Multiple sequence alignment - TraesCS4B01G083400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G083400 chr4B 100.000 2869 0 0 1 2869 82165994 82163126 0.000000e+00 5299.0
1 TraesCS4B01G083400 chr4B 93.237 207 13 1 1 206 300036838 300036632 1.290000e-78 303.0
2 TraesCS4B01G083400 chr4B 92.754 207 14 1 1 206 409504464 409504670 6.010000e-77 298.0
3 TraesCS4B01G083400 chr4B 91.787 207 15 2 1 206 266060681 266060886 1.300000e-73 287.0
4 TraesCS4B01G083400 chr4B 96.703 91 3 0 2533 2623 104337330 104337420 4.950000e-33 152.0
5 TraesCS4B01G083400 chr4B 95.652 92 4 0 2533 2624 491017725 491017634 6.400000e-32 148.0
6 TraesCS4B01G083400 chr4D 94.600 1926 79 11 515 2432 55251595 55249687 0.000000e+00 2957.0
7 TraesCS4B01G083400 chr4D 89.324 281 27 2 276 553 55251877 55251597 1.640000e-92 350.0
8 TraesCS4B01G083400 chr4D 90.708 226 18 3 1 226 234383416 234383638 6.010000e-77 298.0
9 TraesCS4B01G083400 chr4A 89.267 2236 151 30 300 2502 541986865 541989044 0.000000e+00 2717.0
10 TraesCS4B01G083400 chr4A 93.750 208 11 2 1 206 697411026 697411233 7.720000e-81 311.0
11 TraesCS4B01G083400 chr4A 97.222 36 1 0 227 262 541986637 541986672 8.580000e-06 62.1
12 TraesCS4B01G083400 chr1B 99.441 179 1 0 1 179 687577277 687577455 2.760000e-85 326.0
13 TraesCS4B01G083400 chr1B 93.237 207 13 1 1 206 319503315 319503521 1.290000e-78 303.0
14 TraesCS4B01G083400 chr7B 94.686 207 10 1 1 206 362413427 362413221 1.280000e-83 320.0
15 TraesCS4B01G083400 chr3B 91.787 207 15 2 1 206 412918340 412918545 1.300000e-73 287.0
16 TraesCS4B01G083400 chr7A 96.591 88 3 0 2530 2617 467851819 467851906 2.300000e-31 147.0
17 TraesCS4B01G083400 chr7A 95.556 90 4 0 2531 2620 664477294 664477205 8.280000e-31 145.0
18 TraesCS4B01G083400 chr3D 96.629 89 2 1 2533 2620 320635164 320635252 2.300000e-31 147.0
19 TraesCS4B01G083400 chr3D 91.346 104 7 2 2533 2634 411724345 411724448 1.070000e-29 141.0
20 TraesCS4B01G083400 chr6D 95.556 90 4 0 2532 2621 316232296 316232385 8.280000e-31 145.0
21 TraesCS4B01G083400 chr2A 96.471 85 3 0 2533 2617 498099443 498099527 1.070000e-29 141.0
22 TraesCS4B01G083400 chr2D 92.784 97 6 1 2529 2625 220975511 220975606 3.850000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G083400 chr4B 82163126 82165994 2868 True 5299.00 5299 100.0000 1 2869 1 chr4B.!!$R1 2868
1 TraesCS4B01G083400 chr4D 55249687 55251877 2190 True 1653.50 2957 91.9620 276 2432 2 chr4D.!!$R1 2156
2 TraesCS4B01G083400 chr4A 541986637 541989044 2407 False 1389.55 2717 93.2445 227 2502 2 chr4A.!!$F2 2275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
895 1109 0.920438 ACCACCACCAAGTACAACCA 59.08 50.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2669 2918 0.036294 GACCGGGAGAGGGAAAAGTG 60.036 60.0 6.32 0.0 35.02 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 8.586570 ACTACATACTACACGTACATACTCTC 57.413 38.462 0.00 0.00 0.00 3.20
78 79 8.200120 ACTACATACTACACGTACATACTCTCA 58.800 37.037 0.00 0.00 0.00 3.27
79 80 7.479897 ACATACTACACGTACATACTCTCAG 57.520 40.000 0.00 0.00 0.00 3.35
80 81 7.046652 ACATACTACACGTACATACTCTCAGT 58.953 38.462 0.00 0.00 0.00 3.41
81 82 7.551974 ACATACTACACGTACATACTCTCAGTT 59.448 37.037 0.00 0.00 0.00 3.16
82 83 6.419980 ACTACACGTACATACTCTCAGTTC 57.580 41.667 0.00 0.00 0.00 3.01
83 84 4.698583 ACACGTACATACTCTCAGTTCC 57.301 45.455 0.00 0.00 0.00 3.62
84 85 3.126514 ACACGTACATACTCTCAGTTCCG 59.873 47.826 0.00 0.00 0.00 4.30
85 86 3.373130 CACGTACATACTCTCAGTTCCGA 59.627 47.826 0.00 0.00 0.00 4.55
86 87 3.373439 ACGTACATACTCTCAGTTCCGAC 59.627 47.826 0.00 0.00 0.00 4.79
87 88 3.373130 CGTACATACTCTCAGTTCCGACA 59.627 47.826 0.00 0.00 0.00 4.35
88 89 4.142752 CGTACATACTCTCAGTTCCGACAA 60.143 45.833 0.00 0.00 0.00 3.18
89 90 4.866508 ACATACTCTCAGTTCCGACAAA 57.133 40.909 0.00 0.00 0.00 2.83
