Multiple sequence alignment - TraesCS4B01G090800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G090800 chr4B 100.000 3694 0 0 1 3694 93413665 93409972 0.000000e+00 6822.0
1 TraesCS4B01G090800 chr4B 100.000 2592 0 0 3947 6538 93409719 93407128 0.000000e+00 4787.0
2 TraesCS4B01G090800 chr4B 98.268 231 4 0 53 283 93418418 93418188 7.890000e-109 405.0
3 TraesCS4B01G090800 chr4B 92.857 168 9 3 592 757 93412909 93412743 2.360000e-59 241.0
4 TraesCS4B01G090800 chr4B 92.857 168 9 3 757 923 93413074 93412909 2.360000e-59 241.0
5 TraesCS4B01G090800 chr4D 93.060 3487 138 35 293 3692 63048440 63044971 0.000000e+00 5003.0
6 TraesCS4B01G090800 chr4D 92.981 2080 80 23 4439 6474 63044515 63042458 0.000000e+00 2972.0
7 TraesCS4B01G090800 chr4D 97.256 328 9 0 3988 4315 63044944 63044617 2.060000e-154 556.0
8 TraesCS4B01G090800 chr4D 95.238 168 7 1 757 923 63048140 63047973 1.400000e-66 265.0
9 TraesCS4B01G090800 chr4D 91.071 168 12 3 592 757 63047973 63047807 2.370000e-54 224.0
10 TraesCS4B01G090800 chr4D 89.706 68 7 0 6471 6538 62905824 62905757 3.250000e-13 87.9
11 TraesCS4B01G090800 chr4A 91.835 2131 94 30 592 2673 533257583 533259682 0.000000e+00 2898.0
12 TraesCS4B01G090800 chr4A 95.855 1375 38 6 4463 5825 533261289 533262656 0.000000e+00 2206.0
13 TraesCS4B01G090800 chr4A 87.671 949 58 39 2768 3694 533259840 533260751 0.000000e+00 1050.0
14 TraesCS4B01G090800 chr4A 92.763 456 27 3 3981 4436 533260770 533261219 0.000000e+00 654.0
15 TraesCS4B01G090800 chr4A 87.954 523 42 8 5966 6467 533262652 533263174 1.210000e-166 597.0
16 TraesCS4B01G090800 chr4A 95.018 281 11 2 646 923 533256951 533257231 7.780000e-119 438.0
17 TraesCS4B01G090800 chr4A 94.981 259 8 4 592 846 533257063 533257320 1.020000e-107 401.0
18 TraesCS4B01G090800 chr4A 96.000 175 5 1 751 923 533257577 533257751 3.860000e-72 283.0
19 TraesCS4B01G090800 chr4A 96.855 159 4 1 293 451 533256839 533256996 1.400000e-66 265.0
20 TraesCS4B01G090800 chr4A 93.452 168 8 3 592 757 533257751 533257917 5.060000e-61 246.0
21 TraesCS4B01G090800 chr4A 94.690 113 6 0 811 923 533256951 533257063 6.740000e-40 176.0
22 TraesCS4B01G090800 chr4A 97.802 91 0 2 592 681 533257231 533257320 8.780000e-34 156.0
23 TraesCS4B01G090800 chrUn 100.000 399 0 0 4991 5389 478813222 478812824 0.000000e+00 737.0
24 TraesCS4B01G090800 chr2D 81.030 738 130 7 4582 5317 394120045 394119316 4.400000e-161 579.0
25 TraesCS4B01G090800 chr2D 94.014 284 16 1 1 283 56898020 56898303 4.680000e-116 429.0
26 TraesCS4B01G090800 chr2D 91.189 227 20 0 1421 1647 394122557 394122331 6.370000e-80 309.0
27 TraesCS4B01G090800 chr2D 79.137 139 22 7 1494 1629 420312429 420312295 9.030000e-14 89.8
28 TraesCS4B01G090800 chr2B 81.030 738 130 7 4582 5317 465826732 465826003 4.400000e-161 579.0
29 TraesCS4B01G090800 chr2B 96.820 283 9 0 1 283 703694925 703694643 2.130000e-129 473.0
30 TraesCS4B01G090800 chr2B 96.970 231 7 0 53 283 703699661 703699431 7.950000e-104 388.0
31 TraesCS4B01G090800 chr2B 91.189 227 20 0 1421 1647 465829308 465829082 6.370000e-80 309.0
32 TraesCS4B01G090800 chr2A 79.946 743 132 12 4582 5317 532086892 532086160 1.250000e-146 531.0
33 TraesCS4B01G090800 chr2A 90.308 227 22 0 1421 1647 532089414 532089188 1.380000e-76 298.0
34 TraesCS4B01G090800 chr7B 93.333 285 16 3 1 283 4813260 4813543 1.010000e-112 418.0
35 TraesCS4B01G090800 chr7B 92.734 289 13 3 1 283 700566764 700567050 1.700000e-110 411.0
36 TraesCS4B01G090800 chr7B 85.882 85 7 5 5821 5901 458224882 458224965 1.170000e-12 86.1
37 TraesCS4B01G090800 chr7B 86.301 73 10 0 5826 5898 638011492 638011420 5.430000e-11 80.5
38 TraesCS4B01G090800 chr7B 90.385 52 5 0 5900 5951 392819432 392819483 1.180000e-07 69.4
39 TraesCS4B01G090800 chr3A 92.308 286 19 1 1 283 657364163 657364448 2.840000e-108 403.0
40 TraesCS4B01G090800 chr3A 88.312 77 8 1 5826 5901 380107239 380107163 2.510000e-14 91.6
41 TraesCS4B01G090800 chr6A 91.197 284 22 3 1 283 156157712 156157431 3.700000e-102 383.0
42 TraesCS4B01G090800 chr3D 87.805 287 27 7 1 283 571673236 571673518 4.890000e-86 329.0
43 TraesCS4B01G090800 chr3D 86.486 74 9 1 5826 5899 310312973 310312901 5.430000e-11 80.5
44 TraesCS4B01G090800 chr1D 89.333 75 8 0 5824 5898 257509105 257509179 1.940000e-15 95.3
45 TraesCS4B01G090800 chr3B 87.654 81 8 2 5823 5901 783149931 783149851 6.980000e-15 93.5
46 TraesCS4B01G090800 chr3B 87.179 78 9 1 5825 5901 202380960 202380883 3.250000e-13 87.9
47 TraesCS4B01G090800 chr7A 86.250 80 9 2 5820 5898 576374071 576374149 1.170000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G090800 chr4B 93407128 93413665 6537 True 3022.750000 6822 96.428500 1 6538 4 chr4B.!!$R2 6537
1 TraesCS4B01G090800 chr4D 63042458 63048440 5982 True 1804.000000 5003 93.921200 293 6474 5 chr4D.!!$R2 6181
2 TraesCS4B01G090800 chr4A 533256839 533263174 6335 False 780.833333 2898 93.739667 293 6467 12 chr4A.!!$F1 6174
3 TraesCS4B01G090800 chr2D 394119316 394122557 3241 True 444.000000 579 86.109500 1421 5317 2 chr2D.!!$R2 3896
4 TraesCS4B01G090800 chr2B 465826003 465829308 3305 True 444.000000 579 86.109500 1421 5317 2 chr2B.!!$R3 3896
5 TraesCS4B01G090800 chr2A 532086160 532089414 3254 True 414.500000 531 85.127000 1421 5317 2 chr2A.!!$R1 3896

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
199 200 0.102300 GGGTCAAGCCACACAACAAC 59.898 55.0 0.00 0.0 39.65 3.32 F
214 215 0.250727 ACAACCTGCGCCATTGTACT 60.251 50.0 16.58 0.0 34.84 2.73 F
1652 2195 0.752009 TCGAGCTCTCCGTAAGCCAT 60.752 55.0 12.85 0.0 40.75 4.40 F
2541 3435 0.389426 GTCGTATCAACAGGGTGCGT 60.389 55.0 0.00 0.0 0.00 5.24 F
3072 4119 0.035630 GCACTCCTGCTGAATCTGGT 60.036 55.0 0.00 0.0 40.63 4.00 F
4182 5714 1.031235 CAACACCACCAACATCTGCA 58.969 50.0 0.00 0.0 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1741 2498 1.705256 TAAAAGTCGCACGCACTAGG 58.295 50.000 0.00 0.00 0.00 3.02 R
1795 2562 2.502130 TGTTACATGCCAATCCCGTCTA 59.498 45.455 0.00 0.00 0.00 2.59 R
2627 3540 0.179234 TTTGTGACGAAGGGCAGACA 59.821 50.000 0.00 0.00 0.00 3.41 R
4337 5869 0.532862 ACAAGCAACCGACAGGACTG 60.533 55.000 0.00 0.00 41.02 3.51 R
4338 5870 1.045407 TACAAGCAACCGACAGGACT 58.955 50.000 0.00 0.00 41.02 3.85 R
5598 7214 0.036590 TGCTCATGCTGCAGGTGTTA 59.963 50.000 17.12 3.15 40.48 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.455360 ACAAGCTTTCAAGAACAATCTCAA 57.545 33.333 0.00 0.00 33.77 3.02
25 26 6.268566 ACAAGCTTTCAAGAACAATCTCAAC 58.731 36.000 0.00 0.00 33.77 3.18
26 27 5.444663 AGCTTTCAAGAACAATCTCAACC 57.555 39.130 0.00 0.00 33.77 3.77
27 28 5.136105 AGCTTTCAAGAACAATCTCAACCT 58.864 37.500 0.00 0.00 33.77 3.50
28 29 5.595952 AGCTTTCAAGAACAATCTCAACCTT 59.404 36.000 0.00 0.00 33.77 3.50
29 30 5.689068 GCTTTCAAGAACAATCTCAACCTTG 59.311 40.000 0.00 0.00 33.77 3.61
30 31 6.460123 GCTTTCAAGAACAATCTCAACCTTGA 60.460 38.462 0.00 0.00 38.42 3.02
31 32 7.587037 TTTCAAGAACAATCTCAACCTTGAT 57.413 32.000 0.00 0.00 39.45 2.57
32 33 8.690203 TTTCAAGAACAATCTCAACCTTGATA 57.310 30.769 0.00 0.00 39.45 2.15
33 34 7.672983 TCAAGAACAATCTCAACCTTGATAC 57.327 36.000 0.00 0.00 36.21 2.24
34 35 6.368791 TCAAGAACAATCTCAACCTTGATACG 59.631 38.462 0.00 0.00 36.21 3.06
35 36 5.794894 AGAACAATCTCAACCTTGATACGT 58.205 37.500 0.00 0.00 36.46 3.57
36 37 6.231211 AGAACAATCTCAACCTTGATACGTT 58.769 36.000 0.00 0.00 36.46 3.99
37 38 6.710744 AGAACAATCTCAACCTTGATACGTTT 59.289 34.615 0.00 0.00 36.46 3.60
38 39 7.876068 AGAACAATCTCAACCTTGATACGTTTA 59.124 33.333 0.00 0.00 36.46 2.01
39 40 7.596749 ACAATCTCAACCTTGATACGTTTAG 57.403 36.000 0.00 0.00 36.46 1.85
40 41 7.383687 ACAATCTCAACCTTGATACGTTTAGA 58.616 34.615 0.00 0.00 36.46 2.10
41 42 8.041323 ACAATCTCAACCTTGATACGTTTAGAT 58.959 33.333 0.00 0.00 35.47 1.98
42 43 8.883731 CAATCTCAACCTTGATACGTTTAGATT 58.116 33.333 0.00 0.00 40.77 2.40
43 44 7.827819 TCTCAACCTTGATACGTTTAGATTG 57.172 36.000 0.00 0.00 36.46 2.67
44 45 7.608153 TCTCAACCTTGATACGTTTAGATTGA 58.392 34.615 0.00 0.00 36.46 2.57
45 46 7.759886 TCTCAACCTTGATACGTTTAGATTGAG 59.240 37.037 12.94 12.94 40.28 3.02
