.602377 CAGAAGAAGAAAAACGGCCGT 59.398 47.619 28.70 28.70 0.00 5.68
573 574 1.069227 CCAGAAGAAGAAAAACGGCCG 60.069 52.381 26.86 26.86 0.00 6.13
574 575 1.335964 GCCAGAAGAAGAAAAACGGCC 60.336 52.381 0.00 0.00 32.01 6.13
575 576 1.663161 CGCCAGAAGAAGAAAAACGGC 60.663 52.381 0.00 0.00 34.91 5.68
576 577 1.663161 GCGCCAGAAGAAGAAAAACGG 60.663 52.381 0.00 0.00 0.00 4.44
577 578 1.663161 GGCGCCAGAAGAAGAAAAACG 60.663 52.381 24.80 0.00 0.00 3.60
578 579 1.335964 GGGCGCCAGAAGAAGAAAAAC 60.336 52.381 30.85 0.45 0.00 2.43
579 580 0.958822 GGGCGCCAGAAGAAGAAAAA 59.041 50.000 30.85 0.00 0.00 1.94
580 581 0.893727 GGGGCGCCAGAAGAAGAAAA 60.894 55.000 30.85 0.00 0.00 2.29
581 582 1.303317 GGGGCGCCAGAAGAAGAAA 60.303 57.895 30.85 0.00 0.00 2.52
582 583 2.351276 GGGGCGCCAGAAGAAGAA 59.649 61.111 30.85 0.00 0.00 2.52
583 584 4.082523 CGGGGCGCCAGAAGAAGA 62.083 66.667 30.85 0.00 0.00 2.87
584 585 2.876368 AATCGGGGCGCCAGAAGAAG 62.876 60.000 30.85 10.55 30.57 2.85
585 586 2.478335 AAATCGGGGCGCCAGAAGAA 62.478 55.000 30.85 7.23 30.57 2.52
586 587 2.478335 AAAATCGGGGCGCCAGAAGA 62.478 55.000 30.85 20.74 30.57 2.87
587 588 2.046285 AAAATCGGGGCGCCAGAAG 61.046 57.895 30.85 15.86 30.57 2.85
588 589 2.034999 AAAATCGGGGCGCCAGAA 59.965 55.556 30.85 12.97 30.57 3.02
589 590 2.749839 CAAAATCGGGGCGCCAGA 60.750 61.111 30.85 26.45 31.46 3.86
590 591 2.542211 GAACAAAATCGGGGCGCCAG 62.542 60.000 30.85 21.77 0.00 4.85
591 592 2.598985 AACAAAATCGGGGCGCCA 60.599 55.556 30.85 8.42 0.00 5.69
592 593 1.873270 AAGAACAAAATCGGGGCGCC 61.873 55.000 21.18 21.18 0.00 6.53
593 594 0.038618 AAAGAACAAAATCGGGGCGC 60.039 50.000 0.00 0.00 0.00 6.53
594 595 1.727857 CGAAAGAACAAAATCGGGGCG 60.728 52.381 0.00 0.00 0.00 6.13
595 596 1.538075 TCGAAAGAACAAAATCGGGGC 59.462 47.619 0.00 0.00 37.03 5.80
609 610 4.340894 TGCGAGAAAAATCCATCGAAAG 57.659 40.909 0.00 0.00 37.35 2.62
610 611 4.963276 ATGCGAGAAAAATCCATCGAAA 57.037 36.364 0.00 0.00 37.35 3.46
611 612 4.963276 AATGCGAGAAAAATCCATCGAA 57.037 36.364 0.00 0.00 37.35 3.71
612 613 4.635765 AGAAATGCGAGAAAAATCCATCGA 59.364 37.500 0.00 0.00 37.35 3.59
613 614 4.913376 AGAAATGCGAGAAAAATCCATCG 58.087 39.130 0.00 0.00 38.19 3.84
614 615 7.096312 GCATAAGAAATGCGAGAAAAATCCATC 60.096 37.037 0.00 0.00 35.17 3.51
615 616 6.698766 GCATAAGAAATGCGAGAAAAATCCAT 59.301 34.615 0.00 0.00 35.17 3.41
