Multiple sequence alignment - TraesCS4B01G087900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G087900 chr4B 100.000 3233 0 0 1 3233 88405034 88408266 0.000000e+00 5971
1 TraesCS4B01G087900 chr5A 98.436 2622 29 2 614 3233 328711033 328708422 0.000000e+00 4604
2 TraesCS4B01G087900 chr5A 97.001 2001 29 10 614 2613 675499470 675497500 0.000000e+00 3334
3 TraesCS4B01G087900 chr3B 98.168 2620 25 2 614 3233 349956235 349958831 0.000000e+00 4551
4 TraesCS4B01G087900 chr3B 98.015 2620 29 2 614 3233 331552514 331549918 0.000000e+00 4529
5 TraesCS4B01G087900 chr5B 97.585 2526 29 5 622 3145 336230142 336227647 0.000000e+00 4298
6 TraesCS4B01G087900 chr6B 98.078 1665 21 2 614 2277 698995446 698997100 0.000000e+00 2887
7 TraesCS4B01G087900 chrUn 99.421 1210 7 0 1936 3145 425319528 425318319 0.000000e+00 2196
8 TraesCS4B01G087900 chrUn 96.837 1328 12 3 614 1934 364763739 364765043 0.000000e+00 2193
9 TraesCS4B01G087900 chrUn 100.000 619 0 0 2615 3233 355109528 355108910 0.000000e+00 1144
10 TraesCS4B01G087900 chrUn 100.000 619 0 0 2615 3233 369515425 369514807 0.000000e+00 1144
11 TraesCS4B01G087900 chrUn 98.707 464 5 1 614 1077 283046320 283046782 0.000000e+00 822
12 TraesCS4B01G087900 chrUn 98.707 464 5 1 614 1077 287221671 287222133 0.000000e+00 822
13 TraesCS4B01G087900 chr5D 87.897 1702 107 37 614 2249 387823923 387822255 0.000000e+00 1910
14 TraesCS4B01G087900 chr6D 84.499 1987 132 71 607 2518 454277067 454278952 0.000000e+00 1801
15 TraesCS4B01G087900 chr1D 86.077 1063 76 25 614 1634 359696550 359697582 0.000000e+00 1077
16 TraesCS4B01G087900 chr1D 92.818 738 37 7 2510 3233 359698653 359699388 0.000000e+00 1055
17 TraesCS4B01G087900 chr3D 90.943 806 52 14 1451 2249 519328302 519329093 0.000000e+00 1064
18 TraesCS4B01G087900 chr2D 86.262 939 80 33 2256 3159 60176639 60177563 0.000000e+00 974
19 TraesCS4B01G087900 chr2A 89.142 746 41 15 2510 3233 773505478 773506205 0.000000e+00 893
20 TraesCS4B01G087900 chr2A 88.133 750 47 13 616 1328 698145026 698145770 0.000000e+00 854
21 TraesCS4B01G087900 chr2A 80.000 260 28 10 2260 2518 773505047 773505283 1.540000e-38 171
22 TraesCS4B01G087900 chr3A 86.515 749 66 15 614 1328 20561716 20562463 0.000000e+00 791
23 TraesCS4B01G087900 chr3A 90.496 484 41 2 614 1092 20568099 20567616 4.550000e-178 634
24 TraesCS4B01G087900 chr4A 94.828 174 8 1 3 176 537274342 537274514 1.480000e-68 270


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G087900 chr4B 88405034 88408266 3232 False 5971 5971 100.0000 1 3233 1 chr4B.!!$F1 3232
1 TraesCS4B01G087900 chr5A 328708422 328711033 2611 True 4604 4604 98.4360 614 3233 1 chr5A.!!$R1 2619
2 TraesCS4B01G087900 chr5A 675497500 675499470 1970 True 3334 3334 97.0010 614 2613 1 chr5A.!!$R2 1999
3 TraesCS4B01G087900 chr3B 349956235 349958831 2596 False 4551 4551 98.1680 614 3233 1 chr3B.!!$F1 2619
4 TraesCS4B01G087900 chr3B 331549918 331552514 2596 True 4529 4529 98.0150 614 3233 1 chr3B.!!$R1 2619
5 TraesCS4B01G087900 chr5B 336227647 336230142 2495 True 4298 4298 97.5850 622 3145 1 chr5B.!!$R1 2523
6 TraesCS4B01G087900 chr6B 698995446 698997100 1654 False 2887 2887 98.0780 614 2277 1 chr6B.!!$F1 1663
7 TraesCS4B01G087900 chrUn 425318319 425319528 1209 True 2196 2196 99.4210 1936 3145 1 chrUn.!!$R3 1209
8 TraesCS4B01G087900 chrUn 364763739 364765043 1304 False 2193 2193 96.8370 614 1934 1 chrUn.!!$F3 1320
9 TraesCS4B01G087900 chrUn 355108910 355109528 618 True 1144 1144 100.0000 2615 3233 1 chrUn.!!$R1 618
10 TraesCS4B01G087900 chrUn 369514807 369515425 618 True 1144 1144 100.0000 2615 3233 1 chrUn.!!$R2 618
11 TraesCS4B01G087900 chr5D 387822255 387823923 1668 True 1910 1910 87.8970 614 2249 1 chr5D.!!$R1 1635
12 TraesCS4B01G087900 chr6D 454277067 454278952 1885 False 1801 1801 84.4990 607 2518 1 chr6D.!!$F1 1911
13 TraesCS4B01G087900 chr1D 359696550 359699388 2838 False 1066 1077 89.4475 614 3233 2 chr1D.!!$F1 2619
14 TraesCS4B01G087900 chr3D 519328302 519329093 791 False 1064 1064 90.9430 1451 2249 1 chr3D.!!$F1 798
15 TraesCS4B01G087900 chr2D 60176639 60177563 924 False 974 974 86.2620 2256 3159 1 chr2D.!!$F1 903
16 TraesCS4B01G087900 chr2A 698145026 698145770 744 False 854 854 88.1330 616 1328 1 chr2A.!!$F1 712
17 TraesCS4B01G087900 chr2A 773505047 773506205 1158 False 532 893 84.5710 2260 3233 2 chr2A.!!$F2 973
18 TraesCS4B01G087900 chr3A 20561716 20562463 747 False 791 791 86.5150 614 1328 1 chr3A.!!$F1 714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
422 423 0.030908 CTCATCTTCCCCGTCGCTAC 59.969 60.0 0.00 0.0 0.00 3.58 F
516 517 0.031721 ACCGCGTCGAGAGAAAGTTT 59.968 50.0 4.92 0.0 45.01 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1898 2007 2.358737 GCTCCTTGTCACCCACCG 60.359 66.667 0.0 0.0 0.0 4.94 R
2342 2575 4.306600 CAAATTCACTTAACTTGGGGCAC 58.693 43.478 0.0 0.0 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.214758 CCCTACGATCGAACCTTTTGTTTT 59.785 41.667 24.34 0.00 37.29 2.43
24 25 5.409214 CCCTACGATCGAACCTTTTGTTTTA 59.591 40.000 24.34 0.00 37.29 1.52
25 26 6.073112 CCCTACGATCGAACCTTTTGTTTTAA 60.073 38.462 24.34 0.00 37.29 1.52
27 28 8.019094 CCTACGATCGAACCTTTTGTTTTAAAT 58.981 33.333 24.34 0.00 37.29 1.40
29 30 8.718047 ACGATCGAACCTTTTGTTTTAAATAC 57.282 30.769 24.34 0.00 37.29 1.89
30 31 8.344098 ACGATCGAACCTTTTGTTTTAAATACA 58.656 29.630 24.34 0.00 37.29 2.29
31 32 8.624028 CGATCGAACCTTTTGTTTTAAATACAC 58.376 33.333 10.26 0.00 37.29 2.90
43 44 9.926751 TTGTTTTAAATACACATTTCGTTCGTA 57.073 25.926 0.00 0.00 35.88 3.43
60 61 6.898451 GTTCGTAACGCAATTTTCATACAA 57.102 33.333 0.00 0.00 0.00 2.41
61 62 7.310361 GTTCGTAACGCAATTTTCATACAAA 57.690 32.000 0.00 0.00 0.00 2.83
62 63 7.765958 GTTCGTAACGCAATTTTCATACAAAA 58.234 30.769 0.00 0.00 0.00 2.44
63 64 8.421701 GTTCGTAACGCAATTTTCATACAAAAT 58.578 29.630 0.00 0.00 0.00 1.82
64 65 8.508800 TCGTAACGCAATTTTCATACAAAATT 57.491 26.923 0.20 0.20 39.60 1.82
65 66 8.631695 TCGTAACGCAATTTTCATACAAAATTC 58.368 29.630 2.71 0.00 37.64 2.17
66 67 7.621567 CGTAACGCAATTTTCATACAAAATTCG 59.378 33.333 15.17 15.17 37.64 3.34
67 68 7.630470 AACGCAATTTTCATACAAAATTCGA 57.370 28.000 19.46 0.00 37.64 3.71
68 69 7.630470 ACGCAATTTTCATACAAAATTCGAA 57.370 28.000 19.46 0.00 37.64 3.71
69 70 7.719538 ACGCAATTTTCATACAAAATTCGAAG 58.280 30.769 19.46 0.00 37.64 3.79
70 71 6.674090 CGCAATTTTCATACAAAATTCGAAGC 59.326 34.615 3.35 8.95 37.64 3.86
71 72 7.508965 GCAATTTTCATACAAAATTCGAAGCA 58.491 30.769 3.35 0.00 37.64 3.91
72 73 8.170553 GCAATTTTCATACAAAATTCGAAGCAT 58.829 29.630 3.35 0.00 37.64 3.79
73 74 9.679596 CAATTTTCATACAAAATTCGAAGCATC 57.320 29.630 3.35 0.00 37.64 3.91
74 75 9.643693 AATTTTCATACAAAATTCGAAGCATCT 57.356 25.926 3.35 0.00 35.59 2.90
75 76 9.643693 ATTTTCATACAAAATTCGAAGCATCTT 57.356 25.926 3.35 0.00 0.00 2.40
76 77 9.474920 TTTTCATACAAAATTCGAAGCATCTTT 57.525 25.926 3.35 0.00 0.00 2.52
89 90 7.784176 TCGAAGCATCTTTATAAGTATTTCGC 58.216 34.615 11.01 0.00 33.66 4.70
90 91 7.436970 TCGAAGCATCTTTATAAGTATTTCGCA 59.563 33.333 11.01 3.12 33.66 5.10
91 92 8.061857 CGAAGCATCTTTATAAGTATTTCGCAA 58.938 33.333 0.00 0.00 0.00 4.85
92 93 9.716507 GAAGCATCTTTATAAGTATTTCGCAAA 57.283 29.630 0.00 0.00 0.00 3.68
93 94 9.722056 AAGCATCTTTATAAGTATTTCGCAAAG 57.278 29.630 0.00 0.00 0.00 2.77
94 95 7.857885 AGCATCTTTATAAGTATTTCGCAAAGC 59.142 33.333 0.00 0.00 0.00 3.51
95 96 7.643764 GCATCTTTATAAGTATTTCGCAAAGCA 59.356 33.333 0.00 0.00 0.00 3.91
96 97 9.502145 CATCTTTATAAGTATTTCGCAAAGCAA 57.498 29.630 0.00 0.00 0.00 3.91
97 98 8.889849 TCTTTATAAGTATTTCGCAAAGCAAC 57.110 30.769 0.00 0.00 0.00 4.17
98 99 8.508062 TCTTTATAAGTATTTCGCAAAGCAACA 58.492 29.630 0.00 0.00 0.00 3.33
99 100 8.667987 TTTATAAGTATTTCGCAAAGCAACAG 57.332 30.769 0.00 0.00 0.00 3.16
100 101 2.933769 AGTATTTCGCAAAGCAACAGC 58.066 42.857 0.00 0.00 0.00 4.40
101 102 1.985684 GTATTTCGCAAAGCAACAGCC 59.014 47.619 0.00 0.00 0.00 4.85
102 103 0.664166 ATTTCGCAAAGCAACAGCCG 60.664 50.000 0.00 0.00 0.00 5.52
103 104 1.719725 TTTCGCAAAGCAACAGCCGA 61.720 50.000 0.00 0.00 0.00 5.54
104 105 2.116736 TTCGCAAAGCAACAGCCGAG 62.117 55.000 0.00 0.00 0.00 4.63
105 106 2.429739 GCAAAGCAACAGCCGAGC 60.430 61.111 0.00 0.00 0.00 5.03
106 107 3.033184 CAAAGCAACAGCCGAGCA 58.967 55.556 0.00 0.00 0.00 4.26
107 108 1.359833 CAAAGCAACAGCCGAGCAA 59.640 52.632 0.00 0.00 0.00 3.91
108 109 0.248990 CAAAGCAACAGCCGAGCAAA 60.249 50.000 0.00 0.00 0.00 3.68
109 110 0.459489 AAAGCAACAGCCGAGCAAAA 59.541 45.000 0.00 0.00 0.00 2.44
110 111 0.249031 AAGCAACAGCCGAGCAAAAC 60.249 50.000 0.00 0.00 0.00 2.43
111 112 1.661509 GCAACAGCCGAGCAAAACC 60.662 57.895 0.00 0.00 0.00 3.27
112 113 1.007387 CAACAGCCGAGCAAAACCC 60.007 57.895 0.00 0.00 0.00 4.11
113 114 1.152756 AACAGCCGAGCAAAACCCT 60.153 52.632 0.00 0.00 0.00 4.34
114 115 1.455383 AACAGCCGAGCAAAACCCTG 61.455 55.000 0.00 0.00 0.00 4.45