46 47 6.816640 TCAACCTTGATACGTTTAGATTGAGG 59.183 38.462 0.00 0.00 31.01 3.86
47 48 5.671493 ACCTTGATACGTTTAGATTGAGGG 58.329 41.667 0.00 0.00 0.00 4.30
48 49 5.057149 CCTTGATACGTTTAGATTGAGGGG 58.943 45.833 0.00 0.00 0.00 4.79
49 50 4.682778 TGATACGTTTAGATTGAGGGGG 57.317 45.455 0.00 0.00 0.00 5.40
72 73 9.449719 GGGGGATGTTAAATGATATAGTTGTAG 57.550 37.037 0.00 0.00 0.00 2.74
82 83 8.575565 AATGATATAGTTGTAGTTGTGTAGCG 57.424 34.615 0.00 0.00 0.00 4.26
83 84 7.092137 TGATATAGTTGTAGTTGTGTAGCGT 57.908 36.000 0.00 0.00 0.00 5.07
84 85 6.970613 TGATATAGTTGTAGTTGTGTAGCGTG 59.029 38.462 0.00 0.00 0.00 5.34
85 86 3.720949 AGTTGTAGTTGTGTAGCGTGA 57.279 42.857 0.00 0.00 0.00 4.35
86 87 3.378339 AGTTGTAGTTGTGTAGCGTGAC 58.622 45.455 0.00 0.00 0.00 3.67
87 88 3.117794 GTTGTAGTTGTGTAGCGTGACA 58.882 45.455 0.00 0.00 0.00 3.58
88 89 3.653539 TGTAGTTGTGTAGCGTGACAT 57.346 42.857 0.00 0.00 0.00 3.06
89 90 4.769859 TGTAGTTGTGTAGCGTGACATA 57.230 40.909 0.00 0.00 0.00 2.29
90 91 5.319140 TGTAGTTGTGTAGCGTGACATAT 57.681 39.130 0.00 0.00 0.00 1.78
91 92 5.099575 TGTAGTTGTGTAGCGTGACATATG 58.900 41.667 0.00 0.00 0.00 1.78
92 93 4.188247 AGTTGTGTAGCGTGACATATGT 57.812 40.909 8.43 8.43 0.00 2.29
93 94 4.174009 AGTTGTGTAGCGTGACATATGTC 58.826 43.478 25.95 25.95 44.97 3.06
107 108 6.032722 GACATATGTCACGATGGTGTAAAC 57.967 41.667 27.33 0.00 44.68 2.01
108 109 4.565166 ACATATGTCACGATGGTGTAAACG 59.435 41.667 1.41 0.00 44.68 3.60
109 110 2.512485 TGTCACGATGGTGTAAACGT 57.488 45.000 7.79 0.00 44.68 3.99
111 112 3.650183 CACGATGGTGTAAACGTGC 57.350 52.632 0.00 0.00 46.38 5.34
112 113 0.179260 CACGATGGTGTAAACGTGCG 60.179 55.000 0.00 0.00 46.38 5.34
113 114 0.598158 ACGATGGTGTAAACGTGCGT 60.598 50.000 0.00 0.00 37.58 5.24
114 115 0.179260 CGATGGTGTAAACGTGCGTG 60.179 55.000 0.00 0.00 0.00 5.34
115 116 0.452122 GATGGTGTAAACGTGCGTGC 60.452 55.000 0.00 0.00 0.00 5.34
116 117 2.127906 GGTGTAAACGTGCGTGCG 60.128 61.111 0.00 0.00 37.94 5.34
118 119 1.716378 GTGTAAACGTGCGTGCGTG 60.716 57.895 7.12 0.00 45.00 5.34
119 120 1.877165 TGTAAACGTGCGTGCGTGA 60.877 52.632 7.12 0.00 45.00 4.35
120 121 1.154908 GTAAACGTGCGTGCGTGAG 60.155 57.895 7.12 0.00 45.00 3.51
121 122 1.589461 TAAACGTGCGTGCGTGAGT 60.589 52.632 7.12 0.32 45.00 3.41
122 123 1.146957 TAAACGTGCGTGCGTGAGTT 61.147 50.000 7.12 1.96 45.00 3.01
123 124 2.625706 AAACGTGCGTGCGTGAGTTG 62.626 55.000 7.12 0.00 45.00 3.16
124 125 3.626244 CGTGCGTGCGTGAGTTGT 61.626 61.111 0.00 0.00 0.00 3.32
125 126 2.297195 CGTGCGTGCGTGAGTTGTA 61.297 57.895 0.00 0.00 0.00 2.41
126 127 1.813212 CGTGCGTGCGTGAGTTGTAA 61.813 55.000 0.00 0.00 0.00 2.41
127 128 0.511221 GTGCGTGCGTGAGTTGTAAT 59.489 50.000 0.00 0.00 0.00 1.89
128 129 0.787787 TGCGTGCGTGAGTTGTAATC 59.212 50.000 0.00 0.00 0.00 1.75
129 130 1.068474 GCGTGCGTGAGTTGTAATCT 58.932 50.000 0.00 0.00 0.00 2.40
130 131 2.256174 GCGTGCGTGAGTTGTAATCTA 58.744 47.619 0.00 0.00 0.00 1.98
131 132 2.279136 GCGTGCGTGAGTTGTAATCTAG 59.721 50.000 0.00 0.00 0.00 2.43
132 133 2.852413 CGTGCGTGAGTTGTAATCTAGG 59.148 50.000 0.00 0.00 0.00 3.02
133 134 2.603560 GTGCGTGAGTTGTAATCTAGGC 59.396 50.000 0.00 0.00 0.00 3.93
134 135 2.232696 TGCGTGAGTTGTAATCTAGGCA 59.767 45.455 0.00 0.00 0.00 4.75
135 136 2.860735 GCGTGAGTTGTAATCTAGGCAG 59.139 50.000 0.00 0.00 0.00 4.85
136 137 3.448686 CGTGAGTTGTAATCTAGGCAGG 58.551 50.000 0.00 0.00 0.00 4.85
137 138 3.119101 CGTGAGTTGTAATCTAGGCAGGT 60.119 47.826 0.00 0.00 0.00 4.00
138 139 4.620803 CGTGAGTTGTAATCTAGGCAGGTT 60.621 45.833 0.00 0.00 0.00 3.50
139 140 4.631813 GTGAGTTGTAATCTAGGCAGGTTG 59.368 45.833 0.00 0.00 0.00 3.77
140 141 4.286032 TGAGTTGTAATCTAGGCAGGTTGT 59.714 41.667 0.00 0.00 0.00 3.32
141 142 5.221843 TGAGTTGTAATCTAGGCAGGTTGTT 60.222 40.000 0.00 0.00 0.00 2.83
142 143 5.003804 AGTTGTAATCTAGGCAGGTTGTTG 58.996 41.667 0.00 0.00 0.00 3.33
143 144 4.634012 TGTAATCTAGGCAGGTTGTTGT 57.366 40.909 0.00 0.00 0.00 3.32
144 145 5.748670 TGTAATCTAGGCAGGTTGTTGTA 57.251 39.130 0.00 0.00 0.00 2.41
145 146 5.730550 TGTAATCTAGGCAGGTTGTTGTAG 58.269 41.667 0.00 0.00 0.00 2.74
146 147 4.910458 AATCTAGGCAGGTTGTTGTAGT 57.090 40.909 0.00 0.00 0.00 2.73
147 148 4.910458 ATCTAGGCAGGTTGTTGTAGTT 57.090 40.909 0.00 0.00 0.00 2.24
148 149 4.002906 TCTAGGCAGGTTGTTGTAGTTG 57.997 45.455 0.00 0.00 0.00 3.16
149 150 1.981256 AGGCAGGTTGTTGTAGTTGG 58.019 50.000 0.00 0.00 0.00 3.77
150 151 1.493022 AGGCAGGTTGTTGTAGTTGGA 59.507 47.619 0.00 0.00 0.00 3.53
151 152 1.880027 GGCAGGTTGTTGTAGTTGGAG 59.120 52.381 0.00 0.00 0.00 3.86
152 153 2.486548 GGCAGGTTGTTGTAGTTGGAGA 60.487 50.000 0.00 0.00 0.00 3.71
153 154 3.412386 GCAGGTTGTTGTAGTTGGAGAT 58.588 45.455 0.00 0.00 0.00 2.75
154 155 3.437049 GCAGGTTGTTGTAGTTGGAGATC 59.563 47.826 0.00 0.00 0.00 2.75
155 156 4.003648 CAGGTTGTTGTAGTTGGAGATCC 58.996 47.826 0.00 0.00 0.00 3.36
156 157 3.910627 AGGTTGTTGTAGTTGGAGATCCT 59.089 43.478 0.00 0.00 36.82 3.24
157 158 4.351111 AGGTTGTTGTAGTTGGAGATCCTT 59.649 41.667 0.00 0.00 36.82 3.36
158 159 5.546499 AGGTTGTTGTAGTTGGAGATCCTTA 59.454 40.000 0.00 0.00 36.82 2.69
159 160 6.215636 AGGTTGTTGTAGTTGGAGATCCTTAT 59.784 38.462 0.00 0.00 36.82 1.73
160 161 6.539103 GGTTGTTGTAGTTGGAGATCCTTATC 59.461 42.308 0.00 0.00 36.82 1.75
161 162 7.331791 GTTGTTGTAGTTGGAGATCCTTATCT 58.668 38.462 0.00 0.00 45.46 1.98
162 163 7.496346 TGTTGTAGTTGGAGATCCTTATCTT 57.504 36.000 0.00 0.00 42.73 2.40
163 164 8.603898 TGTTGTAGTTGGAGATCCTTATCTTA 57.396 34.615 0.00 0.00 42.73 2.10
164 165 9.213777 TGTTGTAGTTGGAGATCCTTATCTTAT 57.786 33.333 0.00 0.00 42.73 1.73
182 183 7.986553 ATCTTATATAGACTTGGATGAGGGG 57.013 40.000 0.00 0.00 35.19 4.79
183 184 6.875469 TCTTATATAGACTTGGATGAGGGGT 58.125 40.000 0.00 0.00 0.00 4.95
184 185 6.954684 TCTTATATAGACTTGGATGAGGGGTC 59.045 42.308 0.00 0.00 0.00 4.46
185 186 2.940514 TAGACTTGGATGAGGGGTCA 57.059 50.000 0.00 0.00 0.00 4.02
186 187 2.044793 AGACTTGGATGAGGGGTCAA 57.955 50.000 0.00 0.00 0.00 3.18
187 188 1.912043 AGACTTGGATGAGGGGTCAAG 59.088 52.381 0.00 0.00 41.46 3.02
188 189 0.329596 ACTTGGATGAGGGGTCAAGC 59.670 55.000 0.00 0.00 39.92 4.01
189 190 0.394899 CTTGGATGAGGGGTCAAGCC 60.395 60.000 0.00 0.00 31.73 4.35
190 191 1.139498 TTGGATGAGGGGTCAAGCCA 61.139 55.000 0.01 0.00 39.65 4.75
191 192 1.077429 GGATGAGGGGTCAAGCCAC 60.077 63.158 0.01 0.00 42.42 5.01
192 193 1.685224 GATGAGGGGTCAAGCCACA 59.315 57.895 0.01 0.71 45.35 4.17
193 194 0.678048 GATGAGGGGTCAAGCCACAC 60.678 60.000 0.01 0.00 45.35 3.82
194 195 1.426251 ATGAGGGGTCAAGCCACACA 61.426 55.000 0.01 0.00 45.35 3.72
195 196 1.150536 GAGGGGTCAAGCCACACAA 59.849 57.895 0.01 0.00 45.35 3.33
196 197 1.152756 AGGGGTCAAGCCACACAAC 60.153 57.895 0.01 0.00 45.35 3.32
197 198 1.454847 GGGGTCAAGCCACACAACA 60.455 57.895 0.01 0.00 41.46 3.33
198 199 1.040339 GGGGTCAAGCCACACAACAA 61.040 55.000 0.01 0.00 41.46 2.83
199 200 0.102300 GGGTCAAGCCACACAACAAC 59.898 55.000 0.00 0.00 39.65 3.32
200 201 0.102300 GGTCAAGCCACACAACAACC 59.898 55.000 0.00 0.00 37.17 3.77
201 202 1.102978 GTCAAGCCACACAACAACCT 58.897 50.000 0.00 0.00 0.00 3.50
202 203 1.102154 TCAAGCCACACAACAACCTG 58.898 50.000 0.00 0.00 0.00 4.00
203 204 0.528249 CAAGCCACACAACAACCTGC 60.528 55.000 0.00 0.00 0.00 4.85
204 205 2.003658 AAGCCACACAACAACCTGCG 62.004 55.000 0.00 0.00 0.00 5.18
205 206 2.026014 CCACACAACAACCTGCGC 59.974 61.111 0.00 0.00 0.00 6.09
206 207 2.026014 CACACAACAACCTGCGCC 59.974 61.111 4.18 0.00 0.00 6.53
207 208 2.439338 ACACAACAACCTGCGCCA 60.439 55.556 4.18 0.00 0.00 5.69
208 209 1.827789 ACACAACAACCTGCGCCAT 60.828 52.632 4.18 0.00 0.00 4.40
209 210 1.363443 CACAACAACCTGCGCCATT 59.637 52.632 4.18 0.00 0.00 3.16
210 211 0.940519 CACAACAACCTGCGCCATTG 60.941 55.000 4.18 9.45 0.00 2.82
211 212 1.363443 CAACAACCTGCGCCATTGT 59.637 52.632 4.18 10.17 38.18 2.71
212 213 0.595588 CAACAACCTGCGCCATTGTA 59.404 50.000 17.91 0.00 35.54 2.41
213 214 0.596082 AACAACCTGCGCCATTGTAC 59.404 50.000 17.91 0.00 35.54 2.90
214 215 0.250727 ACAACCTGCGCCATTGTACT 60.251 50.000 16.58 0.00 34.84 2.73
