Multiple sequence alignment - TraesCS4B01G087600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G087600 chr4B 100.000 3343 0 0 1 3343 88157605 88154263 0.000000e+00 6174.0
1 TraesCS4B01G087600 chr4B 89.455 1119 111 6 1071 2183 88404771 88403654 0.000000e+00 1406.0
2 TraesCS4B01G087600 chr4A 90.963 2888 135 45 448 3310 537184577 537181791 0.000000e+00 3771.0
3 TraesCS4B01G087600 chr4A 89.455 1119 111 6 1071 2183 537274083 537272966 0.000000e+00 1406.0
4 TraesCS4B01G087600 chr4A 90.909 176 15 1 220 395 537185873 537185699 5.580000e-58 235.0
5 TraesCS4B01G087600 chr4A 79.245 212 36 7 62 269 520131122 520131329 1.250000e-29 141.0
6 TraesCS4B01G087600 chr4A 78.344 157 32 2 73 228 175416150 175415995 2.120000e-17 100.0
7 TraesCS4B01G087600 chr4D 94.181 2492 92 16 771 3229 59412041 59414512 0.000000e+00 3749.0
8 TraesCS4B01G087600 chr4D 89.991 1119 105 6 1071 2183 58946176 58947293 0.000000e+00 1439.0
9 TraesCS4B01G087600 chr4D 85.884 588 47 19 643 1222 59023624 59024183 7.990000e-166 593.0
10 TraesCS4B01G087600 chr4D 91.329 346 24 4 448 788 59411682 59412026 5.050000e-128 468.0
11 TraesCS4B01G087600 chr4D 88.936 235 13 7 1624 1850 59024182 59024411 9.130000e-71 278.0
12 TraesCS4B01G087600 chr4D 94.643 168 4 2 448 610 59023455 59023622 4.280000e-64 255.0
13 TraesCS4B01G087600 chr5D 86.018 329 42 4 1836 2160 357018412 357018084 1.910000e-92 350.0
14 TraesCS4B01G087600 chr5D 85.933 327 40 4 1830 2151 59887297 59887622 8.880000e-91 344.0
15 TraesCS4B01G087600 chr5B 85.207 338 40 6 1830 2160 271262421 271262755 4.130000e-89 339.0
16 TraesCS4B01G087600 chr5B 85.410 329 44 2 1836 2160 421719383 421719055 4.130000e-89 339.0
17 TraesCS4B01G087600 chr5B 85.345 116 16 1 85 199 214143354 214143239 5.860000e-23 119.0
18 TraesCS4B01G087600 chr3B 80.702 171 29 4 61 229 818995184 818995016 2.710000e-26 130.0
19 TraesCS4B01G087600 chr2D 81.935 155 26 2 78 230 12665867 12666021 2.710000e-26 130.0
20 TraesCS4B01G087600 chr2D 81.159 138 25 1 81 217 491946499 491946636 3.530000e-20 110.0
21 TraesCS4B01G087600 chrUn 79.290 169 31 4 65 229 68821189 68821357 7.580000e-22 115.0
22 TraesCS4B01G087600 chrUn 92.063 63 4 1 1 63 51448813 51448874 1.650000e-13 87.9
23 TraesCS4B01G087600 chr5A 79.874 159 31 1 63 220 675309132 675308974 7.580000e-22 115.0
24 TraesCS4B01G087600 chr1A 81.884 138 22 3 63 199 197140503 197140638 2.730000e-21 113.0
25 TraesCS4B01G087600 chr1A 95.000 60 2 1 4 63 478263477 478263419 3.550000e-15 93.5
26 TraesCS4B01G087600 chr7D 78.824 170 32 4 63 230 503923516 503923683 9.800000e-21 111.0
27 TraesCS4B01G087600 chr7D 93.651 63 3 1 1 63 277000142 277000203 3.550000e-15 93.5
28 TraesCS4B01G087600 chr7D 91.935 62 4 1 1 62 571185560 571185620 5.940000e-13 86.1
29 TraesCS4B01G087600 chr7B 93.548 62 3 1 1 62 478729938 478729998 1.280000e-14 91.6
30 TraesCS4B01G087600 chr7B 92.063 63 4 1 1 63 177877140 177877079 1.650000e-13 87.9
31 TraesCS4B01G087600 chr7A 92.063 63 4 1 1 63 258765898 258765959 1.650000e-13 87.9
32 TraesCS4B01G087600 chr2A 91.935 62 4 1 2 63 458900220 458900160 5.940000e-13 86.1
33 TraesCS4B01G087600 chr1B 91.935 62 4 1 1 62 242238052 242238112 5.940000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G087600 chr4B 88154263 88157605 3342 True 6174.000000 6174 100.000 1 3343 1 chr4B.!!$R1 3342
1 TraesCS4B01G087600 chr4B 88403654 88404771 1117 True 1406.000000 1406 89.455 1071 2183 1 chr4B.!!$R2 1112
2 TraesCS4B01G087600 chr4A 537181791 537185873 4082 True 2003.000000 3771 90.936 220 3310 2 chr4A.!!$R3 3090
3 TraesCS4B01G087600 chr4A 537272966 537274083 1117 True 1406.000000 1406 89.455 1071 2183 1 chr4A.!!$R2 1112
4 TraesCS4B01G087600 chr4D 59411682 59414512 2830 False 2108.500000 3749 92.755 448 3229 2 chr4D.!!$F3 2781
5 TraesCS4B01G087600 chr4D 58946176 58947293 1117 False 1439.000000 1439 89.991 1071 2183 1 chr4D.!!$F1 1112
6 TraesCS4B01G087600 chr4D 59023455 59024411 956 False 375.333333 593 89.821 448 1850 3 chr4D.!!$F2 1402

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
77 78 0.030603 GACAGGAGGAGGGAGGGATT 60.031 60.000 0.0 0.0 0.00 3.01 F
147 148 0.038343 CGCAAACCTCCCCACATTTG 60.038 55.000 0.0 0.0 35.57 2.32 F
854 1966 0.309612 GAAACCGCACACAAATCCGT 59.690 50.000 0.0 0.0 0.00 4.69 F
2219 3349 1.079057 GCTCCCGACCAAGAAGACC 60.079 63.158 0.0 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1051 2167 4.009675 TCTTGTGACTTTGTGTGAGCTTT 58.990 39.130 0.00 0.00 0.0 3.51 R
1979 3109 4.021925 GTGCCGGCCTTGAGACCT 62.022 66.667 26.77 0.00 0.0 3.85 R
2319 3449 0.179056 GGCGATGATTCTTCCGGGAA 60.179 55.000 9.52 9.52 0.0 3.97 R
3021 4185 0.595053 CGTGCGTGCTAGTAGATGGG 60.595 60.000 0.00 0.00 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.175236 GGCTCTGCCCTTTCTTTCG 58.825 57.895 0.00 0.00 44.06 3.46
24 25 0.606673 GGCTCTGCCCTTTCTTTCGT 60.607 55.000 0.00 0.00 44.06 3.85
25 26 1.338769 GGCTCTGCCCTTTCTTTCGTA 60.339 52.381 0.00 0.00 44.06 3.43
26 27 1.732809 GCTCTGCCCTTTCTTTCGTAC 59.267 52.381 0.00 0.00 0.00 3.67
27 28 2.347731 CTCTGCCCTTTCTTTCGTACC 58.652 52.381 0.00 0.00 0.00 3.34
28 29 1.002773 TCTGCCCTTTCTTTCGTACCC 59.997 52.381 0.00 0.00 0.00 3.69
29 30 1.003233 CTGCCCTTTCTTTCGTACCCT 59.997 52.381 0.00 0.00 0.00 4.34
30 31 1.422402 TGCCCTTTCTTTCGTACCCTT 59.578 47.619 0.00 0.00 0.00 3.95
31 32 2.158579 TGCCCTTTCTTTCGTACCCTTT 60.159 45.455 0.00 0.00 0.00 3.11
32 33 2.228103 GCCCTTTCTTTCGTACCCTTTG 59.772 50.000 0.00 0.00 0.00 2.77