115 116 2.282462 AGCCGAGCAAAACCCTGG 60.282 61.111 0.00 0.00 0.00 4.45
116 117 2.282180 GCCGAGCAAAACCCTGGA 60.282 61.111 0.00 0.00 0.00 3.86
117 118 2.626780 GCCGAGCAAAACCCTGGAC 61.627 63.158 0.00 0.00 0.00 4.02
118 119 1.971695 CCGAGCAAAACCCTGGACC 60.972 63.158 0.00 0.00 0.00 4.46
119 120 1.228124 CGAGCAAAACCCTGGACCA 60.228 57.895 0.00 0.00 0.00 4.02
120 121 1.515521 CGAGCAAAACCCTGGACCAC 61.516 60.000 0.00 0.00 0.00 4.16
121 122 1.515521 GAGCAAAACCCTGGACCACG 61.516 60.000 0.00 0.00 0.00 4.94
122 123 3.039134 CAAAACCCTGGACCACGC 58.961 61.111 0.00 0.00 0.00 5.34
123 124 2.593436 AAAACCCTGGACCACGCG 60.593 61.111 3.53 3.53 0.00 6.01
139 140 2.436646 CGCCAGCGTCCTCCATTT 60.437 61.111 3.35 0.00 34.35 2.32
140 141 2.040544 CGCCAGCGTCCTCCATTTT 61.041 57.895 3.35 0.00 34.35 1.82
141 142 1.803289 GCCAGCGTCCTCCATTTTC 59.197 57.895 0.00 0.00 0.00 2.29
142 143 1.657751 GCCAGCGTCCTCCATTTTCC 61.658 60.000 0.00 0.00 0.00 3.13
143 144 0.322456 CCAGCGTCCTCCATTTTCCA 60.322 55.000 0.00 0.00 0.00 3.53
144 145 1.683011 CCAGCGTCCTCCATTTTCCAT 60.683 52.381 0.00 0.00 0.00 3.41
145 146 1.672881 CAGCGTCCTCCATTTTCCATC 59.327 52.381 0.00 0.00 0.00 3.51
146 147 1.561542 AGCGTCCTCCATTTTCCATCT 59.438 47.619 0.00 0.00 0.00 2.90
147 148 2.771943 AGCGTCCTCCATTTTCCATCTA 59.228 45.455 0.00 0.00 0.00 1.98
148 149 2.872858 GCGTCCTCCATTTTCCATCTAC 59.127 50.000 0.00 0.00 0.00 2.59
149 150 3.123804 CGTCCTCCATTTTCCATCTACG 58.876 50.000 0.00 0.00 0.00 3.51
150 151 2.872858 GTCCTCCATTTTCCATCTACGC 59.127 50.000 0.00 0.00 0.00 4.42
151 152 2.158813 TCCTCCATTTTCCATCTACGCC 60.159 50.000 0.00 0.00 0.00 5.68
152 153 1.867233 CTCCATTTTCCATCTACGCCG 59.133 52.381 0.00 0.00 0.00 6.46
153 154 1.208535 TCCATTTTCCATCTACGCCGT 59.791 47.619 0.00 0.00 0.00 5.68
154 155 2.014128 CCATTTTCCATCTACGCCGTT 58.986 47.619 0.00 0.00 0.00 4.44
155 156 2.223249 CCATTTTCCATCTACGCCGTTG 60.223 50.000 0.00 0.00 0.00 4.10
156 157 2.172851 TTTTCCATCTACGCCGTTGT 57.827 45.000 0.00 0.00 0.00 3.32
157 158 3.316071 TTTTCCATCTACGCCGTTGTA 57.684 42.857 0.00 0.00 0.00 2.41
158 159 2.572191 TTCCATCTACGCCGTTGTAG 57.428 50.000 0.00 5.24 42.57 2.74
159 160 0.101759 TCCATCTACGCCGTTGTAGC 59.898 55.000 0.00 0.00 41.29 3.58
160 161 0.179121 CCATCTACGCCGTTGTAGCA 60.179 55.000 0.00 0.00 41.29 3.49
161 162 1.200483 CATCTACGCCGTTGTAGCAG 58.800 55.000 0.00 0.00 41.29 4.24
162 163 1.100510 ATCTACGCCGTTGTAGCAGA 58.899 50.000 0.00 0.00 41.29 4.26
163 164 1.100510 TCTACGCCGTTGTAGCAGAT 58.899 50.000 0.00 0.00 41.29 2.90
164 165 1.200483 CTACGCCGTTGTAGCAGATG 58.800 55.000 0.00 0.00 35.80 2.90
165 166 0.804544 TACGCCGTTGTAGCAGATGC 60.805 55.000 0.00 0.00 42.49 3.91
175 176 3.215245 GCAGATGCGAGAGGGAGT 58.785 61.111 0.00 0.00 0.00 3.85
176 177 1.227205 GCAGATGCGAGAGGGAGTG 60.227 63.158 0.00 0.00 0.00 3.51
177 178 1.954362 GCAGATGCGAGAGGGAGTGT 61.954 60.000 0.00 0.00 0.00 3.55
178 179 1.393603 CAGATGCGAGAGGGAGTGTA 58.606 55.000 0.00 0.00 0.00 2.90
179 180 1.336440 CAGATGCGAGAGGGAGTGTAG 59.664 57.143 0.00 0.00 0.00 2.74
180 181 1.064314 AGATGCGAGAGGGAGTGTAGT 60.064 52.381 0.00 0.00 0.00 2.73
181 182 1.751924 GATGCGAGAGGGAGTGTAGTT 59.248 52.381 0.00 0.00 0.00 2.24
182 183 1.629043 TGCGAGAGGGAGTGTAGTTT 58.371 50.000 0.00 0.00 0.00 2.66
183 184 1.968493 TGCGAGAGGGAGTGTAGTTTT 59.032 47.619 0.00 0.00 0.00 2.43
184 185 2.288825 TGCGAGAGGGAGTGTAGTTTTG 60.289 50.000 0.00 0.00 0.00 2.44
185 186 2.029290 GCGAGAGGGAGTGTAGTTTTGA 60.029 50.000 0.00 0.00 0.00 2.69
186 187 3.368531 GCGAGAGGGAGTGTAGTTTTGAT 60.369 47.826 0.00 0.00 0.00 2.57
187 188 4.822026 CGAGAGGGAGTGTAGTTTTGATT 58.178 43.478 0.00 0.00 0.00 2.57
188 189 5.238583 CGAGAGGGAGTGTAGTTTTGATTT 58.761 41.667 0.00 0.00 0.00 2.17
189 190 5.348997 CGAGAGGGAGTGTAGTTTTGATTTC 59.651 44.000 0.00 0.00 0.00 2.17
190 191 6.187727 AGAGGGAGTGTAGTTTTGATTTCA 57.812 37.500 0.00 0.00 0.00 2.69
191 192 6.784031 AGAGGGAGTGTAGTTTTGATTTCAT 58.216 36.000 0.00 0.00 0.00 2.57
192 193 7.234355 AGAGGGAGTGTAGTTTTGATTTCATT 58.766 34.615 0.00 0.00 0.00 2.57
193 194 7.725844 AGAGGGAGTGTAGTTTTGATTTCATTT 59.274 33.333 0.00 0.00 0.00 2.32
194 195 8.934023 AGGGAGTGTAGTTTTGATTTCATTTA 57.066 30.769 0.00 0.00 0.00 1.40
195 196 9.362151 AGGGAGTGTAGTTTTGATTTCATTTAA 57.638 29.630 0.00 0.00 0.00 1.52
221 222 7.553881 TTTGTGCTATTAGAGTAATTCTGGC 57.446 36.000 0.00 0.00 36.61 4.85
222 223 6.233905 TGTGCTATTAGAGTAATTCTGGCA 57.766 37.500 0.00 0.00 36.61 4.92
223 224 6.649155 TGTGCTATTAGAGTAATTCTGGCAA 58.351 36.000 0.00 0.00 36.61 4.52
224 225 6.763135 TGTGCTATTAGAGTAATTCTGGCAAG 59.237 38.462 0.00 0.00 36.61 4.01
225 226 6.763610 GTGCTATTAGAGTAATTCTGGCAAGT 59.236 38.462 0.00 0.00 36.61 3.16
226 227 7.281100 GTGCTATTAGAGTAATTCTGGCAAGTT 59.719 37.037 0.00 0.00 36.61 2.66
227 228 7.829211 TGCTATTAGAGTAATTCTGGCAAGTTT 59.171 33.333 0.00 0.00 36.61 2.66
228 229 8.338986 GCTATTAGAGTAATTCTGGCAAGTTTC 58.661 37.037 0.00 0.00 36.61 2.78
229 230 7.631717 ATTAGAGTAATTCTGGCAAGTTTCC 57.368 36.000 0.00 0.00 36.61 3.13
230 231 4.985538 AGAGTAATTCTGGCAAGTTTCCA 58.014 39.130 0.00 0.00 33.93 3.53
231 232 5.574188 AGAGTAATTCTGGCAAGTTTCCAT 58.426 37.500 0.00 0.00 33.93 3.41
232 233 6.721318 AGAGTAATTCTGGCAAGTTTCCATA 58.279 36.000 0.00 0.00 33.93 2.74
233 234 7.175104 AGAGTAATTCTGGCAAGTTTCCATAA 58.825 34.615 0.00 0.00 33.93 1.90
234 235 7.337942 AGAGTAATTCTGGCAAGTTTCCATAAG 59.662 37.037 0.00 0.00 33.93 1.73
235 236 6.948309 AGTAATTCTGGCAAGTTTCCATAAGT 59.052 34.615 0.00 0.00 32.37 2.24
236 237 8.107095 AGTAATTCTGGCAAGTTTCCATAAGTA 58.893 33.333 0.00 0.00 32.37 2.24
237 238 6.759497 ATTCTGGCAAGTTTCCATAAGTAC 57.241 37.500 0.00 0.00 32.37 2.73
238 239 4.585879 TCTGGCAAGTTTCCATAAGTACC 58.414 43.478 0.00 0.00 32.37 3.34
239 240 3.340034 TGGCAAGTTTCCATAAGTACCG 58.660 45.455 0.00 0.00 0.00 4.02
240 241 3.008157 TGGCAAGTTTCCATAAGTACCGA 59.992 43.478 0.00 0.00 0.00 4.69
241 242 4.004982 GGCAAGTTTCCATAAGTACCGAA 58.995 43.478 0.00 0.00 0.00 4.30
242 243 4.638865 GGCAAGTTTCCATAAGTACCGAAT 59.361 41.667 0.00 0.00 0.00 3.34
243 244 5.124936 GGCAAGTTTCCATAAGTACCGAATT 59.875 40.000 0.00 0.00 0.00 2.17
244 245 6.255950 GCAAGTTTCCATAAGTACCGAATTC 58.744 40.000 0.00 0.00 0.00 2.17
245 246 6.677187 GCAAGTTTCCATAAGTACCGAATTCC 60.677 42.308 0.00 0.00 0.00 3.01
246 247 5.434408 AGTTTCCATAAGTACCGAATTCCC 58.566 41.667 0.00 0.00 0.00 3.97
247 248 5.045432 AGTTTCCATAAGTACCGAATTCCCA 60.045 40.000 0.00 0.00 0.00 4.37
248 249 5.640158 TTCCATAAGTACCGAATTCCCAT 57.360 39.130 0.00 0.00 0.00 4.00
249 250 6.750660 TTCCATAAGTACCGAATTCCCATA 57.249 37.500 0.00 0.00 0.00 2.74
250 251 6.750660 TCCATAAGTACCGAATTCCCATAA 57.249 37.500 0.00 0.00 0.00 1.90
251 252 7.324388 TCCATAAGTACCGAATTCCCATAAT 57.676 36.000 0.00 0.00 0.00 1.28
252 253 7.751646 TCCATAAGTACCGAATTCCCATAATT 58.248 34.615 0.00 0.00 0.00 1.40
253 254 8.882282 TCCATAAGTACCGAATTCCCATAATTA 58.118 33.333 0.00 1.05 0.00 1.40
254 255 8.943002 CCATAAGTACCGAATTCCCATAATTAC 58.057 37.037 0.00 0.00 0.00 1.89
255 256 9.720769 CATAAGTACCGAATTCCCATAATTACT 57.279 33.333 0.00 0.00 0.00 2.24
256 257 9.720769 ATAAGTACCGAATTCCCATAATTACTG 57.279 33.333 0.00 0.00 0.00 2.74
257 258 7.133133 AGTACCGAATTCCCATAATTACTGT 57.867 36.000 0.00 0.00 0.00 3.55
258 259 7.215085 AGTACCGAATTCCCATAATTACTGTC 58.785 38.462 0.00 0.00 0.00 3.51
259 260 5.374071 ACCGAATTCCCATAATTACTGTCC 58.626 41.667 0.00 0.00 0.00 4.02
260 261 4.451096 CCGAATTCCCATAATTACTGTCCG 59.549 45.833 0.00 0.00 0.00 4.79
261 262 4.451096 CGAATTCCCATAATTACTGTCCGG 59.549 45.833 0.00 0.00 0.00 5.14
262 263 5.374071 GAATTCCCATAATTACTGTCCGGT 58.626 41.667 0.00 0.00 0.00 5.28
263 264 4.847990 TTCCCATAATTACTGTCCGGTT 57.152 40.909 0.00 0.00 0.00 4.44
264 265 4.145365 TCCCATAATTACTGTCCGGTTG 57.855 45.455 0.00 0.00 0.00 3.77
265 266 3.118186 TCCCATAATTACTGTCCGGTTGG 60.118 47.826 0.00 0.00 0.00 3.77
266 267 2.616842 CCATAATTACTGTCCGGTTGGC 59.383 50.000 0.00 0.00 34.14 4.52
267 268 3.275143 CATAATTACTGTCCGGTTGGCA 58.725 45.455 0.00 0.00 34.14 4.92
268 269 2.507407 AATTACTGTCCGGTTGGCAT 57.493 45.000 0.00 0.00 34.14 4.40
269 270 2.507407 ATTACTGTCCGGTTGGCATT 57.493 45.000 0.00 0.00 34.14 3.56
270 271 2.279935 TTACTGTCCGGTTGGCATTT 57.720 45.000 0.00 0.00 34.14 2.32
271 272 1.529226 TACTGTCCGGTTGGCATTTG 58.471 50.000 0.00 0.00 34.14 2.32
272 273 0.179004 ACTGTCCGGTTGGCATTTGA 60.179 50.000 0.00 0.00 34.14 2.69
273 274 0.523072 CTGTCCGGTTGGCATTTGAG 59.477 55.000 0.00 0.00 34.14 3.02
274 275 0.109532 TGTCCGGTTGGCATTTGAGA 59.890 50.000 0.00 0.00 34.14 3.27
275 276 1.271871 TGTCCGGTTGGCATTTGAGAT 60.272 47.619 0.00 0.00 34.14 2.75
276 277 1.818674 GTCCGGTTGGCATTTGAGATT 59.181 47.619 0.00 0.00 34.14 2.40
277 278 2.091541 TCCGGTTGGCATTTGAGATTC 58.908 47.619 0.00 0.00 34.14 2.52
278 279 1.202177 CCGGTTGGCATTTGAGATTCG 60.202 52.381 0.00 0.00 0.00 3.34
279 280 1.737236 CGGTTGGCATTTGAGATTCGA 59.263 47.619 0.00 0.00 0.00 3.71