215 216 0.881118 CAACCTGCGCCATTGTACTT 59.119 50.000 4.18 0.00 0.00 2.24
216 217 1.269448 CAACCTGCGCCATTGTACTTT 59.731 47.619 4.18 0.00 0.00 2.66
217 218 0.881118 ACCTGCGCCATTGTACTTTG 59.119 50.000 4.18 0.00 0.00 2.77
218 219 0.881118 CCTGCGCCATTGTACTTTGT 59.119 50.000 4.18 0.00 0.00 2.83
219 220 1.269448 CCTGCGCCATTGTACTTTGTT 59.731 47.619 4.18 0.00 0.00 2.83
220 221 2.584791 CTGCGCCATTGTACTTTGTTC 58.415 47.619 4.18 0.00 0.00 3.18
221 222 1.268352 TGCGCCATTGTACTTTGTTCC 59.732 47.619 4.18 0.00 0.00 3.62
222 223 1.402325 GCGCCATTGTACTTTGTTCCC 60.402 52.381 0.00 0.00 0.00 3.97
223 224 2.159382 CGCCATTGTACTTTGTTCCCT 58.841 47.619 0.00 0.00 0.00 4.20
224 225 2.161609 CGCCATTGTACTTTGTTCCCTC 59.838 50.000 0.00 0.00 0.00 4.30
225 226 3.421844 GCCATTGTACTTTGTTCCCTCT 58.578 45.455 0.00 0.00 0.00 3.69
226 227 4.585879 GCCATTGTACTTTGTTCCCTCTA 58.414 43.478 0.00 0.00 0.00 2.43
227 228 5.193679 GCCATTGTACTTTGTTCCCTCTAT 58.806 41.667 0.00 0.00 0.00 1.98
228 229 6.354130 GCCATTGTACTTTGTTCCCTCTATA 58.646 40.000 0.00 0.00 0.00 1.31
229 230 6.998673 GCCATTGTACTTTGTTCCCTCTATAT 59.001 38.462 0.00 0.00 0.00 0.86
230 231 8.154856 GCCATTGTACTTTGTTCCCTCTATATA 58.845 37.037 0.00 0.00 0.00 0.86
234 235 9.880157 TTGTACTTTGTTCCCTCTATATAACAC 57.120 33.333 0.00 0.00 31.92 3.32
235 236 8.192774 TGTACTTTGTTCCCTCTATATAACACG 58.807 37.037 0.00 0.00 31.92 4.49
236 237 6.047231 ACTTTGTTCCCTCTATATAACACGC 58.953 40.000 0.00 0.00 31.92 5.34
237 238 5.601583 TTGTTCCCTCTATATAACACGCA 57.398 39.130 0.00 0.00 31.92 5.24
238 239 4.940463 TGTTCCCTCTATATAACACGCAC 58.060 43.478 0.00 0.00 0.00 5.34
239 240 3.909776 TCCCTCTATATAACACGCACG 57.090 47.619 0.00 0.00 0.00 5.34
240 241 2.030540 TCCCTCTATATAACACGCACGC 60.031 50.000 0.00 0.00 0.00 5.34
241 242 1.976728 CCTCTATATAACACGCACGCG 59.023 52.381 10.36 10.36 46.03 6.01
253 254 2.512286 CACGCGTCCCTGCATGAT 60.512 61.111 9.86 0.00 27.27 2.45
254 255 2.108514 CACGCGTCCCTGCATGATT 61.109 57.895 9.86 0.00 27.27 2.57
255 256 2.108514 ACGCGTCCCTGCATGATTG 61.109 57.895 5.58 0.00 34.15 2.67
256 257 2.108514 CGCGTCCCTGCATGATTGT 61.109 57.895 0.00 0.00 34.15 2.71
257 258 0.809636 CGCGTCCCTGCATGATTGTA 60.810 55.000 0.00 0.00 34.15 2.41
258 259 1.597742 GCGTCCCTGCATGATTGTAT 58.402 50.000 0.00 0.00 34.15 2.29
259 260 2.766313 GCGTCCCTGCATGATTGTATA 58.234 47.619 0.00 0.00 34.15 1.47
260 261 2.480419 GCGTCCCTGCATGATTGTATAC 59.520 50.000 0.00 0.00 34.15 1.47
261 262 2.731451 CGTCCCTGCATGATTGTATACG 59.269 50.000 0.00 0.00 0.00 3.06
262 263 2.480419 GTCCCTGCATGATTGTATACGC 59.520 50.000 0.00 0.00 0.00 4.42
263 264 2.368548 TCCCTGCATGATTGTATACGCT 59.631 45.455 0.00 0.00 0.00 5.07
264 265 3.141398 CCCTGCATGATTGTATACGCTT 58.859 45.455 0.00 0.00 0.00 4.68
265 266 3.187227 CCCTGCATGATTGTATACGCTTC 59.813 47.826 0.00 0.00 0.00 3.86
266 267 3.187227 CCTGCATGATTGTATACGCTTCC 59.813 47.826 0.00 0.00 0.00 3.46
267 268 3.802866 TGCATGATTGTATACGCTTCCA 58.197 40.909 0.00 0.00 0.00 3.53
268 269 4.195416 TGCATGATTGTATACGCTTCCAA 58.805 39.130 0.00 0.00 0.00 3.53
269 270 4.821260 TGCATGATTGTATACGCTTCCAAT 59.179 37.500 0.00 0.00 0.00 3.16
270 271 5.049474 TGCATGATTGTATACGCTTCCAATC 60.049 40.000 0.00 10.02 42.11 2.67
271 272 5.180117 GCATGATTGTATACGCTTCCAATCT 59.820 40.000 15.17 3.86 42.21 2.40
272 273 6.293626 GCATGATTGTATACGCTTCCAATCTT 60.294 38.462 15.17 9.17 42.21 2.40
273 274 6.844696 TGATTGTATACGCTTCCAATCTTC 57.155 37.500 15.17 0.00 42.21 2.87
274 275 6.582636 TGATTGTATACGCTTCCAATCTTCT 58.417 36.000 15.17 0.00 42.21 2.85
275 276 6.701841 TGATTGTATACGCTTCCAATCTTCTC 59.298 38.462 15.17 0.00 42.21 2.87
276 277 5.854010 TGTATACGCTTCCAATCTTCTCT 57.146 39.130 0.00 0.00 0.00 3.10
277 278 6.222038 TGTATACGCTTCCAATCTTCTCTT 57.778 37.500 0.00 0.00 0.00 2.85
278 279 6.273825 TGTATACGCTTCCAATCTTCTCTTC 58.726 40.000 0.00 0.00 0.00 2.87
279 280 3.971245 ACGCTTCCAATCTTCTCTTCT 57.029 42.857 0.00 0.00 0.00 2.85
280 281 4.278975 ACGCTTCCAATCTTCTCTTCTT 57.721 40.909 0.00 0.00 0.00 2.52
281 282 4.646572 ACGCTTCCAATCTTCTCTTCTTT 58.353 39.130 0.00 0.00 0.00 2.52
282 283 4.693095 ACGCTTCCAATCTTCTCTTCTTTC 59.307 41.667 0.00 0.00 0.00 2.62
283 284 4.934602 CGCTTCCAATCTTCTCTTCTTTCT 59.065 41.667 0.00 0.00 0.00 2.52
284 285 5.063312 CGCTTCCAATCTTCTCTTCTTTCTC 59.937 44.000 0.00 0.00 0.00 2.87
285 286 6.172630 GCTTCCAATCTTCTCTTCTTTCTCT 58.827 40.000 0.00 0.00 0.00 3.10
286 287 6.654582 GCTTCCAATCTTCTCTTCTTTCTCTT 59.345 38.462 0.00 0.00 0.00 2.85
287 288 7.148423 GCTTCCAATCTTCTCTTCTTTCTCTTC 60.148 40.741 0.00 0.00 0.00 2.87
288 289 7.552050 TCCAATCTTCTCTTCTTTCTCTTCT 57.448 36.000 0.00 0.00 0.00 2.85
289 290 7.972301 TCCAATCTTCTCTTCTTTCTCTTCTT 58.028 34.615 0.00 0.00 0.00 2.52
290 291 8.435982 TCCAATCTTCTCTTCTTTCTCTTCTTT 58.564 33.333 0.00 0.00 0.00 2.52
291 292 8.720562 CCAATCTTCTCTTCTTTCTCTTCTTTC 58.279 37.037 0.00 0.00 0.00 2.62
332 338 8.896744 CAGCTGTCCAGATCAAAATTATAAGAA 58.103 33.333 5.25 0.00 0.00 2.52
333 339 9.466497 AGCTGTCCAGATCAAAATTATAAGAAA 57.534 29.630 0.00 0.00 0.00 2.52
334 340 9.727627 GCTGTCCAGATCAAAATTATAAGAAAG 57.272 33.333 0.00 0.00 0.00 2.62
383 389 7.114754 TCTCAGCATTTGGTTTATCTCTGATT 58.885 34.615 0.00 0.00 0.00 2.57
390 396 8.790718 CATTTGGTTTATCTCTGATTAGATGGG 58.209 37.037 0.00 0.00 36.85 4.00
405 411 7.503566 TGATTAGATGGGGAGAAAATGCTTTAG 59.496 37.037 0.00 0.00 0.00 1.85
546 718 6.183360 GGGAGAAAAGGAAGATGCTTATTCAC 60.183 42.308 8.94 0.00 0.00 3.18
688 1215 1.517242 GTTGTCTCCTCAAGCAGTGG 58.483 55.000 0.00 0.00 0.00 4.00
696 1223 2.040278 TCCTCAAGCAGTGGCAGTAATT 59.960 45.455 0.00 0.00 44.61 1.40
747 1275 2.553079 TTATTCGCATTTTCACCGGC 57.447 45.000 0.00 0.00 0.00 6.13
782 1310 4.049186 AGCTCGTATCGAATTAAATGCGT 58.951 39.130 8.96 0.00 34.74 5.24
860 1388 3.834813 TCTCCTCAAGCAGTGACAGTAAT 59.165 43.478 0.00 0.00 31.13 1.89
997 1525 6.303839 AGTTGCCTAGAATTTACCAAGACAA 58.696 36.000 0.00 0.00 0.00 3.18
1110 1645 7.941238 ACTAGTACCAGTAGTAAACAACAGAGA 59.059 37.037 0.00 0.00 32.84 3.10
1216 1751 1.379146 GGGGACTCCAACTCCAACC 59.621 63.158 0.00 0.00 35.00 3.77
1316 1851 0.875059 GCTGTGTTTGTCCTAGGTGC 59.125 55.000 9.08 3.90 0.00 5.01
1340 1879 2.190538 TCCATCCATGCTTCTGTCTCA 58.809 47.619 0.00 0.00 0.00 3.27
1341 1880 2.093288 TCCATCCATGCTTCTGTCTCAC 60.093 50.000 0.00 0.00 0.00 3.51
1342 1881 2.355412 CCATCCATGCTTCTGTCTCACA 60.355 50.000 0.00 0.00 0.00 3.58
1347 1886 3.374367 CCATGCTTCTGTCTCACATCTTG 59.626 47.826 0.00 0.00 0.00 3.02
1348 1887 3.049708 TGCTTCTGTCTCACATCTTGG 57.950 47.619 0.00 0.00 0.00 3.61
1381 1923 2.291465 TGTTGATGTGCTCTGTTCTTGC 59.709 45.455 0.00 0.00 0.00 4.01
1411 1954 7.915930 TGAATTTTTGGTTAATGATGGATGGT 58.084 30.769 0.00 0.00 0.00 3.55
1586 2129 3.452786 CTCGGCGGCTTCCTCTCA 61.453 66.667 7.21 0.00 0.00 3.27
1652 2195 0.752009 TCGAGCTCTCCGTAAGCCAT 60.752 55.000 12.85 0.00 40.75 4.40
1667 2424 2.159382 AGCCATCGTAAAACCACCAAG 58.841 47.619 0.00 0.00 0.00 3.61
1672 2429 5.778862 CCATCGTAAAACCACCAAGAAAAT 58.221 37.500 0.00 0.00 0.00 1.82
1741 2498 2.438868 AAAATTCACGCAGGGAAAGC 57.561 45.000 0.00 0.00 0.00 3.51
1766 2533 2.096417 GTGCGTGCGACTTTTAACTGAT 60.096 45.455 0.00 0.00 0.00 2.90
1795 2562 3.411446 TGAAAAGATTGTGGCGACAGAT 58.589 40.909 0.70 0.00 44.46 2.90
1826 2593 6.426328 GGATTGGCATGTAACAAAAATGTTGA 59.574 34.615 4.55 0.00 33.59 3.18
1829 2596 5.752472 TGGCATGTAACAAAAATGTTGACAG 59.248 36.000 4.55 0.00 33.59 3.51
1956 2769 2.169832 TCAGTCTCTTGCGAAAAGGG 57.830 50.000 0.00 0.00 0.00 3.95
2537 3431 1.131126 CGTACGTCGTATCAACAGGGT 59.869 52.381 8.59 0.00 34.52 4.34
2540 3434 1.410737 CGTCGTATCAACAGGGTGCG 61.411 60.000 0.00 0.00 0.00 5.34
2541 3435 0.389426 GTCGTATCAACAGGGTGCGT 60.389 55.000 0.00 0.00 0.00 5.24
2544 3438 1.024579 GTATCAACAGGGTGCGTGGG 61.025 60.000 0.00 0.00 0.00 4.61
2556 3469 3.023950 CGTGGGCCGTTCGAAAAA 58.976 55.556 0.00 0.00 0.00 1.94
2627 3540 1.544691 GGACGTACACTGTGGACTGAT 59.455 52.381 20.18 6.39 0.00 2.90
2656 3574 4.201685 CCCTTCGTCACAAATATCACGAAC 60.202 45.833 1.81 0.00 44.15 3.95