616 617 6.035843 GCATAAGAAATGCGAGAAAAATCCA 58.964 36.000 0.00 0.00 35.17 3.41
617 618 6.502195 GCATAAGAAATGCGAGAAAAATCC 57.498 37.500 0.00 0.00 35.17 3.01
628 629 2.618241 TCATCCGGTGCATAAGAAATGC 59.382 45.455 0.00 3.05 44.76 3.56
629 630 3.251729 CCTCATCCGGTGCATAAGAAATG 59.748 47.826 0.00 0.00 0.00 2.32
630 631 3.480470 CCTCATCCGGTGCATAAGAAAT 58.520 45.455 0.00 0.00 0.00 2.17
631 632 2.421388 CCCTCATCCGGTGCATAAGAAA 60.421 50.000 0.00 0.00 0.00 2.52
632 633 1.140852 CCCTCATCCGGTGCATAAGAA 59.859 52.381 0.00 0.00 0.00 2.52
633 634 0.758734 CCCTCATCCGGTGCATAAGA 59.241 55.000 0.00 0.00 0.00 2.10
634 635 0.886490 GCCCTCATCCGGTGCATAAG 60.886 60.000 0.00 0.00 0.00 1.73
635 636 1.148273 GCCCTCATCCGGTGCATAA 59.852 57.895 0.00 0.00 0.00 1.90
636 637 1.766059 AGCCCTCATCCGGTGCATA 60.766 57.895 0.00 0.00 0.00 3.14
637 638 3.092511 AGCCCTCATCCGGTGCAT 61.093 61.111 0.00 0.00 0.00 3.96
638 639 4.100084 CAGCCCTCATCCGGTGCA 62.100 66.667 0.00 0.00 0.00 4.57
639 640 4.864334 CCAGCCCTCATCCGGTGC 62.864 72.222 0.00 0.00 0.00 5.01
640 641 4.181010 CCCAGCCCTCATCCGGTG 62.181 72.222 0.00 0.00 0.00 4.94
643 644 4.559063 CAGCCCAGCCCTCATCCG 62.559 72.222 0.00 0.00 0.00 4.18
644 645 4.201122 CCAGCCCAGCCCTCATCC 62.201 72.222 0.00 0.00 0.00 3.51
645 646 4.891037 GCCAGCCCAGCCCTCATC 62.891 72.222 0.00 0.00 0.00 2.92
648 649 2.290021 AATAAGCCAGCCCAGCCCTC 62.290 60.000 0.00 0.00 0.00 4.30
649 650 0.993509 TAATAAGCCAGCCCAGCCCT 60.994 55.000 0.00 0.00 0.00 5.19
650 651 0.823769 GTAATAAGCCAGCCCAGCCC 60.824 60.000 0.00 0.00 0.00 5.19
651 652 0.823769 GGTAATAAGCCAGCCCAGCC 60.824 60.000 0.00 0.00 0.00 4.85
652 653 0.823769 GGGTAATAAGCCAGCCCAGC 60.824 60.000 0.00 0.00 43.18 4.85
653 654 0.846693 AGGGTAATAAGCCAGCCCAG 59.153 55.000 0.00 0.00 46.32 4.45
654 655 0.843984 GAGGGTAATAAGCCAGCCCA 59.156 55.000 0.00 0.00 46.32 5.36
655 656 0.110678 GGAGGGTAATAAGCCAGCCC 59.889 60.000 0.00 0.00 46.32 5.19
656 657 0.843984 TGGAGGGTAATAAGCCAGCC 59.156 55.000 0.00 0.00 46.32 4.85
657 658 2.262423 CTGGAGGGTAATAAGCCAGC 57.738 55.000 0.00 0.00 46.32 4.85
658 659 1.490490 TGCTGGAGGGTAATAAGCCAG 59.510 52.381 0.00 0.00 46.32 4.85
659 660 1.590591 TGCTGGAGGGTAATAAGCCA 58.409 50.000 0.00 0.00 46.32 4.75
660 661 2.959465 ATGCTGGAGGGTAATAAGCC 57.041 50.000 0.00 0.00 44.09 4.35