90 91 5.407407 ACATACTCTCAGTTCCGACAAAT 57.593 39.130 0.00 0.00 0.00 2.32
91 92 6.525578 ACATACTCTCAGTTCCGACAAATA 57.474 37.500 0.00 0.00 0.00 1.40
92 93 6.331061 ACATACTCTCAGTTCCGACAAATAC 58.669 40.000 0.00 0.00 0.00 1.89
93 94 6.153000 ACATACTCTCAGTTCCGACAAATACT 59.847 38.462 0.00 0.00 0.00 2.12
94 95 7.338703 ACATACTCTCAGTTCCGACAAATACTA 59.661 37.037 0.00 0.00 0.00 1.82
95 96 5.952033 ACTCTCAGTTCCGACAAATACTAC 58.048 41.667 0.00 0.00 0.00 2.73
96 97 5.475909 ACTCTCAGTTCCGACAAATACTACA 59.524 40.000 0.00 0.00 0.00 2.74
97 98 6.153000 ACTCTCAGTTCCGACAAATACTACAT 59.847 38.462 0.00 0.00 0.00 2.29
98 99 7.338703 ACTCTCAGTTCCGACAAATACTACATA 59.661 37.037 0.00 0.00 0.00 2.29
99 100 7.478322 TCTCAGTTCCGACAAATACTACATAC 58.522 38.462 0.00 0.00 0.00 2.39
100 101 7.121611 TCTCAGTTCCGACAAATACTACATACA 59.878 37.037 0.00 0.00 0.00 2.29
101 102 7.604549 TCAGTTCCGACAAATACTACATACAA 58.395 34.615 0.00 0.00 0.00 2.41
102 103 7.543172 TCAGTTCCGACAAATACTACATACAAC 59.457 37.037 0.00 0.00 0.00 3.32
103 104 7.329962 CAGTTCCGACAAATACTACATACAACA 59.670 37.037 0.00 0.00 0.00 3.33
104 105 8.038944 AGTTCCGACAAATACTACATACAACAT 58.961 33.333 0.00 0.00 0.00 2.71
105 106 9.304731 GTTCCGACAAATACTACATACAACATA 57.695 33.333 0.00 0.00 0.00 2.29
106 107 8.861033 TCCGACAAATACTACATACAACATAC 57.139 34.615 0.00 0.00 0.00 2.39
107 108 8.468399 TCCGACAAATACTACATACAACATACA 58.532 33.333 0.00 0.00 0.00 2.29
108 109 9.089601 CCGACAAATACTACATACAACATACAA 57.910 33.333 0.00 0.00 0.00 2.41
113 114 9.763465 AAATACTACATACAACATACAAAACGC 57.237 29.630 0.00 0.00 0.00 4.84
114 115 6.788684 ACTACATACAACATACAAAACGCA 57.211 33.333 0.00 0.00 0.00 5.24
115 116 7.192148 ACTACATACAACATACAAAACGCAA 57.808 32.000 0.00 0.00 0.00 4.85
130 131 1.435577 CGCAAGTGGTGGTAACTACC 58.564 55.000 0.00 0.00 46.62 3.18
142 143 3.858247 GGTAACTACCACTGCTTGTAGG 58.142 50.000 0.80 0.00 45.73 3.18
143 144 3.512724 GGTAACTACCACTGCTTGTAGGA 59.487 47.826 0.80 0.00 45.73 2.94
144 145 4.020839 GGTAACTACCACTGCTTGTAGGAA 60.021 45.833 0.80 0.00 45.73 3.36
145 146 4.699925 AACTACCACTGCTTGTAGGAAA 57.300 40.909 0.00 0.00 38.98 3.13
146 147 4.004196 ACTACCACTGCTTGTAGGAAAC 57.996 45.455 0.00 0.00 38.98 2.78
147 148 3.389983 ACTACCACTGCTTGTAGGAAACA 59.610 43.478 0.00 0.00 38.98 2.83
148 149 3.508845 ACCACTGCTTGTAGGAAACAT 57.491 42.857 0.00 0.00 38.10 2.71
149 150 3.832527 ACCACTGCTTGTAGGAAACATT 58.167 40.909 0.00 0.00 38.10 2.71
150 151 4.215109 ACCACTGCTTGTAGGAAACATTT 58.785 39.130 0.00 0.00 38.10 2.32
151 152 4.037923 ACCACTGCTTGTAGGAAACATTTG 59.962 41.667 0.00 0.00 38.10 2.32
152 153 4.037923 CCACTGCTTGTAGGAAACATTTGT 59.962 41.667 0.00 0.00 38.10 2.83
153 154 5.215160 CACTGCTTGTAGGAAACATTTGTC 58.785 41.667 0.00 0.00 38.10 3.18
154 155 4.278419 ACTGCTTGTAGGAAACATTTGTCC 59.722 41.667 0.00 0.00 38.10 4.02
155 156 4.469657 TGCTTGTAGGAAACATTTGTCCT 58.530 39.130 0.00 0.00 46.29 3.85
156 157 5.626142 TGCTTGTAGGAAACATTTGTCCTA 58.374 37.500 0.00 0.00 42.68 2.94
157 158 6.245408 TGCTTGTAGGAAACATTTGTCCTAT 58.755 36.000 1.00 0.00 45.89 2.57
158 159 7.398829 TGCTTGTAGGAAACATTTGTCCTATA 58.601 34.615 1.00 0.00 45.89 1.31
159 160 8.052748 TGCTTGTAGGAAACATTTGTCCTATAT 58.947 33.333 1.00 0.00 45.89 0.86
160 161 9.555727 GCTTGTAGGAAACATTTGTCCTATATA 57.444 33.333 1.00 0.00 45.89 0.86
264 265 7.436933 TGGTAACATTTATTTGCACAATCACA 58.563 30.769 0.00 0.00 46.17 3.58
266 267 8.382130 GGTAACATTTATTTGCACAATCACATG 58.618 33.333 0.00 0.00 0.00 3.21
267 268 6.971527 ACATTTATTTGCACAATCACATGG 57.028 33.333 0.00 0.00 0.00 3.66
268 269 6.465948 ACATTTATTTGCACAATCACATGGT 58.534 32.000 0.00 0.00 0.00 3.55
269 270 7.609960 ACATTTATTTGCACAATCACATGGTA 58.390 30.769 0.00 0.00 0.00 3.25
271 272 7.881643 TTTATTTGCACAATCACATGGTAAC 57.118 32.000 0.00 0.00 0.00 2.50