33 34 3.483421 CCCTTTCTTTCGTACCCTTTGT 58.517 45.455 0.00 0.00 0.00 2.83
34 35 4.644498 CCCTTTCTTTCGTACCCTTTGTA 58.356 43.478 0.00 0.00 0.00 2.41
35 36 4.453478 CCCTTTCTTTCGTACCCTTTGTAC 59.547 45.833 0.00 0.00 45.31 2.90
36 37 5.303165 CCTTTCTTTCGTACCCTTTGTACT 58.697 41.667 0.00 0.00 46.36 2.73
37 38 5.407691 CCTTTCTTTCGTACCCTTTGTACTC 59.592 44.000 0.00 0.00 46.36 2.59
38 39 5.534207 TTCTTTCGTACCCTTTGTACTCA 57.466 39.130 0.00 0.00 46.36 3.41
39 40 5.733620 TCTTTCGTACCCTTTGTACTCAT 57.266 39.130 0.00 0.00 46.36 2.90
40 41 6.105397 TCTTTCGTACCCTTTGTACTCATT 57.895 37.500 0.00 0.00 46.36 2.57
41 42 5.929992 TCTTTCGTACCCTTTGTACTCATTG 59.070 40.000 0.00 0.00 46.36 2.82
42 43 4.877378 TCGTACCCTTTGTACTCATTGT 57.123 40.909 0.00 0.00 46.36 2.71
43 44 4.813027 TCGTACCCTTTGTACTCATTGTC 58.187 43.478 0.00 0.00 46.36 3.18
44 45 4.281435 TCGTACCCTTTGTACTCATTGTCA 59.719 41.667 0.00 0.00 46.36 3.58
45 46 4.625742 CGTACCCTTTGTACTCATTGTCAG 59.374 45.833 0.00 0.00 46.36 3.51
46 47 4.021102 ACCCTTTGTACTCATTGTCAGG 57.979 45.455 0.00 0.00 0.00 3.86
47 48 3.650942 ACCCTTTGTACTCATTGTCAGGA 59.349 43.478 0.00 0.00 0.00 3.86
48 49 4.289672 ACCCTTTGTACTCATTGTCAGGAT 59.710 41.667 0.00 0.00 0.00 3.24
49 50 4.878397 CCCTTTGTACTCATTGTCAGGATC 59.122 45.833 0.00 0.00 0.00 3.36
50 51 4.568359 CCTTTGTACTCATTGTCAGGATCG 59.432 45.833 0.00 0.00 0.00 3.69
51 52 4.801330 TTGTACTCATTGTCAGGATCGT 57.199 40.909 0.00 0.00 0.00 3.73
52 53 5.907866 TTGTACTCATTGTCAGGATCGTA 57.092 39.130 0.00 0.00 0.00 3.43
53 54 5.907866 TGTACTCATTGTCAGGATCGTAA 57.092 39.130 0.00 0.00 0.00 3.18
54 55 5.647589 TGTACTCATTGTCAGGATCGTAAC 58.352 41.667 0.00 0.00 0.00 2.50
55 56 4.124851 ACTCATTGTCAGGATCGTAACC 57.875 45.455 0.00 0.00 0.00 2.85
56 57 3.118738 ACTCATTGTCAGGATCGTAACCC 60.119 47.826 0.00 0.00 0.00 4.11
57 58 2.169769 TCATTGTCAGGATCGTAACCCC 59.830 50.000 0.00 0.00 0.00 4.95
58 59 0.533491 TTGTCAGGATCGTAACCCCG 59.467 55.000 0.00 0.00 0.00 5.73
59 60 0.323633 TGTCAGGATCGTAACCCCGA 60.324 55.000 0.00 0.00 41.73 5.14
60 61 0.101939 GTCAGGATCGTAACCCCGAC 59.898 60.000 0.00 0.00 40.08 4.79
61 62 0.323633 TCAGGATCGTAACCCCGACA 60.324 55.000 0.00 0.00 40.08 4.35
62 63 0.102481 CAGGATCGTAACCCCGACAG 59.898 60.000 0.00 0.00 40.08 3.51
63 64 1.041447 AGGATCGTAACCCCGACAGG 61.041 60.000 0.00 0.00 40.08 4.00
64 65 1.039233 GGATCGTAACCCCGACAGGA 61.039 60.000 0.00 0.00 40.08 3.86
65 66 0.384669 GATCGTAACCCCGACAGGAG 59.615 60.000 0.00 0.00 40.08 3.69
66 67 1.041447 ATCGTAACCCCGACAGGAGG 61.041 60.000 0.00 0.00 40.08 4.30
67 68 1.679977 CGTAACCCCGACAGGAGGA 60.680 63.158 0.00 0.00 41.02 3.71
68 69 1.664321 CGTAACCCCGACAGGAGGAG 61.664 65.000 0.00 0.00 41.02 3.69
69 70 1.001248 TAACCCCGACAGGAGGAGG 59.999 63.158 0.00 0.00 41.02 4.30
70 71 2.525284 TAACCCCGACAGGAGGAGGG 62.525 65.000 0.00 0.00 43.88 4.30
71 72 4.075793 CCCCGACAGGAGGAGGGA 62.076 72.222 0.18 0.00 46.64 4.20
72 73 2.443016 CCCGACAGGAGGAGGGAG 60.443 72.222 0.00 0.00 46.64 4.30
73 74 2.443016 CCGACAGGAGGAGGGAGG 60.443 72.222 0.00 0.00 41.02 4.30
74 75 2.443016 CGACAGGAGGAGGGAGGG 60.443 72.222 0.00 0.00 0.00 4.30
75 76 2.997584 CGACAGGAGGAGGGAGGGA 61.998 68.421 0.00 0.00 0.00 4.20
76 77 1.629297 GACAGGAGGAGGGAGGGAT 59.371 63.158 0.00 0.00 0.00 3.85
77 78 0.030603 GACAGGAGGAGGGAGGGATT 60.031 60.000 0.00 0.00 0.00 3.01
78 79 0.423544 ACAGGAGGAGGGAGGGATTT 59.576 55.000 0.00 0.00 0.00 2.17
79 80 1.203622 ACAGGAGGAGGGAGGGATTTT 60.204 52.381 0.00 0.00 0.00 1.82
80 81 1.925959 CAGGAGGAGGGAGGGATTTTT 59.074 52.381 0.00 0.00 0.00 1.94
81 82 1.925959 AGGAGGAGGGAGGGATTTTTG 59.074 52.381 0.00 0.00 0.00 2.44
82 83 1.063642 GGAGGAGGGAGGGATTTTTGG 60.064 57.143 0.00 0.00 0.00 3.28
83 84 1.641192 GAGGAGGGAGGGATTTTTGGT 59.359 52.381 0.00 0.00 0.00 3.67
84 85 1.359130 AGGAGGGAGGGATTTTTGGTG 59.641 52.381 0.00 0.00 0.00 4.17
85 86 1.619704 GGAGGGAGGGATTTTTGGTGG 60.620 57.143 0.00 0.00 0.00 4.61
86 87 0.413434 AGGGAGGGATTTTTGGTGGG 59.587 55.000 0.00 0.00 0.00 4.61
87 88 1.264749 GGGAGGGATTTTTGGTGGGC 61.265 60.000 0.00 0.00 0.00 5.36
88 89 1.264749 GGAGGGATTTTTGGTGGGCC 61.265 60.000 0.00 0.00 0.00 5.80
89 90 0.544120 GAGGGATTTTTGGTGGGCCA 60.544 55.000 0.00 0.00 44.38 5.36
90 91 0.118952 AGGGATTTTTGGTGGGCCAT 59.881 50.000 10.70 0.00 45.56 4.40
91 92 0.252761 GGGATTTTTGGTGGGCCATG 59.747 55.000 10.70 0.00 45.56 3.66
92 93 0.252761 GGATTTTTGGTGGGCCATGG 59.747 55.000 10.70 7.63 45.56 3.66
93 94 0.392863 GATTTTTGGTGGGCCATGGC 60.393 55.000 29.47 29.47 45.56 4.40
94 95 1.132554 ATTTTTGGTGGGCCATGGCA 61.133 50.000 36.56 16.33 45.56 4.92
95 96 1.766625 TTTTTGGTGGGCCATGGCAG 61.767 55.000 36.56 0.31 45.56 4.85
96 97 2.961559 TTTTGGTGGGCCATGGCAGT 62.962 55.000 36.56 0.00 45.56 4.40
97 98 2.961559 TTTGGTGGGCCATGGCAGTT 62.962 55.000 36.56 0.00 45.56 3.16
98 99 2.086599 TTGGTGGGCCATGGCAGTTA 62.087 55.000 36.56 17.21 45.56 2.24
99 100 1.754234 GGTGGGCCATGGCAGTTAG 60.754 63.158 36.56 0.00 44.11 2.34
100 101 1.302949 GTGGGCCATGGCAGTTAGA 59.697 57.895 36.56 11.41 44.11 2.10
101 102 0.323360 GTGGGCCATGGCAGTTAGAA 60.323 55.000 36.56 11.61 44.11 2.10
102 103 0.407528 TGGGCCATGGCAGTTAGAAA 59.592 50.000 36.56 10.55 44.11 2.52
103 104 0.817654 GGGCCATGGCAGTTAGAAAC 59.182 55.000 36.56 16.46 44.11 2.78
104 105 1.544724 GGCCATGGCAGTTAGAAACA 58.455 50.000 36.56 0.00 44.11 2.83
105 106 1.474077 GGCCATGGCAGTTAGAAACAG 59.526 52.381 36.56 0.00 44.11 3.16
106 107 1.474077 GCCATGGCAGTTAGAAACAGG 59.526 52.381 32.08 0.00 41.49 4.00
