Multiple sequence alignment - TraesCS4B01G085100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G085100 chr4B 100.000 4698 0 0 1 4698 85585884 85581187 0.000000e+00 8676.0
1 TraesCS4B01G085100 chr4B 90.710 549 25 4 4150 4698 537472281 537472803 0.000000e+00 708.0
2 TraesCS4B01G085100 chr4D 92.739 4063 167 54 1 3995 56950734 56946732 0.000000e+00 5751.0
3 TraesCS4B01G085100 chr4A 93.890 2504 111 18 1584 4073 540015143 540017618 0.000000e+00 3738.0
4 TraesCS4B01G085100 chr4A 90.470 1511 77 38 1 1475 540013433 540014912 0.000000e+00 1930.0
5 TraesCS4B01G085100 chr4A 95.349 1118 42 6 1795 2910 540081807 540082916 0.000000e+00 1768.0
6 TraesCS4B01G085100 chr4A 95.349 1118 42 5 1795 2910 540084030 540085139 0.000000e+00 1768.0
7 TraesCS4B01G085100 chr4A 95.259 1118 43 5 1795 2910 540086234 540087343 0.000000e+00 1762.0
8 TraesCS4B01G085100 chr4A 94.991 1118 45 6 1795 2910 540082919 540084027 0.000000e+00 1744.0
9 TraesCS4B01G085100 chr4A 93.381 1118 44 11 1795 2910 540085142 540086231 0.000000e+00 1628.0
10 TraesCS4B01G085100 chr4A 94.651 916 39 6 1795 2708 540080172 540081079 0.000000e+00 1411.0
11 TraesCS4B01G085100 chr4A 95.712 723 21 5 2190 2910 540081090 540081804 0.000000e+00 1155.0
12 TraesCS4B01G085100 chr4A 95.852 675 27 1 3179 3853 540087494 540088167 0.000000e+00 1090.0
13 TraesCS4B01G085100 chr4A 90.222 225 15 5 3849 4071 540093690 540093909 2.140000e-73 287.0
14 TraesCS4B01G085100 chr4A 98.131 107 2 0 1795 1901 540087346 540087452 2.230000e-43 187.0
15 TraesCS4B01G085100 chr4A 100.000 40 0 0 1538 1577 540015015 540015054 1.810000e-09 75.0
16 TraesCS4B01G085100 chr6B 92.540 563 28 3 4150 4698 26649482 26648920 0.000000e+00 795.0
17 TraesCS4B01G085100 chr6B 91.887 567 25 9 4150 4698 324823793 324824356 0.000000e+00 773.0
18 TraesCS4B01G085100 chr6B 93.692 428 17 6 4277 4698 241582378 241581955 2.390000e-177 632.0
19 TraesCS4B01G085100 chr6B 88.350 103 12 0 4150 4252 660710855 660710957 1.780000e-24 124.0
20 TraesCS4B01G085100 chr3B 91.826 575 22 12 4146 4698 85629144 85628573 0.000000e+00 778.0
21 TraesCS4B01G085100 chr3B 90.052 573 30 10 4147 4698 221819959 221819393 0.000000e+00 717.0
22 TraesCS4B01G085100 chr3B 81.579 152 13 9 4003 4146 691503964 691503820 1.380000e-20 111.0
23 TraesCS4B01G085100 chr3B 95.000 40 2 0 4147 4186 418898474 418898513 3.920000e-06 63.9
24 TraesCS4B01G085100 chr5B 91.534 567 24 8 4150 4695 704414002 704414565 0.000000e+00 760.0
25 TraesCS4B01G085100 chr5B 89.965 568 31 10 4150 4698 711857745 711857185 0.000000e+00 710.0
26 TraesCS4B01G085100 chr5B 89.279 569 23 7 4146 4698 527782647 527782101 0.000000e+00 678.0
27 TraesCS4B01G085100 chr5B 90.196 51 0 3 4143 4188 529335979 529336029 1.410000e-05 62.1
28 TraesCS4B01G085100 chr2B 91.388 569 24 7 4150 4698 51099281 51099844 0.000000e+00 756.0
29 TraesCS4B01G085100 chr1B 89.529 573 31 10 4147 4698 638422596 638423160 0.000000e+00 699.0
30 TraesCS4B01G085100 chr1D 82.353 153 16 7 4000 4146 5156304 5156157 6.380000e-24 122.0
31 TraesCS4B01G085100 chr2A 85.455 110 15 1 4148 4257 744776281 744776389 3.840000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G085100 chr4B 85581187 85585884 4697 True 8676.000000 8676 100.000000 1 4698 1 chr4B.!!$R1 4697
1 TraesCS4B01G085100 chr4B 537472281 537472803 522 False 708.000000 708 90.710000 4150 4698 1 chr4B.!!$F1 548
2 TraesCS4B01G085100 chr4D 56946732 56950734 4002 True 5751.000000 5751 92.739000 1 3995 1 chr4D.!!$R1 3994
3 TraesCS4B01G085100 chr4A 540013433 540017618 4185 False 1914.333333 3738 94.786667 1 4073 3 chr4A.!!$F2 4072