273 274 2.499197 TGCACAATCACATGGTAACGT 58.501 42.857 0.00 0.00 42.51 3.99
274 275 3.665190 TGCACAATCACATGGTAACGTA 58.335 40.909 0.00 0.00 42.51 3.57
276 277 3.682858 GCACAATCACATGGTAACGTACT 59.317 43.478 0.00 0.00 42.51 2.73
277 278 4.865925 GCACAATCACATGGTAACGTACTA 59.134 41.667 0.00 0.00 42.51 1.82
279 280 5.865013 CACAATCACATGGTAACGTACTACA 59.135 40.000 0.00 0.00 42.51 2.74
280 281 6.533723 CACAATCACATGGTAACGTACTACAT 59.466 38.462 0.00 0.00 42.51 2.29
282 283 7.919091 ACAATCACATGGTAACGTACTACATAG 59.081 37.037 0.00 0.00 42.51 2.23
284 440 7.628769 TCACATGGTAACGTACTACATAGAA 57.371 36.000 0.00 0.00 42.51 2.10
295 451 3.595173 ACTACATAGAATGCAACGCACA 58.405 40.909 0.00 0.00 43.04 4.57
296 452 4.191544 ACTACATAGAATGCAACGCACAT 58.808 39.130 0.00 0.00 43.04 3.21
298 454 2.114056 CATAGAATGCAACGCACATGC 58.886 47.619 0.00 0.00 43.04 4.06
333 489 7.890655 AGTCAAAAGAAAAGAGGCTTACCATAT 59.109 33.333 0.00 0.00 39.06 1.78
351 507 7.092137 ACCATATCATGTTCAATCACAACAG 57.908 36.000 0.00 0.00 37.18 3.16
352 508 6.660521 ACCATATCATGTTCAATCACAACAGT 59.339 34.615 0.00 0.00 37.18 3.55
353 509 7.148188 ACCATATCATGTTCAATCACAACAGTC 60.148 37.037 0.00 0.00 37.18 3.51
360 521 5.195379 GTTCAATCACAACAGTCACGTAAC 58.805 41.667 0.00 0.00 0.00 2.50
374 535 6.020995 CAGTCACGTAACAATGAAACCAAAAC 60.021 38.462 0.00 0.00 0.00 2.43
394 558 3.023832 ACCCAAGTGGACAAACTCTTTG 58.976 45.455 0.00 0.00 41.23 2.77
537 702 5.576447 TCTCACCCAAAAGAACTGAAAAC 57.424 39.130 0.00 0.00 0.00 2.43
543 748 5.163416 ACCCAAAAGAACTGAAAACCAGATG 60.163 40.000 0.00 0.00 45.78 2.90
550 755 1.134694 GAAAACCAGATGCGCGGAC 59.865 57.895 8.83 0.00 0.00 4.79
552 757 1.852067 AAAACCAGATGCGCGGACAC 61.852 55.000 8.83 2.97 0.00 3.67
560 765 2.849142 ATGCGCGGACACGAAATTGC 62.849 55.000 8.83 0.00 44.60 3.56
577 782 7.065283 CGAAATTGCTGAATTTTCCAAACTTC 58.935 34.615 0.00 0.00 41.06 3.01
587 792 7.652909 TGAATTTTCCAAACTTCTATTGTGCAG 59.347 33.333 0.00 0.00 31.27 4.41
632 837 2.930826 ACAAGAATGTTCCACGGACT 57.069 45.000 0.00 0.00 35.91 3.85
751 956 1.373570 GCAGCGCTCCTTTGTATTCT 58.626 50.000 7.13 0.00 0.00 2.40
760 965 4.682050 GCTCCTTTGTATTCTCCTCCAGAC 60.682 50.000 0.00 0.00 0.00 3.51
784 989 1.883926 CCCCTACAAAACCACGGAAAG 59.116 52.381 0.00 0.00 0.00 2.62
803 1008 6.201806 CGGAAAGCCATAATTTTTCACAACAA 59.798 34.615 2.84 0.00 33.57 2.83
889 1103 2.428187 CGCCACCACCACCAAGTA 59.572 61.111 0.00 0.00 0.00 2.24
895 1109 0.920438 ACCACCACCAAGTACAACCA 59.080 50.000 0.00 0.00 0.00 3.67
1052 1274 0.890683 CAGCACCACCATTCTTTCCC 59.109 55.000 0.00 0.00 0.00 3.97
1062 1284 0.962356 ATTCTTTCCCCAGCAGCACG 60.962 55.000 0.00 0.00 0.00 5.34
1106 1334 2.032528 CCTCAAGCTCACCGCCAA 59.967 61.111 0.00 0.00 40.39 4.52
1111 1339 3.414136 AAGCTCACCGCCAACACCA 62.414 57.895 0.00 0.00 40.39 4.17
1115 1343 3.591835 CACCGCCAACACCACCAC 61.592 66.667 0.00 0.00 0.00 4.16
1116 1344 4.887190 ACCGCCAACACCACCACC 62.887 66.667 0.00 0.00 0.00 4.61
1117 1345 4.885270 CCGCCAACACCACCACCA 62.885 66.667 0.00 0.00 0.00 4.17
1118 1346 2.830827 CGCCAACACCACCACCAA 60.831 61.111 0.00 0.00 0.00 3.67
1119 1347 2.811799 GCCAACACCACCACCAAC 59.188 61.111 0.00 0.00 0.00 3.77
1120 1348 3.115556 CCAACACCACCACCAACG 58.884 61.111 0.00 0.00 0.00 4.10
1121 1349 2.411290 CAACACCACCACCAACGC 59.589 61.111 0.00 0.00 0.00 4.84
1122 1350 2.831284 AACACCACCACCAACGCC 60.831 61.111 0.00 0.00 0.00 5.68
1123 1351 3.646942 AACACCACCACCAACGCCA 62.647 57.895 0.00 0.00 0.00 5.69
1167 1395 3.397439 GCCAGCAGCTCCTCCTCA 61.397 66.667 0.00 0.00 38.99 3.86
1285 1516 3.680196 TGGCGGAGGGGGACTACT 61.680 66.667 0.00 0.00 0.00 2.57
1293 1524 2.689034 GGGGACTACTGGCAGGCT 60.689 66.667 20.34 0.44 0.00 4.58
1512 1743 5.102953 TCACCCGATTCTTCATCAAGATT 57.897 39.130 0.00 0.00 38.50 2.40