107 108 1.474077 CCATGGCAGTTAGAAACAGGC 59.526 52.381 0.00 2.42 42.57 4.85
108 109 2.440409 CATGGCAGTTAGAAACAGGCT 58.560 47.619 9.50 0.00 42.68 4.58
109 110 2.656947 TGGCAGTTAGAAACAGGCTT 57.343 45.000 9.50 0.00 42.68 4.35
110 111 2.229792 TGGCAGTTAGAAACAGGCTTG 58.770 47.619 9.50 0.00 42.68 4.01
111 112 2.230660 GGCAGTTAGAAACAGGCTTGT 58.769 47.619 0.00 0.00 39.78 3.16
112 113 2.030805 GGCAGTTAGAAACAGGCTTGTG 60.031 50.000 0.65 0.00 39.78 3.33
113 114 2.878406 GCAGTTAGAAACAGGCTTGTGA 59.122 45.455 0.65 0.00 37.67 3.58
114 115 3.058639 GCAGTTAGAAACAGGCTTGTGAG 60.059 47.826 0.65 0.00 37.67 3.51
123 124 4.373116 GCTTGTGAGCGGTCCGGA 62.373 66.667 14.38 0.00 39.48 5.14
124 125 2.432628 CTTGTGAGCGGTCCGGAC 60.433 66.667 27.04 27.04 0.00 4.79
125 126 2.915659 TTGTGAGCGGTCCGGACT 60.916 61.111 32.52 14.86 0.00 3.85
126 127 2.820767 CTTGTGAGCGGTCCGGACTC 62.821 65.000 32.52 22.71 0.00 3.36
127 128 4.131088 GTGAGCGGTCCGGACTCC 62.131 72.222 32.52 22.72 0.00 3.85
138 139 2.046217 GGACTCCCGCAAACCTCC 60.046 66.667 0.00 0.00 0.00 4.30
139 140 2.046217 GACTCCCGCAAACCTCCC 60.046 66.667 0.00 0.00 0.00 4.30
140 141 3.623703 GACTCCCGCAAACCTCCCC 62.624 68.421 0.00 0.00 0.00 4.81
141 142 3.646715 CTCCCGCAAACCTCCCCA 61.647 66.667 0.00 0.00 0.00 4.96
142 143 3.920093 CTCCCGCAAACCTCCCCAC 62.920 68.421 0.00 0.00 0.00 4.61
143 144 4.278513 CCCGCAAACCTCCCCACA 62.279 66.667 0.00 0.00 0.00 4.17
144 145 2.035626 CCGCAAACCTCCCCACAT 59.964 61.111 0.00 0.00 0.00 3.21
145 146 1.606313 CCGCAAACCTCCCCACATT 60.606 57.895 0.00 0.00 0.00 2.71
146 147 1.184970 CCGCAAACCTCCCCACATTT 61.185 55.000 0.00 0.00 0.00 2.32
147 148 0.038343 CGCAAACCTCCCCACATTTG 60.038 55.000 0.00 0.00 35.57 2.32
148 149 1.047801 GCAAACCTCCCCACATTTGT 58.952 50.000 0.00 0.00 35.06 2.83
149 150 1.000843 GCAAACCTCCCCACATTTGTC 59.999 52.381 0.00 0.00 35.06 3.18
150 151 2.597455 CAAACCTCCCCACATTTGTCT 58.403 47.619 0.00 0.00 0.00 3.41
151 152 2.558359 CAAACCTCCCCACATTTGTCTC 59.442 50.000 0.00 0.00 0.00 3.36
152 153 1.444933 ACCTCCCCACATTTGTCTCA 58.555 50.000 0.00 0.00 0.00 3.27
153 154 1.352352 ACCTCCCCACATTTGTCTCAG 59.648 52.381 0.00 0.00 0.00 3.35
154 155 1.340405 CCTCCCCACATTTGTCTCAGG 60.340 57.143 0.00 0.00 0.00 3.86
155 156 1.352352 CTCCCCACATTTGTCTCAGGT 59.648 52.381 0.00 0.00 0.00 4.00
156 157 1.780309 TCCCCACATTTGTCTCAGGTT 59.220 47.619 0.00 0.00 0.00 3.50
157 158 2.176798 TCCCCACATTTGTCTCAGGTTT 59.823 45.455 0.00 0.00 0.00 3.27
158 159 3.396276 TCCCCACATTTGTCTCAGGTTTA 59.604 43.478 0.00 0.00 0.00 2.01
159 160 3.506067 CCCCACATTTGTCTCAGGTTTAC 59.494 47.826 0.00 0.00 0.00 2.01
160 161 3.188460 CCCACATTTGTCTCAGGTTTACG 59.812 47.826 0.00 0.00 0.00 3.18
161 162 3.188460 CCACATTTGTCTCAGGTTTACGG 59.812 47.826 0.00 0.00 0.00 4.02
162 163 3.188460 CACATTTGTCTCAGGTTTACGGG 59.812 47.826 0.00 0.00 0.00 5.28
163 164 3.071892 ACATTTGTCTCAGGTTTACGGGA 59.928 43.478 0.00 0.00 0.00 5.14
164 165 3.396260 TTTGTCTCAGGTTTACGGGAG 57.604 47.619 0.00 0.00 0.00 4.30
165 166 2.297698 TGTCTCAGGTTTACGGGAGA 57.702 50.000 0.00 0.00 33.79 3.71
166 167 2.600790 TGTCTCAGGTTTACGGGAGAA 58.399 47.619 0.00 0.00 36.58 2.87
167 168 2.967201 TGTCTCAGGTTTACGGGAGAAA 59.033 45.455 0.00 0.00 36.58 2.52
168 169 3.388676 TGTCTCAGGTTTACGGGAGAAAA 59.611 43.478 0.00 0.00 36.58 2.29
169 170 3.744942 GTCTCAGGTTTACGGGAGAAAAC 59.255 47.826 0.00 0.00 36.58 2.43
170 171 2.735134 CTCAGGTTTACGGGAGAAAACG 59.265 50.000 0.00 0.00 36.63 3.60
171 172 1.196127 CAGGTTTACGGGAGAAAACGC 59.804 52.381 0.00 0.00 36.63 4.84
176 177 3.475774 CGGGAGAAAACGCGTCCG 61.476 66.667 14.44 16.91 40.39 4.79
177 178 2.048877 GGGAGAAAACGCGTCCGA 60.049 61.111 14.44 0.00 38.29 4.55
178 179 1.665599 GGGAGAAAACGCGTCCGAA 60.666 57.895 14.44 0.00 38.29 4.30
179 180 1.490258 GGAGAAAACGCGTCCGAAC 59.510 57.895 14.44 4.60 38.29 3.95
180 181 1.490258 GAGAAAACGCGTCCGAACC 59.510 57.895 14.44 0.00 38.29 3.62
181 182 1.216941 GAGAAAACGCGTCCGAACCA 61.217 55.000 14.44 0.00 38.29 3.67
182 183 1.083209 GAAAACGCGTCCGAACCAC 60.083 57.895 14.44 0.00 38.29 4.16
183 184 2.737665 GAAAACGCGTCCGAACCACG 62.738 60.000 14.44 0.00 40.35 4.94
188 189 3.487202 CGTCCGAACCACGCCATG 61.487 66.667 0.00 0.00 41.07 3.66
198 199 3.167189 CACGCCATGGACCAATACA 57.833 52.632 18.40 0.00 0.00 2.29
199 200 1.679139 CACGCCATGGACCAATACAT 58.321 50.000 18.40 0.00 0.00 2.29
200 201 1.334556 CACGCCATGGACCAATACATG 59.665 52.381 18.40 0.00 45.71 3.21
201 202 0.311790 CGCCATGGACCAATACATGC 59.688 55.000 18.40 0.00 44.88 4.06
202 203 0.675633 GCCATGGACCAATACATGCC 59.324 55.000 18.40 0.00 44.88 4.40
203 204 1.331214 CCATGGACCAATACATGCCC 58.669 55.000 5.56 0.00 44.88 5.36
204 205 0.953727 CATGGACCAATACATGCCCG 59.046 55.000 0.00 0.00 40.36 6.13
205 206 0.823356 ATGGACCAATACATGCCCGC 60.823 55.000 0.00 0.00 0.00 6.13
206 207 1.152963 GGACCAATACATGCCCGCT 60.153 57.895 0.00 0.00 0.00 5.52
207 208 1.166531 GGACCAATACATGCCCGCTC 61.167 60.000 0.00 0.00 0.00 5.03
208 209 1.498865 GACCAATACATGCCCGCTCG 61.499 60.000 0.00 0.00 0.00 5.03
209 210 2.253758 CCAATACATGCCCGCTCGG 61.254 63.158 0.48 0.48 0.00 4.63
210 211 1.227527 CAATACATGCCCGCTCGGA 60.228 57.895 10.28 0.00 37.50 4.55
211 212 0.603707 CAATACATGCCCGCTCGGAT 60.604 55.000 10.28 0.00 37.50 4.18
212 213 0.603707 AATACATGCCCGCTCGGATG 60.604 55.000 10.28 8.94 37.50 3.51
213 214 1.471829 ATACATGCCCGCTCGGATGA 61.472 55.000 10.28 0.00 37.50 2.92
214 215 2.363711 TACATGCCCGCTCGGATGAC 62.364 60.000 10.28 0.00 37.50 3.06