2711 3741 1.404583 GGATGCACAGACCCAAATTGC 60.405 52.381 0.00 0.00 0.00 3.56
2712 3742 0.609662 ATGCACAGACCCAAATTGCC 59.390 50.000 0.00 0.00 31.94 4.52
2720 3750 1.441311 CCCAAATTGCCGGGCATAC 59.559 57.895 24.49 0.00 38.76 2.39
2732 3762 1.202758 CGGGCATACTCAGGGCATTTA 60.203 52.381 0.00 0.00 31.62 1.40
2739 3769 6.142817 GCATACTCAGGGCATTTATTTTACG 58.857 40.000 0.00 0.00 0.00 3.18
2749 3779 8.626526 AGGGCATTTATTTTACGGTAATGTTAG 58.373 33.333 0.73 0.00 0.00 2.34
2792 3834 4.107622 CGCAAGAAATTTGCCCAAGATAG 58.892 43.478 0.00 0.00 42.10 2.08
2809 3851 9.956720 CCCAAGATAGTCAAATTTGTTCATATC 57.043 33.333 17.47 17.37 0.00 1.63
3072 4119 0.035630 GCACTCCTGCTGAATCTGGT 60.036 55.000 0.00 0.00 40.63 4.00
3139 4186 6.563222 TTTAATCTACAAAACCTTGACCCG 57.437 37.500 0.00 0.00 36.33 5.28
3159 4206 2.602660 CGAAAGGCACACAACAAAAAGG 59.397 45.455 0.00 0.00 0.00 3.11
3265 4314 2.158971 TGCTTATTATCAGTCTGGCGCA 60.159 45.455 10.83 0.00 0.00 6.09
3305 4813 4.299586 TCAAGATCCCATAAAGCACACA 57.700 40.909 0.00 0.00 0.00 3.72
3306 4814 4.661222 TCAAGATCCCATAAAGCACACAA 58.339 39.130 0.00 0.00 0.00 3.33
3315 4823 5.634859 CCCATAAAGCACACAAAAACTCATC 59.365 40.000 0.00 0.00 0.00 2.92
3339 4847 7.872138 TCTATTTGGTAAAAGTGGATCCATCT 58.128 34.615 19.62 13.95 0.00 2.90
3354 4862 7.500227 GTGGATCCATCTCAAGAAATTATCACA 59.500 37.037 19.62 0.00 0.00 3.58
3489 5014 1.657181 GGTCACAAAAACAGCCGCG 60.657 57.895 0.00 0.00 0.00 6.46
3500 5025 2.025969 CAGCCGCGCATATCTCCTG 61.026 63.158 8.75 0.00 0.00 3.86
3507 5032 2.498167 GCGCATATCTCCTGTTGGAAT 58.502 47.619 0.30 0.00 42.66 3.01
3637 5169 6.012771 ACACCACCTACCTAGCTTTCTTATTT 60.013 38.462 0.00 0.00 0.00 1.40
3638 5170 6.884836 CACCACCTACCTAGCTTTCTTATTTT 59.115 38.462 0.00 0.00 0.00 1.82
3971 5503 3.091545 TGGCCTCATGAAAATCCAACTC 58.908 45.455 3.32 0.00 0.00 3.01
3979 5511 8.742777 CCTCATGAAAATCCAACTCAAAGAATA 58.257 33.333 0.00 0.00 0.00 1.75
4027 5559 6.042208 ACACCTCAAAGGCTAGGATAGTTATC 59.958 42.308 8.80 0.00 41.93 1.75
4054 5586 9.677567 TTTTCCTTTGTCTAAAAATGAGAATCG 57.322 29.630 0.00 0.00 38.61 3.34
4182 5714 1.031235 CAACACCACCAACATCTGCA 58.969 50.000 0.00 0.00 0.00 4.41
4248 5780 4.101448 ACACATGAGGGCCTCGGC 62.101 66.667 27.58 6.41 41.06 5.54
4337 5869 8.574251 TTCTATATATGAGAAGACAGAGCTCC 57.426 38.462 10.93 0.00 0.00 4.70
4338 5870 7.694093 TCTATATATGAGAAGACAGAGCTCCA 58.306 38.462 10.93 0.00 0.00 3.86
4339 5871 6.839124 ATATATGAGAAGACAGAGCTCCAG 57.161 41.667 10.93 6.13 0.00 3.86
4342 5874 1.476488 GAGAAGACAGAGCTCCAGTCC 59.524 57.143 25.14 15.27 32.82 3.85
4356 5888 0.532862 CAGTCCTGTCGGTTGCTTGT 60.533 55.000 0.00 0.00 0.00 3.16
4390 5922 6.537301 CACATGAGAAAGCCATTTGCAATATT 59.463 34.615 0.00 0.00 44.83 1.28
4393 5925 6.938507 TGAGAAAGCCATTTGCAATATTTCT 58.061 32.000 17.45 17.45 41.06 2.52
4465 6029 7.887996 TTGCAGAAATTCGCTCAAAATAAAT 57.112 28.000 10.12 0.00 0.00 1.40
4469 6033 8.434661 GCAGAAATTCGCTCAAAATAAATTTCA 58.565 29.630 16.63 0.00 43.65 2.69
4473 6037 7.816945 ATTCGCTCAAAATAAATTTCACTGG 57.183 32.000 0.00 0.00 0.00 4.00
4540 6115 6.345172 CGTTTGCACGTTTTAATTTAGGTTCC 60.345 38.462 0.00 0.00 41.84 3.62
4970 6560 3.129502 CCGCCACTCGTCCGTCTA 61.130 66.667 0.00 0.00 36.19 2.59
4989 6579 2.586357 GGAGATGGGCGAACGCTC 60.586 66.667 18.14 15.38 43.05 5.03
5389 6985 2.106566 GTGAGCAGGAGGATGAGAAGA 58.893 52.381 0.00 0.00 0.00 2.87
5390 6986 2.499289 GTGAGCAGGAGGATGAGAAGAA 59.501 50.000 0.00 0.00 0.00 2.52
5598 7214 5.300792 CAGTTTAAAGGGTGTGTAATGGTGT 59.699 40.000 0.00 0.00 0.00 4.16
5691 7308 4.078537 AGATCAGCTCGCTATCATGTACT 58.921 43.478 0.00 0.00 0.00 2.73
5692 7309 3.906014 TCAGCTCGCTATCATGTACTC 57.094 47.619 0.00 0.00 0.00 2.59
5693 7310 2.554462 TCAGCTCGCTATCATGTACTCC 59.446 50.000 0.00 0.00 0.00 3.85
5694 7311 2.556189 CAGCTCGCTATCATGTACTCCT 59.444 50.000 0.00 0.00 0.00 3.69
5695 7312 3.753797 CAGCTCGCTATCATGTACTCCTA 59.246 47.826 0.00 0.00 0.00 2.94
5759 7376 3.133721 AGCACTAAGTTATCCTCTGCCAG 59.866 47.826 0.00 0.00 0.00 4.85
5804 7421 5.408299 CGCTGATCCGATTAATATTGTTCCA 59.592 40.000 0.00 0.00 0.00 3.53
5823 7440 9.883142 TTGTTCCAAGATACAAATTTTGTTCTT 57.117 25.926 19.15 20.45 42.22 2.52
5824 7441 9.883142 TGTTCCAAGATACAAATTTTGTTCTTT 57.117 25.926 19.15 8.93 42.22 2.52
5852 7469 9.903185 TTTTTAATAAAGTACAAAAACAAGCGC 57.097 25.926 0.00 0.00 0.00 5.92
5863 7480 3.925688 AAACAAGCGCTCATACATACG 57.074 42.857 12.06 0.00 0.00 3.06
5867 7484 2.756964 CGCTCATACATACGCGCG 59.243 61.111 30.96 30.96 39.11 6.86
5868 7485 2.009226 CGCTCATACATACGCGCGT 61.009 57.895 39.05 39.05 39.11 6.01
5869 7486 0.723459 CGCTCATACATACGCGCGTA 60.723 55.000 40.65 40.65 39.11 4.42
5876 7493 2.028287 ACATACGCGCGTATACTCAC 57.972 50.000 44.07 0.00 39.07 3.51
5879 7496 1.785041 TACGCGCGTATACTCACCCC 61.785 60.000 36.55 0.00 0.00 4.95
5883 7500 1.402456 GCGCGTATACTCACCCCTATG 60.402 57.143 8.43 0.00 0.00 2.23
5898 7515 1.468127 CCTATGAATGCACACACGCAA 59.532 47.619 0.00 0.00 46.87 4.85
5900 7517 0.039256 ATGAATGCACACACGCAACC 60.039 50.000 0.00 0.00 46.87 3.77
5903 7520 1.100463 AATGCACACACGCAACCTGA 61.100 50.000 0.00 0.00 46.87 3.86
5907 7524 0.884259 CACACACGCAACCTGATGGA 60.884 55.000 0.00 0.00 37.04 3.41
5911 7528 0.320683 CACGCAACCTGATGGACTGA 60.321 55.000 0.00 0.00 37.04 3.41
5913 7530 0.247460 CGCAACCTGATGGACTGAGA 59.753 55.000 0.00 0.00 37.04 3.27
5918 7535 4.446371 CAACCTGATGGACTGAGAATACC 58.554 47.826 0.00 0.00 37.04 2.73
5920 7537 4.302067 ACCTGATGGACTGAGAATACCAT 58.698 43.478 0.00 0.00 44.40 3.55
5941 7558 5.469479 CATTGTCCACTTAACCATTCAACC 58.531 41.667 0.00 0.00 0.00 3.77
5943 7560 4.735369 TGTCCACTTAACCATTCAACCAT 58.265 39.130 0.00 0.00 0.00 3.55
5946 7563 5.357032 GTCCACTTAACCATTCAACCATAGG 59.643 44.000 0.00 0.00 0.00 2.57
6059 7681 9.835389 TGAAAACTACTTAAGCTACCAAAGTAA 57.165 29.630 1.29 0.00 35.79 2.24
6149 7783 2.423577 GGCTACGAAGAACCACAACAT 58.576 47.619 0.00 0.00 0.00 2.71
6160 7794 1.748879 CACAACATAGGGCCACGGG 60.749 63.158 6.18 0.00 0.00 5.28
6163 7797 3.026431 AACATAGGGCCACGGGTCG 62.026 63.158 6.18 0.00 0.00 4.79
6179 7813 1.286501 GTCGTGCAAGATCCGCATAA 58.713 50.000 5.42 0.39 42.32 1.90
6184 7818 1.286501 GCAAGATCCGCATAACACGA 58.713 50.000 0.00 0.00 0.00 4.35
6191 7825 1.302383 CCGCATAACACGAAGGCCAA 61.302 55.000 5.01 0.00 0.00 4.52
6192 7826 0.519519 CGCATAACACGAAGGCCAAA 59.480 50.000 5.01 0.00 0.00 3.28
6238 7876 6.153340 CCAACCAGATCCAAACATAATTGACT 59.847 38.462 0.00 0.00 31.84 3.41
6292 7930 1.608590 CGGCAAAGATCAACCAACAGT 59.391 47.619 0.00 0.00 0.00 3.55
6317 7957 1.302511 GCAAGAAACCAGCGGGAGA 60.303 57.895 10.86 0.00 38.05 3.71
6350 7990 0.618458 AGCTAGCCACCAATCCGAAA 59.382 50.000 12.13 0.00 0.00 3.46
6354 7994 1.698506 AGCCACCAATCCGAAAAACA 58.301 45.000 0.00 0.00 0.00 2.83
6377 8017 1.380302 GCCTCCACCCTTGTGATGT 59.620 57.895 0.00 0.00 45.76 3.06
6384 8024 1.209504 CACCCTTGTGATGTCCCGTAT 59.790 52.381 0.00 0.00 45.76 3.06
6394 8034 5.046878 TGTGATGTCCCGTATACTTCACTTT 60.047 40.000 19.42 0.00 45.33 2.66
6439 8079 2.756760 CCCAGCATCAGCACATTTTACT 59.243 45.455 0.00 0.00 45.49 2.24
6474 8114 2.879646 GACCGACATCCGAGAGAGTAAT 59.120 50.000 0.00 0.00 41.76 1.89
6475 8115 2.619177 ACCGACATCCGAGAGAGTAATG 59.381 50.000 0.00 0.00 41.76 1.90
6476 8116 2.030717 CCGACATCCGAGAGAGTAATGG 60.031 54.545 0.00 0.00 41.76 3.16
6477 8117 2.605823 CGACATCCGAGAGAGTAATGGC 60.606 54.545 0.00 0.00 41.76 4.40
6478 8118 2.362397 GACATCCGAGAGAGTAATGGCA 59.638 50.000 0.00 0.00 0.00 4.92
6479 8119 2.766263 ACATCCGAGAGAGTAATGGCAA 59.234 45.455 0.00 0.00 0.00 4.52
6480 8120 2.961526 TCCGAGAGAGTAATGGCAAC 57.038 50.000 0.00 0.00 0.00 4.17
6495 8135 3.992643 TGGCAACACCATCAATTCAAAG 58.007 40.909 0.00 0.00 46.36 2.77
6496 8136 3.387374 TGGCAACACCATCAATTCAAAGT 59.613 39.130 0.00 0.00 46.36 2.66
6497 8137 3.989817 GGCAACACCATCAATTCAAAGTC 59.010 43.478 0.00 0.00 38.86 3.01
6498 8138 3.670055 GCAACACCATCAATTCAAAGTCG 59.330 43.478 0.00 0.00 0.00 4.18
6499 8139 4.556501 GCAACACCATCAATTCAAAGTCGA 60.557 41.667 0.00 0.00 0.00 4.20