1592 1823 1.205655 CGAGTTCATCTGGGAGCTCAA 59.794 52.381 17.19 1.72 43.02 3.02
1593 1824 2.158986 CGAGTTCATCTGGGAGCTCAAT 60.159 50.000 17.19 0.03 43.02 2.57
1632 1863 3.136123 CTGCCCCTCACCAATGCG 61.136 66.667 0.00 0.00 0.00 4.73
1713 1944 0.036199 AAGAAGCAGCAGGAGCAGAG 60.036 55.000 0.00 0.00 45.49 3.35
1806 2037 4.723309 AGAGTTTGACAGATTTCAAGCCT 58.277 39.130 0.00 0.00 37.41 4.58
1809 2040 5.075493 AGTTTGACAGATTTCAAGCCTGAT 58.925 37.500 0.00 0.00 37.41 2.90
1986 2222 1.312815 AAGTTGCTTGCTCTGGACAC 58.687 50.000 0.00 0.00 0.00 3.67
2033 2280 8.498358 GCAAAAGATAAACTGCAAAGCTAAAAT 58.502 29.630 0.00 0.00 34.87 1.82
2056 2303 5.091261 ACTATGTTCTCTTTTCATCCGCT 57.909 39.130 0.00 0.00 0.00 5.52
2070 2317 0.250124 TCCGCTATACGCCATTTGGG 60.250 55.000 0.00 0.00 41.76 4.12
2075 2322 2.949644 GCTATACGCCATTTGGGAACTT 59.050 45.455 0.00 0.00 40.01 2.66
2106 2353 1.597989 GCCATGCCATTTTGAGCCA 59.402 52.632 0.00 0.00 0.00 4.75
2109 2356 1.760613 CCATGCCATTTTGAGCCATCT 59.239 47.619 0.00 0.00 0.00 2.90
2193 2440 8.530269 AGAACAATTTTGCTGATGAATCTTTC 57.470 30.769 0.00 0.00 0.00 2.62
2212 2461 4.836125 TTCAAACCTGATGAGCTGTTTC 57.164 40.909 0.00 0.00 0.00 2.78
2236 2485 7.940850 TCAGGAAAACAAAATTACCTCTCTTG 58.059 34.615 0.00 0.00 0.00 3.02
2344 2593 3.070476 TCCATCTGCATGTACAAGCAA 57.930 42.857 24.35 16.10 40.73 3.91
2350 2599 0.097674 GCATGTACAAGCAAGCTCCG 59.902 55.000 17.73 0.00 31.28 4.63
2385 2634 5.009210 ACAGCAGCCAAACGAAAATTAGTTA 59.991 36.000 0.00 0.00 0.00 2.24
2429 2678 2.894126 ACACTCTTAGACCTGTCCAGTG 59.106 50.000 11.66 11.66 36.63 3.66
2432 2681 2.499289 CTCTTAGACCTGTCCAGTGCAT 59.501 50.000 0.00 0.00 0.00 3.96
2438 2687 1.303799 CCTGTCCAGTGCATGCAGTC 61.304 60.000 25.16 14.66 0.00 3.51
2439 2688 1.302752 TGTCCAGTGCATGCAGTCC 60.303 57.895 25.16 15.65 0.00 3.85
2440 2689 2.042831 GTCCAGTGCATGCAGTCCC 61.043 63.158 25.16 11.51 0.00 4.46
2441 2690 2.753043 CCAGTGCATGCAGTCCCC 60.753 66.667 25.16 11.11 0.00 4.81
2442 2691 3.129502 CAGTGCATGCAGTCCCCG 61.130 66.667 25.16 10.48 0.00 5.73
2443 2692 3.640407 AGTGCATGCAGTCCCCGT 61.640 61.111 23.41 0.00 0.00 5.28
2444 2693 3.434319 GTGCATGCAGTCCCCGTG 61.434 66.667 23.41 0.00 0.00 4.94
2468 2717 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
2472 2721 0.026674 CGCACACACACACACAAGAG 59.973 55.000 0.00 0.00 0.00 2.85
2476 2725 3.242413 GCACACACACACACAAGAGTAAG 60.242 47.826 0.00 0.00 0.00 2.34
2485 2734 2.816087 ACACAAGAGTAAGGCAAGCATG 59.184 45.455 0.00 0.00 0.00 4.06
2507 2756 9.767228 GCATGAGCTATATGAATCTATTGAGAT 57.233 33.333 13.15 0.00 40.04 2.75
2518 2767 9.887629 ATGAATCTATTGAGATAGGTATGCTTG 57.112 33.333 0.00 0.00 41.87 4.01
2519 2768 8.316946 TGAATCTATTGAGATAGGTATGCTTGG 58.683 37.037 0.00 0.00 41.87 3.61
2520 2769 6.042638 TCTATTGAGATAGGTATGCTTGGC 57.957 41.667 0.00 0.00 36.65 4.52
2521 2770 4.989875 ATTGAGATAGGTATGCTTGGCT 57.010 40.909 0.00 0.00 0.00 4.75
2522 2771 4.342862 TTGAGATAGGTATGCTTGGCTC 57.657 45.455 0.00 0.00 0.00 4.70
2523 2772 3.581101 TGAGATAGGTATGCTTGGCTCT 58.419 45.455 0.00 0.00 0.00 4.09
2524 2773 3.576118 TGAGATAGGTATGCTTGGCTCTC 59.424 47.826 0.00 0.00 0.00 3.20
2525 2774 3.831911 GAGATAGGTATGCTTGGCTCTCT 59.168 47.826 0.00 0.00 0.00 3.10
2526 2775 5.004361 AGATAGGTATGCTTGGCTCTCTA 57.996 43.478 0.00 0.00 0.00 2.43
2527 2776 4.770010 AGATAGGTATGCTTGGCTCTCTAC 59.230 45.833 0.00 0.00 0.00 2.59
2528 2777 2.043227 AGGTATGCTTGGCTCTCTACC 58.957 52.381 0.00 0.00 0.00 3.18
2529 2778 2.043227 GGTATGCTTGGCTCTCTACCT 58.957 52.381 0.00 0.00 0.00 3.08
2530 2779 2.436173 GGTATGCTTGGCTCTCTACCTT 59.564 50.000 0.00 0.00 0.00 3.50
2531 2780 2.706339 ATGCTTGGCTCTCTACCTTG 57.294 50.000 0.00 0.00 0.00 3.61
2532 2781 1.352083 TGCTTGGCTCTCTACCTTGT 58.648 50.000 0.00 0.00 0.00 3.16