4 TraesCS4B01G085100 chr4A 540080172 540088167 7995 False 1390.333333 1768 95.408333 1795 3853 9 chr4A.!!$F3 2058
5 TraesCS4B01G085100 chr6B 26648920 26649482 562 True 795.000000 795 92.540000 4150 4698 1 chr6B.!!$R1 548
6 TraesCS4B01G085100 chr6B 324823793 324824356 563 False 773.000000 773 91.887000 4150 4698 1 chr6B.!!$F1 548
7 TraesCS4B01G085100 chr3B 85628573 85629144 571 True 778.000000 778 91.826000 4146 4698 1 chr3B.!!$R1 552
8 TraesCS4B01G085100 chr3B 221819393 221819959 566 True 717.000000 717 90.052000 4147 4698 1 chr3B.!!$R2 551
9 TraesCS4B01G085100 chr5B 704414002 704414565 563 False 760.000000 760 91.534000 4150 4695 1 chr5B.!!$F2 545
10 TraesCS4B01G085100 chr5B 711857185 711857745 560 True 710.000000 710 89.965000 4150 4698 1 chr5B.!!$R2 548
11 TraesCS4B01G085100 chr5B 527782101 527782647 546 True 678.000000 678 89.279000 4146 4698 1 chr5B.!!$R1 552
12 TraesCS4B01G085100 chr2B 51099281 51099844 563 False 756.000000 756 91.388000 4150 4698 1 chr2B.!!$F1 548
13 TraesCS4B01G085100 chr1B 638422596 638423160 564 False 699.000000 699 89.529000 4147 4698 1 chr1B.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
555 591 0.387622 CATGTCCAAAAGCCTGCACG 60.388 55.000 0.0 0.0 0.00 5.34 F
686 729 1.153168 AAACTGACACGCACAGGCT 60.153 52.632 0.0 0.0 39.38 4.58 F
2162 2372 0.109086 AGGATGCAGAACACGTCGAG 60.109 55.000 0.0 0.0 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1751 1961 0.603065 AGGAAGCCGGCAAAAATGAC 59.397 50.000 31.54 9.42 0.00 3.06 R
2446 3769 2.054799 ACCTAGCAAGACAAGGACCAA 58.945 47.619 0.00 0.00 34.34 3.67 R
4102 8627 0.107017 CTGCTCCGGGTTCCATGATT 60.107 55.000 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 25 2.307098 CCCTTGGATTCCAGTGAGTTCT 59.693 50.000 5.36 0.00 33.81 3.01
72 75 6.695278 GGTGAGTCGAATTTCTTCTCTGATAG 59.305 42.308 14.26 0.00 0.00 2.08
192 203 3.211865 ACTATACGATCAGGAGTCGCAA 58.788 45.455 0.00 0.00 42.56 4.85
217 228 3.487711 CGATCGACGATGAAGAGTTCCTT 60.488 47.826 16.49 0.00 45.77 3.36
221 232 3.741344 CGACGATGAAGAGTTCCTTTTGT 59.259 43.478 0.00 0.00 34.68 2.83
225 236 7.517734 CGACGATGAAGAGTTCCTTTTGTAAAA 60.518 37.037 0.00 0.00 34.68 1.52
226 237 7.992008 ACGATGAAGAGTTCCTTTTGTAAAAA 58.008 30.769 0.00 0.00 34.68 1.94
251 272 8.095452 ACTGAATTAATACTTGTGATCCTCCT 57.905 34.615 0.00 0.00 0.00 3.69
262 295 2.297033 GTGATCCTCCTTTTGCTTTGCA 59.703 45.455 0.00 0.00 36.47 4.08
272 305 4.142425 CCTTTTGCTTTGCATGTTTTTGGT 60.142 37.500 0.00 0.00 38.76 3.67
474 510 5.617751 GCATGTAAATTGCCATATCTCCGAC 60.618 44.000 0.00 0.00 33.95 4.79
515 551 6.132791 TCTAGAAGAACGGTGCAGTAATAG 57.867 41.667 0.00 0.00 0.00 1.73
516 552 4.803098 AGAAGAACGGTGCAGTAATAGT 57.197 40.909 0.00 0.00 0.00 2.12
517 553 5.909621 AGAAGAACGGTGCAGTAATAGTA 57.090 39.130 0.00 0.00 0.00 1.82
519 555 7.578310 AGAAGAACGGTGCAGTAATAGTATA 57.422 36.000 0.00 0.00 0.00 1.47
555 591 0.387622 CATGTCCAAAAGCCTGCACG 60.388 55.000 0.00 0.00 0.00 5.34
590 629 5.873179 TCAGAAACCGGTAATTAAAGCTG 57.127 39.130 8.00 3.31 0.00 4.24
686 729 1.153168 AAACTGACACGCACAGGCT 60.153 52.632 0.00 0.00 39.38 4.58
813 865 1.762370 TGGAAAGCACTCACTCACTGA 59.238 47.619 0.00 0.00 0.00 3.41
873 925 6.887626 ATCTAGTCGGGTTCTATCTTCTTC 57.112 41.667 0.00 0.00 0.00 2.87
905 957 6.114187 TGCTTTTGGTCTCTTCTTCTGATA 57.886 37.500 0.00 0.00 0.00 2.15
1090 1148 2.032528 CGGGAGCTCAGGCACAAA 59.967 61.111 17.19 0.00 41.70 2.83
1188 1247 9.777575 CTCATGAAAAAGCTTCAAAATGTTTTT 57.222 25.926 0.00 0.00 33.98 1.94
1235 1294 3.769739 AAGTGTGCCTCTGATGTGTTA 57.230 42.857 0.00 0.00 0.00 2.41
1434 1493 6.062095 ACAAGCATTACTGGAGTGTAAGTTT 58.938 36.000 0.00 0.00 36.10 2.66
1467 1526 9.076781 TCTCTATCTGAATACAATCTGAAGAGG 57.923 37.037 14.96 0.00 35.80 3.69