6500 8140 5.149273 CAACACCATCAATTCAAAGTCGAG 58.851 41.667 0.00 0.00 0.00 4.04
6501 8141 3.189287 ACACCATCAATTCAAAGTCGAGC 59.811 43.478 0.00 0.00 0.00 5.03
6502 8142 3.189080 CACCATCAATTCAAAGTCGAGCA 59.811 43.478 0.00 0.00 0.00 4.26
6503 8143 3.189287 ACCATCAATTCAAAGTCGAGCAC 59.811 43.478 0.00 0.00 0.00 4.40
6504 8144 3.410850 CATCAATTCAAAGTCGAGCACG 58.589 45.455 0.00 0.00 41.26 5.34
6505 8145 2.749776 TCAATTCAAAGTCGAGCACGA 58.250 42.857 0.88 0.88 46.56 4.35
6515 8155 1.937278 TCGAGCACGAGTAGGAGTAG 58.063 55.000 0.88 0.00 43.81 2.57
6516 8156 0.305313 CGAGCACGAGTAGGAGTAGC 59.695 60.000 0.00 0.00 42.66 3.58
6517 8157 0.664224 GAGCACGAGTAGGAGTAGCC 59.336 60.000 0.00 0.00 0.00 3.93
6518 8158 0.034380 AGCACGAGTAGGAGTAGCCA 60.034 55.000 0.00 0.00 40.02 4.75
6519 8159 0.100861 GCACGAGTAGGAGTAGCCAC 59.899 60.000 0.00 0.00 40.02 5.01
6520 8160 1.460504 CACGAGTAGGAGTAGCCACA 58.539 55.000 0.00 0.00 40.02 4.17
6521 8161 1.132643 CACGAGTAGGAGTAGCCACAC 59.867 57.143 0.00 0.00 40.02 3.82
6522 8162 0.739561 CGAGTAGGAGTAGCCACACC 59.260 60.000 0.00 0.00 40.02 4.16
6523 8163 1.112950 GAGTAGGAGTAGCCACACCC 58.887 60.000 0.00 0.00 40.02 4.61
6524 8164 0.412244 AGTAGGAGTAGCCACACCCA 59.588 55.000 0.00 0.00 40.02 4.51
6525 8165 1.203262 AGTAGGAGTAGCCACACCCAA 60.203 52.381 0.00 0.00 40.02 4.12
6526 8166 1.838077 GTAGGAGTAGCCACACCCAAT 59.162 52.381 0.00 0.00 40.02 3.16
6527 8167 2.263895 AGGAGTAGCCACACCCAATA 57.736 50.000 0.00 0.00 40.02 1.90
6528 8168 2.557869 AGGAGTAGCCACACCCAATAA 58.442 47.619 0.00 0.00 40.02 1.40
6529 8169 3.123273 AGGAGTAGCCACACCCAATAAT 58.877 45.455 0.00 0.00 40.02 1.28
6530 8170 4.303794 AGGAGTAGCCACACCCAATAATA 58.696 43.478 0.00 0.00 40.02 0.98
6531 8171 4.348168 AGGAGTAGCCACACCCAATAATAG 59.652 45.833 0.00 0.00 40.02 1.73
6532 8172 4.505039 GGAGTAGCCACACCCAATAATAGG 60.505 50.000 0.00 0.00 36.34 2.57
6533 8173 2.364972 AGCCACACCCAATAATAGGC 57.635 50.000 0.00 0.00 40.85 3.93
6534 8174 1.568597 AGCCACACCCAATAATAGGCA 59.431 47.619 0.00 0.00 42.90 4.75
6535 8175 2.024464 AGCCACACCCAATAATAGGCAA 60.024 45.455 0.00 0.00 42.90 4.52
6536 8176 2.100749 GCCACACCCAATAATAGGCAAC 59.899 50.000 0.00 0.00 40.29 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.417612 GTTGAGATTGTTCTTGAAAGCTTGTA 58.582 34.615 0.00 0.00 30.30 2.41
1 2 6.268566 GTTGAGATTGTTCTTGAAAGCTTGT 58.731 36.000 0.00 0.00 30.30 3.16
2 3 5.689068 GGTTGAGATTGTTCTTGAAAGCTTG 59.311 40.000 0.00 0.00 30.30 4.01
3 4 5.595952 AGGTTGAGATTGTTCTTGAAAGCTT 59.404 36.000 0.00 0.00 30.34 3.74
4 5 5.136105 AGGTTGAGATTGTTCTTGAAAGCT 58.864 37.500 0.00 0.00 30.30 3.74
5 6 5.444663 AGGTTGAGATTGTTCTTGAAAGC 57.555 39.130 0.00 0.00 30.30 3.51
6 7 7.031226 TCAAGGTTGAGATTGTTCTTGAAAG 57.969 36.000 0.00 0.00 38.01 2.62
7 8 7.587037 ATCAAGGTTGAGATTGTTCTTGAAA 57.413 32.000 7.50 0.00 42.17 2.69
8 9 7.095229 CGTATCAAGGTTGAGATTGTTCTTGAA 60.095 37.037 7.50 0.00 42.17 2.69
9 10 6.368791 CGTATCAAGGTTGAGATTGTTCTTGA 59.631 38.462 0.00 0.00 42.77 3.02
10 11 6.147821 ACGTATCAAGGTTGAGATTGTTCTTG 59.852 38.462 0.00 0.00 41.08 3.02
11 12 6.231211 ACGTATCAAGGTTGAGATTGTTCTT 58.769 36.000 0.00 0.00 41.08 2.52
12 13 5.794894 ACGTATCAAGGTTGAGATTGTTCT 58.205 37.500 0.00 0.00 41.08 3.01
13 14 6.481954 AACGTATCAAGGTTGAGATTGTTC 57.518 37.500 0.00 0.00 41.08 3.18
14 15 6.877611 AAACGTATCAAGGTTGAGATTGTT 57.122 33.333 0.00 1.36 41.08 2.83
15 16 7.383687 TCTAAACGTATCAAGGTTGAGATTGT 58.616 34.615 0.00 0.00 36.48 2.71
16 17 7.827819 TCTAAACGTATCAAGGTTGAGATTG 57.172 36.000 0.00 0.00 36.48 2.67
18 19 8.258007 TCAATCTAAACGTATCAAGGTTGAGAT 58.742 33.333 9.64 5.40 46.65 2.75
19 20 7.608153 TCAATCTAAACGTATCAAGGTTGAGA 58.392 34.615 9.64 1.60 42.45 3.27
20 21 7.827819 TCAATCTAAACGTATCAAGGTTGAG 57.172 36.000 9.64 0.00 41.08 3.02
21 22 6.816640 CCTCAATCTAAACGTATCAAGGTTGA 59.183 38.462 11.96 11.96 42.14 3.18
22 23 6.037172 CCCTCAATCTAAACGTATCAAGGTTG 59.963 42.308 0.00 0.00 34.10 3.77
23 24 6.113411 CCCTCAATCTAAACGTATCAAGGTT 58.887 40.000 0.00 0.00 35.28 3.50
24 25 5.396436 CCCCTCAATCTAAACGTATCAAGGT 60.396 44.000 0.00 0.00 0.00 3.50
25 26 5.057149 CCCCTCAATCTAAACGTATCAAGG 58.943 45.833 0.00 0.00 0.00 3.61
26 27 5.057149 CCCCCTCAATCTAAACGTATCAAG 58.943 45.833 0.00 0.00 0.00 3.02
27 28 5.031066 CCCCCTCAATCTAAACGTATCAA 57.969 43.478 0.00 0.00 0.00 2.57
28 29 4.682778 CCCCCTCAATCTAAACGTATCA 57.317 45.455 0.00 0.00 0.00 2.15
46 47 9.449719 CTACAACTATATCATTTAACATCCCCC 57.550 37.037 0.00 0.00 0.00 5.40
56 57 9.031360 CGCTACACAACTACAACTATATCATTT 57.969 33.333 0.00 0.00 0.00 2.32
57 58 8.195436 ACGCTACACAACTACAACTATATCATT 58.805 33.333 0.00 0.00 0.00 2.57
58 59 7.648112 CACGCTACACAACTACAACTATATCAT 59.352 37.037 0.00 0.00 0.00 2.45
59 60 6.970613 CACGCTACACAACTACAACTATATCA 59.029 38.462 0.00 0.00 0.00 2.15
60 61 7.165483 GTCACGCTACACAACTACAACTATATC 59.835 40.741 0.00 0.00 0.00 1.63
61 62 6.971184 GTCACGCTACACAACTACAACTATAT 59.029 38.462 0.00 0.00 0.00 0.86
62 63 6.072563 TGTCACGCTACACAACTACAACTATA 60.073 38.462 0.00 0.00 0.00 1.31
63 64 5.159209 GTCACGCTACACAACTACAACTAT 58.841 41.667 0.00 0.00 0.00 2.12
64 65 4.036616 TGTCACGCTACACAACTACAACTA 59.963 41.667 0.00 0.00 0.00 2.24
65 66 3.181484 TGTCACGCTACACAACTACAACT 60.181 43.478 0.00 0.00 0.00 3.16
66 67 3.117794 TGTCACGCTACACAACTACAAC 58.882 45.455 0.00 0.00 0.00 3.32
67 68 3.439895 TGTCACGCTACACAACTACAA 57.560 42.857 0.00 0.00 0.00 2.41
68 69 3.653539 ATGTCACGCTACACAACTACA 57.346 42.857 0.00 0.00 30.75 2.74
69 70 5.100259 ACATATGTCACGCTACACAACTAC 58.900 41.667 1.41 0.00 30.75 2.73
70 71 5.319140 ACATATGTCACGCTACACAACTA 57.681 39.130 1.41 0.00 30.75 2.24
71 72 4.174009 GACATATGTCACGCTACACAACT 58.826 43.478 27.33 0.00 44.18 3.16
72 73 4.500703 GACATATGTCACGCTACACAAC 57.499 45.455 27.33 0.00 44.18 3.32
84 85 5.276207 CGTTTACACCATCGTGACATATGTC 60.276 44.000 25.95 25.95 43.14 3.06
85 86 4.565166 CGTTTACACCATCGTGACATATGT 59.435 41.667 8.43 8.43 43.14 2.29
86 87 4.565166 ACGTTTACACCATCGTGACATATG 59.435 41.667 0.00 0.00 43.14 1.78
87 88 4.751060 ACGTTTACACCATCGTGACATAT 58.249 39.130 0.00 0.00 43.14 1.78
88 89 4.177165 ACGTTTACACCATCGTGACATA 57.823 40.909 0.00 0.00 43.14 2.29
89 90 3.034721 ACGTTTACACCATCGTGACAT 57.965 42.857 0.00 0.00 43.14 3.06
90 91 2.512485 ACGTTTACACCATCGTGACA 57.488 45.000 0.00 0.00 43.14 3.58
94 95 0.598158 ACGCACGTTTACACCATCGT 60.598 50.000 0.00 0.00 36.99 3.73
95 96 0.179260 CACGCACGTTTACACCATCG 60.179 55.000 0.00 0.00 0.00 3.84
96 97 0.452122 GCACGCACGTTTACACCATC 60.452 55.000 0.00 0.00 0.00 3.51
97 98 1.572447 GCACGCACGTTTACACCAT 59.428 52.632 0.00 0.00 0.00 3.55
98 99 2.872515 CGCACGCACGTTTACACCA 61.873 57.895 0.00 0.00 0.00 4.17
99 100 2.127906 CGCACGCACGTTTACACC 60.128 61.111 0.00 0.00 0.00 4.16
100 101 1.716378 CACGCACGCACGTTTACAC 60.716 57.895 0.00 0.00 45.75 2.90
101 102 1.813212 CTCACGCACGCACGTTTACA 61.813 55.000 0.00 0.00 45.75 2.41
102 103 1.154908 CTCACGCACGCACGTTTAC 60.155 57.895 0.00 0.00 45.75 2.01
103 104 1.146957 AACTCACGCACGCACGTTTA 61.147 50.000 0.00 0.00 45.75 2.01
104 105 2.457778 AACTCACGCACGCACGTTT 61.458 52.632 0.00 0.00 45.75 3.60
105 106 2.888534 AACTCACGCACGCACGTT 60.889 55.556 0.00 0.00 45.75 3.99
107 108 1.813212 TTACAACTCACGCACGCACG 61.813 55.000 0.00 0.00 39.50 5.34
108 109 0.511221 ATTACAACTCACGCACGCAC 59.489 50.000 0.00 0.00 0.00 5.34
109 110 0.787787 GATTACAACTCACGCACGCA 59.212 50.000 0.00 0.00 0.00 5.24
110 111 1.068474 AGATTACAACTCACGCACGC 58.932 50.000 0.00 0.00 0.00 5.34
111 112 2.852413 CCTAGATTACAACTCACGCACG 59.148 50.000 0.00 0.00 0.00 5.34
112 113 2.603560 GCCTAGATTACAACTCACGCAC 59.396 50.000 0.00 0.00 0.00 5.34
113 114 2.232696 TGCCTAGATTACAACTCACGCA 59.767 45.455 0.00 0.00 0.00 5.24
114 115 2.860735 CTGCCTAGATTACAACTCACGC 59.139 50.000 0.00 0.00 0.00 5.34
115 116 3.119101 ACCTGCCTAGATTACAACTCACG 60.119 47.826 0.00 0.00 0.00 4.35
116 117 4.473477 ACCTGCCTAGATTACAACTCAC 57.527 45.455 0.00 0.00 0.00 3.51
117 118 4.286032 ACAACCTGCCTAGATTACAACTCA 59.714 41.667 0.00 0.00 0.00 3.41