2533 2782 2.536066 TGCTTGGCTCTCTACCTTGTA 58.464 47.619 0.00 0.00 0.00 2.41
2534 2783 2.233922 TGCTTGGCTCTCTACCTTGTAC 59.766 50.000 0.00 0.00 0.00 2.90
2535 2784 2.498078 GCTTGGCTCTCTACCTTGTACT 59.502 50.000 0.00 0.00 0.00 2.73
2536 2785 3.429684 GCTTGGCTCTCTACCTTGTACTC 60.430 52.174 0.00 0.00 0.00 2.59
2537 2786 2.736347 TGGCTCTCTACCTTGTACTCC 58.264 52.381 0.00 0.00 0.00 3.85
2538 2787 2.033372 GGCTCTCTACCTTGTACTCCC 58.967 57.143 0.00 0.00 0.00 4.30
2539 2788 2.358405 GGCTCTCTACCTTGTACTCCCT 60.358 54.545 0.00 0.00 0.00 4.20
2540 2789 2.953648 GCTCTCTACCTTGTACTCCCTC 59.046 54.545 0.00 0.00 0.00 4.30
2541 2790 3.558033 CTCTCTACCTTGTACTCCCTCC 58.442 54.545 0.00 0.00 0.00 4.30
2542 2791 2.924302 TCTCTACCTTGTACTCCCTCCA 59.076 50.000 0.00 0.00 0.00 3.86
2543 2792 3.532232 TCTCTACCTTGTACTCCCTCCAT 59.468 47.826 0.00 0.00 0.00 3.41
2544 2793 3.892588 CTCTACCTTGTACTCCCTCCATC 59.107 52.174 0.00 0.00 0.00 3.51
2545 2794 1.880941 ACCTTGTACTCCCTCCATCC 58.119 55.000 0.00 0.00 0.00 3.51
2546 2795 1.132500 CCTTGTACTCCCTCCATCCC 58.868 60.000 0.00 0.00 0.00 3.85
2547 2796 1.625228 CCTTGTACTCCCTCCATCCCA 60.625 57.143 0.00 0.00 0.00 4.37
2548 2797 2.412591 CTTGTACTCCCTCCATCCCAT 58.587 52.381 0.00 0.00 0.00 4.00
2549 2798 3.587498 CTTGTACTCCCTCCATCCCATA 58.413 50.000 0.00 0.00 0.00 2.74
2550 2799 3.717507 TGTACTCCCTCCATCCCATAA 57.282 47.619 0.00 0.00 0.00 1.90
2551 2800 4.228237 TGTACTCCCTCCATCCCATAAT 57.772 45.455 0.00 0.00 0.00 1.28
2552 2801 5.363124 TGTACTCCCTCCATCCCATAATA 57.637 43.478 0.00 0.00 0.00 0.98
2553 2802 5.927465 TGTACTCCCTCCATCCCATAATAT 58.073 41.667 0.00 0.00 0.00 1.28
2554 2803 7.063801 TGTACTCCCTCCATCCCATAATATA 57.936 40.000 0.00 0.00 0.00 0.86
2555 2804 7.492552 TGTACTCCCTCCATCCCATAATATAA 58.507 38.462 0.00 0.00 0.00 0.98
2556 2805 7.623677 TGTACTCCCTCCATCCCATAATATAAG 59.376 40.741 0.00 0.00 0.00 1.73
2557 2806 6.826727 ACTCCCTCCATCCCATAATATAAGA 58.173 40.000 0.00 0.00 0.00 2.10
2558 2807 6.905776 ACTCCCTCCATCCCATAATATAAGAG 59.094 42.308 0.00 0.00 0.00 2.85
2559 2808 5.667626 TCCCTCCATCCCATAATATAAGAGC 59.332 44.000 0.00 0.00 0.00 4.09
2560 2809 5.453903 CCCTCCATCCCATAATATAAGAGCG 60.454 48.000 0.00 0.00 0.00 5.03
2561 2810 5.129485 CCTCCATCCCATAATATAAGAGCGT 59.871 44.000 0.00 0.00 0.00 5.07
2562 2811 6.352222 CCTCCATCCCATAATATAAGAGCGTT 60.352 42.308 0.00 0.00 0.00 4.84
2563 2812 7.016153 TCCATCCCATAATATAAGAGCGTTT 57.984 36.000 0.00 0.00 0.00 3.60
2564 2813 7.458397 TCCATCCCATAATATAAGAGCGTTTT 58.542 34.615 0.00 0.00 0.00 2.43
2565 2814 7.942341 TCCATCCCATAATATAAGAGCGTTTTT 59.058 33.333 0.00 0.00 0.00 1.94
2605 2854 9.967451 TGTCAAAAACACTCTTATATTATGGGA 57.033 29.630 0.00 0.00 31.20 4.37
2607 2856 9.403583 TCAAAAACACTCTTATATTATGGGACC 57.596 33.333 0.00 0.00 0.00 4.46
2608 2857 8.342634 CAAAAACACTCTTATATTATGGGACCG 58.657 37.037 0.00 0.00 0.00 4.79
2609 2858 6.989155 AACACTCTTATATTATGGGACCGA 57.011 37.500 0.00 0.00 0.00 4.69
2610 2859 6.591750 ACACTCTTATATTATGGGACCGAG 57.408 41.667 0.00 0.00 0.00 4.63
2611 2860 5.480772 ACACTCTTATATTATGGGACCGAGG 59.519 44.000 0.00 0.00 0.00 4.63
2612 2861 5.024118 ACTCTTATATTATGGGACCGAGGG 58.976 45.833 0.00 0.00 0.00 4.30
2613 2862 5.222484 ACTCTTATATTATGGGACCGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
2614 2863 5.269991 TCTTATATTATGGGACCGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2615 2864 3.562108 ATATTATGGGACCGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
2616 2865 4.687262 ATATTATGGGACCGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
2617 2866 3.562108 ATTATGGGACCGAGGGAGTAT 57.438 47.619 0.00 0.00 0.00 2.12
2618 2867 3.339713 TTATGGGACCGAGGGAGTATT 57.660 47.619 0.00 0.00 0.00 1.89
2619 2868 2.191981 ATGGGACCGAGGGAGTATTT 57.808 50.000 0.00 0.00 0.00 1.40