215 216 3.157252 ATGCCCGCTCGGATGACT 61.157 61.111 10.28 0.00 37.50 3.41
216 217 2.735772 ATGCCCGCTCGGATGACTT 61.736 57.895 10.28 0.00 37.50 3.01
217 218 2.586357 GCCCGCTCGGATGACTTC 60.586 66.667 10.28 0.00 37.50 3.01
218 219 2.107141 CCCGCTCGGATGACTTCC 59.893 66.667 10.28 0.00 41.59 3.46
226 227 2.750815 GGATGACTTCCGTTGTCCG 58.249 57.895 0.00 0.00 33.93 4.79
265 266 1.043116 AGGGTCGGCGATGAAGATGA 61.043 55.000 14.79 0.00 0.00 2.92
267 268 0.876342 GGTCGGCGATGAAGATGACC 60.876 60.000 14.79 2.32 39.10 4.02
287 288 5.362717 TGACCTATCTTCGTATGGTTGATGT 59.637 40.000 0.00 0.00 0.00 3.06
297 298 6.699366 TCGTATGGTTGATGTAGTGGTTTAA 58.301 36.000 0.00 0.00 0.00 1.52
310 311 9.709495 ATGTAGTGGTTTAACGTAAAATCTACA 57.291 29.630 18.24 18.24 39.11 2.74
313 314 6.146021 AGTGGTTTAACGTAAAATCTACACCG 59.854 38.462 0.00 0.00 0.00 4.94
324 325 5.670792 AAATCTACACCGACTATTGGACA 57.329 39.130 0.00 0.00 0.00 4.02
364 365 9.872721 TCATCATTATACAATTGTGCACAAAAT 57.127 25.926 34.06 23.85 39.55 1.82
372 373 6.576185 ACAATTGTGCACAAAATCTCTCTTT 58.424 32.000 34.06 18.23 39.55 2.52
384 385 9.321562 ACAAAATCTCTCTTTCGTTACTAACAA 57.678 29.630 0.00 0.00 0.00 2.83
401 1420 3.074504 ACAATCATTGTCGCATGATGC 57.925 42.857 7.49 7.49 40.56 3.91
422 1441 8.293157 TGATGCGATGATTTTGTGTAAAACTTA 58.707 29.630 0.00 0.00 38.50 2.24
433 1452 6.795098 TGTGTAAAACTTATGTGCCTACTG 57.205 37.500 0.00 0.00 0.00 2.74
664 1739 8.112183 AGGATCAAATTTTACAGTTCTCATCCT 58.888 33.333 0.00 0.00 32.16 3.24
666 1741 6.913170 TCAAATTTTACAGTTCTCATCCTGC 58.087 36.000 0.00 0.00 31.76 4.85
701 1776 8.553696 TGATCAATACAATGAATCATCAACTCG 58.446 33.333 0.00 0.00 39.49 4.18
723 1803 9.471084 ACTCGAAAAAGAAAAGAAAAAGACAAA 57.529 25.926 0.00 0.00 0.00 2.83
854 1966 0.309612 GAAACCGCACACAAATCCGT 59.690 50.000 0.00 0.00 0.00 4.69
890 2002 5.220265 CCGCTTGCAATTGCTTTAACATAAG 60.220 40.000 29.37 21.31 42.66 1.73
915 2028 6.454715 GCTGTTGCTTTCTCAACTTCAAAAAG 60.455 38.462 7.93 0.00 44.83 2.27
919 2032 8.495148 GTTGCTTTCTCAACTTCAAAAAGAAAA 58.505 29.630 0.00 0.00 42.15 2.29
920 2033 8.600449 TGCTTTCTCAACTTCAAAAAGAAAAA 57.400 26.923 0.00 0.00 36.01 1.94
1051 2167 1.538047 GCATCCAGAACCAGAAGCAA 58.462 50.000 0.00 0.00 0.00 3.91
1316 2432 2.791868 GCAGTTTGGCAACCCGGTT 61.792 57.895 0.00 0.00 32.70 4.44
2099 3229 2.594962 GCTGTGGGTGTTCGACGTG 61.595 63.158 0.00 0.00 0.00 4.49
2186 3316 1.869574 CGTCCGCGTGTGATGAGAG 60.870 63.158 4.92 0.00 0.00 3.20
2189 3319 2.182791 CGCGTGTGATGAGAGCCT 59.817 61.111 0.00 0.00 0.00 4.58
2219 3349 1.079057 GCTCCCGACCAAGAAGACC 60.079 63.158 0.00 0.00 0.00 3.85
2269 3399 2.754552 TGTTCTTGAGTTGCAGTGCTTT 59.245 40.909 17.60 1.16 0.00 3.51
2327 3457 2.186903 GATCTGCGCTTCCCGGAA 59.813 61.111 9.73 0.00 36.65 4.30
2397 3532 7.221838 TCGCCAAGAAGAAAACAACAAAAATAG 59.778 33.333 0.00 0.00 0.00 1.73
2428 3568 2.299867 TGTAGCTTGTCAGATCTGTGCA 59.700 45.455 21.92 18.08 0.00 4.57
2438 3578 4.097741 GTCAGATCTGTGCACTCTAGTCAT 59.902 45.833 21.92 0.00 0.00 3.06
2453 3593 6.114187 TCTAGTCATCATGGTTGTGAACTT 57.886 37.500 0.00 0.00 0.00 2.66
2589 3734 6.769822 AGTTGGAAGATCATATCATGTGGTTC 59.230 38.462 0.00 0.00 0.00 3.62
2609 3754 3.366396 TCCTCCATAGTTCTGTCCAGAC 58.634 50.000 0.00 0.00 37.14 3.51
2796 3941 6.665992 ATCTAGCGTCCTATTCAATTGGTA 57.334 37.500 5.42 0.00 0.00 3.25
2896 4060 0.317269 CACTCCACGCAACAGCAAAG 60.317 55.000 0.00 0.00 0.00 2.77
2902 4066 3.982241 GCAACAGCAAAGCCGGCT 61.982 61.111 27.08 27.08 43.77 5.52
2915 4079 1.901948 CCGGCTAGCTATCCGTCCA 60.902 63.158 28.76 0.00 43.87 4.02
3022 4186 2.338620 GGTTTTGGACCGCTTGCC 59.661 61.111 0.00 0.00 39.00 4.52
3023 4187 2.338620 GTTTTGGACCGCTTGCCC 59.661 61.111 0.00 0.00 0.00 5.36
3024 4188 2.123683 TTTTGGACCGCTTGCCCA 60.124 55.556 0.00 0.00 0.00 5.36
3025 4189 1.532794 TTTTGGACCGCTTGCCCAT 60.533 52.632 0.00 0.00 0.00 4.00
3026 4190 1.531739 TTTTGGACCGCTTGCCCATC 61.532 55.000 0.00 0.00 0.00 3.51
3027 4191 2.424842 TTTGGACCGCTTGCCCATCT 62.425 55.000 0.00 0.00 0.00 2.90
3028 4192 1.558167 TTGGACCGCTTGCCCATCTA 61.558 55.000 0.00 0.00 0.00 1.98
3029 4193 1.523938 GGACCGCTTGCCCATCTAC 60.524 63.158 0.00 0.00 0.00 2.59
3030 4194 1.522569 GACCGCTTGCCCATCTACT 59.477 57.895 0.00 0.00 0.00 2.57
3031 4195 0.750850 GACCGCTTGCCCATCTACTA 59.249 55.000 0.00 0.00 0.00 1.82
3037 4201 0.179084 TTGCCCATCTACTAGCACGC 60.179 55.000 0.00 0.00 34.37 5.34
3054 4218 1.141234 GCACGGCCCTCTACTGTAC 59.859 63.158 0.00 0.00 0.00 2.90
3057 4221 1.452651 CGGCCCTCTACTGTACCGA 60.453 63.158 7.76 0.00 43.19 4.69
3070 4234 8.213518 TCTACTGTACCGACTTTTATTATCGT 57.786 34.615 0.00 0.00 34.02 3.73
3073 4237 6.971184 ACTGTACCGACTTTTATTATCGTGAG 59.029 38.462 0.00 0.00 34.02 3.51
3074 4238 6.267817 TGTACCGACTTTTATTATCGTGAGG 58.732 40.000 0.00 0.00 34.02 3.86
3075 4239 4.690122 ACCGACTTTTATTATCGTGAGGG 58.310 43.478 0.00 0.00 34.02 4.30
3076 4240 4.161001 ACCGACTTTTATTATCGTGAGGGT 59.839 41.667 0.00 0.00 34.02 4.34
3077 4241 4.743644 CCGACTTTTATTATCGTGAGGGTC 59.256 45.833 0.00 0.00 34.02 4.46
3078 4242 4.743644 CGACTTTTATTATCGTGAGGGTCC 59.256 45.833 0.00 0.00 0.00 4.46
3079 4243 5.451520 CGACTTTTATTATCGTGAGGGTCCT 60.452 44.000 0.00 0.00 0.00 3.85
3121 4293 1.546998 GCTGCATCCATCCATCCATCA 60.547 52.381 0.00 0.00 0.00 3.07
3192 4366 1.065273 GCTGCGCAATCCCAATGAG 59.935 57.895 13.05 0.00 0.00 2.90
3234 4408 4.321304 CGGTTCTTCTTCTCTTCTGTGCTA 60.321 45.833 0.00 0.00 0.00 3.49