661 662 2.808543 CGAATGCTGGAGGGTAATAAGC 59.191 50.000 0.00 0.00 0.00 3.09
662 663 2.808543 GCGAATGCTGGAGGGTAATAAG 59.191 50.000 0.00 0.00 38.39 1.73
663 664 2.486548 GGCGAATGCTGGAGGGTAATAA 60.487 50.000 0.00 0.00 42.25 1.40
664 665 1.071699 GGCGAATGCTGGAGGGTAATA 59.928 52.381 0.00 0.00 42.25 0.98
665 666 0.179018 GGCGAATGCTGGAGGGTAAT 60.179 55.000 0.00 0.00 42.25 1.89
674 675 0.649475 CGAGAAAGAGGCGAATGCTG 59.351 55.000 0.00 0.00 42.25 4.41
704 705 1.823169 TAGAACCGCGTTGCTTCCCT 61.823 55.000 4.92 0.00 0.00 4.20
705 706 1.375013 TAGAACCGCGTTGCTTCCC 60.375 57.895 4.92 0.00 0.00 3.97
706 707 0.669625 AGTAGAACCGCGTTGCTTCC 60.670 55.000 4.92 0.00 0.00 3.46
707 708 1.652619 GTAGTAGAACCGCGTTGCTTC 59.347 52.381 4.92 0.00 0.00 3.86
742 743 2.232941 TCCAAAACACGGTCTAGGCTAG 59.767 50.000 15.56 15.56 0.00 3.42
769 779 1.733041 CCGTGTACACTGCGAGGTG 60.733 63.158 23.01 5.46 42.34 4.00
858 906 6.480320 CCTCGAGTCTTTTCTCTTTCTTTGAA 59.520 38.462 12.31 0.00 32.83 2.69
859 907 5.986135 CCTCGAGTCTTTTCTCTTTCTTTGA 59.014 40.000 12.31 0.00 32.83 2.69
860 908 5.178438 CCCTCGAGTCTTTTCTCTTTCTTTG 59.822 44.000 12.31 0.00 32.83 2.77
862 910 4.589374 TCCCTCGAGTCTTTTCTCTTTCTT 59.411 41.667 12.31 0.00 32.83 2.52
863 911 4.153411 TCCCTCGAGTCTTTTCTCTTTCT 58.847 43.478 12.31 0.00 32.83 2.52
864 912 4.218852 TCTCCCTCGAGTCTTTTCTCTTTC 59.781 45.833 12.31 0.00 37.40 2.62
865 913 4.153411 TCTCCCTCGAGTCTTTTCTCTTT 58.847 43.478 12.31 0.00 37.40 2.52
866 914 3.761752 CTCTCCCTCGAGTCTTTTCTCTT 59.238 47.826 12.31 0.00 37.40 2.85
867 915 3.245122 ACTCTCCCTCGAGTCTTTTCTCT 60.245 47.826 12.31 0.00 40.04 3.10
868 916 3.086282 ACTCTCCCTCGAGTCTTTTCTC 58.914 50.000 12.31 0.00 40.04 2.87
869 917 3.163616 ACTCTCCCTCGAGTCTTTTCT 57.836 47.619 12.31 0.00 40.04 2.52
957 1040 3.986996 TGAGGCTTGTGAGATGAATGA 57.013 42.857 0.00 0.00 0.00 2.57
978 1071 4.759205 GGGGCAGCGAAATGGGGT 62.759 66.667 0.00 0.00 0.00 4.95
992 1087 1.912043 CTATAGATGCTGGGAAGGGGG 59.088 57.143 0.00 0.00 0.00 5.40
1051 1146 8.564574 CAAGGTTCTTAATAGTACAAAGCACAA 58.435 33.333 0.00 0.00 0.00 3.33
1169 1341 9.632807 TCAAAACAATGGAAATAAAATCTACCG 57.367 29.630 0.00 0.00 0.00 4.02
1229 1404 4.498682 GCCATTTCTGATGGTATGACAAGC 60.499 45.833 6.88 0.00 41.17 4.01
1270 1461 3.531538 TGATTGTTCTCCTCGGTATTGC 58.468 45.455 0.00 0.00 0.00 3.56