2620 2869 1.200519 TGGGACCGAGGGAGTATTTG 58.799 55.000 0.00 0.00 0.00 2.32
2621 2870 1.201424 GGGACCGAGGGAGTATTTGT 58.799 55.000 0.00 0.00 0.00 2.83
2622 2871 1.558294 GGGACCGAGGGAGTATTTGTT 59.442 52.381 0.00 0.00 0.00 2.83
2623 2872 2.026542 GGGACCGAGGGAGTATTTGTTT 60.027 50.000 0.00 0.00 0.00 2.83
2624 2873 3.560668 GGGACCGAGGGAGTATTTGTTTT 60.561 47.826 0.00 0.00 0.00 2.43
2625 2874 3.688185 GGACCGAGGGAGTATTTGTTTTC 59.312 47.826 0.00 0.00 0.00 2.29
2626 2875 4.565028 GGACCGAGGGAGTATTTGTTTTCT 60.565 45.833 0.00 0.00 0.00 2.52
2627 2876 4.981812 ACCGAGGGAGTATTTGTTTTCTT 58.018 39.130 0.00 0.00 0.00 2.52
2628 2877 5.382616 ACCGAGGGAGTATTTGTTTTCTTT 58.617 37.500 0.00 0.00 0.00 2.52
2629 2878 5.831525 ACCGAGGGAGTATTTGTTTTCTTTT 59.168 36.000 0.00 0.00 0.00 2.27
2630 2879 6.322969 ACCGAGGGAGTATTTGTTTTCTTTTT 59.677 34.615 0.00 0.00 0.00 1.94
2631 2880 6.640907 CCGAGGGAGTATTTGTTTTCTTTTTG 59.359 38.462 0.00 0.00 0.00 2.44
2632 2881 6.640907 CGAGGGAGTATTTGTTTTCTTTTTGG 59.359 38.462 0.00 0.00 0.00 3.28
2633 2882 7.469456 CGAGGGAGTATTTGTTTTCTTTTTGGA 60.469 37.037 0.00 0.00 0.00 3.53
2634 2883 8.084985 AGGGAGTATTTGTTTTCTTTTTGGAA 57.915 30.769 0.00 0.00 0.00 3.53
2635 2884 8.544622 AGGGAGTATTTGTTTTCTTTTTGGAAA 58.455 29.630 0.00 0.00 33.98 3.13
2636 2885 9.168451 GGGAGTATTTGTTTTCTTTTTGGAAAA 57.832 29.630 0.00 0.00 41.17 2.29
2667 2916 5.554437 TTGGAAACCAAGGGTAAAATTCC 57.446 39.130 8.86 8.86 38.75 3.01
2668 2917 4.821940 TGGAAACCAAGGGTAAAATTCCT 58.178 39.130 14.44 0.00 38.79 3.36
2669 2918 4.836175 TGGAAACCAAGGGTAAAATTCCTC 59.164 41.667 14.44 0.00 38.79 3.71
2670 2919 4.836175 GGAAACCAAGGGTAAAATTCCTCA 59.164 41.667 8.62 0.00 36.48 3.86
2671 2920 5.279306 GGAAACCAAGGGTAAAATTCCTCAC 60.279 44.000 8.62 0.00 36.48 3.51
2672 2921 4.741928 ACCAAGGGTAAAATTCCTCACT 57.258 40.909 0.00 0.00 32.11 3.41
2673 2922 5.074746 ACCAAGGGTAAAATTCCTCACTT 57.925 39.130 0.00 0.00 32.11 3.16
2674 2923 5.464069 ACCAAGGGTAAAATTCCTCACTTT 58.536 37.500 0.00 0.00 32.11 2.66
2675 2924 5.903010 ACCAAGGGTAAAATTCCTCACTTTT 59.097 36.000 0.00 0.00 32.11 2.27
2676 2925 6.041637 ACCAAGGGTAAAATTCCTCACTTTTC 59.958 38.462 0.00 0.00 32.11 2.29
2677 2926 6.455647 CAAGGGTAAAATTCCTCACTTTTCC 58.544 40.000 0.00 0.00 32.02 3.13
2678 2927 5.084519 AGGGTAAAATTCCTCACTTTTCCC 58.915 41.667 0.00 0.00 34.89 3.97
2679 2928 5.084519 GGGTAAAATTCCTCACTTTTCCCT 58.915 41.667 0.00 0.00 33.53 4.20
2680 2929 5.185249 GGGTAAAATTCCTCACTTTTCCCTC 59.815 44.000 0.00 0.00 33.53 4.30
2681 2930 6.010850 GGTAAAATTCCTCACTTTTCCCTCT 58.989 40.000 0.00 0.00 0.00 3.69
2682 2931 6.151312 GGTAAAATTCCTCACTTTTCCCTCTC 59.849 42.308 0.00 0.00 0.00 3.20
2683 2932 4.308526 AATTCCTCACTTTTCCCTCTCC 57.691 45.455 0.00 0.00 0.00 3.71
2684 2933 1.657804 TCCTCACTTTTCCCTCTCCC 58.342 55.000 0.00 0.00 0.00 4.30
2685 2934 0.250513 CCTCACTTTTCCCTCTCCCG 59.749 60.000 0.00 0.00 0.00 5.14
2686 2935 0.250513 CTCACTTTTCCCTCTCCCGG 59.749 60.000 0.00 0.00 0.00 5.73
2687 2936 0.473117 TCACTTTTCCCTCTCCCGGT 60.473 55.000 0.00 0.00 0.00 5.28
2688 2937 0.036294 CACTTTTCCCTCTCCCGGTC 60.036 60.000 0.00 0.00 0.00 4.79
2689 2938 0.178900 ACTTTTCCCTCTCCCGGTCT 60.179 55.000 0.00 0.00 0.00 3.85
2690 2939 0.537653 CTTTTCCCTCTCCCGGTCTC 59.462 60.000 0.00 0.00 0.00 3.36
2691 2940 0.908180 TTTTCCCTCTCCCGGTCTCC 60.908 60.000 0.00 0.00 0.00 3.71
2692 2941 2.817420 TTTCCCTCTCCCGGTCTCCC 62.817 65.000 0.00 0.00 0.00 4.30
2693 2942 4.862823 CCCTCTCCCGGTCTCCCC 62.863 77.778 0.00 0.00 0.00 4.81
2694 2943 3.756783 CCTCTCCCGGTCTCCCCT 61.757 72.222 0.00 0.00 0.00 4.79
2695 2944 2.392816 CCTCTCCCGGTCTCCCCTA 61.393 68.421 0.00 0.00 0.00 3.53
2696 2945 1.151908 CTCTCCCGGTCTCCCCTAG 59.848 68.421 0.00 0.00 0.00 3.02
2697 2946 2.522193 CTCCCGGTCTCCCCTAGC 60.522 72.222 0.00 0.00 0.00 3.42