280 281 2.161410 CGGTTGGCATTTGAGATTCGAA 59.839 45.455 0.00 0.00 0.00 3.71
281 282 3.365868 CGGTTGGCATTTGAGATTCGAAA 60.366 43.478 0.00 0.00 0.00 3.46
282 283 4.555262 GGTTGGCATTTGAGATTCGAAAA 58.445 39.130 0.00 0.00 0.00 2.29
283 284 4.987912 GGTTGGCATTTGAGATTCGAAAAA 59.012 37.500 0.00 0.00 0.00 1.94
284 285 5.107491 GGTTGGCATTTGAGATTCGAAAAAC 60.107 40.000 0.00 0.00 0.00 2.43
285 286 5.193663 TGGCATTTGAGATTCGAAAAACA 57.806 34.783 0.00 0.00 0.00 2.83
286 287 5.221880 TGGCATTTGAGATTCGAAAAACAG 58.778 37.500 0.00 0.00 0.00 3.16
287 288 4.622740 GGCATTTGAGATTCGAAAAACAGG 59.377 41.667 0.00 0.00 0.00 4.00
288 289 5.222631 GCATTTGAGATTCGAAAAACAGGT 58.777 37.500 0.00 0.00 0.00 4.00
289 290 5.343325 GCATTTGAGATTCGAAAAACAGGTC 59.657 40.000 0.00 0.00 0.00 3.85
290 291 5.432885 TTTGAGATTCGAAAAACAGGTCC 57.567 39.130 0.00 0.00 0.00 4.46
291 292 4.079980 TGAGATTCGAAAAACAGGTCCA 57.920 40.909 0.00 0.00 0.00 4.02
292 293 4.065088 TGAGATTCGAAAAACAGGTCCAG 58.935 43.478 0.00 0.00 0.00 3.86
293 294 2.814336 AGATTCGAAAAACAGGTCCAGC 59.186 45.455 0.00 0.00 0.00 4.85
294 295 2.045561 TTCGAAAAACAGGTCCAGCA 57.954 45.000 0.00 0.00 0.00 4.41
295 296 2.045561 TCGAAAAACAGGTCCAGCAA 57.954 45.000 0.00 0.00 0.00 3.91
296 297 2.370349 TCGAAAAACAGGTCCAGCAAA 58.630 42.857 0.00 0.00 0.00 3.68
297 298 2.955660 TCGAAAAACAGGTCCAGCAAAT 59.044 40.909 0.00 0.00 0.00 2.32
298 299 3.383185 TCGAAAAACAGGTCCAGCAAATT 59.617 39.130 0.00 0.00 0.00 1.82
299 300 4.580995 TCGAAAAACAGGTCCAGCAAATTA 59.419 37.500 0.00 0.00 0.00 1.40
300 301 5.242838 TCGAAAAACAGGTCCAGCAAATTAT 59.757 36.000 0.00 0.00 0.00 1.28
301 302 5.345741 CGAAAAACAGGTCCAGCAAATTATG 59.654 40.000 0.00 0.00 0.00 1.90
302 303 5.806654 AAAACAGGTCCAGCAAATTATGT 57.193 34.783 0.00 0.00 0.00 2.29
303 304 4.789012 AACAGGTCCAGCAAATTATGTG 57.211 40.909 0.00 0.00 0.00 3.21
304 305 4.032960 ACAGGTCCAGCAAATTATGTGA 57.967 40.909 0.00 0.00 0.00 3.58
305 306 4.603131 ACAGGTCCAGCAAATTATGTGAT 58.397 39.130 0.00 0.00 0.00 3.06
306 307 5.018809 ACAGGTCCAGCAAATTATGTGATT 58.981 37.500 0.00 0.00 0.00 2.57
307 308 5.126061 ACAGGTCCAGCAAATTATGTGATTC 59.874 40.000 0.00 0.00 0.00 2.52
308 309 5.125900 CAGGTCCAGCAAATTATGTGATTCA 59.874 40.000 0.00 0.00 0.00 2.57
309 310 5.895534 AGGTCCAGCAAATTATGTGATTCAT 59.104 36.000 0.00 0.00 40.25 2.57
310 311 5.981315 GGTCCAGCAAATTATGTGATTCATG 59.019 40.000 0.00 0.00 37.91 3.07
311 312 5.461078 GTCCAGCAAATTATGTGATTCATGC 59.539 40.000 0.00 0.00 37.91 4.06
312 313 5.127356 TCCAGCAAATTATGTGATTCATGCA 59.873 36.000 8.41 0.00 37.91 3.96
313 314 5.813157 CCAGCAAATTATGTGATTCATGCAA 59.187 36.000 8.41 0.00 37.91 4.08
314 315 6.314152 CCAGCAAATTATGTGATTCATGCAAA 59.686 34.615 8.41 0.00 37.91 3.68
315 316 7.177407 CAGCAAATTATGTGATTCATGCAAAC 58.823 34.615 8.41 0.00 37.91 2.93
316 317 6.874664 AGCAAATTATGTGATTCATGCAAACA 59.125 30.769 8.41 0.00 37.91 2.83
317 318 6.957077 GCAAATTATGTGATTCATGCAAACAC 59.043 34.615 0.00 9.67 37.91 3.32
318 319 6.874297 AATTATGTGATTCATGCAAACACG 57.126 33.333 0.00 0.00 37.91 4.49
319 320 2.049077 TGTGATTCATGCAAACACGC 57.951 45.000 0.00 0.00 34.72 5.34
320 321 1.335780 TGTGATTCATGCAAACACGCC 60.336 47.619 0.00 0.00 34.72 5.68
321 322 0.243365 TGATTCATGCAAACACGCCC 59.757 50.000 0.00 0.00 0.00 6.13
322 323 0.243365 GATTCATGCAAACACGCCCA 59.757 50.000 0.00 0.00 0.00 5.36
323 324 0.896923 ATTCATGCAAACACGCCCAT 59.103 45.000 0.00 0.00 0.00 4.00
324 325 0.678395 TTCATGCAAACACGCCCATT 59.322 45.000 0.00 0.00 0.00 3.16
325 326 1.539157 TCATGCAAACACGCCCATTA 58.461 45.000 0.00 0.00 0.00 1.90
326 327 1.201181 TCATGCAAACACGCCCATTAC 59.799 47.619 0.00 0.00 0.00 1.89
327 328 0.170116 ATGCAAACACGCCCATTACG 59.830 50.000 0.00 0.00 0.00 3.18
328 329 1.154112 GCAAACACGCCCATTACGG 60.154 57.895 0.00 0.00 34.00 4.02
340 341 1.600485 CCATTACGGGTACAAATCGGC 59.400 52.381 0.00 0.00 0.00 5.54
341 342 1.600485 CATTACGGGTACAAATCGGCC 59.400 52.381 0.00 0.00 0.00 6.13
342 343 0.107752 TTACGGGTACAAATCGGCCC 60.108 55.000 0.00 0.00 37.79 5.80
343 344 1.263342 TACGGGTACAAATCGGCCCA 61.263 55.000 0.00 0.00 41.11 5.36
344 345 2.110352 CGGGTACAAATCGGCCCAC 61.110 63.158 0.00 0.00 41.11 4.61
345 346 1.301954 GGGTACAAATCGGCCCACT 59.698 57.895 0.00 0.00 40.76 4.00
346 347 1.029947 GGGTACAAATCGGCCCACTG 61.030 60.000 0.00 0.00 40.76 3.66
347 348 0.322187 GGTACAAATCGGCCCACTGT 60.322 55.000 0.00 0.00 0.00 3.55
348 349 1.530323 GTACAAATCGGCCCACTGTT 58.470 50.000 0.00 0.00 0.00 3.16
349 350 1.199097 GTACAAATCGGCCCACTGTTG 59.801 52.381 0.00 0.00 0.00 3.33
350 351 1.080569 CAAATCGGCCCACTGTTGC 60.081 57.895 0.00 0.00 0.00 4.17
351 352 1.228552 AAATCGGCCCACTGTTGCT 60.229 52.632 0.00 0.00 0.00 3.91
352 353 1.244019 AAATCGGCCCACTGTTGCTC 61.244 55.000 0.00 0.00 0.00 4.26
353 354 3.958147 ATCGGCCCACTGTTGCTCG 62.958 63.158 0.00 2.59 0.00 5.03
358 359 4.988598 CCACTGTTGCTCGGCGGT 62.989 66.667 7.21 0.00 0.00 5.68
359 360 3.716006 CACTGTTGCTCGGCGGTG 61.716 66.667 7.21 0.81 35.93 4.94
371 372 3.127533 GCGGTGCCACTCATCACC 61.128 66.667 0.00 1.54 46.95 4.02
373 374 2.756400 GGTGCCACTCATCACCCA 59.244 61.111 0.00 0.00 45.26 4.51
374 375 1.304282 GGTGCCACTCATCACCCAT 59.696 57.895 0.00 0.00 45.26 4.00
375 376 0.749454 GGTGCCACTCATCACCCATC 60.749 60.000 0.00 0.00 45.26 3.51
376 377 0.254178 GTGCCACTCATCACCCATCT 59.746 55.000 0.00 0.00 0.00 2.90
377 378 0.543277 TGCCACTCATCACCCATCTC 59.457 55.000 0.00 0.00 0.00 2.75
378 379 0.835941 GCCACTCATCACCCATCTCT 59.164 55.000 0.00 0.00 0.00 3.10
379 380 1.211457 GCCACTCATCACCCATCTCTT 59.789 52.381 0.00 0.00 0.00 2.85
380 381 2.744494 GCCACTCATCACCCATCTCTTC 60.744 54.545 0.00 0.00 0.00 2.87
381 382 2.158842 CCACTCATCACCCATCTCTTCC 60.159 54.545 0.00 0.00 0.00 3.46
382 383 2.770802 CACTCATCACCCATCTCTTCCT 59.229 50.000 0.00 0.00 0.00 3.36
383 384 3.199508 CACTCATCACCCATCTCTTCCTT 59.800 47.826 0.00 0.00 0.00 3.36
384 385 3.848975 ACTCATCACCCATCTCTTCCTTT 59.151 43.478 0.00 0.00 0.00 3.11
385 386 4.080638 ACTCATCACCCATCTCTTCCTTTC 60.081 45.833 0.00 0.00 0.00 2.62
386 387 3.118629 TCATCACCCATCTCTTCCTTTCG 60.119 47.826 0.00 0.00 0.00 3.46
387 388 1.066143 TCACCCATCTCTTCCTTTCGC 60.066 52.381 0.00 0.00 0.00 4.70
388 389 0.253327 ACCCATCTCTTCCTTTCGCC 59.747 55.000 0.00 0.00 0.00 5.54
389 390 0.253044 CCCATCTCTTCCTTTCGCCA 59.747 55.000 0.00 0.00 0.00 5.69
390 391 1.661341 CCATCTCTTCCTTTCGCCAG 58.339 55.000 0.00 0.00 0.00 4.85
391 392 1.012841 CATCTCTTCCTTTCGCCAGC 58.987 55.000 0.00 0.00 0.00 4.85
392 393 0.615331 ATCTCTTCCTTTCGCCAGCA 59.385 50.000 0.00 0.00 0.00 4.41
393 394 0.615331 TCTCTTCCTTTCGCCAGCAT 59.385 50.000 0.00 0.00 0.00 3.79
394 395 1.012841 CTCTTCCTTTCGCCAGCATC 58.987 55.000 0.00 0.00 0.00 3.91
395 396 0.324614 TCTTCCTTTCGCCAGCATCA 59.675 50.000 0.00 0.00 0.00 3.07
396 397 0.449388 CTTCCTTTCGCCAGCATCAC 59.551 55.000 0.00 0.00 0.00 3.06
397 398 0.036732 TTCCTTTCGCCAGCATCACT 59.963 50.000 0.00 0.00 0.00 3.41
398 399 0.391661 TCCTTTCGCCAGCATCACTC 60.392 55.000 0.00 0.00 0.00 3.51
399 400 1.372087 CCTTTCGCCAGCATCACTCC 61.372 60.000 0.00 0.00 0.00 3.85
400 401 0.392193 CTTTCGCCAGCATCACTCCT 60.392 55.000 0.00 0.00 0.00 3.69
401 402 0.036732 TTTCGCCAGCATCACTCCTT 59.963 50.000 0.00 0.00 0.00 3.36
402 403 0.391661 TTCGCCAGCATCACTCCTTC 60.392 55.000 0.00 0.00 0.00 3.46
403 404 1.817099 CGCCAGCATCACTCCTTCC 60.817 63.158 0.00 0.00 0.00 3.46
404 405 1.606531 GCCAGCATCACTCCTTCCT 59.393 57.895 0.00 0.00 0.00 3.36
405 406 0.463474 GCCAGCATCACTCCTTCCTC 60.463 60.000 0.00 0.00 0.00 3.71
406 407 0.907486 CCAGCATCACTCCTTCCTCA 59.093 55.000 0.00 0.00 0.00 3.86
407 408 1.489649 CCAGCATCACTCCTTCCTCAT 59.510 52.381 0.00 0.00 0.00 2.90
408 409 2.485124 CCAGCATCACTCCTTCCTCATC 60.485 54.545 0.00 0.00 0.00 2.92
409 410 2.435069 CAGCATCACTCCTTCCTCATCT 59.565 50.000 0.00 0.00 0.00 2.90
410 411 3.113824 AGCATCACTCCTTCCTCATCTT 58.886 45.455 0.00 0.00 0.00 2.40
411 412 3.134442 AGCATCACTCCTTCCTCATCTTC 59.866 47.826 0.00 0.00 0.00 2.87
412 413 3.743899 GCATCACTCCTTCCTCATCTTCC 60.744 52.174 0.00 0.00 0.00 3.46
413 414 2.472029 TCACTCCTTCCTCATCTTCCC 58.528 52.381 0.00 0.00 0.00 3.97
414 415 1.488393 CACTCCTTCCTCATCTTCCCC 59.512 57.143 0.00 0.00 0.00 4.81
415 416 0.755686 CTCCTTCCTCATCTTCCCCG 59.244 60.000 0.00 0.00 0.00 5.73
416 417 0.042731 TCCTTCCTCATCTTCCCCGT 59.957 55.000 0.00 0.00 0.00 5.28
417 418 0.466124 CCTTCCTCATCTTCCCCGTC 59.534 60.000 0.00 0.00 0.00 4.79
418 419 0.103208 CTTCCTCATCTTCCCCGTCG 59.897 60.000 0.00 0.00 0.00 5.12
419 420 1.956629 TTCCTCATCTTCCCCGTCGC 61.957 60.000 0.00 0.00 0.00 5.19
420 421 2.427245 CCTCATCTTCCCCGTCGCT 61.427 63.158 0.00 0.00 0.00 4.93
421 422 1.107538 CCTCATCTTCCCCGTCGCTA 61.108 60.000 0.00 0.00 0.00 4.26
422 423 0.030908 CTCATCTTCCCCGTCGCTAC 59.969 60.000 0.00 0.00 0.00 3.58
423 424 1.067582 CATCTTCCCCGTCGCTACC 59.932 63.158 0.00 0.00 0.00 3.18