1403 1594 2.095853 GTCAAGGCATGAACATACCGTG 59.904 50.000 11.75 11.75 40.50 4.94
1438 1629 6.475076 TGTCATTTTTGTCAACAAATTCCGAG 59.525 34.615 8.98 0.00 44.30 4.63
1467 1658 5.833131 ACCTCAAAGATACCTTTTCAGCAAA 59.167 36.000 0.00 0.00 40.42 3.68
1850 2054 5.537188 TCCATGCTCCAAACATTGTAAAAC 58.463 37.500 0.00 0.00 0.00 2.43
1870 2074 5.762179 ACAGAACATGAGAAGGTAATCCA 57.238 39.130 0.00 0.00 35.89 3.41
2302 2513 9.988815 CCTAAACTATATATGTTTGACTGAGCT 57.011 33.333 16.79 0.00 38.02 4.09
2380 2591 1.371183 CTCCCTTGCTGACGGTTCA 59.629 57.895 0.00 0.00 0.00 3.18
2525 2738 4.437682 TGTGTCCTTCTGTCCAATTTCT 57.562 40.909 0.00 0.00 0.00 2.52
2526 2739 5.163713 GCTATGTGTCCTTCTGTCCAATTTC 60.164 44.000 0.00 0.00 0.00 2.17
2569 2782 0.462789 CCTGGAGGCCATTTGCATTC 59.537 55.000 5.01 0.00 43.89 2.67
2596 2809 6.942532 TCTAGACCAATTTCAATGCATACC 57.057 37.500 0.00 0.00 0.00 2.73
2659 2872 1.424493 CGAGCCTCCGAACAATGCTC 61.424 60.000 0.00 0.00 43.79 4.26
2670 2883 1.519455 CAACGTCCATCGAGCCTCC 60.519 63.158 0.00 0.00 42.86 4.30
2686 2899 0.251354 TTGCCCTTTTGCTTGCACAA 59.749 45.000 0.00 0.00 32.63 3.33
2778 3002 7.039434 ACTGAAAAAGATTGGAAATTCCTCCTC 60.039 37.037 13.78 7.18 37.46 3.71
2779 3003 6.784473 ACTGAAAAAGATTGGAAATTCCTCCT 59.216 34.615 13.78 4.77 37.46 3.69
2780 3004 6.997655 ACTGAAAAAGATTGGAAATTCCTCC 58.002 36.000 13.78 2.52 37.46 4.30
2791 3016 7.064016 GCCAGAGTAGACTACTGAAAAAGATTG 59.936 40.741 19.90 4.45 39.59 2.67
2797 3029 3.192844 CGGCCAGAGTAGACTACTGAAAA 59.807 47.826 19.90 0.00 39.59 2.29
3046 3379 5.597813 AAATCTGTTGTGAGAAACTAGCG 57.402 39.130 0.00 0.00 0.00 4.26
3069 3402 4.154176 GGGGGTCAGCCTACTTTTAAAAA 58.846 43.478 1.66 0.00 34.45 1.94
3070 3403 3.770046 GGGGGTCAGCCTACTTTTAAAA 58.230 45.455 0.00 0.00 34.45 1.52
3071 3404 2.290450 CGGGGGTCAGCCTACTTTTAAA 60.290 50.000 0.00 0.00 34.45 1.52
3072 3405 1.279846 CGGGGGTCAGCCTACTTTTAA 59.720 52.381 0.00 0.00 34.45 1.52
3073 3406 0.906775 CGGGGGTCAGCCTACTTTTA 59.093 55.000 0.00 0.00 34.45 1.52
3074 3407 1.683441 CGGGGGTCAGCCTACTTTT 59.317 57.895 0.00 0.00 34.45 2.27
3075 3408 2.298661 CCGGGGGTCAGCCTACTTT 61.299 63.158 0.00 0.00 34.45 2.66
3076 3409 2.687566 CCGGGGGTCAGCCTACTT 60.688 66.667 0.00 0.00 34.45 2.24
3085 3418 4.759205 ATGCAAAGGCCGGGGGTC 62.759 66.667 2.18 0.00 40.13 4.46