2698 2947 4.153330 TCCCGGTCTCCCCTAGCC 62.153 72.222 0.00 0.00 0.00 3.93
2699 2948 4.475444 CCCGGTCTCCCCTAGCCA 62.475 72.222 0.00 0.00 0.00 4.75
2700 2949 2.365105 CCGGTCTCCCCTAGCCAA 60.365 66.667 0.00 0.00 0.00 4.52
2701 2950 2.435693 CCGGTCTCCCCTAGCCAAG 61.436 68.421 0.00 0.00 0.00 3.61
2702 2951 1.381327 CGGTCTCCCCTAGCCAAGA 60.381 63.158 0.00 0.00 0.00 3.02
2703 2952 0.760945 CGGTCTCCCCTAGCCAAGAT 60.761 60.000 0.00 0.00 0.00 2.40
2704 2953 1.052617 GGTCTCCCCTAGCCAAGATC 58.947 60.000 0.00 0.00 0.00 2.75
2705 2954 1.052617 GTCTCCCCTAGCCAAGATCC 58.947 60.000 0.00 0.00 0.00 3.36
2706 2955 0.642156 TCTCCCCTAGCCAAGATCCA 59.358 55.000 0.00 0.00 0.00 3.41
2707 2956 1.009552 TCTCCCCTAGCCAAGATCCAA 59.990 52.381 0.00 0.00 0.00 3.53
2708 2957 1.846439 CTCCCCTAGCCAAGATCCAAA 59.154 52.381 0.00 0.00 0.00 3.28
2709 2958 2.444766 CTCCCCTAGCCAAGATCCAAAT 59.555 50.000 0.00 0.00 0.00 2.32
2710 2959 2.175499 TCCCCTAGCCAAGATCCAAATG 59.825 50.000 0.00 0.00 0.00 2.32
2711 2960 1.959282 CCCTAGCCAAGATCCAAATGC 59.041 52.381 0.00 0.00 0.00 3.56
2712 2961 2.423947 CCCTAGCCAAGATCCAAATGCT 60.424 50.000 0.00 0.00 0.00 3.79
2713 2962 2.883386 CCTAGCCAAGATCCAAATGCTC 59.117 50.000 0.00 0.00 0.00 4.26
2714 2963 2.519771 AGCCAAGATCCAAATGCTCA 57.480 45.000 0.00 0.00 0.00 4.26
2715 2964 2.811410 AGCCAAGATCCAAATGCTCAA 58.189 42.857 0.00 0.00 0.00 3.02
2716 2965 3.167485 AGCCAAGATCCAAATGCTCAAA 58.833 40.909 0.00 0.00 0.00 2.69
2717 2966 3.194968 AGCCAAGATCCAAATGCTCAAAG 59.805 43.478 0.00 0.00 0.00 2.77
2718 2967 3.518590 CCAAGATCCAAATGCTCAAAGC 58.481 45.455 0.00 0.00 42.82 3.51
2719 2968 3.194968 CCAAGATCCAAATGCTCAAAGCT 59.805 43.478 0.11 0.00 42.97 3.74
2720 2969 4.174009 CAAGATCCAAATGCTCAAAGCTG 58.826 43.478 0.11 0.00 42.97 4.24
2721 2970 3.693807 AGATCCAAATGCTCAAAGCTGA 58.306 40.909 0.11 0.00 42.97 4.26
2722 2971 4.279145 AGATCCAAATGCTCAAAGCTGAT 58.721 39.130 0.11 0.00 42.97 2.90
2723 2972 5.443283 AGATCCAAATGCTCAAAGCTGATA 58.557 37.500 0.11 0.00 42.97 2.15
2724 2973 6.069331 AGATCCAAATGCTCAAAGCTGATAT 58.931 36.000 0.11 0.00 42.97 1.63
2725 2974 5.509716 TCCAAATGCTCAAAGCTGATATG 57.490 39.130 0.11 0.00 42.97 1.78
2726 2975 4.951715 TCCAAATGCTCAAAGCTGATATGT 59.048 37.500 0.11 0.00 42.97 2.29
2727 2976 5.066893 TCCAAATGCTCAAAGCTGATATGTC 59.933 40.000 0.11 0.00 42.97 3.06
2728 2977 4.808077 AATGCTCAAAGCTGATATGTCG 57.192 40.909 0.11 0.00 42.97 4.35
2729 2978 3.251479 TGCTCAAAGCTGATATGTCGT 57.749 42.857 0.11 0.00 42.97 4.34
2730 2979 2.931969 TGCTCAAAGCTGATATGTCGTG 59.068 45.455 0.11 0.00 42.97 4.35
2731 2980 2.932614 GCTCAAAGCTGATATGTCGTGT 59.067 45.455 0.00 0.00 38.45 4.49
2732 2981 3.242220 GCTCAAAGCTGATATGTCGTGTG 60.242 47.826 0.00 0.00 38.45 3.82
2733 2982 3.261580 TCAAAGCTGATATGTCGTGTGG 58.738 45.455 0.00 0.00 0.00 4.17
2734 2983 1.656652 AAGCTGATATGTCGTGTGGC 58.343 50.000 0.00 0.00 0.00 5.01
2735 2984 0.536724 AGCTGATATGTCGTGTGGCA 59.463 50.000 0.00 0.00 0.00 4.92
2736 2985 0.933097 GCTGATATGTCGTGTGGCAG 59.067 55.000 0.00 0.00 0.00 4.85
2737 2986 1.471501 GCTGATATGTCGTGTGGCAGA 60.472 52.381 0.00 0.00 0.00 4.26
2738 2987 2.196749 CTGATATGTCGTGTGGCAGAC 58.803 52.381 4.41 4.41 37.85 3.51
2739 2988 1.134818 TGATATGTCGTGTGGCAGACC 60.135 52.381 9.40 0.00 36.61 3.85
2740 2989 0.178068 ATATGTCGTGTGGCAGACCC 59.822 55.000 9.40 0.73 36.61 4.46
2741 2990 1.188871 TATGTCGTGTGGCAGACCCA 61.189 55.000 9.40 6.72 42.79 4.51
2742 2991 2.357517 GTCGTGTGGCAGACCCAG 60.358 66.667 9.40 0.00 46.54 4.45
2743 2992 4.314440 TCGTGTGGCAGACCCAGC 62.314 66.667 9.40 0.00 46.54 4.85
2744 2993 4.624364 CGTGTGGCAGACCCAGCA 62.624 66.667 9.40 0.00 46.54 4.41
2745 2994 2.034687 GTGTGGCAGACCCAGCAT 59.965 61.111 2.86 0.00 46.54 3.79
2746 2995 1.604593 GTGTGGCAGACCCAGCATT 60.605 57.895 2.86 0.00 46.54 3.56