118 119 4.833390 ACAACCTGCCTAGATTACAACTC 58.167 43.478 0.00 0.00 0.00 3.01
119 120 4.910458 ACAACCTGCCTAGATTACAACT 57.090 40.909 0.00 0.00 0.00 3.16
120 121 4.760204 ACAACAACCTGCCTAGATTACAAC 59.240 41.667 0.00 0.00 0.00 3.32
121 122 4.980573 ACAACAACCTGCCTAGATTACAA 58.019 39.130 0.00 0.00 0.00 2.41
122 123 4.634012 ACAACAACCTGCCTAGATTACA 57.366 40.909 0.00 0.00 0.00 2.41
123 124 5.731591 ACTACAACAACCTGCCTAGATTAC 58.268 41.667 0.00 0.00 0.00 1.89
124 125 6.170506 CAACTACAACAACCTGCCTAGATTA 58.829 40.000 0.00 0.00 0.00 1.75
125 126 4.910458 ACTACAACAACCTGCCTAGATT 57.090 40.909 0.00 0.00 0.00 2.40
126 127 4.565652 CCAACTACAACAACCTGCCTAGAT 60.566 45.833 0.00 0.00 0.00 1.98
127 128 3.244422 CCAACTACAACAACCTGCCTAGA 60.244 47.826 0.00 0.00 0.00 2.43
128 129 3.074412 CCAACTACAACAACCTGCCTAG 58.926 50.000 0.00 0.00 0.00 3.02
129 130 2.706723 TCCAACTACAACAACCTGCCTA 59.293 45.455 0.00 0.00 0.00 3.93
130 131 1.493022 TCCAACTACAACAACCTGCCT 59.507 47.619 0.00 0.00 0.00 4.75
131 132 1.880027 CTCCAACTACAACAACCTGCC 59.120 52.381 0.00 0.00 0.00 4.85
132 133 2.846193 TCTCCAACTACAACAACCTGC 58.154 47.619 0.00 0.00 0.00 4.85
133 134 4.003648 GGATCTCCAACTACAACAACCTG 58.996 47.826 0.00 0.00 35.64 4.00
134 135 3.910627 AGGATCTCCAACTACAACAACCT 59.089 43.478 0.00 0.00 38.89 3.50
135 136 4.287766 AGGATCTCCAACTACAACAACC 57.712 45.455 0.00 0.00 38.89 3.77
136 137 7.331791 AGATAAGGATCTCCAACTACAACAAC 58.668 38.462 0.00 0.00 38.01 3.32
137 138 7.496346 AGATAAGGATCTCCAACTACAACAA 57.504 36.000 0.00 0.00 38.01 2.83
138 139 7.496346 AAGATAAGGATCTCCAACTACAACA 57.504 36.000 0.00 0.00 41.87 3.33
156 157 9.494055 CCCCTCATCCAAGTCTATATAAGATAA 57.506 37.037 0.00 0.00 36.36 1.75
157 158 8.633724 ACCCCTCATCCAAGTCTATATAAGATA 58.366 37.037 0.00 0.00 36.36 1.98
158 159 7.491681 ACCCCTCATCCAAGTCTATATAAGAT 58.508 38.462 0.00 0.00 36.36 2.40
159 160 6.875469 ACCCCTCATCCAAGTCTATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
160 161 6.726299 TGACCCCTCATCCAAGTCTATATAAG 59.274 42.308 0.00 0.00 0.00 1.73
161 162 6.630131 TGACCCCTCATCCAAGTCTATATAA 58.370 40.000 0.00 0.00 0.00 0.98
162 163 6.227624 TGACCCCTCATCCAAGTCTATATA 57.772 41.667 0.00 0.00 0.00 0.86
163 164 5.093236 TGACCCCTCATCCAAGTCTATAT 57.907 43.478 0.00 0.00 0.00 0.86
164 165 4.552883 TGACCCCTCATCCAAGTCTATA 57.447 45.455 0.00 0.00 0.00 1.31
165 166 3.421394 TGACCCCTCATCCAAGTCTAT 57.579 47.619 0.00 0.00 0.00 1.98
166 167 2.940514 TGACCCCTCATCCAAGTCTA 57.059 50.000 0.00 0.00 0.00 2.59
167 168 1.912043 CTTGACCCCTCATCCAAGTCT 59.088 52.381 0.00 0.00 33.34 3.24
168 169 1.680249 GCTTGACCCCTCATCCAAGTC 60.680 57.143 0.00 0.00 38.50 3.01
169 170 0.329596 GCTTGACCCCTCATCCAAGT 59.670 55.000 0.00 0.00 38.50 3.16
170 171 0.394899 GGCTTGACCCCTCATCCAAG 60.395 60.000 0.00 0.00 39.06 3.61
171 172 1.139498 TGGCTTGACCCCTCATCCAA 61.139 55.000 0.00 0.00 37.83 3.53
172 173 1.541118 TGGCTTGACCCCTCATCCA 60.541 57.895 0.00 0.00 37.83 3.41
173 174 1.077429 GTGGCTTGACCCCTCATCC 60.077 63.158 0.00 0.00 37.83 3.51
174 175 0.678048 GTGTGGCTTGACCCCTCATC 60.678 60.000 0.00 0.00 37.83 2.92
175 176 1.380302 GTGTGGCTTGACCCCTCAT 59.620 57.895 0.00 0.00 37.83 2.90
176 177 1.640593 TTGTGTGGCTTGACCCCTCA 61.641 55.000 0.00 0.00 37.83 3.86
177 178 1.150536 TTGTGTGGCTTGACCCCTC 59.849 57.895 0.00 0.00 37.83 4.30
178 179 1.152756 GTTGTGTGGCTTGACCCCT 60.153 57.895 0.00 0.00 37.83 4.79
179 180 1.040339 TTGTTGTGTGGCTTGACCCC 61.040 55.000 0.00 0.00 37.83 4.95
180 181 0.102300 GTTGTTGTGTGGCTTGACCC 59.898 55.000 0.00 0.00 37.83 4.46
181 182 0.102300 GGTTGTTGTGTGGCTTGACC 59.898 55.000 0.00 0.00 39.84 4.02
182 183 1.102978 AGGTTGTTGTGTGGCTTGAC 58.897 50.000 0.00 0.00 0.00 3.18
183 184 1.102154 CAGGTTGTTGTGTGGCTTGA 58.898 50.000 0.00 0.00 0.00 3.02
184 185 0.528249 GCAGGTTGTTGTGTGGCTTG 60.528 55.000 0.00 0.00 0.00 4.01
185 186 1.815866 GCAGGTTGTTGTGTGGCTT 59.184 52.632 0.00 0.00 0.00 4.35
186 187 2.480610 CGCAGGTTGTTGTGTGGCT 61.481 57.895 0.00 0.00 0.00 4.75
187 188 2.026014 CGCAGGTTGTTGTGTGGC 59.974 61.111 0.00 0.00 0.00 5.01
188 189 2.026014 GCGCAGGTTGTTGTGTGG 59.974 61.111 0.30 0.00 0.00 4.17
189 190 2.026014 GGCGCAGGTTGTTGTGTG 59.974 61.111 10.83 0.00 0.00 3.82
190 191 1.391157 AATGGCGCAGGTTGTTGTGT 61.391 50.000 10.83 0.00 0.00 3.72
191 192 0.940519 CAATGGCGCAGGTTGTTGTG 60.941 55.000 10.83 0.00 0.00 3.33
192 193 1.363443 CAATGGCGCAGGTTGTTGT 59.637 52.632 10.83 0.00 0.00 3.32
193 194 0.595588 TACAATGGCGCAGGTTGTTG 59.404 50.000 23.01 13.99 37.30 3.33
194 195 0.596082 GTACAATGGCGCAGGTTGTT 59.404 50.000 23.01 11.73 37.30 2.83
195 196 0.250727 AGTACAATGGCGCAGGTTGT 60.251 50.000 21.99 21.99 39.26 3.32
196 197 0.881118 AAGTACAATGGCGCAGGTTG 59.119 50.000 10.83 13.19 0.00 3.77
197 198 1.269448 CAAAGTACAATGGCGCAGGTT 59.731 47.619 10.83 0.00 0.00 3.50
198 199 0.881118 CAAAGTACAATGGCGCAGGT 59.119 50.000 10.83 3.51 0.00 4.00
199 200 0.881118 ACAAAGTACAATGGCGCAGG 59.119 50.000 10.83 0.00 0.00 4.85
200 201 2.584791 GAACAAAGTACAATGGCGCAG 58.415 47.619 10.83 0.00 0.00 5.18
201 202 1.268352 GGAACAAAGTACAATGGCGCA 59.732 47.619 10.83 0.00 0.00 6.09
202 203 1.402325 GGGAACAAAGTACAATGGCGC 60.402 52.381 0.00 0.00 0.00 6.53
203 204 2.159382 AGGGAACAAAGTACAATGGCG 58.841 47.619 0.00 0.00 0.00 5.69
204 205 3.421844 AGAGGGAACAAAGTACAATGGC 58.578 45.455 0.00 0.00 0.00 4.40
208 209 9.880157 GTGTTATATAGAGGGAACAAAGTACAA 57.120 33.333 0.00 0.00 33.82 2.41
209 210 8.192774 CGTGTTATATAGAGGGAACAAAGTACA 58.807 37.037 0.00 0.00 33.82 2.90
210 211 7.168804 GCGTGTTATATAGAGGGAACAAAGTAC 59.831 40.741 0.00 0.00 33.82 2.73
211 212 7.147863 TGCGTGTTATATAGAGGGAACAAAGTA 60.148 37.037 0.00 0.00 33.82 2.24
212 213 6.047231 GCGTGTTATATAGAGGGAACAAAGT 58.953 40.000 0.00 0.00 33.82 2.66
213 214 6.018994 GTGCGTGTTATATAGAGGGAACAAAG 60.019 42.308 0.00 0.00 33.82 2.77
214 215 5.813672 GTGCGTGTTATATAGAGGGAACAAA 59.186 40.000 0.00 0.00 33.82 2.83
215 216 5.353938 GTGCGTGTTATATAGAGGGAACAA 58.646 41.667 0.00 0.00 33.82 2.83
216 217 4.498513 CGTGCGTGTTATATAGAGGGAACA 60.499 45.833 0.00 0.00 0.00 3.18
217 218 3.979495 CGTGCGTGTTATATAGAGGGAAC 59.021 47.826 0.00 0.00 0.00 3.62
218 219 3.551454 GCGTGCGTGTTATATAGAGGGAA 60.551 47.826 0.00 0.00 0.00 3.97
219 220 2.030540 GCGTGCGTGTTATATAGAGGGA 60.031 50.000 0.00 0.00 0.00 4.20
220 221 2.325761 GCGTGCGTGTTATATAGAGGG 58.674 52.381 0.00 0.00 0.00 4.30
221 222 1.976728 CGCGTGCGTGTTATATAGAGG 59.023 52.381 6.00 0.00 34.35 3.69
237 238 2.108514 CAATCATGCAGGGACGCGT 61.109 57.895 13.85 13.85 33.35 6.01
238 239 0.809636 TACAATCATGCAGGGACGCG 60.810 55.000 3.53 3.53 33.35 6.01
239 240 1.597742 ATACAATCATGCAGGGACGC 58.402 50.000 0.00 0.00 0.00 5.19
240 241 2.731451 CGTATACAATCATGCAGGGACG 59.269 50.000 0.00 0.00 0.00 4.79
241 242 2.480419 GCGTATACAATCATGCAGGGAC 59.520 50.000 0.00 0.00 0.00 4.46
242 243 2.368548 AGCGTATACAATCATGCAGGGA 59.631 45.455 0.00 0.00 0.00 4.20
243 244 2.771089 AGCGTATACAATCATGCAGGG 58.229 47.619 0.00 0.00 0.00 4.45
244 245 3.187227 GGAAGCGTATACAATCATGCAGG 59.813 47.826 3.32 0.00 0.00 4.85
245 246 3.809279 TGGAAGCGTATACAATCATGCAG 59.191 43.478 3.32 0.00 0.00 4.41
246 247 3.802866 TGGAAGCGTATACAATCATGCA 58.197 40.909 3.32 0.00 0.00 3.96
247 248 4.811555 TTGGAAGCGTATACAATCATGC 57.188 40.909 3.32 0.00 0.00 4.06
251 252 6.926272 AGAGAAGATTGGAAGCGTATACAATC 59.074 38.462 15.61 15.61 45.80 2.67
252 253 6.821388 AGAGAAGATTGGAAGCGTATACAAT 58.179 36.000 3.32 0.36 36.35 2.71
253 254 6.222038 AGAGAAGATTGGAAGCGTATACAA 57.778 37.500 3.32 0.00 0.00 2.41
254 255 5.854010 AGAGAAGATTGGAAGCGTATACA 57.146 39.130 3.32 0.00 0.00 2.29
255 256 6.508777 AGAAGAGAAGATTGGAAGCGTATAC 58.491 40.000 0.00 0.00 0.00 1.47
256 257 6.716934 AGAAGAGAAGATTGGAAGCGTATA 57.283 37.500 0.00 0.00 0.00 1.47
257 258 5.606348 AGAAGAGAAGATTGGAAGCGTAT 57.394 39.130 0.00 0.00 0.00 3.06
258 259 5.407407 AAGAAGAGAAGATTGGAAGCGTA 57.593 39.130 0.00 0.00 0.00 4.42
259 260 3.971245 AGAAGAGAAGATTGGAAGCGT 57.029 42.857 0.00 0.00 0.00 5.07
260 261 4.934602 AGAAAGAAGAGAAGATTGGAAGCG 59.065 41.667 0.00 0.00 0.00 4.68