1522 1581 2.876550 ACTTGCGGACAAAAGAACTACC 59.123 45.455 0.00 0.00 34.74 3.18
1523 1582 2.623878 TGCGGACAAAAGAACTACCA 57.376 45.000 0.00 0.00 0.00 3.25
1524 1583 2.215196 TGCGGACAAAAGAACTACCAC 58.785 47.619 0.00 0.00 0.00 4.16
1528 1587 4.554134 GCGGACAAAAGAACTACCACTTTC 60.554 45.833 0.00 0.00 35.66 2.62
1654 1863 3.411446 GGAAACCATATGCATCCATCGA 58.589 45.455 0.19 0.00 32.85 3.59
1675 1885 6.472887 TCGAGGATTAAAACTGATTGTCCTT 58.527 36.000 0.00 0.00 34.91 3.36
1676 1886 6.371548 TCGAGGATTAAAACTGATTGTCCTTG 59.628 38.462 0.00 0.00 37.20 3.61
1677 1887 6.149474 CGAGGATTAAAACTGATTGTCCTTGT 59.851 38.462 0.00 0.00 34.91 3.16
1678 1888 7.219484 AGGATTAAAACTGATTGTCCTTGTG 57.781 36.000 0.00 0.00 30.80 3.33
1681 1891 7.926018 GGATTAAAACTGATTGTCCTTGTGTTT 59.074 33.333 0.00 0.00 0.00 2.83
1682 1892 9.959749 GATTAAAACTGATTGTCCTTGTGTTTA 57.040 29.630 0.00 0.00 0.00 2.01
1751 1961 3.384146 TGCATTATGGCTTATTGGTGGTG 59.616 43.478 0.00 0.00 34.04 4.17
1762 1972 2.611225 TTGGTGGTGTCATTTTTGCC 57.389 45.000 0.00 0.00 0.00 4.52
1780 1990 1.003355 CGGCTTCCTTCTTGCCTCA 60.003 57.895 0.00 0.00 44.09 3.86
1793 2003 6.239120 CCTTCTTGCCTCAAAGATTTTCTTCA 60.239 38.462 0.00 0.00 35.27 3.02
1918 2128 1.797025 AAGTTTCAGCTCAGCGGTAC 58.203 50.000 0.00 0.00 0.00 3.34
1953 2163 5.195185 TCTCACATGATATGCAACCATTGT 58.805 37.500 0.00 0.00 32.85 2.71
1968 2178 6.931840 GCAACCATTGTAAACCCAAAAATCTA 59.068 34.615 0.00 0.00 0.00 1.98
1969 2179 7.442666 GCAACCATTGTAAACCCAAAAATCTAA 59.557 33.333 0.00 0.00 0.00 2.10
1982 2192 8.088365 ACCCAAAAATCTAAGTAGAAATGTTGC 58.912 33.333 0.00 0.00 35.69 4.17
2048 2258 2.266055 GCTTCAGGGCGCTGTACT 59.734 61.111 27.76 0.00 0.00 2.73
2156 2366 2.681848 CCATTGAGAGGATGCAGAACAC 59.318 50.000 0.00 0.00 0.00 3.32
2157 2367 2.084610 TTGAGAGGATGCAGAACACG 57.915 50.000 0.00 0.00 0.00 4.49
2162 2372 0.109086 AGGATGCAGAACACGTCGAG 60.109 55.000 0.00 0.00 0.00 4.04
2303 3624 5.072741 AGGCATCAACACATTGTAAGAACT 58.927 37.500 0.00 0.00 37.11 3.01
2366 3689 7.976734 AGTAGTTCTCGAATCTTATGAAACCTG 59.023 37.037 0.00 0.00 0.00 4.00
2383 3706 6.269538 TGAAACCTGAAAATCATCATGGGAAA 59.730 34.615 0.00 0.00 0.00 3.13
2446 3769 1.670087 CCGTGACGCTGAATCTTGTCT 60.670 52.381 0.00 0.00 32.64 3.41
2589 3915 3.510360 TCTGAGGCTACAGAAGTTGTACC 59.490 47.826 12.32 0.00 42.79 3.34
3061 7386 1.153289 CGTGAAGCAGCTGGGCTAT 60.153 57.895 17.12 0.00 45.07 2.97
3166 7681 3.117663 TCCCTCAGGTAAACAAACAAGCT 60.118 43.478 0.00 0.00 0.00 3.74
3167 7682 3.253432 CCCTCAGGTAAACAAACAAGCTC 59.747 47.826 0.00 0.00 0.00 4.09
3169 7684 2.875933 TCAGGTAAACAAACAAGCTCCG 59.124 45.455 0.00 0.00 0.00 4.63
3170 7685 2.616842 CAGGTAAACAAACAAGCTCCGT 59.383 45.455 0.00 0.00 0.00 4.69
3174 7689 1.092921 AACAAACAAGCTCCGTCGCA 61.093 50.000 0.00 0.00 0.00 5.10
3175 7690 1.092921 ACAAACAAGCTCCGTCGCAA 61.093 50.000 0.00 0.00 0.00 4.85
3208 7732 5.819991 ACCAAAGCATCTGAAGAGGAAATA 58.180 37.500 0.00 0.00 0.00 1.40
3220 7744 8.144478 TCTGAAGAGGAAATATAATCTTGACGG 58.856 37.037 0.00 0.00 32.31 4.79
3239 7763 1.133790 GGCATGGCACTGATTGTTCTC 59.866 52.381 15.47 0.00 0.00 2.87
3287 7811 1.285950 CTGACGTGCTCGGAGTTGA 59.714 57.895 13.32 0.00 41.85 3.18
3903 8427 6.578023 CAGTCTTGGTATAGGAGAGGAAAAG 58.422 44.000 0.00 0.00 0.00 2.27
3942 8467 5.197451 TCCTGTATATGACCGGCAAAAATT 58.803 37.500 0.00 0.00 32.57 1.82
3944 8469 6.261381 TCCTGTATATGACCGGCAAAAATTAC 59.739 38.462 0.00 0.00 32.57 1.89
4013 8538 8.388103 TCTTACAAGAGACTTTTTCTTTTCACG 58.612 33.333 0.00 0.00 33.22 4.35
4014 8539 6.737254 ACAAGAGACTTTTTCTTTTCACGA 57.263 33.333 0.00 0.00 33.22 4.35