3086 3419 4.759205 GATGCAAAGGCCGGGGGT 62.759 66.667 2.18 0.00 40.13 4.95
3087 3420 4.757355 TGATGCAAAGGCCGGGGG 62.757 66.667 2.18 0.00 40.13 5.40
3088 3421 2.019897 GATTGATGCAAAGGCCGGGG 62.020 60.000 2.18 0.00 40.13 5.73
3089 3422 1.438814 GATTGATGCAAAGGCCGGG 59.561 57.895 2.18 0.00 40.13 5.73
3090 3423 1.064621 CGATTGATGCAAAGGCCGG 59.935 57.895 0.00 0.00 40.13 6.13
3091 3424 0.664761 ATCGATTGATGCAAAGGCCG 59.335 50.000 0.00 0.00 40.13 6.13
3092 3425 2.129823 CATCGATTGATGCAAAGGCC 57.870 50.000 10.05 0.00 45.06 5.19
3101 3434 2.025898 TGGTTGCATGCATCGATTGAT 58.974 42.857 23.37 0.00 34.28 2.57
3102 3435 1.461559 TGGTTGCATGCATCGATTGA 58.538 45.000 23.37 0.58 0.00 2.57
3103 3436 2.502213 ATGGTTGCATGCATCGATTG 57.498 45.000 23.37 0.00 0.00 2.67
3104 3437 4.859304 AATATGGTTGCATGCATCGATT 57.141 36.364 25.11 18.38 0.00 3.34
3105 3438 6.519679 AATAATATGGTTGCATGCATCGAT 57.480 33.333 23.37 23.71 0.00 3.59
3106 3439 5.963176 AATAATATGGTTGCATGCATCGA 57.037 34.783 23.37 18.42 0.00 3.59
3107 3440 8.692110 ATTTAATAATATGGTTGCATGCATCG 57.308 30.769 23.37 0.00 0.00 3.84
3130 3463 9.551734 ACCTTAAGACTTTGTTACGTTCTTATT 57.448 29.630 3.36 0.00 0.00 1.40
3131 3464 9.201127 GACCTTAAGACTTTGTTACGTTCTTAT 57.799 33.333 3.36 0.00 0.00 1.73
3132 3465 7.653311 GGACCTTAAGACTTTGTTACGTTCTTA 59.347 37.037 3.36 0.00 0.00 2.10
3133 3466 6.481313 GGACCTTAAGACTTTGTTACGTTCTT 59.519 38.462 3.36 0.00 0.00 2.52
3134 3467 5.987953 GGACCTTAAGACTTTGTTACGTTCT 59.012 40.000 3.36 0.00 0.00 3.01
3135 3468 5.754890 TGGACCTTAAGACTTTGTTACGTTC 59.245 40.000 3.36 0.00 0.00 3.95
3136 3469 5.673514 TGGACCTTAAGACTTTGTTACGTT 58.326 37.500 3.36 0.00 0.00 3.99
3137 3470 5.280654 TGGACCTTAAGACTTTGTTACGT 57.719 39.130 3.36 0.00 0.00 3.57
3138 3471 6.607735 TTTGGACCTTAAGACTTTGTTACG 57.392 37.500 3.36 0.00 0.00 3.18
3160 3493 4.708177 TCAACTACTGCTCAGAGCTTTTT 58.292 39.130 23.15 7.33 42.97 1.94
3161 3494 4.342862 TCAACTACTGCTCAGAGCTTTT 57.657 40.909 23.15 9.71 42.97 2.27
3162 3495 4.342862 TTCAACTACTGCTCAGAGCTTT 57.657 40.909 23.15 12.14 42.97 3.51
3163 3496 4.039730 TCTTTCAACTACTGCTCAGAGCTT 59.960 41.667 23.15 12.49 42.97 3.74
3164 3497 3.576118 TCTTTCAACTACTGCTCAGAGCT 59.424 43.478 23.15 6.69 42.97 4.09
3165 3498 3.919216 TCTTTCAACTACTGCTCAGAGC 58.081 45.455 16.21 16.21 42.82 4.09