261 262 6.172630 AGAGAAAGAAGAGAAGATTGGAAGC 58.827 40.000 0.00 0.00 0.00 3.86
262 263 8.096414 AGAAGAGAAAGAAGAGAAGATTGGAAG 58.904 37.037 0.00 0.00 0.00 3.46
263 264 7.972301 AGAAGAGAAAGAAGAGAAGATTGGAA 58.028 34.615 0.00 0.00 0.00 3.53
264 265 7.552050 AGAAGAGAAAGAAGAGAAGATTGGA 57.448 36.000 0.00 0.00 0.00 3.53
265 266 8.620116 AAAGAAGAGAAAGAAGAGAAGATTGG 57.380 34.615 0.00 0.00 0.00 3.16
266 267 9.270640 TGAAAGAAGAGAAAGAAGAGAAGATTG 57.729 33.333 0.00 0.00 0.00 2.67
267 268 9.492973 CTGAAAGAAGAGAAAGAAGAGAAGATT 57.507 33.333 0.00 0.00 34.07 2.40
268 269 8.650490 ACTGAAAGAAGAGAAAGAAGAGAAGAT 58.350 33.333 0.00 0.00 37.43 2.40
269 270 8.017418 ACTGAAAGAAGAGAAAGAAGAGAAGA 57.983 34.615 0.00 0.00 37.43 2.87
270 271 9.410556 CTACTGAAAGAAGAGAAAGAAGAGAAG 57.589 37.037 0.00 0.00 37.43 2.85
271 272 8.364142 CCTACTGAAAGAAGAGAAAGAAGAGAA 58.636 37.037 0.00 0.00 37.43 2.87
272 273 7.524698 GCCTACTGAAAGAAGAGAAAGAAGAGA 60.525 40.741 0.00 0.00 37.43 3.10
273 274 6.589907 GCCTACTGAAAGAAGAGAAAGAAGAG 59.410 42.308 0.00 0.00 37.43 2.85
274 275 6.042093 TGCCTACTGAAAGAAGAGAAAGAAGA 59.958 38.462 0.00 0.00 37.43 2.87
275 276 6.147000 GTGCCTACTGAAAGAAGAGAAAGAAG 59.853 42.308 0.00 0.00 37.43 2.85
276 277 5.992217 GTGCCTACTGAAAGAAGAGAAAGAA 59.008 40.000 0.00 0.00 37.43 2.52
277 278 5.305644 AGTGCCTACTGAAAGAAGAGAAAGA 59.694 40.000 0.00 0.00 37.43 2.52
278 279 5.546526 AGTGCCTACTGAAAGAAGAGAAAG 58.453 41.667 0.00 0.00 37.43 2.62
279 280 5.552870 AGTGCCTACTGAAAGAAGAGAAA 57.447 39.130 0.00 0.00 37.43 2.52
332 338 7.021998 AGCACCTTCCTTCTTTACTTATCTT 57.978 36.000 0.00 0.00 0.00 2.40
333 339 6.628644 AGCACCTTCCTTCTTTACTTATCT 57.371 37.500 0.00 0.00 0.00 1.98
334 340 7.608376 AGAAAGCACCTTCCTTCTTTACTTATC 59.392 37.037 0.00 0.00 0.00 1.75
335 341 7.462590 AGAAAGCACCTTCCTTCTTTACTTAT 58.537 34.615 0.00 0.00 0.00 1.73
336 342 6.838382 AGAAAGCACCTTCCTTCTTTACTTA 58.162 36.000 0.00 0.00 0.00 2.24
337 343 5.696030 AGAAAGCACCTTCCTTCTTTACTT 58.304 37.500 0.00 0.00 0.00 2.24
383 389 6.327386 ACTAAAGCATTTTCTCCCCATCTA 57.673 37.500 0.00 0.00 40.09 1.98
390 396 7.370383 TGATGTGAAACTAAAGCATTTTCTCC 58.630 34.615 0.00 0.00 32.67 3.71
546 718 2.029623 CCAAGGCCATTTCTGATGAGG 58.970 52.381 5.01 0.00 0.00 3.86
720 1248 5.848036 GGTGAAAATGCGAATAATCATCGAG 59.152 40.000 0.00 0.00 42.76 4.04
782 1310 3.117322 TGTTTTTCCTTCCACATGGAGGA 60.117 43.478 11.45 12.05 46.36 3.71
813 1341 8.388484 ACAACCTGATTAAGAATCTGATATGC 57.612 34.615 7.44 0.00 38.64 3.14
816 1344 8.424918 GGAGACAACCTGATTAAGAATCTGATA 58.575 37.037 7.44 0.00 38.64 2.15
875 1403 9.155975 GCGAATAATCATGGACAAGTAGATTAT 57.844 33.333 0.00 0.00 41.25 1.28
889 1417 4.676471 CCGGTGAAAATGCGAATAATCATG 59.324 41.667 0.00 0.00 0.00 3.07
954 1482 5.278604 CAACTTGGCCGGTTATTTATAAGC 58.721 41.667 12.56 2.39 37.39 3.09
997 1525 1.672356 GGGTGTTGCGTGCTCAGAT 60.672 57.895 0.00 0.00 0.00 2.90
1132 1667 2.056223 TTACCTCTCCGGCCCTTCG 61.056 63.158 0.00 0.00 35.61 3.79
1204 1739 1.773635 CCATGGGGTTGGAGTTGGA 59.226 57.895 2.85 0.00 39.25 3.53
1340 1879 6.885918 TCAACATACATGATGAACCAAGATGT 59.114 34.615 0.00 0.00 36.78 3.06
1341 1880 7.324354 TCAACATACATGATGAACCAAGATG 57.676 36.000 0.00 0.00 36.78 2.90
1381 1923 7.882271 TCCATCATTAACCAAAAATTCAAAGGG 59.118 33.333 0.00 0.00 0.00 3.95
1411 1954 1.826720 GGATCCCTACACCAACACGTA 59.173 52.381 0.00 0.00 0.00 3.57
1586 2129 1.755008 GCTGCCGAGGTAGGAGTCT 60.755 63.158 9.22 0.00 0.00 3.24
1652 2195 4.888239 TCCATTTTCTTGGTGGTTTTACGA 59.112 37.500 0.00 0.00 38.01 3.43
1730 2487 2.109126 GCACTAGGCTTTCCCTGCG 61.109 63.158 0.00 0.00 45.91 5.18
1741 2498 1.705256 TAAAAGTCGCACGCACTAGG 58.295 50.000 0.00 0.00 0.00 3.02
1766 2533 6.861055 GTCGCCACAATCTTTTCATTTTTCTA 59.139 34.615 0.00 0.00 0.00 2.10
1795 2562 2.502130 TGTTACATGCCAATCCCGTCTA 59.498 45.455 0.00 0.00 0.00 2.59
1826 2593 7.630082 TCACCTTTACTTGCTTATTATCCTGT 58.370 34.615 0.00 0.00 0.00 4.00
1829 2596 9.174166 TCTTTCACCTTTACTTGCTTATTATCC 57.826 33.333 0.00 0.00 0.00 2.59
2279 3173 4.514577 CGCTTCCCGCCATCGACT 62.515 66.667 0.00 0.00 38.10 4.18
2459 3353 2.105134 TGGCTTGTTCCGGTAGAAGAAA 59.895 45.455 20.20 5.69 37.30 2.52
2504 3398 3.031812 CGACGTACGTACCTTTGCTATC 58.968 50.000 22.87 2.97 37.22 2.08
2540 3434 2.993449 TTATTTTTCGAACGGCCCAC 57.007 45.000 0.00 0.00 0.00 4.61
2541 3435 4.522722 AAATTATTTTTCGAACGGCCCA 57.477 36.364 0.00 0.00 0.00 5.36
2544 3438 7.653523 TCGATTAAATTATTTTTCGAACGGC 57.346 32.000 17.05 0.00 34.98 5.68
2599 3512 3.314080 CCACAGTGTACGTCCACAATTTT 59.686 43.478 14.08 0.00 37.82 1.82
2600 3513 2.875933 CCACAGTGTACGTCCACAATTT 59.124 45.455 14.08 0.00 37.82 1.82
2601 3514 2.103432 TCCACAGTGTACGTCCACAATT 59.897 45.455 14.08 0.00 37.82 2.32
2627 3540 0.179234 TTTGTGACGAAGGGCAGACA 59.821 50.000 0.00 0.00 0.00 3.41
2656 3574 3.009026 GGGTGCAAAAATGGCCTATTTG 58.991 45.455 18.32 18.32 38.93 2.32
2711 3741 2.343475 AATGCCCTGAGTATGCCCGG 62.343 60.000 0.00 0.00 0.00 5.73
2712 3742 0.466189 AAATGCCCTGAGTATGCCCG 60.466 55.000 0.00 0.00 0.00 6.13
2720 3750 6.687081 TTACCGTAAAATAAATGCCCTGAG 57.313 37.500 0.00 0.00 0.00 3.35
2732 3762 8.606602 GTCGGATTTCTAACATTACCGTAAAAT 58.393 33.333 0.00 0.00 39.84 1.82
2739 3769 8.209917 AGATTTGTCGGATTTCTAACATTACC 57.790 34.615 0.00 0.00 0.00 2.85
2749 3779 4.495828 GCGCTTAAAGATTTGTCGGATTTC 59.504 41.667 0.00 0.00 0.00 2.17
2752 3782 3.006940 TGCGCTTAAAGATTTGTCGGAT 58.993 40.909 9.73 0.00 0.00 4.18
2753 3783 2.418692 TGCGCTTAAAGATTTGTCGGA 58.581 42.857 9.73 0.00 0.00 4.55
2754 3784 2.892373 TGCGCTTAAAGATTTGTCGG 57.108 45.000 9.73 0.00 0.00 4.79
2755 3785 4.065423 TCTTGCGCTTAAAGATTTGTCG 57.935 40.909 9.73 0.00 0.00 4.35
2792 3834 7.707104 AGGATTCCGATATGAACAAATTTGAC 58.293 34.615 24.64 16.74 0.00 3.18
2844 3886 4.946160 AAATAAATCCCAGTCAGACCCA 57.054 40.909 0.00 0.00 0.00 4.51
2849 3891 6.763610 GTGGAGTCTAAATAAATCCCAGTCAG 59.236 42.308 0.00 0.00 0.00 3.51
2851 3893 6.650120 TGTGGAGTCTAAATAAATCCCAGTC 58.350 40.000 0.00 0.00 0.00 3.51
2853 3895 6.037172 CGTTGTGGAGTCTAAATAAATCCCAG 59.963 42.308 0.00 0.00 0.00 4.45
3072 4119 4.760530 ACACCTAAAGCAGCATATCAGA 57.239 40.909 0.00 0.00 0.00 3.27
3139 4186 3.595173 ACCTTTTTGTTGTGTGCCTTTC 58.405 40.909 0.00 0.00 0.00 2.62
3305 4813 9.981114 CCACTTTTACCAAATAGATGAGTTTTT 57.019 29.630 0.00 0.00 0.00 1.94
3306 4814 9.362151 TCCACTTTTACCAAATAGATGAGTTTT 57.638 29.630 0.00 0.00 0.00 2.43
3315 4823 7.775093 TGAGATGGATCCACTTTTACCAAATAG 59.225 37.037 18.99 0.00 34.28 1.73
3388 4897 8.898761 TGTGACAAATATATTTACCACCACATC 58.101 33.333 24.36 10.75 33.84 3.06
3457 4982 2.930950 TGTGACCCACTCAAAAGAAGG 58.069 47.619 0.00 0.00 35.11 3.46
3489 5014 3.004106 GCACATTCCAACAGGAGATATGC 59.996 47.826 0.00 0.00 31.86 3.14
3500 5025 8.876275 ATTAATAATCACATGCACATTCCAAC 57.124 30.769 0.00 0.00 0.00 3.77
3637 5169 9.535878 GATTGTAAGTAAATGTTGGTTCCAAAA 57.464 29.630 5.81 1.09 0.00 2.44
3638 5170 8.696374 TGATTGTAAGTAAATGTTGGTTCCAAA 58.304 29.630 5.81 0.00 0.00 3.28
3946 5478 2.105766 GGATTTTCATGAGGCCAAGCT 58.894 47.619 5.01 0.00 0.00 3.74
3947 5479 1.826720 TGGATTTTCATGAGGCCAAGC 59.173 47.619 5.01 0.00 0.00 4.01
3948 5480 3.512724 AGTTGGATTTTCATGAGGCCAAG 59.487 43.478 5.01 0.00 36.21 3.61
3949 5481 3.509442 AGTTGGATTTTCATGAGGCCAA 58.491 40.909 5.01 13.35 33.38 4.52
3950 5482 3.091545 GAGTTGGATTTTCATGAGGCCA 58.908 45.455 5.01 0.00 0.00 5.36
3951 5483 3.091545 TGAGTTGGATTTTCATGAGGCC 58.908 45.455 0.00 0.00 0.00 5.19
3952 5484 4.789012 TTGAGTTGGATTTTCATGAGGC 57.211 40.909 0.00 0.00 0.00 4.70
3953 5485 6.579666 TCTTTGAGTTGGATTTTCATGAGG 57.420 37.500 0.00 0.00 0.00 3.86
4054 5586 2.791849 GCGACGAAGACCTAGACACATC 60.792 54.545 0.00 0.00 0.00 3.06
4182 5714 9.125026 CCTTAATTACCTGAACTTATTGATGCT 57.875 33.333 0.00 0.00 0.00 3.79
4248 5780 1.506262 GGCATACAAACACGCCAGG 59.494 57.895 0.00 0.00 44.25 4.45
4335 5867 1.407656 AAGCAACCGACAGGACTGGA 61.408 55.000 4.14 0.00 41.02 3.86
4336 5868 1.071471 AAGCAACCGACAGGACTGG 59.929 57.895 4.14 0.00 41.02 4.00