4015 8540 7.141100 ACAAGAGACTTTTTCTTTTCACGAA 57.859 32.000 0.00 0.00 33.22 3.85
4016 8541 7.762382 ACAAGAGACTTTTTCTTTTCACGAAT 58.238 30.769 0.00 0.00 33.22 3.34
4017 8542 8.889717 ACAAGAGACTTTTTCTTTTCACGAATA 58.110 29.630 0.00 0.00 33.22 1.75
4018 8543 9.159470 CAAGAGACTTTTTCTTTTCACGAATAC 57.841 33.333 0.00 0.00 33.22 1.89
4019 8544 7.564988 AGAGACTTTTTCTTTTCACGAATACG 58.435 34.615 0.00 0.00 39.17 3.06
4020 8545 6.134061 AGACTTTTTCTTTTCACGAATACGC 58.866 36.000 0.00 0.00 43.96 4.42
4022 8547 6.259638 ACTTTTTCTTTTCACGAATACGCAA 58.740 32.000 0.00 0.00 43.96 4.85
4023 8548 6.748198 ACTTTTTCTTTTCACGAATACGCAAA 59.252 30.769 0.00 0.00 43.96 3.68
4024 8549 6.726035 TTTTCTTTTCACGAATACGCAAAG 57.274 33.333 0.00 0.00 43.96 2.77
4025 8550 3.805823 TCTTTTCACGAATACGCAAAGC 58.194 40.909 0.00 0.00 43.96 3.51
4026 8551 3.496884 TCTTTTCACGAATACGCAAAGCT 59.503 39.130 0.00 0.00 43.96 3.74
4027 8552 3.889196 TTTCACGAATACGCAAAGCTT 57.111 38.095 0.00 0.00 43.96 3.74
4028 8553 2.873170 TCACGAATACGCAAAGCTTG 57.127 45.000 0.00 0.00 43.96 4.01
4029 8554 1.463056 TCACGAATACGCAAAGCTTGG 59.537 47.619 0.00 0.00 43.96 3.61
4030 8555 0.168128 ACGAATACGCAAAGCTTGGC 59.832 50.000 16.37 16.37 43.96 4.52
4073 8598 8.918961 AATAAAAGAGAATGACTACGACAGAG 57.081 34.615 0.00 0.00 0.00 3.35
4074 8599 4.974368 AAGAGAATGACTACGACAGAGG 57.026 45.455 0.00 0.00 0.00 3.69
4075 8600 3.283751 AGAGAATGACTACGACAGAGGG 58.716 50.000 0.00 0.00 0.00 4.30
4076 8601 3.018149 GAGAATGACTACGACAGAGGGT 58.982 50.000 0.00 0.00 0.00 4.34
4077 8602 4.080469 AGAGAATGACTACGACAGAGGGTA 60.080 45.833 0.00 0.00 0.00 3.69
4078 8603 3.946558 AGAATGACTACGACAGAGGGTAC 59.053 47.826 0.00 0.00 0.00 3.34
4079 8604 2.865119 TGACTACGACAGAGGGTACA 57.135 50.000 0.00 0.00 0.00 2.90
4080 8605 3.361281 TGACTACGACAGAGGGTACAT 57.639 47.619 0.00 0.00 0.00 2.29
4081 8606 3.014623 TGACTACGACAGAGGGTACATG 58.985 50.000 0.00 0.00 0.00 3.21
4082 8607 3.276857 GACTACGACAGAGGGTACATGA 58.723 50.000 0.00 0.00 0.00 3.07
4083 8608 3.015327 ACTACGACAGAGGGTACATGAC 58.985 50.000 0.00 0.00 0.00 3.06
4084 8609 1.919240 ACGACAGAGGGTACATGACA 58.081 50.000 0.00 0.00 0.00 3.58
4085 8610 2.457598 ACGACAGAGGGTACATGACAT 58.542 47.619 0.00 0.00 0.00 3.06
4086 8611 2.166459 ACGACAGAGGGTACATGACATG 59.834 50.000 14.02 14.02 0.00 3.21
4087 8612 2.427095 CGACAGAGGGTACATGACATGA 59.573 50.000 22.19 3.13 0.00 3.07
4088 8613 3.119137 CGACAGAGGGTACATGACATGAA 60.119 47.826 22.19 0.00 0.00 2.57
4089 8614 4.184629 GACAGAGGGTACATGACATGAAC 58.815 47.826 22.19 10.62 0.00 3.18
4090 8615 3.190079 CAGAGGGTACATGACATGAACG 58.810 50.000 22.19 0.00 0.00 3.95
4091 8616 1.933853 GAGGGTACATGACATGAACGC 59.066 52.381 22.19 8.25 0.00 4.84
4092 8617 1.014352 GGGTACATGACATGAACGCC 58.986 55.000 22.19 15.49 0.00 5.68
4093 8618 1.677518 GGGTACATGACATGAACGCCA 60.678 52.381 22.19 0.00 0.00 5.69
4094 8619 2.080693 GGTACATGACATGAACGCCAA 58.919 47.619 22.19 0.00 0.00 4.52
4095 8620 2.486203 GGTACATGACATGAACGCCAAA 59.514 45.455 22.19 0.00 0.00 3.28
4096 8621 2.995466 ACATGACATGAACGCCAAAG 57.005 45.000 22.19 0.00 0.00 2.77
4097 8622 1.541147 ACATGACATGAACGCCAAAGG 59.459 47.619 22.19 0.00 0.00 3.11
4098 8623 1.135315 CATGACATGAACGCCAAAGGG 60.135 52.381 10.03 0.00 37.18 3.95
4112 8637 4.326504 CCAAAGGGCATAATCATGGAAC 57.673 45.455 0.00 0.00 32.36 3.62
4113 8638 3.070015 CCAAAGGGCATAATCATGGAACC 59.930 47.826 0.00 0.00 32.36 3.62
4114 8639 2.683211 AGGGCATAATCATGGAACCC 57.317 50.000 0.00 0.00 34.02 4.11
4115 8640 1.202927 AGGGCATAATCATGGAACCCG 60.203 52.381 0.00 0.00 37.17 5.28
4116 8641 1.247567 GGCATAATCATGGAACCCGG 58.752 55.000 0.00 0.00 32.36 5.73
4117 8642 1.202879 GGCATAATCATGGAACCCGGA 60.203 52.381 0.73 0.00 32.36 5.14