424 425 1.380785 ATCTTCCCCGTCGCTACCA 60.381 57.895 0.00 0.00 0.00 3.25
425 426 1.673808 ATCTTCCCCGTCGCTACCAC 61.674 60.000 0.00 0.00 0.00 4.16
426 427 2.601067 TTCCCCGTCGCTACCACA 60.601 61.111 0.00 0.00 0.00 4.17
427 428 2.830704 CTTCCCCGTCGCTACCACAC 62.831 65.000 0.00 0.00 0.00 3.82
428 429 3.379445 CCCCGTCGCTACCACACT 61.379 66.667 0.00 0.00 0.00 3.55
429 430 2.181021 CCCGTCGCTACCACACTC 59.819 66.667 0.00 0.00 0.00 3.51
430 431 2.632544 CCCGTCGCTACCACACTCA 61.633 63.158 0.00 0.00 0.00 3.41
431 432 1.443872 CCGTCGCTACCACACTCAC 60.444 63.158 0.00 0.00 0.00 3.51
432 433 1.443872 CGTCGCTACCACACTCACC 60.444 63.158 0.00 0.00 0.00 4.02
433 434 1.080025 GTCGCTACCACACTCACCC 60.080 63.158 0.00 0.00 0.00 4.61
434 435 2.264794 CGCTACCACACTCACCCC 59.735 66.667 0.00 0.00 0.00 4.95
435 436 2.579657 CGCTACCACACTCACCCCA 61.580 63.158 0.00 0.00 0.00 4.96
436 437 1.003718 GCTACCACACTCACCCCAC 60.004 63.158 0.00 0.00 0.00 4.61
437 438 1.764571 GCTACCACACTCACCCCACA 61.765 60.000 0.00 0.00 0.00 4.17
438 439 0.984230 CTACCACACTCACCCCACAT 59.016 55.000 0.00 0.00 0.00 3.21
439 440 0.981183 TACCACACTCACCCCACATC 59.019 55.000 0.00 0.00 0.00 3.06
440 441 1.375908 CCACACTCACCCCACATCG 60.376 63.158 0.00 0.00 0.00 3.84
441 442 1.375908 CACACTCACCCCACATCGG 60.376 63.158 0.00 0.00 0.00 4.18
442 443 2.436646 CACTCACCCCACATCGGC 60.437 66.667 0.00 0.00 0.00 5.54
443 444 3.717294 ACTCACCCCACATCGGCC 61.717 66.667 0.00 0.00 0.00 6.13
444 445 3.716195 CTCACCCCACATCGGCCA 61.716 66.667 2.24 0.00 0.00 5.36
445 446 3.014538 TCACCCCACATCGGCCAT 61.015 61.111 2.24 0.00 0.00 4.40
446 447 2.829914 CACCCCACATCGGCCATG 60.830 66.667 2.24 8.60 38.64 3.66
448 449 2.516930 CCCCACATCGGCCATGTC 60.517 66.667 15.32 0.00 44.60 3.06
449 450 2.271821 CCCACATCGGCCATGTCA 59.728 61.111 15.32 0.00 44.60 3.58
450 451 2.114670 CCCACATCGGCCATGTCAC 61.115 63.158 15.32 0.00 44.60 3.67
451 452 1.377072 CCACATCGGCCATGTCACA 60.377 57.895 15.32 0.00 44.60 3.58
452 453 1.371337 CCACATCGGCCATGTCACAG 61.371 60.000 15.32 6.97 44.60 3.66
453 454 1.746615 ACATCGGCCATGTCACAGC 60.747 57.895 13.17 0.00 42.62 4.40
454 455 2.512286 ATCGGCCATGTCACAGCG 60.512 61.111 2.24 0.00 0.00 5.18
455 456 4.758251 TCGGCCATGTCACAGCGG 62.758 66.667 2.24 0.00 0.00 5.52
459 460 2.672651 CCATGTCACAGCGGCCAA 60.673 61.111 2.24 0.00 0.00 4.52
460 461 2.693762 CCATGTCACAGCGGCCAAG 61.694 63.158 2.24 0.00 0.00 3.61
461 462 3.058160 ATGTCACAGCGGCCAAGC 61.058 61.111 2.24 0.00 37.41 4.01
473 474 3.722295 CCAAGCCTTTCGCGCGAA 61.722 61.111 38.79 38.79 44.76 4.70
474 475 2.202222 CAAGCCTTTCGCGCGAAG 60.202 61.111 39.20 30.77 44.76 3.79
475 476 2.665185 AAGCCTTTCGCGCGAAGT 60.665 55.556 39.20 24.70 44.76 3.01
476 477 2.251642 AAGCCTTTCGCGCGAAGTT 61.252 52.632 39.20 28.13 44.76 2.66
477 478 1.782028 AAGCCTTTCGCGCGAAGTTT 61.782 50.000 39.20 29.90 44.76 2.66
478 479 1.370051 GCCTTTCGCGCGAAGTTTT 60.370 52.632 39.20 0.00 35.38 2.43
479 480 0.933047 GCCTTTCGCGCGAAGTTTTT 60.933 50.000 39.20 0.00 35.38 1.94
480 481 1.042475 CCTTTCGCGCGAAGTTTTTC 58.958 50.000 39.20 0.00 35.38 2.29
481 482 1.595976 CCTTTCGCGCGAAGTTTTTCA 60.596 47.619 39.20 24.73 35.38 2.69
482 483 2.105659 CTTTCGCGCGAAGTTTTTCAA 58.894 42.857 39.20 24.03 35.38 2.69
483 484 2.392933 TTCGCGCGAAGTTTTTCAAT 57.607 40.000 38.79 0.00 32.67 2.57
484 485 1.669184 TCGCGCGAAGTTTTTCAATG 58.331 45.000 32.97 0.00 32.67 2.82
485 486 1.261885 TCGCGCGAAGTTTTTCAATGA 59.738 42.857 32.97 1.01 32.67 2.57
486 487 1.638996 CGCGCGAAGTTTTTCAATGAG 59.361 47.619 28.94 0.00 32.67 2.90
487 488 2.661709 CGCGCGAAGTTTTTCAATGAGA 60.662 45.455 28.94 0.00 32.67 3.27
488 489 2.652172 GCGCGAAGTTTTTCAATGAGAC 59.348 45.455 12.10 0.00 32.67 3.36
489 490 3.848191 GCGCGAAGTTTTTCAATGAGACA 60.848 43.478 12.10 0.00 32.67 3.41
490 491 4.278858 CGCGAAGTTTTTCAATGAGACAA 58.721 39.130 0.00 0.00 32.67 3.18
491 492 4.732923 CGCGAAGTTTTTCAATGAGACAAA 59.267 37.500 0.00 0.00 32.67 2.83
492 493 5.229052 CGCGAAGTTTTTCAATGAGACAAAA 59.771 36.000 0.00 0.00 32.67 2.44
493 494 6.558433 CGCGAAGTTTTTCAATGAGACAAAAG 60.558 38.462 0.00 0.00 32.67 2.27
494 495 6.472163 GCGAAGTTTTTCAATGAGACAAAAGA 59.528 34.615 0.00 0.00 32.67 2.52
495 496 7.009174 GCGAAGTTTTTCAATGAGACAAAAGAA 59.991 33.333 0.00 0.00 32.67 2.52
496 497 8.526681 CGAAGTTTTTCAATGAGACAAAAGAAG 58.473 33.333 0.00 0.00 32.67 2.85
497 498 9.573133 GAAGTTTTTCAATGAGACAAAAGAAGA 57.427 29.630 0.00 0.00 33.38 2.87
498 499 8.917415 AGTTTTTCAATGAGACAAAAGAAGAC 57.083 30.769 0.00 0.00 28.45 3.01
499 500 7.976175 AGTTTTTCAATGAGACAAAAGAAGACC 59.024 33.333 0.00 0.00 28.45 3.85
500 501 5.673337 TTCAATGAGACAAAAGAAGACCG 57.327 39.130 0.00 0.00 0.00 4.79
501 502 3.498397 TCAATGAGACAAAAGAAGACCGC 59.502 43.478 0.00 0.00 0.00 5.68
502 503 1.497991 TGAGACAAAAGAAGACCGCG 58.502 50.000 0.00 0.00 0.00 6.46
503 504 1.202486 TGAGACAAAAGAAGACCGCGT 60.202 47.619 4.92 0.00 0.00 6.01
504 505 1.456165 GAGACAAAAGAAGACCGCGTC 59.544 52.381 4.92 2.66 0.00 5.19
505 506 0.161024 GACAAAAGAAGACCGCGTCG 59.839 55.000 4.92 0.00 37.67 5.12
506 507 0.249155 ACAAAAGAAGACCGCGTCGA 60.249 50.000 4.92 0.00 37.67 4.20
507 508 0.435008 CAAAAGAAGACCGCGTCGAG 59.565 55.000 4.92 0.00 37.67 4.04
508 509 0.313043 AAAAGAAGACCGCGTCGAGA 59.687 50.000 4.92 0.00 37.67 4.04
509 510 0.109689 AAAGAAGACCGCGTCGAGAG 60.110 55.000 4.92 0.00 37.67 3.20
510 511 0.954449 AAGAAGACCGCGTCGAGAGA 60.954 55.000 4.92 0.00 37.67 3.10
511 512 0.954449 AGAAGACCGCGTCGAGAGAA 60.954 55.000 4.92 0.00 45.01 2.87
512 513 0.109873 GAAGACCGCGTCGAGAGAAA 60.110 55.000 4.92 0.00 45.01 2.52
513 514 0.109689 AAGACCGCGTCGAGAGAAAG 60.110 55.000 4.92 0.00 45.01 2.62
514 515 1.209640 GACCGCGTCGAGAGAAAGT 59.790 57.895 4.92 0.00 45.01 2.66
515 516 0.386985 GACCGCGTCGAGAGAAAGTT 60.387 55.000 4.92 0.00 45.01 2.66
516 517 0.031721 ACCGCGTCGAGAGAAAGTTT 59.968 50.000 4.92 0.00 45.01 2.66
517 518 1.137513 CCGCGTCGAGAGAAAGTTTT 58.862 50.000 4.92 0.00 45.01 2.43
518 519 2.287788 ACCGCGTCGAGAGAAAGTTTTA 60.288 45.455 4.92 0.00 45.01 1.52
519 520 2.341760 CCGCGTCGAGAGAAAGTTTTAG 59.658 50.000 4.92 0.00 45.01 1.85
520 521 2.341760 CGCGTCGAGAGAAAGTTTTAGG 59.658 50.000 0.00 0.00 45.01 2.69
521 522 3.572584 GCGTCGAGAGAAAGTTTTAGGA 58.427 45.455 0.00 0.00 45.01 2.94
522 523 3.608939 GCGTCGAGAGAAAGTTTTAGGAG 59.391 47.826 0.00 0.00 45.01 3.69
523 524 4.615452 GCGTCGAGAGAAAGTTTTAGGAGA 60.615 45.833 0.00 0.00 45.01 3.71
524 525 5.090083 CGTCGAGAGAAAGTTTTAGGAGAG 58.910 45.833 0.00 0.00 45.01 3.20
525 526 5.404096 GTCGAGAGAAAGTTTTAGGAGAGG 58.596 45.833 0.00 0.00 45.01 3.69
526 527 5.183522 GTCGAGAGAAAGTTTTAGGAGAGGA 59.816 44.000 0.00 0.00 45.01 3.71
527 528 5.952947 TCGAGAGAAAGTTTTAGGAGAGGAT 59.047 40.000 0.00 0.00 37.03 3.24
528 529 6.039616 CGAGAGAAAGTTTTAGGAGAGGATG 58.960 44.000 0.00 0.00 0.00 3.51
529 530 6.350612 CGAGAGAAAGTTTTAGGAGAGGATGT 60.351 42.308 0.00 0.00 0.00 3.06
530 531 6.706295 AGAGAAAGTTTTAGGAGAGGATGTG 58.294 40.000 0.00 0.00 0.00 3.21
531 532 6.498651 AGAGAAAGTTTTAGGAGAGGATGTGA 59.501 38.462 0.00 0.00 0.00 3.58
532 533 7.016661 AGAGAAAGTTTTAGGAGAGGATGTGAA 59.983 37.037 0.00 0.00 0.00 3.18
533 534 7.518188 AGAAAGTTTTAGGAGAGGATGTGAAA 58.482 34.615 0.00 0.00 0.00 2.69
534 535 7.998964 AGAAAGTTTTAGGAGAGGATGTGAAAA 59.001 33.333 0.00 0.00 0.00 2.29
535 536 8.712228 AAAGTTTTAGGAGAGGATGTGAAAAT 57.288 30.769 0.00 0.00 0.00 1.82
536 537 7.693969 AGTTTTAGGAGAGGATGTGAAAATG 57.306 36.000 0.00 0.00 0.00 2.32
537 538 6.660949 AGTTTTAGGAGAGGATGTGAAAATGG 59.339 38.462 0.00 0.00 0.00 3.16
538 539 5.779241 TTAGGAGAGGATGTGAAAATGGT 57.221 39.130 0.00 0.00 0.00 3.55
539 540 4.664688 AGGAGAGGATGTGAAAATGGTT 57.335 40.909 0.00 0.00 0.00 3.67
540 541 5.003096 AGGAGAGGATGTGAAAATGGTTT 57.997 39.130 0.00 0.00 0.00 3.27
541 542 4.768968 AGGAGAGGATGTGAAAATGGTTTG 59.231 41.667 0.00 0.00 0.00 2.93
542 543 4.766891 GGAGAGGATGTGAAAATGGTTTGA 59.233 41.667 0.00 0.00 0.00 2.69
543 544 5.105997 GGAGAGGATGTGAAAATGGTTTGAG 60.106 44.000 0.00 0.00 0.00 3.02
544 545 5.388654 AGAGGATGTGAAAATGGTTTGAGT 58.611 37.500 0.00 0.00 0.00 3.41
545 546 5.242393 AGAGGATGTGAAAATGGTTTGAGTG 59.758 40.000 0.00 0.00 0.00 3.51
546 547 4.281688 AGGATGTGAAAATGGTTTGAGTGG 59.718 41.667 0.00 0.00 0.00 4.00
547 548 4.559153 GATGTGAAAATGGTTTGAGTGGG 58.441 43.478 0.00 0.00 0.00 4.61
548 549 3.370104 TGTGAAAATGGTTTGAGTGGGT 58.630 40.909 0.00 0.00 0.00 4.51
549 550 3.383185 TGTGAAAATGGTTTGAGTGGGTC 59.617 43.478 0.00 0.00 0.00 4.46
550 551 2.621055 TGAAAATGGTTTGAGTGGGTCG 59.379 45.455 0.00 0.00 0.00 4.79
551 552 2.649531 AAATGGTTTGAGTGGGTCGA 57.350 45.000 0.00 0.00 0.00 4.20
552 553 2.185004 AATGGTTTGAGTGGGTCGAG 57.815 50.000 0.00 0.00 0.00 4.04
553 554 1.348064 ATGGTTTGAGTGGGTCGAGA 58.652 50.000 0.00 0.00 0.00 4.04
554 555 1.124780 TGGTTTGAGTGGGTCGAGAA 58.875 50.000 0.00 0.00 0.00 2.87
555 556 1.070134 TGGTTTGAGTGGGTCGAGAAG 59.930 52.381 0.00 0.00 0.00 2.85