3235 4409 4.926832 GGTTCTTCTTCTCTTCTGTGCTAC 59.073 45.833 0.00 0.00 0.00 3.58
3236 4410 4.792521 TCTTCTTCTCTTCTGTGCTACC 57.207 45.455 0.00 0.00 0.00 3.18
3237 4411 3.511934 TCTTCTTCTCTTCTGTGCTACCC 59.488 47.826 0.00 0.00 0.00 3.69
3238 4412 3.176924 TCTTCTCTTCTGTGCTACCCT 57.823 47.619 0.00 0.00 0.00 4.34
3239 4413 4.317530 TCTTCTCTTCTGTGCTACCCTA 57.682 45.455 0.00 0.00 0.00 3.53
3240 4414 4.017808 TCTTCTCTTCTGTGCTACCCTAC 58.982 47.826 0.00 0.00 0.00 3.18
3241 4415 2.736347 TCTCTTCTGTGCTACCCTACC 58.264 52.381 0.00 0.00 0.00 3.18
3244 4418 2.032620 CTTCTGTGCTACCCTACCGAT 58.967 52.381 0.00 0.00 0.00 4.18
3245 4419 2.154567 TCTGTGCTACCCTACCGATT 57.845 50.000 0.00 0.00 0.00 3.34
3255 4432 3.381335 ACCCTACCGATTACCACATTCT 58.619 45.455 0.00 0.00 0.00 2.40
3263 4440 5.118990 CCGATTACCACATTCTCAGTGAAT 58.881 41.667 0.00 0.00 45.52 2.57
3274 4451 1.738350 CTCAGTGAATCTGCCAGCTTG 59.262 52.381 0.00 0.00 43.32 4.01
3286 4463 4.523943 TCTGCCAGCTTGATGTATGTTTTT 59.476 37.500 0.00 0.00 0.00 1.94
3310 4487 6.017400 TCTCATCAAGTTTGGATTGCTTTC 57.983 37.500 0.00 0.00 0.00 2.62
3311 4488 5.047802 TCTCATCAAGTTTGGATTGCTTTCC 60.048 40.000 0.00 0.00 36.24 3.13
3312 4489 4.588106 TCATCAAGTTTGGATTGCTTTCCA 59.412 37.500 4.31 4.31 44.08 3.53
3313 4490 5.246656 TCATCAAGTTTGGATTGCTTTCCAT 59.753 36.000 8.71 0.00 45.08 3.41
3314 4491 4.885413 TCAAGTTTGGATTGCTTTCCATG 58.115 39.130 8.71 5.16 45.08 3.66
3315 4492 4.588106 TCAAGTTTGGATTGCTTTCCATGA 59.412 37.500 8.71 7.08 45.08 3.07
3316 4493 4.796038 AGTTTGGATTGCTTTCCATGAG 57.204 40.909 8.71 0.00 45.08 2.90
3317 4494 4.154942 AGTTTGGATTGCTTTCCATGAGT 58.845 39.130 8.71 2.72 45.08 3.41
3318 4495 4.021719 AGTTTGGATTGCTTTCCATGAGTG 60.022 41.667 8.71 0.00 45.08 3.51
3319 4496 3.159213 TGGATTGCTTTCCATGAGTGT 57.841 42.857 4.31 0.00 40.90 3.55
3320 4497 3.084039 TGGATTGCTTTCCATGAGTGTC 58.916 45.455 4.31 0.00 40.90 3.67
3321 4498 3.084039 GGATTGCTTTCCATGAGTGTCA 58.916 45.455 0.00 0.00 35.72 3.58
3322 4499 3.119708 GGATTGCTTTCCATGAGTGTCAC 60.120 47.826 0.00 0.00 35.72 3.67
3323 4500 1.896220 TGCTTTCCATGAGTGTCACC 58.104 50.000 0.00 0.00 0.00 4.02
3324 4501 1.421268 TGCTTTCCATGAGTGTCACCT 59.579 47.619 0.00 0.00 0.00 4.00
3325 4502 1.808945 GCTTTCCATGAGTGTCACCTG 59.191 52.381 0.00 0.00 0.00 4.00
3326 4503 2.430465 CTTTCCATGAGTGTCACCTGG 58.570 52.381 0.00 5.02 29.84 4.45
3327 4504 1.434188 TTCCATGAGTGTCACCTGGT 58.566 50.000 13.61 0.00 30.53 4.00
3328 4505 2.319025 TCCATGAGTGTCACCTGGTA 57.681 50.000 0.00 0.00 30.53 3.25
3329 4506 2.179427 TCCATGAGTGTCACCTGGTAG 58.821 52.381 0.00 0.00 30.53 3.18
3330 4507 1.406069 CCATGAGTGTCACCTGGTAGC 60.406 57.143 0.00 0.00 0.00 3.58
3331 4508 1.552337 CATGAGTGTCACCTGGTAGCT 59.448 52.381 0.00 0.00 0.00 3.32
3332 4509 1.717032 TGAGTGTCACCTGGTAGCTT 58.283 50.000 0.00 0.00 0.00 3.74
3333 4510 1.344438 TGAGTGTCACCTGGTAGCTTG 59.656 52.381 0.00 0.00 0.00 4.01
3334 4511 1.618837 GAGTGTCACCTGGTAGCTTGA 59.381 52.381 0.00 0.00 0.00 3.02
3335 4512 2.234908 GAGTGTCACCTGGTAGCTTGAT 59.765 50.000 0.00 0.00 0.00 2.57
3336 4513 2.027745 AGTGTCACCTGGTAGCTTGATG 60.028 50.000 0.00 0.00 0.00 3.07
3337 4514 1.977854 TGTCACCTGGTAGCTTGATGT 59.022 47.619 0.00 0.00 0.00 3.06
3338 4515 3.056107 GTGTCACCTGGTAGCTTGATGTA 60.056 47.826 0.00 0.00 0.00 2.29
3339 4516 3.774766 TGTCACCTGGTAGCTTGATGTAT 59.225 43.478 0.00 0.00 0.00 2.29
3340 4517 4.122776 GTCACCTGGTAGCTTGATGTATG 58.877 47.826 0.00 0.00 0.00 2.39
3341 4518 3.774766 TCACCTGGTAGCTTGATGTATGT 59.225 43.478 0.00 0.00 0.00 2.29
3342 4519 4.959839 TCACCTGGTAGCTTGATGTATGTA 59.040 41.667 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.732809 GTACGAAAGAAAGGGCAGAGC 59.267 52.381 0.00 0.00 0.00 4.09
7 8 2.347731 GGTACGAAAGAAAGGGCAGAG 58.652 52.381 0.00 0.00 0.00 3.35
8 9 1.002773 GGGTACGAAAGAAAGGGCAGA 59.997 52.381 0.00 0.00 0.00 4.26
9 10 1.003233 AGGGTACGAAAGAAAGGGCAG 59.997 52.381 0.00 0.00 0.00 4.85
10 11 1.061546 AGGGTACGAAAGAAAGGGCA 58.938 50.000 0.00 0.00 0.00 5.36
11 12 2.195741 AAGGGTACGAAAGAAAGGGC 57.804 50.000 0.00 0.00 0.00 5.19
12 13 3.483421 ACAAAGGGTACGAAAGAAAGGG 58.517 45.455 0.00 0.00 0.00 3.95
13 14 5.602458 GTACAAAGGGTACGAAAGAAAGG 57.398 43.478 0.00 0.00 42.69 3.11
24 25 4.841813 TCCTGACAATGAGTACAAAGGGTA 59.158 41.667 0.00 0.00 0.00 3.69
25 26 3.650942 TCCTGACAATGAGTACAAAGGGT 59.349 43.478 0.00 0.00 0.00 4.34
26 27 4.286297 TCCTGACAATGAGTACAAAGGG 57.714 45.455 0.00 0.00 0.00 3.95
27 28 4.568359 CGATCCTGACAATGAGTACAAAGG 59.432 45.833 0.00 0.00 0.00 3.11
28 29 5.171476 ACGATCCTGACAATGAGTACAAAG 58.829 41.667 0.00 0.00 0.00 2.77
29 30 5.147330 ACGATCCTGACAATGAGTACAAA 57.853 39.130 0.00 0.00 0.00 2.83
30 31 4.801330 ACGATCCTGACAATGAGTACAA 57.199 40.909 0.00 0.00 0.00 2.41
31 32 5.393787 GGTTACGATCCTGACAATGAGTACA 60.394 44.000 0.00 0.00 0.00 2.90
32 33 5.041940 GGTTACGATCCTGACAATGAGTAC 58.958 45.833 0.00 0.00 0.00 2.73
33 34 4.098960 GGGTTACGATCCTGACAATGAGTA 59.901 45.833 0.00 0.00 0.00 2.59
34 35 3.118738 GGGTTACGATCCTGACAATGAGT 60.119 47.826 0.00 0.00 0.00 3.41
35 36 3.458189 GGGTTACGATCCTGACAATGAG 58.542 50.000 0.00 0.00 0.00 2.90
36 37 2.169769 GGGGTTACGATCCTGACAATGA 59.830 50.000 0.00 0.00 0.00 2.57
37 38 2.561569 GGGGTTACGATCCTGACAATG 58.438 52.381 0.00 0.00 0.00 2.82
38 39 1.138266 CGGGGTTACGATCCTGACAAT 59.862 52.381 0.00 0.00 35.47 2.71
39 40 0.533491 CGGGGTTACGATCCTGACAA 59.467 55.000 0.00 0.00 35.47 3.18
40 41 0.323633 TCGGGGTTACGATCCTGACA 60.324 55.000 0.00 0.00 38.06 3.58