3166 3499 6.851222 TTTTCTTTCAACTACTGCTCAGAG 57.149 37.500 3.60 0.00 0.00 3.35
3167 3500 8.902540 TTATTTTCTTTCAACTACTGCTCAGA 57.097 30.769 3.60 0.00 0.00 3.27
3168 3501 8.778358 ACTTATTTTCTTTCAACTACTGCTCAG 58.222 33.333 0.00 0.00 0.00 3.35
3169 3502 8.677148 ACTTATTTTCTTTCAACTACTGCTCA 57.323 30.769 0.00 0.00 0.00 4.26
3170 3503 8.994170 AGACTTATTTTCTTTCAACTACTGCTC 58.006 33.333 0.00 0.00 0.00 4.26
3171 3504 8.778358 CAGACTTATTTTCTTTCAACTACTGCT 58.222 33.333 0.00 0.00 0.00 4.24
3172 3505 8.774586 TCAGACTTATTTTCTTTCAACTACTGC 58.225 33.333 0.00 0.00 0.00 4.40
3184 3517 9.956720 CTGTTGTGATTTTCAGACTTATTTTCT 57.043 29.630 0.00 0.00 0.00 2.52
3185 3518 9.950680 TCTGTTGTGATTTTCAGACTTATTTTC 57.049 29.630 0.00 0.00 32.95 2.29
3189 3522 9.950496 ACTATCTGTTGTGATTTTCAGACTTAT 57.050 29.630 0.00 0.00 39.27 1.73
3191 3524 9.778741 TTACTATCTGTTGTGATTTTCAGACTT 57.221 29.630 0.00 0.00 39.27 3.01
3192 3525 9.778741 TTTACTATCTGTTGTGATTTTCAGACT 57.221 29.630 0.00 0.00 39.27 3.24
3203 3536 9.988350 GGTGAATGTATTTTACTATCTGTTGTG 57.012 33.333 0.00 0.00 0.00 3.33
3204 3537 9.733556 TGGTGAATGTATTTTACTATCTGTTGT 57.266 29.630 0.00 0.00 0.00 3.32
3205 3538 9.988350 GTGGTGAATGTATTTTACTATCTGTTG 57.012 33.333 0.00 0.00 0.00 3.33
3206 3539 9.733556 TGTGGTGAATGTATTTTACTATCTGTT 57.266 29.630 0.00 0.00 0.00 3.16
3207 3540 9.733556 TTGTGGTGAATGTATTTTACTATCTGT 57.266 29.630 0.00 0.00 0.00 3.41
3234 3567 2.528041 AGACTGTCCGGTTCTTTGTC 57.472 50.000 0.00 3.19 0.00 3.18
3240 3573 3.938289 AAGACTTAGACTGTCCGGTTC 57.062 47.619 0.00 0.00 35.21 3.62
3363 3696 2.125773 AGGGCTGCAAATGAGAGAAG 57.874 50.000 0.50 0.00 0.00 2.85
3538 4198 5.792741 TGTGGCATAAGCTAAAAGCAATTT 58.207 33.333 1.22 0.00 45.56 1.82
3558 4221 3.648339 AGCAACACCAGCTTAAATGTG 57.352 42.857 0.00 0.00 39.87 3.21
3559 4222 4.582656 TGTTAGCAACACCAGCTTAAATGT 59.417 37.500 0.00 0.00 43.25 2.71
3596 4259 4.957296 TGGAAGTAGTGGAGAACTGAAAC 58.043 43.478 0.00 0.00 40.26 2.78
3644 4309 1.135972 CATGTTGCCCTTCTTTCGTCG 60.136 52.381 0.00 0.00 0.00 5.12
3665 4330 9.654663 GTAATAACAGAGGAAGCTCTTTCTTTA 57.345 33.333 0.00 0.00 36.03 1.85
3709 4376 7.040755 TCCACGATGACACTCAACATTATTTTT 60.041 33.333 0.00 0.00 0.00 1.94
3710 4377 6.429692 TCCACGATGACACTCAACATTATTTT 59.570 34.615 0.00 0.00 0.00 1.82