4118 8643 2.154462 GCATAATCATGGAACCCGGAG 58.846 52.381 0.73 0.00 32.36 4.63
4119 8644 2.154462 CATAATCATGGAACCCGGAGC 58.846 52.381 0.73 0.00 0.00 4.70
4120 8645 1.208706 TAATCATGGAACCCGGAGCA 58.791 50.000 0.73 0.00 0.00 4.26
4121 8646 0.107017 AATCATGGAACCCGGAGCAG 60.107 55.000 0.73 0.00 0.00 4.24
4122 8647 0.982852 ATCATGGAACCCGGAGCAGA 60.983 55.000 0.73 0.00 0.00 4.26
4123 8648 1.153289 CATGGAACCCGGAGCAGAG 60.153 63.158 0.73 0.00 0.00 3.35
4124 8649 1.306141 ATGGAACCCGGAGCAGAGA 60.306 57.895 0.73 0.00 0.00 3.10
4125 8650 1.333636 ATGGAACCCGGAGCAGAGAG 61.334 60.000 0.73 0.00 0.00 3.20
4126 8651 1.682684 GGAACCCGGAGCAGAGAGA 60.683 63.158 0.73 0.00 0.00 3.10
4127 8652 1.513622 GAACCCGGAGCAGAGAGAC 59.486 63.158 0.73 0.00 0.00 3.36
4128 8653 1.228894 AACCCGGAGCAGAGAGACA 60.229 57.895 0.73 0.00 0.00 3.41
4129 8654 0.832135 AACCCGGAGCAGAGAGACAA 60.832 55.000 0.73 0.00 0.00 3.18
4130 8655 1.254284 ACCCGGAGCAGAGAGACAAG 61.254 60.000 0.73 0.00 0.00 3.16
4131 8656 1.515020 CCGGAGCAGAGAGACAAGG 59.485 63.158 0.00 0.00 0.00 3.61
4132 8657 1.515020 CGGAGCAGAGAGACAAGGG 59.485 63.158 0.00 0.00 0.00 3.95
4133 8658 0.967887 CGGAGCAGAGAGACAAGGGA 60.968 60.000 0.00 0.00 0.00 4.20
4134 8659 1.494960 GGAGCAGAGAGACAAGGGAT 58.505 55.000 0.00 0.00 0.00 3.85
4135 8660 1.138661 GGAGCAGAGAGACAAGGGATG 59.861 57.143 0.00 0.00 0.00 3.51
4137 8662 2.235898 GAGCAGAGAGACAAGGGATGTT 59.764 50.000 0.00 0.00 44.12 2.71
4138 8663 2.235898 AGCAGAGAGACAAGGGATGTTC 59.764 50.000 0.00 0.00 44.12 3.18
4139 8664 2.027745 GCAGAGAGACAAGGGATGTTCA 60.028 50.000 0.00 0.00 44.12 3.18
4140 8665 3.557898 GCAGAGAGACAAGGGATGTTCAA 60.558 47.826 0.00 0.00 44.12 2.69
4141 8666 3.999663 CAGAGAGACAAGGGATGTTCAAC 59.000 47.826 0.00 0.00 44.12 3.18
4142 8667 3.008485 AGAGAGACAAGGGATGTTCAACC 59.992 47.826 0.00 0.00 44.12 3.77
4143 8668 2.040412 AGAGACAAGGGATGTTCAACCC 59.960 50.000 9.68 9.68 44.12 4.11
4422 8991 5.537188 TGAATAAAAGTTCATGCCCACAAC 58.463 37.500 0.00 0.00 33.41 3.32
4484 9053 7.701924 TCAAATGCAAACTAAAGTTCAAGACAG 59.298 33.333 0.00 0.00 37.25 3.51
4511 9087 5.583854 CACATCAATCTTCATCTTCCTCGTT 59.416 40.000 0.00 0.00 0.00 3.85
4619 9195 1.234615 CCGACGGTGTTGGCAAGATT 61.235 55.000 5.48 0.00 29.56 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 25 5.126067 CCCAAGAACTCAAGAACAAGAGAA 58.874 41.667 0.00 0.00 35.83 2.87
81 90 7.540474 ACTCTCACTTCAGGTAAGAAATACA 57.460 36.000 0.00 0.00 38.67 2.29
93 102 6.325919 AGAACAGAGTAACTCTCACTTCAG 57.674 41.667 0.00 0.00 44.98 3.02
101 110 4.284746 CCCAGGAAAGAACAGAGTAACTCT 59.715 45.833 0.00 0.00 42.11 3.24
176 185 0.388649 GTGTTGCGACTCCTGATCGT 60.389 55.000 5.50 0.00 41.68 3.73
177 186 1.406219 CGTGTTGCGACTCCTGATCG 61.406 60.000 5.50 0.00 44.77 3.69
192 203 1.738350 ACTCTTCATCGTCGATCGTGT 59.262 47.619 15.94 1.76 40.80 4.49
202 213 8.129211 AGTTTTTACAAAAGGAACTCTTCATCG 58.871 33.333 0.00 0.00 38.49 3.84
225 236 8.552296 AGGAGGATCACAAGTATTAATTCAGTT 58.448 33.333 0.00 0.00 36.25 3.16
226 237 8.095452 AGGAGGATCACAAGTATTAATTCAGT 57.905 34.615 0.00 0.00 36.25 3.41
251 272 5.382618 AACCAAAAACATGCAAAGCAAAA 57.617 30.435 0.00 0.00 43.62 2.44
288 321 1.003112 AAATGCACCGGCGTCCTTA 60.003 52.632 6.01 0.00 45.35 2.69
474 510 4.767409 TCTAGATAACGATGGATCCTGGTG 59.233 45.833 14.23 2.84 0.00 4.17
516 552 9.502091 GGACATGCCATTAATTTGAGTACTATA 57.498 33.333 0.00 0.00 36.34 1.31
517 553 7.998383 TGGACATGCCATTAATTTGAGTACTAT 59.002 33.333 0.00 0.00 43.33 2.12
519 555 6.186957 TGGACATGCCATTAATTTGAGTACT 58.813 36.000 0.00 0.00 43.33 2.73
555 591 4.201724 CCGGTTTCTGATTCAGACGAAATC 60.202 45.833 20.51 11.45 40.46 2.17