41 42 2.496942 TCGGGGTTACGATCCTGAC 58.503 57.895 0.00 0.00 38.06 3.51
42 43 0.323633 TGTCGGGGTTACGATCCTGA 60.324 55.000 0.00 0.00 45.47 3.86
43 44 0.102481 CTGTCGGGGTTACGATCCTG 59.898 60.000 0.00 0.00 45.47 3.86
44 45 1.041447 CCTGTCGGGGTTACGATCCT 61.041 60.000 0.00 0.00 45.47 3.24
45 46 1.039233 TCCTGTCGGGGTTACGATCC 61.039 60.000 0.00 0.00 45.47 3.36
46 47 0.384669 CTCCTGTCGGGGTTACGATC 59.615 60.000 0.00 0.00 45.47 3.69
47 48 1.041447 CCTCCTGTCGGGGTTACGAT 61.041 60.000 0.00 0.00 45.47 3.73
48 49 1.679977 CCTCCTGTCGGGGTTACGA 60.680 63.158 0.00 0.00 41.13 3.43
49 50 1.664321 CTCCTCCTGTCGGGGTTACG 61.664 65.000 0.00 0.00 35.33 3.18
50 51 1.328430 CCTCCTCCTGTCGGGGTTAC 61.328 65.000 0.00 0.00 35.33 2.50
51 52 1.001248 CCTCCTCCTGTCGGGGTTA 59.999 63.158 0.00 0.00 35.33 2.85
52 53 2.284699 CCTCCTCCTGTCGGGGTT 60.285 66.667 0.00 0.00 35.33 4.11
53 54 4.400251 CCCTCCTCCTGTCGGGGT 62.400 72.222 0.00 0.00 35.33 4.95
54 55 4.075793 TCCCTCCTCCTGTCGGGG 62.076 72.222 0.00 0.00 37.30 5.73
55 56 2.443016 CTCCCTCCTCCTGTCGGG 60.443 72.222 0.00 0.00 38.07 5.14
56 57 2.443016 CCTCCCTCCTCCTGTCGG 60.443 72.222 0.00 0.00 0.00 4.79
57 58 2.305314 ATCCCTCCCTCCTCCTGTCG 62.305 65.000 0.00 0.00 0.00 4.35
58 59 0.030603 AATCCCTCCCTCCTCCTGTC 60.031 60.000 0.00 0.00 0.00 3.51
59 60 0.423544 AAATCCCTCCCTCCTCCTGT 59.576 55.000 0.00 0.00 0.00 4.00
60 61 1.601248 AAAATCCCTCCCTCCTCCTG 58.399 55.000 0.00 0.00 0.00 3.86
61 62 1.925959 CAAAAATCCCTCCCTCCTCCT 59.074 52.381 0.00 0.00 0.00 3.69
62 63 1.063642 CCAAAAATCCCTCCCTCCTCC 60.064 57.143 0.00 0.00 0.00 4.30
63 64 1.641192 ACCAAAAATCCCTCCCTCCTC 59.359 52.381 0.00 0.00 0.00 3.71
64 65 1.359130 CACCAAAAATCCCTCCCTCCT 59.641 52.381 0.00 0.00 0.00 3.69
65 66 1.619704 CCACCAAAAATCCCTCCCTCC 60.620 57.143 0.00 0.00 0.00 4.30
66 67 1.619704 CCCACCAAAAATCCCTCCCTC 60.620 57.143 0.00 0.00 0.00 4.30
67 68 0.413434 CCCACCAAAAATCCCTCCCT 59.587 55.000 0.00 0.00 0.00 4.20
68 69 1.264749 GCCCACCAAAAATCCCTCCC 61.265 60.000 0.00 0.00 0.00 4.30
69 70 1.264749 GGCCCACCAAAAATCCCTCC 61.265 60.000 0.00 0.00 35.26 4.30
70 71 0.544120 TGGCCCACCAAAAATCCCTC 60.544 55.000 0.00 0.00 45.37 4.30
71 72 1.551358 TGGCCCACCAAAAATCCCT 59.449 52.632 0.00 0.00 45.37 4.20
72 73 4.224105 TGGCCCACCAAAAATCCC 57.776 55.556 0.00 0.00 45.37 3.85
81 82 1.754234 CTAACTGCCATGGCCCACC 60.754 63.158 33.44 6.83 41.09 4.61
82 83 0.323360 TTCTAACTGCCATGGCCCAC 60.323 55.000 33.44 7.24 41.09 4.61
83 84 0.407528 TTTCTAACTGCCATGGCCCA 59.592 50.000 33.44 15.61 41.09 5.36
84 85 0.817654 GTTTCTAACTGCCATGGCCC 59.182 55.000 33.44 8.46 41.09 5.80
85 86 1.474077 CTGTTTCTAACTGCCATGGCC 59.526 52.381 33.44 16.23 41.09 5.36
86 87 1.474077 CCTGTTTCTAACTGCCATGGC 59.526 52.381 30.54 30.54 42.35 4.40
87 88 1.474077 GCCTGTTTCTAACTGCCATGG 59.526 52.381 7.63 7.63 0.00 3.66
88 89 2.440409 AGCCTGTTTCTAACTGCCATG 58.560 47.619 0.00 0.00 32.63 3.66
89 90 2.821969 CAAGCCTGTTTCTAACTGCCAT 59.178 45.455 0.00 0.00 32.63 4.40
90 91 2.229792 CAAGCCTGTTTCTAACTGCCA 58.770 47.619 0.00 0.00 32.63 4.92
91 92 2.030805 CACAAGCCTGTTTCTAACTGCC 60.031 50.000 0.00 0.00 31.64 4.85
92 93 2.878406 TCACAAGCCTGTTTCTAACTGC 59.122 45.455 0.00 0.00 31.64 4.40
93 94 3.058639 GCTCACAAGCCTGTTTCTAACTG 60.059 47.826 0.00 0.00 43.10 3.16
94 95 3.142174 GCTCACAAGCCTGTTTCTAACT 58.858 45.455 0.00 0.00 43.10 2.24
95 96 2.096218 CGCTCACAAGCCTGTTTCTAAC 60.096 50.000 0.00 0.00 46.34 2.34
96 97 2.143122 CGCTCACAAGCCTGTTTCTAA 58.857 47.619 0.00 0.00 46.34 2.10
97 98 1.608025 CCGCTCACAAGCCTGTTTCTA 60.608 52.381 0.00 0.00 46.34 2.10
98 99 0.886490 CCGCTCACAAGCCTGTTTCT 60.886 55.000 0.00 0.00 46.34 2.52
99 100 1.166531 ACCGCTCACAAGCCTGTTTC 61.167 55.000 0.00 0.00 46.34 2.78
100 101 1.152963 ACCGCTCACAAGCCTGTTT 60.153 52.632 0.00 0.00 46.34 2.83
101 102 1.598130 GACCGCTCACAAGCCTGTT 60.598 57.895 0.00 0.00 46.34 3.16
102 103 2.031163 GACCGCTCACAAGCCTGT 59.969 61.111 0.00 0.00 46.34 4.00
103 104 2.743928 GGACCGCTCACAAGCCTG 60.744 66.667 0.00 0.00 46.34 4.85
104 105 4.379243 CGGACCGCTCACAAGCCT 62.379 66.667 0.00 0.00 46.34 4.58
106 107 4.373116 TCCGGACCGCTCACAAGC 62.373 66.667 8.86 0.00 45.56 4.01
107 108 2.432628 GTCCGGACCGCTCACAAG 60.433 66.667 24.75 0.00 0.00 3.16
108 109 2.915659 AGTCCGGACCGCTCACAA 60.916 61.111 30.82 0.00 0.00 3.33
109 110 3.371063 GAGTCCGGACCGCTCACA 61.371 66.667 30.82 0.00 0.00 3.58
110 111 4.131088 GGAGTCCGGACCGCTCAC 62.131 72.222 30.82 14.50 0.00 3.51
121 122 2.046217 GGAGGTTTGCGGGAGTCC 60.046 66.667 0.00 0.00 0.00 3.85
122 123 2.046217 GGGAGGTTTGCGGGAGTC 60.046 66.667 0.00 0.00 0.00 3.36
123 124 3.647771 GGGGAGGTTTGCGGGAGT 61.648 66.667 0.00 0.00 0.00 3.85
124 125 3.646715 TGGGGAGGTTTGCGGGAG 61.647 66.667 0.00 0.00 0.00 4.30
125 126 3.961414 GTGGGGAGGTTTGCGGGA 61.961 66.667 0.00 0.00 0.00 5.14
126 127 3.583882 ATGTGGGGAGGTTTGCGGG 62.584 63.158 0.00 0.00 0.00 6.13
127 128 1.184970 AAATGTGGGGAGGTTTGCGG 61.185 55.000 0.00 0.00 0.00 5.69
128 129 0.038343 CAAATGTGGGGAGGTTTGCG 60.038 55.000 0.00 0.00 0.00 4.85
129 130 1.000843 GACAAATGTGGGGAGGTTTGC 59.999 52.381 0.00 0.00 35.53 3.68
130 131 2.558359 GAGACAAATGTGGGGAGGTTTG 59.442 50.000 0.00 0.00 37.52 2.93
131 132 2.176798 TGAGACAAATGTGGGGAGGTTT 59.823 45.455 0.00 0.00 0.00 3.27
132 133 1.780309 TGAGACAAATGTGGGGAGGTT 59.220 47.619 0.00 0.00 0.00 3.50
133 134 1.352352 CTGAGACAAATGTGGGGAGGT 59.648 52.381 0.00 0.00 0.00 3.85
134 135 1.340405 CCTGAGACAAATGTGGGGAGG 60.340 57.143 0.00 0.00 0.00 4.30