4337 5869 0.532862 ACAAGCAACCGACAGGACTG 60.533 55.000 0.00 0.00 41.02 3.51
4338 5870 1.045407 TACAAGCAACCGACAGGACT 58.955 50.000 0.00 0.00 41.02 3.85
4339 5871 1.873698 TTACAAGCAACCGACAGGAC 58.126 50.000 0.00 0.00 41.02 3.85
4404 5936 4.302067 TCTAGATTTGCCCTCTTCCTGAT 58.698 43.478 0.00 0.00 0.00 2.90
4405 5937 3.724478 TCTAGATTTGCCCTCTTCCTGA 58.276 45.455 0.00 0.00 0.00 3.86
4406 5938 4.163078 TCTTCTAGATTTGCCCTCTTCCTG 59.837 45.833 0.00 0.00 0.00 3.86
4407 5939 4.366267 TCTTCTAGATTTGCCCTCTTCCT 58.634 43.478 0.00 0.00 0.00 3.36
4408 5940 4.762289 TCTTCTAGATTTGCCCTCTTCC 57.238 45.455 0.00 0.00 0.00 3.46
4436 5968 4.566545 TGAGCGAATTTCTGCAAAAAGA 57.433 36.364 13.12 0.00 0.00 2.52
4469 6033 9.520515 ACAAGAATAATCAGTACAAAATCCAGT 57.479 29.630 0.00 0.00 0.00 4.00
4540 6115 1.771073 TTCACGCACGCTTTGTCCAG 61.771 55.000 0.00 0.00 0.00 3.86
4970 6560 4.814294 GCGTTCGCCCATCTCCGT 62.814 66.667 5.87 0.00 0.00 4.69
4977 6567 3.371097 GATGGAGAGCGTTCGCCCA 62.371 63.158 18.72 17.18 42.11 5.36
5389 6985 3.534554 TGCATACTGATCACGCAGAATT 58.465 40.909 0.00 0.00 39.20 2.17
5390 6986 3.183793 TGCATACTGATCACGCAGAAT 57.816 42.857 0.00 0.00 39.20 2.40
5598 7214 0.036590 TGCTCATGCTGCAGGTGTTA 59.963 50.000 17.12 3.15 40.48 2.41
5691 7308 8.989131 ACTATTTACACAGCCTTCTTAATAGGA 58.011 33.333 7.73 0.00 34.56 2.94
5737 7354 3.107601 TGGCAGAGGATAACTTAGTGCT 58.892 45.455 0.00 0.00 33.56 4.40
5759 7376 1.787012 AACCGTACCACGTGTTCATC 58.213 50.000 15.65 0.00 40.58 2.92
5826 7443 9.903185 GCGCTTGTTTTTGTACTTTATTAAAAA 57.097 25.926 0.00 0.00 31.72 1.94
5836 7453 4.513692 TGTATGAGCGCTTGTTTTTGTACT 59.486 37.500 13.26 0.00 0.00 2.73
5842 7459 3.485216 GCGTATGTATGAGCGCTTGTTTT 60.485 43.478 13.26 0.00 45.48 2.43
5844 7461 1.593006 GCGTATGTATGAGCGCTTGTT 59.407 47.619 13.26 1.59 45.48 2.83
5845 7462 1.209128 GCGTATGTATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
5863 7480 0.886563 ATAGGGGTGAGTATACGCGC 59.113 55.000 5.73 11.27 34.64 6.86
5864 7481 2.156917 TCATAGGGGTGAGTATACGCG 58.843 52.381 3.53 3.53 34.64 6.01
5866 7483 4.021456 TGCATTCATAGGGGTGAGTATACG 60.021 45.833 0.00 0.00 0.00 3.06
5867 7484 5.221641 TGTGCATTCATAGGGGTGAGTATAC 60.222 44.000 0.00 0.00 0.00 1.47
5868 7485 4.904853 TGTGCATTCATAGGGGTGAGTATA 59.095 41.667 0.00 0.00 0.00 1.47
5869 7486 3.716353 TGTGCATTCATAGGGGTGAGTAT 59.284 43.478 0.00 0.00 0.00 2.12
5876 7493 1.016627 CGTGTGTGCATTCATAGGGG 58.983 55.000 0.00 0.00 0.00 4.79
5879 7496 2.508867 GTTGCGTGTGTGCATTCATAG 58.491 47.619 0.00 0.00 45.78 2.23
5883 7500 0.661187 CAGGTTGCGTGTGTGCATTC 60.661 55.000 0.00 0.00 45.78 2.67
5898 7515 3.724478 TGGTATTCTCAGTCCATCAGGT 58.276 45.455 0.00 0.00 35.89 4.00
5900 7517 5.678583 ACAATGGTATTCTCAGTCCATCAG 58.321 41.667 0.00 0.00 39.39 2.90
5903 7520 4.474651 TGGACAATGGTATTCTCAGTCCAT 59.525 41.667 7.25 0.00 46.38 3.41
5907 7524 5.505181 AAGTGGACAATGGTATTCTCAGT 57.495 39.130 0.00 0.00 0.00 3.41
5911 7528 6.134535 TGGTTAAGTGGACAATGGTATTCT 57.865 37.500 0.00 0.00 0.00 2.40
5913 7530 6.951198 TGAATGGTTAAGTGGACAATGGTATT 59.049 34.615 0.00 0.00 0.00 1.89
5918 7535 5.010516 TGGTTGAATGGTTAAGTGGACAATG 59.989 40.000 0.00 0.00 0.00 2.82
5920 7537 4.537751 TGGTTGAATGGTTAAGTGGACAA 58.462 39.130 0.00 0.00 0.00 3.18
6059 7681 3.194116 GGAAACATGCTGTGGATGTTGAT 59.806 43.478 15.89 4.07 42.04 2.57
6060 7682 2.557924 GGAAACATGCTGTGGATGTTGA 59.442 45.455 15.89 0.00 42.04 3.18
6160 7794 1.004927 GTTATGCGGATCTTGCACGAC 60.005 52.381 13.99 11.75 46.57 4.34
6163 7797 1.267532 CGTGTTATGCGGATCTTGCAC 60.268 52.381 13.99 0.00 46.57 4.57
6174 7808 2.163412 TCATTTGGCCTTCGTGTTATGC 59.837 45.455 3.32 0.00 0.00 3.14
6179 7813 1.238439 CAGTCATTTGGCCTTCGTGT 58.762 50.000 3.32 0.00 0.00 4.49
6184 7818 1.147817 AGGTTCCAGTCATTTGGCCTT 59.852 47.619 3.32 0.00 38.16 4.35
6211 7848 6.152661 TCAATTATGTTTGGATCTGGTTGGTC 59.847 38.462 0.00 0.00 0.00 4.02
6292 7930 0.104671 GCTGGTTTCTTGCCTTGCAA 59.895 50.000 0.00 0.00 46.80 4.08
6306 7946 0.036294 GCTACTTTTCTCCCGCTGGT 60.036 55.000 0.00 0.00 0.00 4.00
6310 7950 1.732809 GAACTGCTACTTTTCTCCCGC 59.267 52.381 0.00 0.00 0.00 6.13
6317 7957 3.244561 TGGCTAGCTGAACTGCTACTTTT 60.245 43.478 15.72 0.00 43.74 2.27
6350 7990 1.303317 GGGTGGAGGCGTGATGTTT 60.303 57.895 0.00 0.00 0.00 2.83
6354 7994 2.224159 ACAAGGGTGGAGGCGTGAT 61.224 57.895 0.00 0.00 0.00 3.06
6377 8017 6.256321 GCGAATAAAAAGTGAAGTATACGGGA 59.744 38.462 0.00 0.00 0.00 5.14
6412 8052 1.188863 GTGCTGATGCTGGGGAAAAT 58.811 50.000 0.00 0.00 40.48 1.82
6415 8055 0.040058 AATGTGCTGATGCTGGGGAA 59.960 50.000 0.00 0.00 40.48 3.97
6416 8056 0.040058 AAATGTGCTGATGCTGGGGA 59.960 50.000 0.00 0.00 40.48 4.81
6439 8079 3.145286 TGTCGGTCAAAATTGCATCTCA 58.855 40.909 0.00 0.00 0.00 3.27
6475 8115 3.989817 GACTTTGAATTGATGGTGTTGCC 59.010 43.478 0.00 0.00 37.90 4.52
6476 8116 3.670055 CGACTTTGAATTGATGGTGTTGC 59.330 43.478 0.00 0.00 0.00 4.17
6477 8117 5.107109 TCGACTTTGAATTGATGGTGTTG 57.893 39.130 0.00 0.00 0.00 3.33
6478 8118 4.320494 GCTCGACTTTGAATTGATGGTGTT 60.320 41.667 0.00 0.00 0.00 3.32
6479 8119 3.189287 GCTCGACTTTGAATTGATGGTGT 59.811 43.478 0.00 0.00 0.00 4.16
6480 8120 3.189080 TGCTCGACTTTGAATTGATGGTG 59.811 43.478 0.00 0.00 0.00 4.17
6481 8121 3.189287 GTGCTCGACTTTGAATTGATGGT 59.811 43.478 0.00 0.00 0.00 3.55
6482 8122 3.725895 CGTGCTCGACTTTGAATTGATGG 60.726 47.826 1.00 0.00 39.71 3.51
6483 8123 3.123453 TCGTGCTCGACTTTGAATTGATG 59.877 43.478 6.80 0.00 41.35 3.07
6484 8124 3.325870 TCGTGCTCGACTTTGAATTGAT 58.674 40.909 6.80 0.00 41.35 2.57
6485 8125 2.731451 CTCGTGCTCGACTTTGAATTGA 59.269 45.455 6.80 0.00 41.35 2.57
6486 8126 2.476619 ACTCGTGCTCGACTTTGAATTG 59.523 45.455 6.80 0.00 41.35 2.32
6487 8127 2.755650 ACTCGTGCTCGACTTTGAATT 58.244 42.857 6.80 0.00 41.35 2.17
6488 8128 2.440539 ACTCGTGCTCGACTTTGAAT 57.559 45.000 6.80 0.00 41.35 2.57
6489 8129 2.351447 CCTACTCGTGCTCGACTTTGAA 60.351 50.000 6.80 0.00 41.35 2.69
6490 8130 1.199327 CCTACTCGTGCTCGACTTTGA 59.801 52.381 6.80 0.00 41.35 2.69
6491 8131 1.199327 TCCTACTCGTGCTCGACTTTG 59.801 52.381 6.80 0.09 41.35 2.77
6492 8132 1.469308 CTCCTACTCGTGCTCGACTTT 59.531 52.381 6.80 0.00 41.35 2.66
6493 8133 1.088306 CTCCTACTCGTGCTCGACTT 58.912 55.000 6.80 0.00 41.35 3.01
6494 8134 0.036199 ACTCCTACTCGTGCTCGACT 60.036 55.000 6.80 1.12 41.35 4.18
6495 8135 1.593933 CTACTCCTACTCGTGCTCGAC 59.406 57.143 6.80 0.00 41.35 4.20
6496 8136 1.937278 CTACTCCTACTCGTGCTCGA 58.063 55.000 10.80 10.80 44.12 4.04
6497 8137 0.305313 GCTACTCCTACTCGTGCTCG 59.695 60.000 0.81 0.81 38.55 5.03
6498 8138 0.664224 GGCTACTCCTACTCGTGCTC 59.336 60.000 0.00 0.00 0.00 4.26
6499 8139 0.034380 TGGCTACTCCTACTCGTGCT 60.034 55.000 0.00 0.00 35.26 4.40
6500 8140 0.100861 GTGGCTACTCCTACTCGTGC 59.899 60.000 0.00 0.00 35.26 5.34
6501 8141 1.132643 GTGTGGCTACTCCTACTCGTG 59.867 57.143 0.64 0.00 35.26 4.35
6502 8142 1.461559 GTGTGGCTACTCCTACTCGT 58.538 55.000 0.64 0.00 35.26 4.18
6503 8143 0.739561 GGTGTGGCTACTCCTACTCG 59.260 60.000 13.51 0.00 37.46 4.18
6504 8144 1.112950 GGGTGTGGCTACTCCTACTC 58.887 60.000 19.12 0.00 39.76 2.59
6505 8145 0.412244 TGGGTGTGGCTACTCCTACT 59.588 55.000 19.12 0.00 39.76 2.57
6506 8146 1.272807 TTGGGTGTGGCTACTCCTAC 58.727 55.000 19.12 6.04 39.76 3.18
6507 8147 2.263895 ATTGGGTGTGGCTACTCCTA 57.736 50.000 19.12 11.87 39.76 2.94
6508 8148 2.263895 TATTGGGTGTGGCTACTCCT 57.736 50.000 19.12 4.33 39.76 3.69
6509 8149 3.577805 ATTATTGGGTGTGGCTACTCC 57.422 47.619 12.50 12.50 39.25 3.85
6510 8150 4.642429 CCTATTATTGGGTGTGGCTACTC 58.358 47.826 0.64 0.00 0.00 2.59
6511 8151 3.181443 GCCTATTATTGGGTGTGGCTACT 60.181 47.826 0.64 0.00 36.32 2.57
6512 8152 3.146847 GCCTATTATTGGGTGTGGCTAC 58.853 50.000 0.00 0.00 36.32 3.58
6513 8153 2.780592 TGCCTATTATTGGGTGTGGCTA 59.219 45.455 0.00 0.00 39.57 3.93
6514 8154 1.568597 TGCCTATTATTGGGTGTGGCT 59.431 47.619 0.00 0.00 39.57 4.75
6515 8155 2.065899 TGCCTATTATTGGGTGTGGC 57.934 50.000 0.00 0.00 39.33 5.01
6516 8156 3.631250 AGTTGCCTATTATTGGGTGTGG 58.369 45.455 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.