686 729 4.100498 TGCAGCACAGATATCTCATCTTCA 59.900 41.667 1.03 0.00 0.00 3.02
813 865 1.003580 ACAATCCGCAGATCAACCTGT 59.996 47.619 0.00 0.00 36.57 4.00
873 925 2.094675 AGACCAAAAGCAATGGATCCG 58.905 47.619 7.39 0.00 40.56 4.18
905 957 5.600069 AGAAGAAGAAACCAAAAGGCATTCT 59.400 36.000 0.00 0.00 31.98 2.40
951 1009 0.831307 AGCGTTACCCTCCAATCTCC 59.169 55.000 0.00 0.00 0.00 3.71
1086 1144 3.530265 TGTTGTCGTAGAGTGGTTTGT 57.470 42.857 0.00 0.00 36.95 2.83
1090 1148 2.352421 CGGATTGTTGTCGTAGAGTGGT 60.352 50.000 0.00 0.00 36.95 4.16
1188 1247 2.026636 GCATGTTACTGGGAAGGTGGTA 60.027 50.000 0.00 0.00 0.00 3.25
1190 1249 1.271871 TGCATGTTACTGGGAAGGTGG 60.272 52.381 0.00 0.00 0.00 4.61
1191 1250 2.198827 TGCATGTTACTGGGAAGGTG 57.801 50.000 0.00 0.00 0.00 4.00
1467 1526 5.122239 TGATTACAGAAAGCAGTGTGTATGC 59.878 40.000 0.00 0.00 44.18 3.14
1507 1566 6.694877 AAGAAAGTGGTAGTTCTTTTGTCC 57.305 37.500 0.00 0.00 40.37 4.02
1522 1581 9.334693 GCAGTCATTTCTGTTATTAAGAAAGTG 57.665 33.333 5.04 4.32 44.52 3.16
1523 1582 9.289782 AGCAGTCATTTCTGTTATTAAGAAAGT 57.710 29.630 5.04 0.00 44.52 2.66
1528 1587 8.642020 GCAAAAGCAGTCATTTCTGTTATTAAG 58.358 33.333 0.00 0.00 37.70 1.85
1654 1863 6.777580 ACACAAGGACAATCAGTTTTAATCCT 59.222 34.615 0.00 0.00 36.66 3.24
1675 1885 4.571580 ACGGTCGACTGAAAAATAAACACA 59.428 37.500 30.55 0.00 0.00 3.72
1676 1886 5.086888 ACGGTCGACTGAAAAATAAACAC 57.913 39.130 30.55 0.00 0.00 3.32
1677 1887 7.424227 AATACGGTCGACTGAAAAATAAACA 57.576 32.000 30.55 3.06 0.00 2.83
1678 1888 9.254421 GTAAATACGGTCGACTGAAAAATAAAC 57.746 33.333 30.55 13.09 0.00 2.01
1681 1891 7.276218 CCTGTAAATACGGTCGACTGAAAAATA 59.724 37.037 30.55 12.40 0.00 1.40
1682 1892 6.091713 CCTGTAAATACGGTCGACTGAAAAAT 59.908 38.462 30.55 14.39 0.00 1.82
1751 1961 0.603065 AGGAAGCCGGCAAAAATGAC 59.397 50.000 31.54 9.42 0.00 3.06
1780 1990 8.463607 TCGTTACTTTTGGTGAAGAAAATCTTT 58.536 29.630 0.00 0.00 36.73 2.52
1793 2003 7.011202 GTCTCTTTCTCTTTCGTTACTTTTGGT 59.989 37.037 0.00 0.00 0.00 3.67
1968 2178 5.349817 CAGATGAGTCGCAACATTTCTACTT 59.650 40.000 0.00 0.00 0.00 2.24
1969 2179 4.867047 CAGATGAGTCGCAACATTTCTACT 59.133 41.667 0.00 0.00 0.00 2.57
1982 2192 2.163390 CGTGGCAGCAGATGAGTCG 61.163 63.158 0.00 0.00 0.00 4.18
2048 2258 7.288621 TGATGGACTCTGCTCTAGAATGAAATA 59.711 37.037 0.00 0.00 34.32 1.40
2109 2319 6.274579 TCCTGTAATGTTATAAATCGTCGCA 58.725 36.000 0.00 0.00 0.00 5.10
2121 2331 5.396772 CCTCTCAATGGCTCCTGTAATGTTA 60.397 44.000 0.00 0.00 0.00 2.41
2156 2366 4.856664 ACTAATGTTGTATAGCCTCGACG 58.143 43.478 0.00 0.00 0.00 5.12
2157 2367 5.857517 GCTACTAATGTTGTATAGCCTCGAC 59.142 44.000 0.00 0.00 33.61 4.20
2349 3672 9.443283 GATGATTTTCAGGTTTCATAAGATTCG 57.557 33.333 0.00 0.00 0.00 3.34
2366 3689 9.415544 GCTGTATTATTTCCCATGATGATTTTC 57.584 33.333 0.00 0.00 0.00 2.29
2446 3769 2.054799 ACCTAGCAAGACAAGGACCAA 58.945 47.619 0.00 0.00 34.34 3.67
2552 3878 2.104170 CTCAGAGGTCTTCCCACTACC 58.896 57.143 0.00 0.00 34.66 3.18
3057 7382 1.792949 CGAACGGGTTGCAGATATAGC 59.207 52.381 0.00 0.00 0.00 2.97
3061 7386 1.448893 GGCGAACGGGTTGCAGATA 60.449 57.895 7.70 0.00 0.00 1.98
3166 7681 1.822114 TTCCTGGATGTTGCGACGGA 61.822 55.000 0.00 0.00 0.00 4.69
3167 7682 1.375396 TTCCTGGATGTTGCGACGG 60.375 57.895 0.00 0.00 0.00 4.79
3169 7684 0.605319 TGGTTCCTGGATGTTGCGAC 60.605 55.000 0.00 0.00 0.00 5.19
3170 7685 0.109532 TTGGTTCCTGGATGTTGCGA 59.890 50.000 0.00 0.00 0.00 5.10
3174 7689 2.380064 TGCTTTGGTTCCTGGATGTT 57.620 45.000 0.00 0.00 0.00 2.71
3175 7690 2.042162 AGATGCTTTGGTTCCTGGATGT 59.958 45.455 0.00 0.00 0.00 3.06
3208 7732 1.949525 GTGCCATGCCGTCAAGATTAT 59.050 47.619 0.00 0.00 0.00 1.28