556 557 1.608283 GGTTTGAGTGGGTCGAGAAGG 60.608 57.143 0.00 0.00 0.00 3.46
557 558 1.343465 GTTTGAGTGGGTCGAGAAGGA 59.657 52.381 0.00 0.00 0.00 3.36
558 559 0.966920 TTGAGTGGGTCGAGAAGGAC 59.033 55.000 0.00 0.00 36.18 3.85
559 560 1.241990 TGAGTGGGTCGAGAAGGACG 61.242 60.000 0.00 0.00 37.82 4.79
560 561 2.126031 GTGGGTCGAGAAGGACGC 60.126 66.667 3.18 3.18 46.58 5.19
579 580 2.036098 CCCCACAAGGCTGCATCA 59.964 61.111 0.50 0.00 0.00 3.07
580 581 2.050350 CCCCACAAGGCTGCATCAG 61.050 63.158 0.50 0.00 34.12 2.90
598 599 3.698765 CCATTGGGCACAACTCCC 58.301 61.111 1.86 0.00 44.17 4.30
603 604 2.197324 GGGCACAACTCCCAACCA 59.803 61.111 0.00 0.00 43.37 3.67
604 605 2.200337 GGGCACAACTCCCAACCAC 61.200 63.158 0.00 0.00 43.37 4.16
605 606 2.200337 GGCACAACTCCCAACCACC 61.200 63.158 0.00 0.00 0.00 4.61
611 612 4.007659 CACAACTCCCAACCACCTATTAC 58.992 47.826 0.00 0.00 0.00 1.89
612 613 3.914435 ACAACTCCCAACCACCTATTACT 59.086 43.478 0.00 0.00 0.00 2.24
1305 1383 1.065126 AGGAGGTATCTTGCTTGTGCC 60.065 52.381 0.00 0.00 38.71 5.01
1851 1960 3.778954 AGGGTTGTGAAAGAGAAGGAG 57.221 47.619 0.00 0.00 0.00 3.69
1972 2081 5.729510 CTCTTTCTGACCTAAAGGAAGAGG 58.270 45.833 11.98 8.27 46.95 3.69
2203 2336 3.452627 GACCAAGAGCAAGATAAGGAGGA 59.547 47.826 0.00 0.00 0.00 3.71
2389 2622 9.102757 TGCAAGTTGTATTTCATTTGCTTTTAA 57.897 25.926 4.48 0.00 42.31 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.968675 ACAAAAGGTTCGATCGTAGGG 58.031 47.619 15.94 0.93 0.00 3.53
1 2 5.352643 AAAACAAAAGGTTCGATCGTAGG 57.647 39.130 15.94 0.44 39.29 3.18
2 3 8.944212 ATTTAAAACAAAAGGTTCGATCGTAG 57.056 30.769 15.94 0.00 39.29 3.51
3 4 9.810231 GTATTTAAAACAAAAGGTTCGATCGTA 57.190 29.630 15.94 1.77 39.29 3.43
5 6 8.624028 GTGTATTTAAAACAAAAGGTTCGATCG 58.376 33.333 9.36 9.36 39.29 3.69
6 7 9.453325 TGTGTATTTAAAACAAAAGGTTCGATC 57.547 29.630 0.00 0.00 39.29 3.69
7 8 9.974980 ATGTGTATTTAAAACAAAAGGTTCGAT 57.025 25.926 0.00 0.00 39.29 3.59
8 9 9.804758 AATGTGTATTTAAAACAAAAGGTTCGA 57.195 25.926 0.00 0.00 39.29 3.71
12 13 9.589111 ACGAAATGTGTATTTAAAACAAAAGGT 57.411 25.926 0.00 0.00 36.66 3.50
16 17 9.286946 ACGAACGAAATGTGTATTTAAAACAAA 57.713 25.926 0.14 0.00 36.66 2.83
18 19 9.926751 TTACGAACGAAATGTGTATTTAAAACA 57.073 25.926 0.14 0.00 36.66 2.83
37 38 6.898451 TTGTATGAAAATTGCGTTACGAAC 57.102 33.333 9.62 0.00 0.00 3.95
39 40 8.508800 AATTTTGTATGAAAATTGCGTTACGA 57.491 26.923 9.62 0.00 38.13 3.43
40 41 7.621567 CGAATTTTGTATGAAAATTGCGTTACG 59.378 33.333 12.33 0.00 39.23 3.18
41 42 8.631695 TCGAATTTTGTATGAAAATTGCGTTAC 58.368 29.630 12.33 0.95 39.23 2.50
43 44 7.630470 TCGAATTTTGTATGAAAATTGCGTT 57.370 28.000 12.33 0.00 39.23 4.84
45 46 6.674090 GCTTCGAATTTTGTATGAAAATTGCG 59.326 34.615 12.33 13.65 39.23 4.85
46 47 7.508965 TGCTTCGAATTTTGTATGAAAATTGC 58.491 30.769 12.33 10.37 39.23 3.56
47 48 9.679596 GATGCTTCGAATTTTGTATGAAAATTG 57.320 29.630 12.33 7.26 39.23 2.32
48 49 9.643693 AGATGCTTCGAATTTTGTATGAAAATT 57.356 25.926 0.00 8.84 41.11 1.82
49 50 9.643693 AAGATGCTTCGAATTTTGTATGAAAAT 57.356 25.926 0.00 0.00 0.00 1.82
50 51 9.474920 AAAGATGCTTCGAATTTTGTATGAAAA 57.525 25.926 0.00 0.00 0.00 2.29
63 64 8.273557 GCGAAATACTTATAAAGATGCTTCGAA 58.726 33.333 0.00 0.00 34.79 3.71
64 65 7.436970 TGCGAAATACTTATAAAGATGCTTCGA 59.563 33.333 13.69 0.00 34.79 3.71
65 66 7.564128 TGCGAAATACTTATAAAGATGCTTCG 58.436 34.615 0.00 0.00 35.33 3.79
66 67 9.716507 TTTGCGAAATACTTATAAAGATGCTTC 57.283 29.630 0.00 0.00 0.00 3.86
67 68 9.722056 CTTTGCGAAATACTTATAAAGATGCTT 57.278 29.630 0.00 0.00 0.00 3.91
68 69 7.857885 GCTTTGCGAAATACTTATAAAGATGCT 59.142 33.333 0.00 0.00 0.00 3.79
69 70 7.643764 TGCTTTGCGAAATACTTATAAAGATGC 59.356 33.333 0.00 0.00 0.00 3.91
70 71 9.502145 TTGCTTTGCGAAATACTTATAAAGATG 57.498 29.630 0.00 0.00 0.00 2.90
71 72 9.503427 GTTGCTTTGCGAAATACTTATAAAGAT 57.497 29.630 0.00 0.00 0.00 2.40
72 73 8.508062 TGTTGCTTTGCGAAATACTTATAAAGA 58.492 29.630 0.00 0.00 0.00 2.52
73 74 8.667987 TGTTGCTTTGCGAAATACTTATAAAG 57.332 30.769 0.00 0.00 0.00 1.85
74 75 7.272515 GCTGTTGCTTTGCGAAATACTTATAAA 59.727 33.333 0.00 0.00 36.03 1.40
75 76 6.745450 GCTGTTGCTTTGCGAAATACTTATAA 59.255 34.615 0.00 0.00 36.03 0.98
76 77 6.255215 GCTGTTGCTTTGCGAAATACTTATA 58.745 36.000 0.00 0.00 36.03 0.98
77 78 5.095490 GCTGTTGCTTTGCGAAATACTTAT 58.905 37.500 0.00 0.00 36.03 1.73
78 79 4.472286 GCTGTTGCTTTGCGAAATACTTA 58.528 39.130 0.00 0.00 36.03 2.24
79 80 3.308530 GCTGTTGCTTTGCGAAATACTT 58.691 40.909 0.00 0.00 36.03 2.24
80 81 2.351738 GGCTGTTGCTTTGCGAAATACT 60.352 45.455 0.00 0.00 39.59 2.12
81 82 1.985684 GGCTGTTGCTTTGCGAAATAC 59.014 47.619 0.00 0.00 39.59 1.89
82 83 1.400888 CGGCTGTTGCTTTGCGAAATA 60.401 47.619 0.00 0.00 39.59 1.40
83 84 0.664166 CGGCTGTTGCTTTGCGAAAT 60.664 50.000 0.00 0.00 39.59 2.17
84 85 1.299014 CGGCTGTTGCTTTGCGAAA 60.299 52.632 0.00 0.00 39.59 3.46
85 86 2.116736 CTCGGCTGTTGCTTTGCGAA 62.117 55.000 0.00 0.00 39.59 4.70
86 87 2.590291 TCGGCTGTTGCTTTGCGA 60.590 55.556 0.00 0.00 39.59 5.10
87 88 2.127118 CTCGGCTGTTGCTTTGCG 60.127 61.111 0.00 0.00 39.59 4.85
88 89 2.429739 GCTCGGCTGTTGCTTTGC 60.430 61.111 6.14 0.00 39.59 3.68
89 90 0.248990 TTTGCTCGGCTGTTGCTTTG 60.249 50.000 12.77 0.00 39.59 2.77
90 91 0.459489 TTTTGCTCGGCTGTTGCTTT 59.541 45.000 12.77 0.00 39.59 3.51
91 92 0.249031 GTTTTGCTCGGCTGTTGCTT 60.249 50.000 12.77 0.00 39.59 3.91
92 93 1.360192 GTTTTGCTCGGCTGTTGCT 59.640 52.632 12.77 0.00 39.59 3.91
93 94 1.661509 GGTTTTGCTCGGCTGTTGC 60.662 57.895 6.38 6.38 38.76 4.17
94 95 1.007387 GGGTTTTGCTCGGCTGTTG 60.007 57.895 0.00 0.00 0.00 3.33
95 96 1.152756 AGGGTTTTGCTCGGCTGTT 60.153 52.632 0.00 0.00 0.00 3.16
96 97 1.898574 CAGGGTTTTGCTCGGCTGT 60.899 57.895 0.00 0.00 0.00 4.40
97 98 2.629656 CCAGGGTTTTGCTCGGCTG 61.630 63.158 0.00 0.00 0.00 4.85
98 99 2.282462 CCAGGGTTTTGCTCGGCT 60.282 61.111 0.00 0.00 0.00 5.52
99 100 2.282180 TCCAGGGTTTTGCTCGGC 60.282 61.111 0.00 0.00 0.00 5.54
100 101 1.971695 GGTCCAGGGTTTTGCTCGG 60.972 63.158 0.00 0.00 0.00 4.63
101 102 1.228124 TGGTCCAGGGTTTTGCTCG 60.228 57.895 0.00 0.00 0.00 5.03
102 103 1.515521 CGTGGTCCAGGGTTTTGCTC 61.516 60.000 3.47 0.00 0.00 4.26
103 104 1.528309 CGTGGTCCAGGGTTTTGCT 60.528 57.895 3.47 0.00 0.00 3.91
104 105 3.039134 CGTGGTCCAGGGTTTTGC 58.961 61.111 3.47 0.00 0.00 3.68
105 106 2.903547 CGCGTGGTCCAGGGTTTTG 61.904 63.158 13.34 0.00 0.00 2.44
106 107 2.593436 CGCGTGGTCCAGGGTTTT 60.593 61.111 13.34 0.00 0.00 2.43
122 123 1.982073 GAAAATGGAGGACGCTGGCG 61.982 60.000 13.56 13.56 46.03 5.69
123 124 1.657751 GGAAAATGGAGGACGCTGGC 61.658 60.000 0.00 0.00 0.00 4.85
124 125 0.322456 TGGAAAATGGAGGACGCTGG 60.322 55.000 0.00 0.00 0.00 4.85
125 126 1.672881 GATGGAAAATGGAGGACGCTG 59.327 52.381 0.00 0.00 0.00 5.18
126 127 1.561542 AGATGGAAAATGGAGGACGCT 59.438 47.619 0.00 0.00 0.00 5.07
127 128 2.044123 AGATGGAAAATGGAGGACGC 57.956 50.000 0.00 0.00 0.00 5.19
128 129 3.123804 CGTAGATGGAAAATGGAGGACG 58.876 50.000 0.00 0.00 0.00 4.79
129 130 2.872858 GCGTAGATGGAAAATGGAGGAC 59.127 50.000 0.00 0.00 0.00 3.85
130 131 2.158813 GGCGTAGATGGAAAATGGAGGA 60.159 50.000 0.00 0.00 0.00 3.71
131 132 2.222027 GGCGTAGATGGAAAATGGAGG 58.778 52.381 0.00 0.00 0.00 4.30
132 133 1.867233 CGGCGTAGATGGAAAATGGAG 59.133 52.381 0.00 0.00 0.00 3.86
133 134 1.208535 ACGGCGTAGATGGAAAATGGA 59.791 47.619 12.58 0.00 0.00 3.41
134 135 1.663695 ACGGCGTAGATGGAAAATGG 58.336 50.000 12.58 0.00 0.00 3.16
135 136 2.418628 ACAACGGCGTAGATGGAAAATG 59.581 45.455 15.20 6.19 0.00 2.32
136 137 2.706890 ACAACGGCGTAGATGGAAAAT 58.293 42.857 15.20 0.00 0.00 1.82
137 138 2.172851 ACAACGGCGTAGATGGAAAA 57.827 45.000 15.20 0.00 0.00 2.29
138 139 2.883574 CTACAACGGCGTAGATGGAAA 58.116 47.619 15.20 0.00 41.21 3.13
139 140 1.470285 GCTACAACGGCGTAGATGGAA 60.470 52.381 15.20 0.02 41.21 3.53
140 141 0.101759 GCTACAACGGCGTAGATGGA 59.898 55.000 15.20 3.46 41.21 3.41
141 142 0.179121 TGCTACAACGGCGTAGATGG 60.179 55.000 15.20 4.95 41.21 3.51
142 143 1.200483 CTGCTACAACGGCGTAGATG 58.800 55.000 15.20 11.27 41.21 2.90
143 144 1.100510 TCTGCTACAACGGCGTAGAT 58.899 50.000 15.20 4.17 41.21 1.98
144 145 1.100510 ATCTGCTACAACGGCGTAGA 58.899 50.000 15.20 12.08 41.21 2.59
145 146 1.200483 CATCTGCTACAACGGCGTAG 58.800 55.000 15.20 8.70 41.56 3.51
146 147 0.804544 GCATCTGCTACAACGGCGTA 60.805 55.000 15.20 0.00 38.21 4.42
147 148 2.100631 GCATCTGCTACAACGGCGT 61.101 57.895 6.77 6.77 38.21 5.68
148 149 2.703409 GCATCTGCTACAACGGCG 59.297 61.111 4.80 4.80 38.21 6.46
149 150 1.756375 CTCGCATCTGCTACAACGGC 61.756 60.000 0.09 0.00 39.32 5.68
150 151 0.179137 TCTCGCATCTGCTACAACGG 60.179 55.000 0.09 0.00 39.32 4.44
151 152 1.195347 CTCTCGCATCTGCTACAACG 58.805 55.000 0.09 0.00 39.32 4.10
152 153 1.565305 CCTCTCGCATCTGCTACAAC 58.435 55.000 0.09 0.00 39.32 3.32
153 154 0.461548 CCCTCTCGCATCTGCTACAA 59.538 55.000 0.09 0.00 39.32 2.41