3722 4389 2.910688 ACAAGTTCCACGATGACACT 57.089 45.000 0.00 0.00 0.00 3.55
3823 4500 7.877003 TCAAATTCTTATTTCAAACCGCACTA 58.123 30.769 0.00 0.00 31.63 2.74
3892 4582 3.464456 TGATGGACCAATGATGAGGGATT 59.536 43.478 0.00 0.00 0.00 3.01
3914 4604 0.546267 ATCTCTGACCAGTGGCCACT 60.546 55.000 33.20 33.20 43.61 4.00
3956 4646 5.645624 AGACTCATACTGATGTCACTTTCG 58.354 41.667 0.00 0.00 34.41 3.46
3964 4654 6.364701 AGCTCTTAGAGACTCATACTGATGT 58.635 40.000 14.14 0.00 34.41 3.06
3966 4656 7.447238 GGTTAGCTCTTAGAGACTCATACTGAT 59.553 40.741 14.14 0.00 0.00 2.90
4002 4692 4.130118 CAAGACTAGCCTTGTCAGTGTTT 58.870 43.478 10.41 0.00 38.87 2.83
4029 4719 0.685097 ACGGTGCACTTACCACTGAT 59.315 50.000 17.98 0.00 41.07 2.90
4036 4726 0.669625 GAGGTGGACGGTGCACTTAC 60.670 60.000 27.90 17.01 38.83 2.34
4041 4731 0.179004 AATTTGAGGTGGACGGTGCA 60.179 50.000 0.00 0.00 0.00 4.57
4113 4803 2.623418 TAGGGTGGTCAGTGATGACT 57.377 50.000 8.18 0.00 38.74 3.41
4249 5124 2.435805 ACGCCAACATGATCCTCTATGT 59.564 45.455 0.00 0.00 39.08 2.29
4262 5137 1.011968 GTCTCGCATGTACGCCAACA 61.012 55.000 0.00 0.00 0.00 3.33
4263 5138 1.011968 TGTCTCGCATGTACGCCAAC 61.012 55.000 0.00 0.00 0.00 3.77
4268 5143 0.108804 ACCCTTGTCTCGCATGTACG 60.109 55.000 0.00 0.00 0.00 3.67
4274 5156 3.618171 GGTAAACCCTTGTCTCGCA 57.382 52.632 0.00 0.00 0.00 5.10
4385 6648 3.491208 CTCCCAAGGAGGCATTGAG 57.509 57.895 2.49 0.00 45.43 3.02
4457 6731 8.786826 AGACATGATTCGTATAAAACTTTGGA 57.213 30.769 0.00 0.00 0.00 3.53
4468 6742 6.381481 TGTACCGTAAGACATGATTCGTAT 57.619 37.500 0.00 0.00 43.02 3.06
4471 6745 5.100259 ACTTGTACCGTAAGACATGATTCG 58.900 41.667 0.00 0.83 43.02 3.34
4531 6805 0.036765 TATTGTTTGGGACGCTCGCT 60.037 50.000 0.00 0.00 0.00 4.93
4539 6813 0.606944 AGCGCGGTTATTGTTTGGGA 60.607 50.000 4.23 0.00 0.00 4.37
4570 6844 1.528309 CGGGAAATAAGGCCGCCAT 60.528 57.895 13.15 1.26 0.00 4.40
4617 6891 0.815734 GCGCTCAGGGTCTACTTACA 59.184 55.000 0.00 0.00 0.00 2.41
4681 6956 1.870055 CGCCAAAACAGCAGGAGCAT 61.870 55.000 0.00 0.00 45.49 3.79
4708 6983 2.743664 TCAAATTCATGCAGACAGACCG 59.256 45.455 0.00 0.00 0.00 4.79
4726 7001 5.935789 CGAACCTAAGTATTTCCAAGGTCAA 59.064 40.000 0.00 0.00 39.64 3.18
4727 7002 5.484715 CGAACCTAAGTATTTCCAAGGTCA 58.515 41.667 0.00 0.00 39.64 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.