3220 7744 1.202110 CGAGAACAATCAGTGCCATGC 60.202 52.381 0.00 0.00 0.00 4.06
3239 7763 0.235665 ATCTTCACAACAACAGCGCG 59.764 50.000 0.00 0.00 0.00 6.86
3650 8174 2.434884 CTTGGCGTGCATCTCGGT 60.435 61.111 0.00 0.00 0.00 4.69
3679 8203 4.215742 CACGGCCCGGCGATCTTA 62.216 66.667 18.12 0.00 0.00 2.10
3702 8226 5.694910 AGCACAGCAAAAAGAATTTGATCTG 59.305 36.000 5.17 6.17 39.02 2.90
3823 8347 5.062809 GCACGAAAAGAAACCAAACATTTCA 59.937 36.000 0.00 0.00 38.32 2.69
3868 8392 6.868864 CCTATACCAAGACTGCATATGTGTAC 59.131 42.308 4.29 0.00 0.00 2.90
3903 8427 9.003658 CATATACAGGATTACACCAATTTCTCC 57.996 37.037 0.00 0.00 0.00 3.71
4002 8527 4.673311 GCTTTGCGTATTCGTGAAAAGAAA 59.327 37.500 15.41 0.00 37.97 2.52
4005 8530 3.810373 AGCTTTGCGTATTCGTGAAAAG 58.190 40.909 10.21 10.21 39.49 2.27
4008 8533 2.095969 CCAAGCTTTGCGTATTCGTGAA 60.096 45.455 0.00 0.00 39.49 3.18
4011 8536 0.168128 GCCAAGCTTTGCGTATTCGT 59.832 50.000 6.78 0.00 39.49 3.85
4012 8537 0.857311 CGCCAAGCTTTGCGTATTCG 60.857 55.000 30.57 7.48 45.43 3.34
4013 8538 2.930168 CGCCAAGCTTTGCGTATTC 58.070 52.632 30.57 0.00 45.43 1.75
4019 8544 2.095263 TGAAAGATACGCCAAGCTTTGC 60.095 45.455 12.38 12.38 31.30 3.68
4020 8545 3.829886 TGAAAGATACGCCAAGCTTTG 57.170 42.857 0.00 0.00 31.30 2.77
4022 8547 4.009675 TCAATGAAAGATACGCCAAGCTT 58.990 39.130 0.00 0.00 0.00 3.74
4023 8548 3.609853 TCAATGAAAGATACGCCAAGCT 58.390 40.909 0.00 0.00 0.00 3.74
4024 8549 4.558538 ATCAATGAAAGATACGCCAAGC 57.441 40.909 0.00 0.00 0.00 4.01
4025 8550 7.482654 TTCTATCAATGAAAGATACGCCAAG 57.517 36.000 0.00 0.00 0.00 3.61
4026 8551 9.554395 TTATTCTATCAATGAAAGATACGCCAA 57.446 29.630 0.00 0.00 0.00 4.52
4027 8552 9.554395 TTTATTCTATCAATGAAAGATACGCCA 57.446 29.630 0.00 0.00 0.00 5.69
4063 8588 3.014623 TGTCATGTACCCTCTGTCGTAG 58.985 50.000 0.00 0.00 0.00 3.51
4065 8590 1.919240 TGTCATGTACCCTCTGTCGT 58.081 50.000 0.00 0.00 0.00 4.34
4067 8592 4.184629 GTTCATGTCATGTACCCTCTGTC 58.815 47.826 12.54 0.00 0.00 3.51
4073 8598 1.014352 GGCGTTCATGTCATGTACCC 58.986 55.000 14.76 12.99 0.00 3.69
4074 8599 1.732941 TGGCGTTCATGTCATGTACC 58.267 50.000 14.76 11.30 0.00 3.34
4075 8600 3.426159 CCTTTGGCGTTCATGTCATGTAC 60.426 47.826 12.54 11.97 0.00 2.90
4076 8601 2.746904 CCTTTGGCGTTCATGTCATGTA 59.253 45.455 12.54 0.00 0.00 2.29
4077 8602 1.541147 CCTTTGGCGTTCATGTCATGT 59.459 47.619 12.54 0.00 0.00 3.21
4078 8603 1.135315 CCCTTTGGCGTTCATGTCATG 60.135 52.381 6.47 6.47 0.00 3.07
4079 8604 1.176527 CCCTTTGGCGTTCATGTCAT 58.823 50.000 0.00 0.00 0.00 3.06
4080 8605 2.639970 CCCTTTGGCGTTCATGTCA 58.360 52.632 0.00 0.00 0.00 3.58
4091 8616 3.070015 GGTTCCATGATTATGCCCTTTGG 59.930 47.826 0.00 0.00 32.79 3.28
4092 8617 3.070015 GGGTTCCATGATTATGCCCTTTG 59.930 47.826 0.00 0.00 33.62 2.77
4093 8618 3.308401 GGGTTCCATGATTATGCCCTTT 58.692 45.455 0.00 0.00 33.62 3.11
4094 8619 2.752829 CGGGTTCCATGATTATGCCCTT 60.753 50.000 9.13 0.00 34.01 3.95
4095 8620 1.202927 CGGGTTCCATGATTATGCCCT 60.203 52.381 9.13 0.00 34.01 5.19
4096 8621 1.247567 CGGGTTCCATGATTATGCCC 58.752 55.000 0.00 2.58 33.27 5.36
4097 8622 1.202879 TCCGGGTTCCATGATTATGCC 60.203 52.381 0.00 0.00 32.79 4.40
4098 8623 2.154462 CTCCGGGTTCCATGATTATGC 58.846 52.381 0.00 0.00 32.79 3.14
4099 8624 2.154462 GCTCCGGGTTCCATGATTATG 58.846 52.381 0.00 0.00 0.00 1.90
4100 8625 1.774254 TGCTCCGGGTTCCATGATTAT 59.226 47.619 0.00 0.00 0.00 1.28
4101 8626 1.140852 CTGCTCCGGGTTCCATGATTA 59.859 52.381 0.00 0.00 0.00 1.75
4102 8627 0.107017 CTGCTCCGGGTTCCATGATT 60.107 55.000 0.00 0.00 0.00 2.57
4103 8628 0.982852 TCTGCTCCGGGTTCCATGAT 60.983 55.000 0.00 0.00 0.00 2.45