154 155 0.395724 TCCCTCTCGCATCTGCTACA 60.396 55.000 0.09 0.00 39.32 2.74
155 156 0.313672 CTCCCTCTCGCATCTGCTAC 59.686 60.000 0.09 0.00 39.32 3.58
156 157 0.106469 ACTCCCTCTCGCATCTGCTA 60.106 55.000 0.09 0.00 39.32 3.49
157 158 1.381056 ACTCCCTCTCGCATCTGCT 60.381 57.895 0.09 0.00 39.32 4.24
158 159 1.227205 CACTCCCTCTCGCATCTGC 60.227 63.158 0.00 0.00 37.78 4.26
159 160 1.336440 CTACACTCCCTCTCGCATCTG 59.664 57.143 0.00 0.00 0.00 2.90
160 161 1.064314 ACTACACTCCCTCTCGCATCT 60.064 52.381 0.00 0.00 0.00 2.90
161 162 1.394618 ACTACACTCCCTCTCGCATC 58.605 55.000 0.00 0.00 0.00 3.91
162 163 1.853963 AACTACACTCCCTCTCGCAT 58.146 50.000 0.00 0.00 0.00 4.73
163 164 1.629043 AAACTACACTCCCTCTCGCA 58.371 50.000 0.00 0.00 0.00 5.10
164 165 2.029290 TCAAAACTACACTCCCTCTCGC 60.029 50.000 0.00 0.00 0.00 5.03
165 166 3.936372 TCAAAACTACACTCCCTCTCG 57.064 47.619 0.00 0.00 0.00 4.04
166 167 6.231211 TGAAATCAAAACTACACTCCCTCTC 58.769 40.000 0.00 0.00 0.00 3.20
167 168 6.187727 TGAAATCAAAACTACACTCCCTCT 57.812 37.500 0.00 0.00 0.00 3.69
168 169 7.454260 AATGAAATCAAAACTACACTCCCTC 57.546 36.000 0.00 0.00 0.00 4.30
169 170 7.839680 AAATGAAATCAAAACTACACTCCCT 57.160 32.000 0.00 0.00 0.00 4.20
195 196 8.624776 GCCAGAATTACTCTAATAGCACAAAAT 58.375 33.333 0.00 0.00 31.12 1.82
196 197 7.609918 TGCCAGAATTACTCTAATAGCACAAAA 59.390 33.333 0.00 0.00 31.12 2.44
197 198 7.109501 TGCCAGAATTACTCTAATAGCACAAA 58.890 34.615 0.00 0.00 31.12 2.83
198 199 6.649155 TGCCAGAATTACTCTAATAGCACAA 58.351 36.000 0.00 0.00 31.12 3.33
199 200 6.233905 TGCCAGAATTACTCTAATAGCACA 57.766 37.500 0.00 0.00 31.12 4.57
200 201 6.763610 ACTTGCCAGAATTACTCTAATAGCAC 59.236 38.462 0.00 0.00 31.12 4.40
201 202 6.889198 ACTTGCCAGAATTACTCTAATAGCA 58.111 36.000 0.00 0.00 31.12 3.49
202 203 7.793927 AACTTGCCAGAATTACTCTAATAGC 57.206 36.000 0.00 0.00 31.12 2.97
203 204 8.831550 GGAAACTTGCCAGAATTACTCTAATAG 58.168 37.037 0.00 0.00 31.12 1.73
204 205 8.325787 TGGAAACTTGCCAGAATTACTCTAATA 58.674 33.333 0.00 0.00 31.12 0.98
205 206 7.175104 TGGAAACTTGCCAGAATTACTCTAAT 58.825 34.615 0.00 0.00 31.12 1.73
206 207 6.539173 TGGAAACTTGCCAGAATTACTCTAA 58.461 36.000 0.00 0.00 31.12 2.10
207 208 6.121776 TGGAAACTTGCCAGAATTACTCTA 57.878 37.500 0.00 0.00 31.12 2.43
208 209 4.985538 TGGAAACTTGCCAGAATTACTCT 58.014 39.130 0.00 0.00 33.23 3.24
209 210 5.904362 ATGGAAACTTGCCAGAATTACTC 57.096 39.130 0.00 0.00 39.11 2.59
210 211 6.948309 ACTTATGGAAACTTGCCAGAATTACT 59.052 34.615 0.00 0.00 39.11 2.24
211 212 7.158099 ACTTATGGAAACTTGCCAGAATTAC 57.842 36.000 0.00 0.00 39.11 1.89
212 213 7.338449 GGTACTTATGGAAACTTGCCAGAATTA 59.662 37.037 0.00 0.00 39.11 1.40
213 214 6.152831 GGTACTTATGGAAACTTGCCAGAATT 59.847 38.462 0.00 0.00 39.11 2.17
214 215 5.652452 GGTACTTATGGAAACTTGCCAGAAT 59.348 40.000 0.00 0.00 39.11 2.40
215 216 5.007682 GGTACTTATGGAAACTTGCCAGAA 58.992 41.667 0.00 0.00 39.11 3.02
216 217 4.585879 GGTACTTATGGAAACTTGCCAGA 58.414 43.478 0.00 0.00 39.11 3.86
217 218 3.374058 CGGTACTTATGGAAACTTGCCAG 59.626 47.826 0.00 0.00 39.11 4.85
218 219 3.008157 TCGGTACTTATGGAAACTTGCCA 59.992 43.478 0.00 0.00 40.24 4.92
219 220 3.602483 TCGGTACTTATGGAAACTTGCC 58.398 45.455 0.00 0.00 0.00 4.52
220 221 5.813080 ATTCGGTACTTATGGAAACTTGC 57.187 39.130 0.00 0.00 0.00 4.01
221 222 6.183360 GGGAATTCGGTACTTATGGAAACTTG 60.183 42.308 0.00 0.00 0.00 3.16
222 223 5.884232 GGGAATTCGGTACTTATGGAAACTT 59.116 40.000 0.00 0.00 0.00 2.66
223 224 5.045432 TGGGAATTCGGTACTTATGGAAACT 60.045 40.000 0.00 0.00 0.00 2.66
224 225 5.187687 TGGGAATTCGGTACTTATGGAAAC 58.812 41.667 0.00 0.00 0.00 2.78
225 226 5.438698 TGGGAATTCGGTACTTATGGAAA 57.561 39.130 0.00 0.00 0.00 3.13
226 227 5.640158 ATGGGAATTCGGTACTTATGGAA 57.360 39.130 0.00 0.00 0.00 3.53
227 228 6.750660 TTATGGGAATTCGGTACTTATGGA 57.249 37.500 0.00 0.00 0.00 3.41
228 229 7.996098 AATTATGGGAATTCGGTACTTATGG 57.004 36.000 0.00 0.00 0.00 2.74
229 230 9.720769 AGTAATTATGGGAATTCGGTACTTATG 57.279 33.333 0.00 0.00 0.00 1.90
230 231 9.720769 CAGTAATTATGGGAATTCGGTACTTAT 57.279 33.333 0.00 0.00 0.00 1.73
231 232 8.707449 ACAGTAATTATGGGAATTCGGTACTTA 58.293 33.333 0.00 0.00 0.00 2.24
232 233 7.571025 ACAGTAATTATGGGAATTCGGTACTT 58.429 34.615 0.00 0.00 0.00 2.24
233 234 7.133133 ACAGTAATTATGGGAATTCGGTACT 57.867 36.000 0.00 0.00 0.00 2.73
234 235 6.426025 GGACAGTAATTATGGGAATTCGGTAC 59.574 42.308 0.00 0.00 0.00 3.34
235 236 6.527423 GGACAGTAATTATGGGAATTCGGTA 58.473 40.000 0.00 0.00 0.00 4.02
236 237 5.374071 GGACAGTAATTATGGGAATTCGGT 58.626 41.667 0.00 0.00 0.00 4.69
237 238 4.451096 CGGACAGTAATTATGGGAATTCGG 59.549 45.833 0.00 0.00 0.00 4.30
238 239 4.451096 CCGGACAGTAATTATGGGAATTCG 59.549 45.833 0.00 0.00 0.00 3.34
239 240 5.374071 ACCGGACAGTAATTATGGGAATTC 58.626 41.667 9.46 0.00 0.00 2.17
240 241 5.382664 ACCGGACAGTAATTATGGGAATT 57.617 39.130 9.46 0.00 0.00 2.17
241 242 5.130350 CAACCGGACAGTAATTATGGGAAT 58.870 41.667 9.46 0.00 0.00 3.01
242 243 4.519213 CAACCGGACAGTAATTATGGGAA 58.481 43.478 9.46 0.00 0.00 3.97
243 244 3.118186 CCAACCGGACAGTAATTATGGGA 60.118 47.826 9.46 0.00 0.00 4.37
244 245 3.211045 CCAACCGGACAGTAATTATGGG 58.789 50.000 9.46 0.00 0.00 4.00
245 246 2.616842 GCCAACCGGACAGTAATTATGG 59.383 50.000 9.46 1.55 0.00 2.74
246 247 3.275143 TGCCAACCGGACAGTAATTATG 58.725 45.455 9.46 0.00 0.00 1.90
247 248 3.637911 TGCCAACCGGACAGTAATTAT 57.362 42.857 9.46 0.00 0.00 1.28
248 249 3.637911 ATGCCAACCGGACAGTAATTA 57.362 42.857 9.46 0.00 0.00 1.40
249 250 2.507407 ATGCCAACCGGACAGTAATT 57.493 45.000 9.46 0.00 0.00 1.40
250 251 2.491693 CAAATGCCAACCGGACAGTAAT 59.508 45.455 9.46 0.00 0.00 1.89
251 252 1.883275 CAAATGCCAACCGGACAGTAA 59.117 47.619 9.46 0.00 0.00 2.24
252 253 1.072489 TCAAATGCCAACCGGACAGTA 59.928 47.619 9.46 0.00 0.00 2.74
253 254 0.179004 TCAAATGCCAACCGGACAGT 60.179 50.000 9.46 0.00 0.00 3.55
254 255 0.523072 CTCAAATGCCAACCGGACAG 59.477 55.000 9.46 0.00 0.00 3.51
255 256 0.109532 TCTCAAATGCCAACCGGACA 59.890 50.000 9.46 0.14 0.00 4.02
256 257 1.463674 ATCTCAAATGCCAACCGGAC 58.536 50.000 9.46 0.00 0.00 4.79
257 258 2.091541 GAATCTCAAATGCCAACCGGA 58.908 47.619 9.46 0.00 0.00 5.14
258 259 1.202177 CGAATCTCAAATGCCAACCGG 60.202 52.381 0.00 0.00 0.00 5.28
259 260 1.737236 TCGAATCTCAAATGCCAACCG 59.263 47.619 0.00 0.00 0.00 4.44
260 261 3.848272 TTCGAATCTCAAATGCCAACC 57.152 42.857 0.00 0.00 0.00 3.77
261 262 5.461737 TGTTTTTCGAATCTCAAATGCCAAC 59.538 36.000 0.00 0.00 0.00 3.77
262 263 5.595885 TGTTTTTCGAATCTCAAATGCCAA 58.404 33.333 0.00 0.00 0.00 4.52
263 264 5.193663 TGTTTTTCGAATCTCAAATGCCA 57.806 34.783 0.00 0.00 0.00 4.92
264 265 4.622740 CCTGTTTTTCGAATCTCAAATGCC 59.377 41.667 0.00 0.00 0.00 4.40
265 266 5.222631 ACCTGTTTTTCGAATCTCAAATGC 58.777 37.500 0.00 0.00 0.00 3.56
266 267 5.858581 GGACCTGTTTTTCGAATCTCAAATG 59.141 40.000 0.00 0.00 0.00 2.32
267 268 5.534654 TGGACCTGTTTTTCGAATCTCAAAT 59.465 36.000 0.00 0.00 0.00 2.32
268 269 4.884744 TGGACCTGTTTTTCGAATCTCAAA 59.115 37.500 0.00 0.00 0.00 2.69
269 270 4.456535 TGGACCTGTTTTTCGAATCTCAA 58.543 39.130 0.00 0.00 0.00 3.02
270 271 4.065088 CTGGACCTGTTTTTCGAATCTCA 58.935 43.478 0.00 0.00 0.00 3.27
271 272 3.120165 GCTGGACCTGTTTTTCGAATCTC 60.120 47.826 0.00 0.00 0.00 2.75
272 273 2.814336 GCTGGACCTGTTTTTCGAATCT 59.186 45.455 0.00 0.00 0.00 2.40
273 274 2.552315 TGCTGGACCTGTTTTTCGAATC 59.448 45.455 0.00 0.00 0.00 2.52
274 275 2.582052 TGCTGGACCTGTTTTTCGAAT 58.418 42.857 0.00 0.00 0.00 3.34
275 276 2.045561 TGCTGGACCTGTTTTTCGAA 57.954 45.000 0.00 0.00 0.00 3.71
276 277 2.045561 TTGCTGGACCTGTTTTTCGA 57.954 45.000 0.00 0.00 0.00 3.71
277 278 2.861462 TTTGCTGGACCTGTTTTTCG 57.139 45.000 0.00 0.00 0.00 3.46
278 279 6.146021 CACATAATTTGCTGGACCTGTTTTTC 59.854 38.462 0.00 0.00 0.00 2.29
279 280 5.990996 CACATAATTTGCTGGACCTGTTTTT 59.009 36.000 0.00 0.00 0.00 1.94
280 281 5.304101 TCACATAATTTGCTGGACCTGTTTT 59.696 36.000 0.00 0.00 0.00 2.43
281 282 4.832266 TCACATAATTTGCTGGACCTGTTT 59.168 37.500 0.00 0.00 0.00 2.83
282 283 4.406456 TCACATAATTTGCTGGACCTGTT 58.594 39.130 0.00 0.00 0.00 3.16
283 284 4.032960 TCACATAATTTGCTGGACCTGT 57.967 40.909 0.00 0.00 0.00 4.00
284 285 5.125900 TGAATCACATAATTTGCTGGACCTG 59.874 40.000 0.00 0.00 0.00 4.00
285 286 5.263599 TGAATCACATAATTTGCTGGACCT 58.736 37.500 0.00 0.00 0.00 3.85
286 287 5.581126 TGAATCACATAATTTGCTGGACC 57.419 39.130 0.00 0.00 0.00 4.46
287 288 5.461078 GCATGAATCACATAATTTGCTGGAC 59.539 40.000 0.00 0.00 37.46 4.02
288 289 5.127356 TGCATGAATCACATAATTTGCTGGA 59.873 36.000 0.00 0.00 37.46 3.86
289 290 5.353111 TGCATGAATCACATAATTTGCTGG 58.647 37.500 0.00 0.00 37.46 4.85
290 291 6.895607 TTGCATGAATCACATAATTTGCTG 57.104 33.333 0.00 0.00 37.46 4.41
291 292 6.874664 TGTTTGCATGAATCACATAATTTGCT 59.125 30.769 0.00 0.00 37.46 3.91
292 293 6.957077 GTGTTTGCATGAATCACATAATTTGC 59.043 34.615 0.00 0.00 37.46 3.68