135 136 1.352352 ACCTGAGACAAATGTGGGGAG 59.648 52.381 0.00 0.00 0.00 4.30
136 137 1.444933 ACCTGAGACAAATGTGGGGA 58.555 50.000 0.00 0.00 0.00 4.81
137 138 2.292828 AACCTGAGACAAATGTGGGG 57.707 50.000 0.00 0.00 0.00 4.96
138 139 3.188460 CGTAAACCTGAGACAAATGTGGG 59.812 47.826 0.00 0.00 0.00 4.61
139 140 3.188460 CCGTAAACCTGAGACAAATGTGG 59.812 47.826 0.00 0.00 0.00 4.17
140 141 3.188460 CCCGTAAACCTGAGACAAATGTG 59.812 47.826 0.00 0.00 0.00 3.21
141 142 3.071892 TCCCGTAAACCTGAGACAAATGT 59.928 43.478 0.00 0.00 0.00 2.71
142 143 3.670625 TCCCGTAAACCTGAGACAAATG 58.329 45.455 0.00 0.00 0.00 2.32
143 144 3.581332 TCTCCCGTAAACCTGAGACAAAT 59.419 43.478 0.00 0.00 0.00 2.32
144 145 2.967201 TCTCCCGTAAACCTGAGACAAA 59.033 45.455 0.00 0.00 0.00 2.83
145 146 2.600790 TCTCCCGTAAACCTGAGACAA 58.399 47.619 0.00 0.00 0.00 3.18
146 147 2.297698 TCTCCCGTAAACCTGAGACA 57.702 50.000 0.00 0.00 0.00 3.41
147 148 3.672767 TTTCTCCCGTAAACCTGAGAC 57.327 47.619 0.00 0.00 33.81 3.36
148 149 3.553508 CGTTTTCTCCCGTAAACCTGAGA 60.554 47.826 0.00 0.00 32.05 3.27
149 150 2.735134 CGTTTTCTCCCGTAAACCTGAG 59.265 50.000 0.00 0.00 32.05 3.35
150 151 2.758009 CGTTTTCTCCCGTAAACCTGA 58.242 47.619 0.00 0.00 32.05 3.86
151 152 1.196127 GCGTTTTCTCCCGTAAACCTG 59.804 52.381 0.00 0.00 32.05 4.00
152 153 1.516161 GCGTTTTCTCCCGTAAACCT 58.484 50.000 0.00 0.00 32.05 3.50
153 154 0.164432 CGCGTTTTCTCCCGTAAACC 59.836 55.000 0.00 0.00 32.05 3.27
154 155 0.861185 ACGCGTTTTCTCCCGTAAAC 59.139 50.000 5.58 0.00 31.43 2.01
155 156 1.139163 GACGCGTTTTCTCCCGTAAA 58.861 50.000 15.53 0.00 33.63 2.01
156 157 0.667184 GGACGCGTTTTCTCCCGTAA 60.667 55.000 15.53 0.00 33.63 3.18
157 158 1.080569 GGACGCGTTTTCTCCCGTA 60.081 57.895 15.53 0.00 33.63 4.02
158 159 2.356673 GGACGCGTTTTCTCCCGT 60.357 61.111 15.53 0.00 36.53 5.28
159 160 3.475774 CGGACGCGTTTTCTCCCG 61.476 66.667 15.53 17.30 0.00 5.14
160 161 1.665599 TTCGGACGCGTTTTCTCCC 60.666 57.895 15.53 7.92 0.00 4.30
161 162 1.490258 GTTCGGACGCGTTTTCTCC 59.510 57.895 15.53 8.78 0.00 3.71
162 163 1.216941 TGGTTCGGACGCGTTTTCTC 61.217 55.000 15.53 0.00 0.00 2.87
163 164 1.227321 TGGTTCGGACGCGTTTTCT 60.227 52.632 15.53 0.00 0.00 2.52
164 165 1.083209 GTGGTTCGGACGCGTTTTC 60.083 57.895 15.53 5.61 0.00 2.29
165 166 2.873604 CGTGGTTCGGACGCGTTTT 61.874 57.895 15.53 0.00 35.71 2.43
166 167 3.332409 CGTGGTTCGGACGCGTTT 61.332 61.111 15.53 0.00 35.71 3.60
171 172 3.487202 CATGGCGTGGTTCGGACG 61.487 66.667 0.00 0.00 40.26 4.79
172 173 3.124921 CCATGGCGTGGTTCGGAC 61.125 66.667 17.89 0.00 43.44 4.79
180 181 1.334556 CATGTATTGGTCCATGGCGTG 59.665 52.381 6.96 0.00 35.82 5.34
181 182 1.679139 CATGTATTGGTCCATGGCGT 58.321 50.000 6.96 0.00 35.82 5.68
182 183 0.311790 GCATGTATTGGTCCATGGCG 59.688 55.000 6.96 0.00 39.06 5.69
184 185 1.331214 GGGCATGTATTGGTCCATGG 58.669 55.000 4.97 4.97 39.06 3.66
185 186 0.953727 CGGGCATGTATTGGTCCATG 59.046 55.000 0.00 0.00 41.08 3.66
186 187 0.823356 GCGGGCATGTATTGGTCCAT 60.823 55.000 0.00 0.00 0.00 3.41
187 188 1.453015 GCGGGCATGTATTGGTCCA 60.453 57.895 0.00 0.00 0.00 4.02
188 189 1.152963 AGCGGGCATGTATTGGTCC 60.153 57.895 0.00 0.00 0.00 4.46
189 190 1.498865 CGAGCGGGCATGTATTGGTC 61.499 60.000 0.00 0.00 0.00 4.02
190 191 1.523711 CGAGCGGGCATGTATTGGT 60.524 57.895 0.00 0.00 0.00 3.67
191 192 2.253758 CCGAGCGGGCATGTATTGG 61.254 63.158 0.00 0.00 0.00 3.16
192 193 0.603707 ATCCGAGCGGGCATGTATTG 60.604 55.000 9.29 0.00 34.94 1.90
193 194 0.603707 CATCCGAGCGGGCATGTATT 60.604 55.000 9.29 0.00 34.94 1.89
194 195 1.004560 CATCCGAGCGGGCATGTAT 60.005 57.895 9.29 0.00 34.94 2.29
195 196 2.131067 TCATCCGAGCGGGCATGTA 61.131 57.895 9.29 0.00 34.94 2.29
196 197 3.469970 TCATCCGAGCGGGCATGT 61.470 61.111 9.29 0.00 34.94 3.21
197 198 2.930385 AAGTCATCCGAGCGGGCATG 62.930 60.000 9.29 6.67 34.94 4.06
198 199 2.650813 GAAGTCATCCGAGCGGGCAT 62.651 60.000 9.29 0.00 34.94 4.40
199 200 3.371097 GAAGTCATCCGAGCGGGCA 62.371 63.158 9.29 0.00 34.94 5.36
200 201 2.586357 GAAGTCATCCGAGCGGGC 60.586 66.667 9.29 0.00 34.94 6.13
201 202 2.107141 GGAAGTCATCCGAGCGGG 59.893 66.667 9.29 0.00 38.79 6.13
218 219 1.205657 CCATAATCGTCCGGACAACG 58.794 55.000 32.80 20.74 41.39 4.10
226 227 3.467803 CTCAAACCTCCCATAATCGTCC 58.532 50.000 0.00 0.00 0.00 4.79
229 230 2.172717 ACCCTCAAACCTCCCATAATCG 59.827 50.000 0.00 0.00 0.00 3.34
265 266 5.871396 ACATCAACCATACGAAGATAGGT 57.129 39.130 0.00 0.00 0.00 3.08
267 268 6.863645 CCACTACATCAACCATACGAAGATAG 59.136 42.308 0.00 0.00 0.00 2.08
274 275 6.454583 CGTTAAACCACTACATCAACCATACG 60.455 42.308 0.00 0.00 0.00 3.06
287 288 7.328249 CGGTGTAGATTTTACGTTAAACCACTA 59.672 37.037 1.25 4.57 0.00 2.74
297 298 6.038356 CCAATAGTCGGTGTAGATTTTACGT 58.962 40.000 0.00 0.00 0.00 3.57
310 311 4.654262 ACATCCTATTGTCCAATAGTCGGT 59.346 41.667 20.16 13.70 45.40 4.69
313 314 7.055667 TCTGACATCCTATTGTCCAATAGTC 57.944 40.000 20.16 14.25 45.40 2.59
364 365 9.140286 CAATGATTGTTAGTAACGAAAGAGAGA 57.860 33.333 7.06 0.00 0.00 3.10
372 373 4.924462 TGCGACAATGATTGTTAGTAACGA 59.076 37.500 12.62 5.42 45.52 3.85
401 1420 8.365210 GCACATAAGTTTTACACAAAATCATCG 58.635 33.333 0.00 0.00 36.10 3.84
410 1429 5.180492 GCAGTAGGCACATAAGTTTTACACA 59.820 40.000 0.00 0.00 43.97 3.72
436 1455 9.212641 CTTCAAGGGATAATATCACACACTATG 57.787 37.037 5.21 0.00 34.29 2.23
655 1730 2.807967 CACAACGAAAGCAGGATGAGAA 59.192 45.455 0.00 0.00 39.69 2.87
664 1739 5.681337 TTGTATTGATCACAACGAAAGCA 57.319 34.783 0.00 0.00 38.90 3.91