4104 8629 1.612146 TCTGCTCCGGGTTCCATGA 60.612 57.895 0.00 0.00 0.00 3.07
4105 8630 1.153289 CTCTGCTCCGGGTTCCATG 60.153 63.158 0.00 0.00 0.00 3.66
4106 8631 1.306141 TCTCTGCTCCGGGTTCCAT 60.306 57.895 0.00 0.00 0.00 3.41
4107 8632 1.984570 CTCTCTGCTCCGGGTTCCA 60.985 63.158 0.00 0.00 0.00 3.53
4108 8633 1.682684 TCTCTCTGCTCCGGGTTCC 60.683 63.158 0.00 0.00 0.00 3.62
4109 8634 1.251527 TGTCTCTCTGCTCCGGGTTC 61.252 60.000 0.00 0.00 0.00 3.62
4110 8635 0.832135 TTGTCTCTCTGCTCCGGGTT 60.832 55.000 0.00 0.00 0.00 4.11
4111 8636 1.228894 TTGTCTCTCTGCTCCGGGT 60.229 57.895 0.00 0.00 0.00 5.28
4112 8637 1.515020 CTTGTCTCTCTGCTCCGGG 59.485 63.158 0.00 0.00 0.00 5.73
4113 8638 1.515020 CCTTGTCTCTCTGCTCCGG 59.485 63.158 0.00 0.00 0.00 5.14
4114 8639 0.967887 TCCCTTGTCTCTCTGCTCCG 60.968 60.000 0.00 0.00 0.00 4.63
4115 8640 1.138661 CATCCCTTGTCTCTCTGCTCC 59.861 57.143 0.00 0.00 0.00 4.70
4116 8641 1.830477 ACATCCCTTGTCTCTCTGCTC 59.170 52.381 0.00 0.00 30.89 4.26
4117 8642 1.949799 ACATCCCTTGTCTCTCTGCT 58.050 50.000 0.00 0.00 30.89 4.24
4118 8643 2.027745 TGAACATCCCTTGTCTCTCTGC 60.028 50.000 0.00 0.00 37.68 4.26
4119 8644 3.969287 TGAACATCCCTTGTCTCTCTG 57.031 47.619 0.00 0.00 37.68 3.35
4120 8645 3.008485 GGTTGAACATCCCTTGTCTCTCT 59.992 47.826 0.00 0.00 37.68 3.10
4121 8646 3.339141 GGTTGAACATCCCTTGTCTCTC 58.661 50.000 0.00 0.00 37.68 3.20
4122 8647 2.040412 GGGTTGAACATCCCTTGTCTCT 59.960 50.000 12.23 0.00 37.68 3.10
4123 8648 2.437413 GGGTTGAACATCCCTTGTCTC 58.563 52.381 12.23 0.00 37.68 3.36
4124 8649 1.271379 CGGGTTGAACATCCCTTGTCT 60.271 52.381 15.98 0.00 41.40 3.41
4125 8650 1.165270 CGGGTTGAACATCCCTTGTC 58.835 55.000 15.98 0.00 41.40 3.18
4126 8651 0.768622 TCGGGTTGAACATCCCTTGT 59.231 50.000 15.98 0.00 41.40 3.16
4127 8652 1.271379 ACTCGGGTTGAACATCCCTTG 60.271 52.381 15.98 11.53 41.40 3.61
4128 8653 1.064825 ACTCGGGTTGAACATCCCTT 58.935 50.000 15.98 1.70 41.40 3.95
4129 8654 1.946984 TACTCGGGTTGAACATCCCT 58.053 50.000 15.98 3.80 41.40 4.20
4130 8655 2.235402 TCTTACTCGGGTTGAACATCCC 59.765 50.000 0.00 10.06 40.26 3.85
4131 8656 3.522553 CTCTTACTCGGGTTGAACATCC 58.477 50.000 0.00 0.00 0.00 3.51
4132 8657 2.930682 GCTCTTACTCGGGTTGAACATC 59.069 50.000 0.00 0.00 0.00 3.06
4133 8658 2.301870 TGCTCTTACTCGGGTTGAACAT 59.698 45.455 0.00 0.00 0.00 2.71
4134 8659 1.689813 TGCTCTTACTCGGGTTGAACA 59.310 47.619 0.00 0.00 0.00 3.18
4135 8660 2.450609 TGCTCTTACTCGGGTTGAAC 57.549 50.000 0.00 0.00 0.00 3.18
4136 8661 2.832129 AGATGCTCTTACTCGGGTTGAA 59.168 45.455 0.00 0.00 0.00 2.69
4137 8662 2.427453 GAGATGCTCTTACTCGGGTTGA 59.573 50.000 0.00 0.00 0.00 3.18
4138 8663 2.482142 GGAGATGCTCTTACTCGGGTTG 60.482 54.545 0.00 0.00 0.00 3.77
4139 8664 1.757699 GGAGATGCTCTTACTCGGGTT 59.242 52.381 0.00 0.00 0.00 4.11
4140 8665 1.342076 TGGAGATGCTCTTACTCGGGT 60.342 52.381 0.00 0.00 0.00 5.28
4141 8666 1.403814 TGGAGATGCTCTTACTCGGG 58.596 55.000 0.00 0.00 0.00 5.14
4142 8667 2.166459 TGTTGGAGATGCTCTTACTCGG 59.834 50.000 0.00 0.00 0.00 4.63
4143 8668 3.443037 CTGTTGGAGATGCTCTTACTCG 58.557 50.000 0.00 0.00 0.00 4.18
4144 8669 3.194062 GCTGTTGGAGATGCTCTTACTC 58.806 50.000 0.00 0.00 0.00 2.59
4268 8831 2.436670 CGTTGTATTTTTGCGCGCTAT 58.563 42.857 33.29 20.72 0.00 2.97
4269 8832 1.872029 CGTTGTATTTTTGCGCGCTA 58.128 45.000 33.29 23.57 0.00 4.26
4422 8991 4.261578 ACTTGTGGGCATGATTTTGAAG 57.738 40.909 0.00 0.00 0.00 3.02
4484 9053 5.435291 AGGAAGATGAAGATTGATGTGTCC 58.565 41.667 0.00 0.00 0.00 4.02
4511 9087 2.823747 TCTTCGGAAGATGAGGACGAAA 59.176 45.455 16.19 0.00 42.09 3.46
4619 9195 1.462616 CCATGGAGATGCCGTTGAAA 58.537 50.000 5.56 0.00 40.66 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.