293 294 7.168138 CGTGTTTGCATGAATCACATAATTTG 58.832 34.615 0.00 0.00 37.46 2.32
294 295 6.183360 GCGTGTTTGCATGAATCACATAATTT 60.183 34.615 0.00 0.00 37.46 1.82
295 296 5.289193 GCGTGTTTGCATGAATCACATAATT 59.711 36.000 0.00 0.00 37.46 1.40
296 297 4.799949 GCGTGTTTGCATGAATCACATAAT 59.200 37.500 0.00 0.00 37.46 1.28
297 298 4.165036 GCGTGTTTGCATGAATCACATAA 58.835 39.130 0.00 0.00 37.46 1.90
298 299 3.427368 GGCGTGTTTGCATGAATCACATA 60.427 43.478 0.00 0.00 37.46 2.29
299 300 2.598589 GCGTGTTTGCATGAATCACAT 58.401 42.857 0.00 0.00 40.17 3.21
300 301 1.335780 GGCGTGTTTGCATGAATCACA 60.336 47.619 0.00 0.00 34.96 3.58
301 302 1.339711 GGCGTGTTTGCATGAATCAC 58.660 50.000 0.00 0.00 36.28 3.06
302 303 0.243365 GGGCGTGTTTGCATGAATCA 59.757 50.000 0.00 0.00 36.28 2.57
303 304 0.243365 TGGGCGTGTTTGCATGAATC 59.757 50.000 0.00 0.00 36.28 2.52
304 305 0.896923 ATGGGCGTGTTTGCATGAAT 59.103 45.000 0.00 0.00 36.28 2.57
305 306 0.678395 AATGGGCGTGTTTGCATGAA 59.322 45.000 0.00 0.00 36.28 2.57
306 307 1.201181 GTAATGGGCGTGTTTGCATGA 59.799 47.619 0.00 0.00 36.28 3.07
307 308 1.627879 GTAATGGGCGTGTTTGCATG 58.372 50.000 0.00 0.00 36.28 4.06
308 309 0.170116 CGTAATGGGCGTGTTTGCAT 59.830 50.000 0.00 0.00 36.28 3.96
309 310 1.576920 CGTAATGGGCGTGTTTGCA 59.423 52.632 0.00 0.00 36.28 4.08
310 311 1.154112 CCGTAATGGGCGTGTTTGC 60.154 57.895 0.00 0.00 0.00 3.68
320 321 1.600485 GCCGATTTGTACCCGTAATGG 59.400 52.381 0.00 0.00 37.55 3.16
321 322 1.600485 GGCCGATTTGTACCCGTAATG 59.400 52.381 0.00 0.00 0.00 1.90
322 323 1.475571 GGGCCGATTTGTACCCGTAAT 60.476 52.381 0.00 0.00 31.32 1.89
323 324 0.107752 GGGCCGATTTGTACCCGTAA 60.108 55.000 0.00 0.00 31.32 3.18
324 325 1.263342 TGGGCCGATTTGTACCCGTA 61.263 55.000 0.00 0.00 46.02 4.02
325 326 2.269883 GGGCCGATTTGTACCCGT 59.730 61.111 0.00 0.00 31.32 5.28
326 327 2.110352 GTGGGCCGATTTGTACCCG 61.110 63.158 0.00 0.00 46.02 5.28
327 328 1.029947 CAGTGGGCCGATTTGTACCC 61.030 60.000 0.00 0.00 43.14 3.69
328 329 0.322187 ACAGTGGGCCGATTTGTACC 60.322 55.000 0.00 0.00 0.00 3.34
329 330 1.199097 CAACAGTGGGCCGATTTGTAC 59.801 52.381 8.01 0.00 0.00 2.90
330 331 1.529226 CAACAGTGGGCCGATTTGTA 58.471 50.000 8.01 0.00 0.00 2.41
331 332 1.805428 GCAACAGTGGGCCGATTTGT 61.805 55.000 0.00 0.00 0.00 2.83
332 333 1.080569 GCAACAGTGGGCCGATTTG 60.081 57.895 0.00 0.60 0.00 2.32
333 334 1.228552 AGCAACAGTGGGCCGATTT 60.229 52.632 0.00 0.00 0.00 2.17
334 335 1.675641 GAGCAACAGTGGGCCGATT 60.676 57.895 0.00 0.00 0.00 3.34
335 336 2.045926 GAGCAACAGTGGGCCGAT 60.046 61.111 0.00 0.00 0.00 4.18
336 337 4.680237 CGAGCAACAGTGGGCCGA 62.680 66.667 0.00 0.00 0.00 5.54
341 342 4.988598 ACCGCCGAGCAACAGTGG 62.989 66.667 0.00 0.00 37.20 4.00
342 343 3.716006 CACCGCCGAGCAACAGTG 61.716 66.667 0.00 0.00 0.00 3.66
354 355 3.127533 GGTGATGAGTGGCACCGC 61.128 66.667 15.27 7.62 44.39 5.68
357 358 0.254178 AGATGGGTGATGAGTGGCAC 59.746 55.000 10.29 10.29 0.00 5.01
358 359 0.543277 GAGATGGGTGATGAGTGGCA 59.457 55.000 0.00 0.00 0.00 4.92
359 360 0.835941 AGAGATGGGTGATGAGTGGC 59.164 55.000 0.00 0.00 0.00 5.01
360 361 2.158842 GGAAGAGATGGGTGATGAGTGG 60.159 54.545 0.00 0.00 0.00 4.00
361 362 2.770802 AGGAAGAGATGGGTGATGAGTG 59.229 50.000 0.00 0.00 0.00 3.51
362 363 3.127791 AGGAAGAGATGGGTGATGAGT 57.872 47.619 0.00 0.00 0.00 3.41
363 364 4.450053 GAAAGGAAGAGATGGGTGATGAG 58.550 47.826 0.00 0.00 0.00 2.90
364 365 3.118629 CGAAAGGAAGAGATGGGTGATGA 60.119 47.826 0.00 0.00 0.00 2.92
365 366 3.201290 CGAAAGGAAGAGATGGGTGATG 58.799 50.000 0.00 0.00 0.00 3.07
366 367 2.420687 GCGAAAGGAAGAGATGGGTGAT 60.421 50.000 0.00 0.00 0.00 3.06
367 368 1.066143 GCGAAAGGAAGAGATGGGTGA 60.066 52.381 0.00 0.00 0.00 4.02
368 369 1.373570 GCGAAAGGAAGAGATGGGTG 58.626 55.000 0.00 0.00 0.00 4.61
369 370 0.253327 GGCGAAAGGAAGAGATGGGT 59.747 55.000 0.00 0.00 0.00 4.51
370 371 0.253044 TGGCGAAAGGAAGAGATGGG 59.747 55.000 0.00 0.00 0.00 4.00
371 372 1.661341 CTGGCGAAAGGAAGAGATGG 58.339 55.000 0.00 0.00 0.00 3.51
372 373 1.012841 GCTGGCGAAAGGAAGAGATG 58.987 55.000 0.00 0.00 0.00 2.90
373 374 0.615331 TGCTGGCGAAAGGAAGAGAT 59.385 50.000 0.00 0.00 0.00 2.75
374 375 0.615331 ATGCTGGCGAAAGGAAGAGA 59.385 50.000 0.00 0.00 0.00 3.10
375 376 1.012841 GATGCTGGCGAAAGGAAGAG 58.987 55.000 0.00 0.00 0.00 2.85
376 377 0.324614 TGATGCTGGCGAAAGGAAGA 59.675 50.000 0.00 0.00 0.00 2.87
377 378 0.449388 GTGATGCTGGCGAAAGGAAG 59.551 55.000 0.00 0.00 0.00 3.46
378 379 0.036732 AGTGATGCTGGCGAAAGGAA 59.963 50.000 0.00 0.00 0.00 3.36
379 380 0.391661 GAGTGATGCTGGCGAAAGGA 60.392 55.000 0.00 0.00 0.00 3.36
380 381 1.372087 GGAGTGATGCTGGCGAAAGG 61.372 60.000 0.00 0.00 0.00 3.11
381 382 0.392193 AGGAGTGATGCTGGCGAAAG 60.392 55.000 0.00 0.00 0.00 2.62
382 383 0.036732 AAGGAGTGATGCTGGCGAAA 59.963 50.000 0.00 0.00 0.00 3.46
383 384 0.391661 GAAGGAGTGATGCTGGCGAA 60.392 55.000 0.00 0.00 0.00 4.70
384 385 1.219124 GAAGGAGTGATGCTGGCGA 59.781 57.895 0.00 0.00 0.00 5.54
385 386 1.817099 GGAAGGAGTGATGCTGGCG 60.817 63.158 0.00 0.00 0.00 5.69
386 387 0.463474 GAGGAAGGAGTGATGCTGGC 60.463 60.000 0.00 0.00 0.00 4.85
387 388 0.907486 TGAGGAAGGAGTGATGCTGG 59.093 55.000 0.00 0.00 0.00 4.85
388 389 2.435069 AGATGAGGAAGGAGTGATGCTG 59.565 50.000 0.00 0.00 0.00 4.41
389 390 2.761809 AGATGAGGAAGGAGTGATGCT 58.238 47.619 0.00 0.00 0.00 3.79
390 391 3.465871 GAAGATGAGGAAGGAGTGATGC 58.534 50.000 0.00 0.00 0.00 3.91
391 392 3.181456 GGGAAGATGAGGAAGGAGTGATG 60.181 52.174 0.00 0.00 0.00 3.07
392 393 3.044894 GGGAAGATGAGGAAGGAGTGAT 58.955 50.000 0.00 0.00 0.00 3.06
393 394 2.472029 GGGAAGATGAGGAAGGAGTGA 58.528 52.381 0.00 0.00 0.00 3.41
394 395 1.488393 GGGGAAGATGAGGAAGGAGTG 59.512 57.143 0.00 0.00 0.00 3.51
395 396 1.886422 GGGGAAGATGAGGAAGGAGT 58.114 55.000 0.00 0.00 0.00 3.85
396 397 0.755686 CGGGGAAGATGAGGAAGGAG 59.244 60.000 0.00 0.00 0.00 3.69
397 398 0.042731 ACGGGGAAGATGAGGAAGGA 59.957 55.000 0.00 0.00 0.00 3.36
398 399 0.466124 GACGGGGAAGATGAGGAAGG 59.534 60.000 0.00 0.00 0.00 3.46
399 400 0.103208 CGACGGGGAAGATGAGGAAG 59.897 60.000 0.00 0.00 0.00 3.46
400 401 1.956629 GCGACGGGGAAGATGAGGAA 61.957 60.000 0.00 0.00 0.00 3.36
401 402 2.423898 GCGACGGGGAAGATGAGGA 61.424 63.158 0.00 0.00 0.00 3.71
402 403 1.107538 TAGCGACGGGGAAGATGAGG 61.108 60.000 0.00 0.00 0.00 3.86
403 404 0.030908 GTAGCGACGGGGAAGATGAG 59.969 60.000 0.00 0.00 0.00 2.90
404 405 1.389609 GGTAGCGACGGGGAAGATGA 61.390 60.000 0.00 0.00 0.00 2.92
405 406 1.067582 GGTAGCGACGGGGAAGATG 59.932 63.158 0.00 0.00 0.00 2.90
406 407 1.380785 TGGTAGCGACGGGGAAGAT 60.381 57.895 0.00 0.00 0.00 2.40
407 408 2.036098 TGGTAGCGACGGGGAAGA 59.964 61.111 0.00 0.00 0.00 2.87
408 409 2.183555 GTGGTAGCGACGGGGAAG 59.816 66.667 0.00 0.00 0.00 3.46
409 410 2.601067 TGTGGTAGCGACGGGGAA 60.601 61.111 0.00 0.00 0.00 3.97
410 411 3.376078 GTGTGGTAGCGACGGGGA 61.376 66.667 0.00 0.00 0.00 4.81
411 412 3.352338 GAGTGTGGTAGCGACGGGG 62.352 68.421 0.00 0.00 0.00 5.73
412 413 2.181021 GAGTGTGGTAGCGACGGG 59.819 66.667 0.00 0.00 0.00 5.28
413 414 1.443872 GTGAGTGTGGTAGCGACGG 60.444 63.158 0.00 0.00 0.00 4.79
414 415 1.443872 GGTGAGTGTGGTAGCGACG 60.444 63.158 0.00 0.00 0.00 5.12
415 416 1.080025 GGGTGAGTGTGGTAGCGAC 60.080 63.158 0.00 0.00 0.00 5.19
416 417 2.280552 GGGGTGAGTGTGGTAGCGA 61.281 63.158 0.00 0.00 0.00 4.93
417 418 2.264794 GGGGTGAGTGTGGTAGCG 59.735 66.667 0.00 0.00 0.00 4.26
418 419 1.003718 GTGGGGTGAGTGTGGTAGC 60.004 63.158 0.00 0.00 0.00 3.58
419 420 0.984230 ATGTGGGGTGAGTGTGGTAG 59.016 55.000 0.00 0.00 0.00 3.18
420 421 0.981183 GATGTGGGGTGAGTGTGGTA 59.019 55.000 0.00 0.00 0.00 3.25
421 422 1.761174 GATGTGGGGTGAGTGTGGT 59.239 57.895 0.00 0.00 0.00 4.16
422 423 1.375908 CGATGTGGGGTGAGTGTGG 60.376 63.158 0.00 0.00 0.00 4.17
423 424 1.375908 CCGATGTGGGGTGAGTGTG 60.376 63.158 0.00 0.00 0.00 3.82
424 425 3.068881 CCGATGTGGGGTGAGTGT 58.931 61.111 0.00 0.00 0.00 3.55
425 426 2.436646 GCCGATGTGGGGTGAGTG 60.437 66.667 0.00 0.00 38.63 3.51
426 427 3.717294 GGCCGATGTGGGGTGAGT 61.717 66.667 0.00 0.00 38.63 3.41
427 428 3.047807 ATGGCCGATGTGGGGTGAG 62.048 63.158 0.00 0.00 38.63 3.51
428 429 3.014538 ATGGCCGATGTGGGGTGA 61.015 61.111 0.00 0.00 38.63 4.02
429 430 2.829914 CATGGCCGATGTGGGGTG 60.830 66.667 0.00 0.00 38.63 4.61
430 431 3.338250 ACATGGCCGATGTGGGGT 61.338 61.111 16.85 0.00 44.12 4.95
431 432 2.516930 GACATGGCCGATGTGGGG 60.517 66.667 20.93 0.00 45.90 4.96
432 433 2.114670 GTGACATGGCCGATGTGGG 61.115 63.158 20.93 0.00 45.90 4.61
433 434 1.371337 CTGTGACATGGCCGATGTGG 61.371 60.000 20.93 8.32 45.90 4.17
434 435 1.985447 GCTGTGACATGGCCGATGTG 61.985 60.000 20.93 9.93 45.90 3.21
436 437 2.816360 CGCTGTGACATGGCCGATG 61.816 63.158 12.06 12.06 38.15 3.84
437 438 2.512286 CGCTGTGACATGGCCGAT 60.512 61.111 0.00 0.00 0.00 4.18
438 439 4.758251 CCGCTGTGACATGGCCGA 62.758 66.667 0.00 0.00 0.00 5.54
442 443 2.672651 TTGGCCGCTGTGACATGG 60.673 61.111 0.00 0.07 0.00 3.66