666 1741 8.900511 ATTCATTGTATTGATCACAACGAAAG 57.099 30.769 9.25 3.20 40.27 2.62
723 1803 2.105821 TGGGGAGTGACTTTTCGATTGT 59.894 45.455 0.00 0.00 0.00 2.71
729 1809 1.420138 TGTCCTGGGGAGTGACTTTTC 59.580 52.381 0.00 0.00 29.39 2.29
854 1966 0.030638 GCAAGCGGCTGTTTTTCTGA 59.969 50.000 1.81 0.00 40.25 3.27
941 2054 2.388735 CCCTATGTGACAGCTGGTAGA 58.611 52.381 19.93 5.16 0.00 2.59
942 2055 1.202580 GCCCTATGTGACAGCTGGTAG 60.203 57.143 19.93 11.15 0.00 3.18
996 2112 5.220710 TGGGAGAGAGCATAAATAGAAGC 57.779 43.478 0.00 0.00 0.00 3.86
1051 2167 4.009675 TCTTGTGACTTTGTGTGAGCTTT 58.990 39.130 0.00 0.00 0.00 3.51
1979 3109 4.021925 GTGCCGGCCTTGAGACCT 62.022 66.667 26.77 0.00 0.00 3.85
2219 3349 8.862074 CATACATACTCGCTAGTAGTAGTAGTG 58.138 40.741 16.44 16.44 41.46 2.74
2319 3449 0.179056 GGCGATGATTCTTCCGGGAA 60.179 55.000 9.52 9.52 0.00 3.97
2397 3532 4.098654 TCTGACAAGCTACAATCCTCTAGC 59.901 45.833 0.00 0.00 36.40 3.42
2428 3568 5.247110 AGTTCACAACCATGATGACTAGAGT 59.753 40.000 0.00 0.00 0.00 3.24
2438 3578 3.486383 GGAGGAAAGTTCACAACCATGA 58.514 45.455 0.00 0.00 0.00 3.07
2453 3593 1.372501 CAAAAGAGGGGAGGGAGGAA 58.627 55.000 0.00 0.00 0.00 3.36
2589 3734 2.432510 GGTCTGGACAGAACTATGGAGG 59.567 54.545 10.02 0.00 41.81 4.30
2777 3922 4.694339 GAGTACCAATTGAATAGGACGCT 58.306 43.478 7.12 0.00 0.00 5.07
2902 4066 1.244816 CGGATGTGGACGGATAGCTA 58.755 55.000 0.00 0.00 0.00 3.32
2915 4079 0.613777 GTGGGAGGAGAAACGGATGT 59.386 55.000 0.00 0.00 0.00 3.06
2965 4129 0.828022 ATAATCGGTGGCGACCTCAA 59.172 50.000 16.47 1.69 40.58 3.02
3018 4182 0.179084 GCGTGCTAGTAGATGGGCAA 60.179 55.000 0.00 0.00 36.43 4.52
3019 4183 1.326951 TGCGTGCTAGTAGATGGGCA 61.327 55.000 0.00 1.63 0.00 5.36
3020 4184 0.876342 GTGCGTGCTAGTAGATGGGC 60.876 60.000 0.00 0.00 0.00 5.36
3021 4185 0.595053 CGTGCGTGCTAGTAGATGGG 60.595 60.000 0.00 0.00 0.00 4.00
3022 4186 0.595053 CCGTGCGTGCTAGTAGATGG 60.595 60.000 0.00 0.00 0.00 3.51
3023 4187 1.209275 GCCGTGCGTGCTAGTAGATG 61.209 60.000 0.00 0.00 0.00 2.90
3024 4188 1.065928 GCCGTGCGTGCTAGTAGAT 59.934 57.895 0.00 0.00 0.00 1.98
3025 4189 2.488355 GCCGTGCGTGCTAGTAGA 59.512 61.111 0.00 0.00 0.00 2.59
3026 4190 2.582498 GGCCGTGCGTGCTAGTAG 60.582 66.667 0.00 0.00 0.00 2.57
3027 4191 4.137872 GGGCCGTGCGTGCTAGTA 62.138 66.667 0.00 0.00 0.00 1.82
3037 4201 1.814527 GGTACAGTAGAGGGCCGTG 59.185 63.158 0.65 0.00 0.00 4.94
3047 4211 7.984391 TCACGATAATAAAAGTCGGTACAGTA 58.016 34.615 0.00 0.00 39.53 2.74
3054 4218 4.690122 ACCCTCACGATAATAAAAGTCGG 58.310 43.478 0.00 0.00 39.53 4.79
3057 4221 5.424252 TCAGGACCCTCACGATAATAAAAGT 59.576 40.000 0.00 0.00 0.00 2.66
3073 4237 4.208686 CTAGCGGCGTCAGGACCC 62.209 72.222 9.37 0.00 0.00 4.46
3074 4238 4.208686 CCTAGCGGCGTCAGGACC 62.209 72.222 19.98 0.00 0.00 4.46
3075 4239 3.003113 AACCTAGCGGCGTCAGGAC 62.003 63.158 27.91 4.02 33.44 3.85
3076 4240 2.678934 AACCTAGCGGCGTCAGGA 60.679 61.111 27.91 2.66 33.44 3.86
3077 4241 2.509336 CAACCTAGCGGCGTCAGG 60.509 66.667 22.07 22.07 35.45 3.86
3078 4242 3.188786 GCAACCTAGCGGCGTCAG 61.189 66.667 9.37 5.80 0.00 3.51
3079 4243 3.691342 AGCAACCTAGCGGCGTCA 61.691 61.111 9.37 0.00 40.15 4.35
3121 4293 1.304381 ACGTTGCCCATGCCAAGAT 60.304 52.632 0.00 0.00 36.33 2.40
3149 4321 4.231439 GATACCCGTGCGTCCCCC 62.231 72.222 0.00 0.00 0.00 5.40
3162 4336 2.628106 CGCAGCATGGCACGATAC 59.372 61.111 0.00 0.00 35.86 2.24
3192 4366 1.332178 GATCGTCCTCGCAATCGATC 58.668 55.000 0.00 9.86 46.78 3.69
3234 4408 3.381335 AGAATGTGGTAATCGGTAGGGT 58.619 45.455 0.00 0.00 0.00 4.34
3235 4409 3.386726 TGAGAATGTGGTAATCGGTAGGG 59.613 47.826 0.00 0.00 0.00 3.53
3236 4410 4.099573 ACTGAGAATGTGGTAATCGGTAGG 59.900 45.833 0.00 0.00 0.00 3.18
3237 4411 5.043903 CACTGAGAATGTGGTAATCGGTAG 58.956 45.833 0.00 0.00 0.00 3.18
3238 4412 4.707934 TCACTGAGAATGTGGTAATCGGTA 59.292 41.667 0.00 0.00 36.21 4.02
3239 4413 3.513912 TCACTGAGAATGTGGTAATCGGT 59.486 43.478 0.00 0.00 36.21 4.69
3240 4414 4.123497 TCACTGAGAATGTGGTAATCGG 57.877 45.455 0.00 0.00 36.21 4.18
3241 4415 6.045318 AGATTCACTGAGAATGTGGTAATCG 58.955 40.000 5.04 0.00 46.76 3.34
3263 4440 3.354948 AACATACATCAAGCTGGCAGA 57.645 42.857 20.86 0.00 0.00 4.26
3286 4463 6.409524 AAAGCAATCCAAACTTGATGAGAA 57.590 33.333 0.00 0.00 0.00 2.87
3288 4465 5.166398 GGAAAGCAATCCAAACTTGATGAG 58.834 41.667 3.10 0.00 39.42 2.90
3289 4466 4.588106 TGGAAAGCAATCCAAACTTGATGA 59.412 37.500 7.94 0.00 46.36 2.92
3290 4467 4.885413 TGGAAAGCAATCCAAACTTGATG 58.115 39.130 7.94 0.00 46.36 3.07
3306 4483 2.224621 ACCAGGTGACACTCATGGAAAG 60.225 50.000 23.16 5.68 34.99 2.62
3310 4487 1.406069 GCTACCAGGTGACACTCATGG 60.406 57.143 17.84 17.84 37.07 3.66
3311 4488 1.552337 AGCTACCAGGTGACACTCATG 59.448 52.381 0.76 2.61 0.00 3.07
3312 4489 1.944177 AGCTACCAGGTGACACTCAT 58.056 50.000 0.76 0.00 0.00 2.90
3313 4490 1.344438 CAAGCTACCAGGTGACACTCA 59.656 52.381 0.76 0.00 0.00 3.41
3314 4491 1.618837 TCAAGCTACCAGGTGACACTC 59.381 52.381 0.76 0.00 0.00 3.51
3315 4492 1.717032 TCAAGCTACCAGGTGACACT 58.283 50.000 0.76 0.00 0.00 3.55
3316 4493 2.289694 ACATCAAGCTACCAGGTGACAC 60.290 50.000 0.76 0.00 0.00 3.67
3317 4494 1.977854 ACATCAAGCTACCAGGTGACA 59.022 47.619 0.76 0.00 0.00 3.58
3318 4495 2.770164 ACATCAAGCTACCAGGTGAC 57.230 50.000 0.76 0.00 0.00 3.67
3319 4496 3.774766 ACATACATCAAGCTACCAGGTGA 59.225 43.478 0.76 0.00 0.00 4.02
3320 4497 4.142609 ACATACATCAAGCTACCAGGTG 57.857 45.455 0.76 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.