443 444 2.872557 CTTGGCCGCTGTGACATG 59.127 61.111 0.00 0.00 0.00 3.21
444 445 3.058160 GCTTGGCCGCTGTGACAT 61.058 61.111 0.00 0.00 0.00 3.06
456 457 3.651480 CTTCGCGCGAAAGGCTTGG 62.651 63.158 40.22 25.49 40.44 3.61
457 458 2.202222 CTTCGCGCGAAAGGCTTG 60.202 61.111 40.22 26.17 40.44 4.01
458 459 1.782028 AAACTTCGCGCGAAAGGCTT 61.782 50.000 40.22 27.49 40.44 4.35
459 460 1.782028 AAAACTTCGCGCGAAAGGCT 61.782 50.000 40.22 24.63 40.44 4.58
460 461 0.933047 AAAAACTTCGCGCGAAAGGC 60.933 50.000 40.22 0.00 33.34 4.35
461 462 1.042475 GAAAAACTTCGCGCGAAAGG 58.958 50.000 40.22 32.15 33.34 3.11
462 463 1.737249 TGAAAAACTTCGCGCGAAAG 58.263 45.000 40.22 33.38 33.34 2.62
463 464 2.175530 TTGAAAAACTTCGCGCGAAA 57.824 40.000 40.22 24.44 33.34 3.46
464 465 2.040524 CATTGAAAAACTTCGCGCGAA 58.959 42.857 39.11 39.11 0.00 4.70
465 466 1.261885 TCATTGAAAAACTTCGCGCGA 59.738 42.857 31.40 31.40 0.00 5.87
466 467 1.638996 CTCATTGAAAAACTTCGCGCG 59.361 47.619 26.76 26.76 0.00 6.86
467 468 2.652172 GTCTCATTGAAAAACTTCGCGC 59.348 45.455 0.00 0.00 0.00 6.86
468 469 3.872354 TGTCTCATTGAAAAACTTCGCG 58.128 40.909 0.00 0.00 0.00 5.87
469 470 6.472163 TCTTTTGTCTCATTGAAAAACTTCGC 59.528 34.615 0.00 0.00 32.04 4.70
470 471 7.969387 TCTTTTGTCTCATTGAAAAACTTCG 57.031 32.000 0.00 0.00 32.04 3.79
471 472 9.573133 TCTTCTTTTGTCTCATTGAAAAACTTC 57.427 29.630 0.00 0.00 32.04 3.01
472 473 9.358872 GTCTTCTTTTGTCTCATTGAAAAACTT 57.641 29.630 0.00 0.00 32.04 2.66
473 474 7.976175 GGTCTTCTTTTGTCTCATTGAAAAACT 59.024 33.333 0.00 0.00 32.04 2.66
474 475 7.044052 CGGTCTTCTTTTGTCTCATTGAAAAAC 60.044 37.037 0.00 0.00 32.04 2.43
475 476 6.972328 CGGTCTTCTTTTGTCTCATTGAAAAA 59.028 34.615 0.00 0.00 30.50 1.94
476 477 6.494842 CGGTCTTCTTTTGTCTCATTGAAAA 58.505 36.000 0.00 0.00 0.00 2.29
477 478 5.505654 GCGGTCTTCTTTTGTCTCATTGAAA 60.506 40.000 0.00 0.00 0.00 2.69
478 479 4.024048 GCGGTCTTCTTTTGTCTCATTGAA 60.024 41.667 0.00 0.00 0.00 2.69
479 480 3.498397 GCGGTCTTCTTTTGTCTCATTGA 59.502 43.478 0.00 0.00 0.00 2.57
480 481 3.665323 CGCGGTCTTCTTTTGTCTCATTG 60.665 47.826 0.00 0.00 0.00 2.82
481 482 2.480419 CGCGGTCTTCTTTTGTCTCATT 59.520 45.455 0.00 0.00 0.00 2.57
482 483 2.069273 CGCGGTCTTCTTTTGTCTCAT 58.931 47.619 0.00 0.00 0.00 2.90
483 484 1.202486 ACGCGGTCTTCTTTTGTCTCA 60.202 47.619 12.47 0.00 0.00 3.27
484 485 1.456165 GACGCGGTCTTCTTTTGTCTC 59.544 52.381 12.47 0.00 0.00 3.36
485 486 1.499049 GACGCGGTCTTCTTTTGTCT 58.501 50.000 12.47 0.00 0.00 3.41
486 487 0.161024 CGACGCGGTCTTCTTTTGTC 59.839 55.000 12.47 0.00 0.00 3.18
487 488 0.249155 TCGACGCGGTCTTCTTTTGT 60.249 50.000 12.47 0.00 0.00 2.83
488 489 0.435008 CTCGACGCGGTCTTCTTTTG 59.565 55.000 12.47 0.00 0.00 2.44
489 490 0.313043 TCTCGACGCGGTCTTCTTTT 59.687 50.000 12.47 0.00 0.00 2.27
490 491 0.109689 CTCTCGACGCGGTCTTCTTT 60.110 55.000 12.47 0.00 0.00 2.52
491 492 0.954449 TCTCTCGACGCGGTCTTCTT 60.954 55.000 12.47 0.00 0.00 2.52
492 493 0.954449 TTCTCTCGACGCGGTCTTCT 60.954 55.000 12.47 0.00 0.00 2.85
493 494 0.109873 TTTCTCTCGACGCGGTCTTC 60.110 55.000 12.47 0.00 0.00 2.87
494 495 0.109689 CTTTCTCTCGACGCGGTCTT 60.110 55.000 12.47 0.00 0.00 3.01
495 496 1.235948 ACTTTCTCTCGACGCGGTCT 61.236 55.000 12.47 0.00 0.00 3.85
496 497 0.386985 AACTTTCTCTCGACGCGGTC 60.387 55.000 12.47 4.73 0.00 4.79
497 498 0.031721 AAACTTTCTCTCGACGCGGT 59.968 50.000 12.47 0.00 0.00 5.68
498 499 1.137513 AAAACTTTCTCTCGACGCGG 58.862 50.000 12.47 0.00 0.00 6.46
499 500 2.341760 CCTAAAACTTTCTCTCGACGCG 59.658 50.000 3.53 3.53 0.00 6.01
500 501 3.572584 TCCTAAAACTTTCTCTCGACGC 58.427 45.455 0.00 0.00 0.00 5.19
501 502 5.044428 TCTCCTAAAACTTTCTCTCGACG 57.956 43.478 0.00 0.00 0.00 5.12
502 503 5.183522 TCCTCTCCTAAAACTTTCTCTCGAC 59.816 44.000 0.00 0.00 0.00 4.20
503 504 5.322754 TCCTCTCCTAAAACTTTCTCTCGA 58.677 41.667 0.00 0.00 0.00 4.04
504 505 5.646577 TCCTCTCCTAAAACTTTCTCTCG 57.353 43.478 0.00 0.00 0.00 4.04
505 506 6.816140 CACATCCTCTCCTAAAACTTTCTCTC 59.184 42.308 0.00 0.00 0.00 3.20
506 507 6.498651 TCACATCCTCTCCTAAAACTTTCTCT 59.501 38.462 0.00 0.00 0.00 3.10
507 508 6.702329 TCACATCCTCTCCTAAAACTTTCTC 58.298 40.000 0.00 0.00 0.00 2.87
508 509 6.688073 TCACATCCTCTCCTAAAACTTTCT 57.312 37.500 0.00 0.00 0.00 2.52
509 510 7.745620 TTTCACATCCTCTCCTAAAACTTTC 57.254 36.000 0.00 0.00 0.00 2.62
510 511 8.579863 CATTTTCACATCCTCTCCTAAAACTTT 58.420 33.333 0.00 0.00 0.00 2.66
511 512 7.177392 CCATTTTCACATCCTCTCCTAAAACTT 59.823 37.037 0.00 0.00 0.00 2.66
512 513 6.660949 CCATTTTCACATCCTCTCCTAAAACT 59.339 38.462 0.00 0.00 0.00 2.66
513 514 6.434340 ACCATTTTCACATCCTCTCCTAAAAC 59.566 38.462 0.00 0.00 0.00 2.43
514 515 6.552008 ACCATTTTCACATCCTCTCCTAAAA 58.448 36.000 0.00 0.00 0.00 1.52
515 516 6.139679 ACCATTTTCACATCCTCTCCTAAA 57.860 37.500 0.00 0.00 0.00 1.85
516 517 5.779241 ACCATTTTCACATCCTCTCCTAA 57.221 39.130 0.00 0.00 0.00 2.69
517 518 5.779241 AACCATTTTCACATCCTCTCCTA 57.221 39.130 0.00 0.00 0.00 2.94
518 519 4.664688 AACCATTTTCACATCCTCTCCT 57.335 40.909 0.00 0.00 0.00 3.69
519 520 4.766891 TCAAACCATTTTCACATCCTCTCC 59.233 41.667 0.00 0.00 0.00 3.71
520 521 5.474876 ACTCAAACCATTTTCACATCCTCTC 59.525 40.000 0.00 0.00 0.00 3.20
521 522 5.242393 CACTCAAACCATTTTCACATCCTCT 59.758 40.000 0.00 0.00 0.00 3.69
522 523 5.464168 CACTCAAACCATTTTCACATCCTC 58.536 41.667 0.00 0.00 0.00 3.71
523 524 4.281688 CCACTCAAACCATTTTCACATCCT 59.718 41.667 0.00 0.00 0.00 3.24
524 525 4.559153 CCACTCAAACCATTTTCACATCC 58.441 43.478 0.00 0.00 0.00 3.51
525 526 4.039124 ACCCACTCAAACCATTTTCACATC 59.961 41.667 0.00 0.00 0.00 3.06
526 527 3.966665 ACCCACTCAAACCATTTTCACAT 59.033 39.130 0.00 0.00 0.00 3.21
527 528 3.370104 ACCCACTCAAACCATTTTCACA 58.630 40.909 0.00 0.00 0.00 3.58
528 529 3.550030 CGACCCACTCAAACCATTTTCAC 60.550 47.826 0.00 0.00 0.00 3.18
529 530 2.621055 CGACCCACTCAAACCATTTTCA 59.379 45.455 0.00 0.00 0.00 2.69
530 531 2.882137 TCGACCCACTCAAACCATTTTC 59.118 45.455 0.00 0.00 0.00 2.29
531 532 2.884639 CTCGACCCACTCAAACCATTTT 59.115 45.455 0.00 0.00 0.00 1.82
532 533 2.105821 TCTCGACCCACTCAAACCATTT 59.894 45.455 0.00 0.00 0.00 2.32
533 534 1.697432 TCTCGACCCACTCAAACCATT 59.303 47.619 0.00 0.00 0.00 3.16
534 535 1.348064 TCTCGACCCACTCAAACCAT 58.652 50.000 0.00 0.00 0.00 3.55
535 536 1.070134 CTTCTCGACCCACTCAAACCA 59.930 52.381 0.00 0.00 0.00 3.67
536 537 1.608283 CCTTCTCGACCCACTCAAACC 60.608 57.143 0.00 0.00 0.00 3.27
537 538 1.343465 TCCTTCTCGACCCACTCAAAC 59.657 52.381 0.00 0.00 0.00 2.93
538 539 1.343465 GTCCTTCTCGACCCACTCAAA 59.657 52.381 0.00 0.00 0.00 2.69
539 540 0.966920 GTCCTTCTCGACCCACTCAA 59.033 55.000 0.00 0.00 0.00 3.02
540 541 1.241990 CGTCCTTCTCGACCCACTCA 61.242 60.000 0.00 0.00 0.00 3.41
541 542 1.507174 CGTCCTTCTCGACCCACTC 59.493 63.158 0.00 0.00 0.00 3.51
542 543 2.637383 GCGTCCTTCTCGACCCACT 61.637 63.158 0.00 0.00 0.00 4.00
543 544 2.126031 GCGTCCTTCTCGACCCAC 60.126 66.667 0.00 0.00 0.00 4.61
544 545 3.744719 CGCGTCCTTCTCGACCCA 61.745 66.667 0.00 0.00 0.00 4.51
562 563 2.036098 TGATGCAGCCTTGTGGGG 59.964 61.111 0.00 0.00 35.12 4.96
563 564 3.599584 CTGATGCAGCCTTGTGGG 58.400 61.111 0.00 0.00 38.36 4.61
581 582 3.698765 GGGAGTTGTGCCCAATGG 58.301 61.111 0.00 0.00 45.31 3.16
586 587 2.197324 TGGTTGGGAGTTGTGCCC 59.803 61.111 0.00 0.00 46.22 5.36
587 588 2.200337 GGTGGTTGGGAGTTGTGCC 61.200 63.158 0.00 0.00 33.79 5.01
588 589 0.109723 TAGGTGGTTGGGAGTTGTGC 59.890 55.000 0.00 0.00 0.00 4.57
589 590 2.879103 ATAGGTGGTTGGGAGTTGTG 57.121 50.000 0.00 0.00 0.00 3.33
590 591 3.914435 AGTAATAGGTGGTTGGGAGTTGT 59.086 43.478 0.00 0.00 0.00 3.32
591 592 4.569719 AGTAATAGGTGGTTGGGAGTTG 57.430 45.455 0.00 0.00 0.00 3.16
592 593 4.720273 CCTAGTAATAGGTGGTTGGGAGTT 59.280 45.833 8.13 0.00 32.60 3.01
593 594 4.296056 CCTAGTAATAGGTGGTTGGGAGT 58.704 47.826 8.13 0.00 32.60 3.85
594 595 4.957684 CCTAGTAATAGGTGGTTGGGAG 57.042 50.000 8.13 0.00 32.60 4.30
611 612 2.690840 ACCTGGGGTGCTATTACCTAG 58.309 52.381 0.00 0.00 40.66 3.02
612 613 2.881266 ACCTGGGGTGCTATTACCTA 57.119 50.000 0.00 0.00 40.66 3.08
871 884 3.695606 GGACCAGCAGAGCGGACA 61.696 66.667 6.83 0.00 0.00 4.02
1305 1383 8.101419 AGTTTGGTAGATCTACTTACCTTTTGG 58.899 37.037 27.68 0.00 39.67 3.28
1639 1745 9.695526 TTCAGTTAGTTCATTTGATTTGGATTG 57.304 29.630 0.00 0.00 0.00 2.67
1802 1908 6.604735 TTTCTTCAGCAAGAACTACACTTC 57.395 37.500 0.00 0.00 46.38 3.01
1851 1960 4.205587 ACCTCAGATCATTTGCCATCTTC 58.794 43.478 0.00 0.00 0.00 2.87
1898 2007 2.358737 GCTCCTTGTCACCCACCG 60.359 66.667 0.00 0.00 0.00 4.94
1972 2081 4.573900 TCAGCCATCTTCTTCTTCTGAAC 58.426 43.478 0.00 0.00 0.00 3.18
2203 2336 8.724113 TCAGATTCATCTAAGATCTCCTTCAT 57.276 34.615 0.00 0.00 34.85 2.57
2277 2509 5.108517 CAACTTGCAACAACATAACTTGGT 58.891 37.500 0.00 0.00 0.00 3.67
2342 2575 4.306600 CAAATTCACTTAACTTGGGGCAC 58.693 43.478 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.