2747 2996 1.604308 TGTGGCAGACCCAGCATTG 60.604 57.895 0.00 0.00 46.54 2.82
2748 2997 2.677524 TGGCAGACCCAGCATTGC 60.678 61.111 0.00 0.00 39.18 3.56
2750 2999 2.362120 GCAGACCCAGCATTGCCT 60.362 61.111 4.70 0.00 0.00 4.75
2751 3000 1.077501 GCAGACCCAGCATTGCCTA 60.078 57.895 4.70 0.00 0.00 3.93
2752 3001 0.680921 GCAGACCCAGCATTGCCTAA 60.681 55.000 4.70 0.00 0.00 2.69
2753 3002 1.838112 CAGACCCAGCATTGCCTAAA 58.162 50.000 4.70 0.00 0.00 1.85
2754 3003 2.381911 CAGACCCAGCATTGCCTAAAT 58.618 47.619 4.70 0.00 0.00 1.40
2756 3005 2.102578 GACCCAGCATTGCCTAAATGT 58.897 47.619 4.70 0.00 46.37 2.71
2757 3006 2.497273 GACCCAGCATTGCCTAAATGTT 59.503 45.455 4.70 0.00 46.37 2.71
2758 3007 3.699038 GACCCAGCATTGCCTAAATGTTA 59.301 43.478 4.70 0.00 46.37 2.41
2759 3008 4.289245 ACCCAGCATTGCCTAAATGTTAT 58.711 39.130 4.70 0.00 46.37 1.89
2760 3009 5.454062 ACCCAGCATTGCCTAAATGTTATA 58.546 37.500 4.70 0.00 46.37 0.98
2761 3010 6.077322 ACCCAGCATTGCCTAAATGTTATAT 58.923 36.000 4.70 0.00 46.37 0.86
2762 3011 6.209391 ACCCAGCATTGCCTAAATGTTATATC 59.791 38.462 4.70 0.00 46.37 1.63
2763 3012 6.209192 CCCAGCATTGCCTAAATGTTATATCA 59.791 38.462 4.70 0.00 46.37 2.15
2764 3013 7.093640 CCCAGCATTGCCTAAATGTTATATCAT 60.094 37.037 4.70 0.00 46.37 2.45
2765 3014 7.758076 CCAGCATTGCCTAAATGTTATATCATG 59.242 37.037 4.70 0.00 46.37 3.07
2766 3015 8.301720 CAGCATTGCCTAAATGTTATATCATGT 58.698 33.333 4.70 0.00 46.37 3.21
2767 3016 8.301720 AGCATTGCCTAAATGTTATATCATGTG 58.698 33.333 4.70 0.00 46.37 3.21
2768 3017 8.084073 GCATTGCCTAAATGTTATATCATGTGT 58.916 33.333 0.00 0.00 46.37 3.72
2769 3018 9.401873 CATTGCCTAAATGTTATATCATGTGTG 57.598 33.333 0.00 0.00 40.78 3.82
2770 3019 8.518430 TTGCCTAAATGTTATATCATGTGTGT 57.482 30.769 0.00 0.00 0.00 3.72
2771 3020 8.518430 TGCCTAAATGTTATATCATGTGTGTT 57.482 30.769 0.00 0.00 0.00 3.32
2772 3021 8.404765 TGCCTAAATGTTATATCATGTGTGTTG 58.595 33.333 0.00 0.00 0.00 3.33
2773 3022 8.405531 GCCTAAATGTTATATCATGTGTGTTGT 58.594 33.333 0.00 0.00 0.00 3.32
2774 3023 9.720667 CCTAAATGTTATATCATGTGTGTTGTG 57.279 33.333 0.00 0.00 0.00 3.33
2776 3025 8.969121 AAATGTTATATCATGTGTGTTGTGTG 57.031 30.769 0.00 0.00 0.00 3.82
2777 3026 7.686438 ATGTTATATCATGTGTGTTGTGTGT 57.314 32.000 0.00 0.00 0.00 3.72
2778 3027 7.127917 TGTTATATCATGTGTGTTGTGTGTC 57.872 36.000 0.00 0.00 0.00 3.67
2779 3028 6.708054 TGTTATATCATGTGTGTTGTGTGTCA 59.292 34.615 0.00 0.00 0.00 3.58
2780 3029 7.227512 TGTTATATCATGTGTGTTGTGTGTCAA 59.772 33.333 0.00 0.00 0.00 3.18
2781 3030 6.822667 ATATCATGTGTGTTGTGTGTCAAT 57.177 33.333 0.00 0.00 38.38 2.57
2782 3031 4.290104 TCATGTGTGTTGTGTGTCAATG 57.710 40.909 0.00 0.00 38.38 2.82
2783 3032 3.066481 TCATGTGTGTTGTGTGTCAATGG 59.934 43.478 0.00 0.00 38.38 3.16
2784 3033 1.133982 TGTGTGTTGTGTGTCAATGGC 59.866 47.619 0.00 0.00 38.38 4.40
2785 3034 0.380024 TGTGTTGTGTGTCAATGGCG 59.620 50.000 0.00 0.00 38.38 5.69
2786 3035 0.934436 GTGTTGTGTGTCAATGGCGC 60.934 55.000 0.00 0.00 38.38 6.53
2787 3036 1.358402 GTTGTGTGTCAATGGCGCA 59.642 52.632 10.83 0.00 38.38 6.09
2788 3037 0.039256 GTTGTGTGTCAATGGCGCAT 60.039 50.000 10.83 0.00 38.38 4.73
2789 3038 1.198867 GTTGTGTGTCAATGGCGCATA 59.801 47.619 10.83 0.00 38.38 3.14
2790 3039 1.528129 TGTGTGTCAATGGCGCATAA 58.472 45.000 10.83 0.00 0.00 1.90
2791 3040 1.468127 TGTGTGTCAATGGCGCATAAG 59.532 47.619 10.83 0.00 0.00 1.73
2792 3041 1.093972 TGTGTCAATGGCGCATAAGG 58.906 50.000 10.83 0.00 0.00 2.69
2793 3042 1.339535 TGTGTCAATGGCGCATAAGGA 60.340 47.619 10.83 0.00 0.00 3.36
2794 3043 1.064060 GTGTCAATGGCGCATAAGGAC 59.936 52.381 10.83 10.50 0.00 3.85
2795 3044 0.663153 GTCAATGGCGCATAAGGACC 59.337 55.000 10.83 0.00 0.00 4.46
2796 3045 0.546122 TCAATGGCGCATAAGGACCT 59.454 50.000 10.83 0.00 0.00 3.85
2797 3046 1.064758 TCAATGGCGCATAAGGACCTT 60.065 47.619 12.41 12.41 0.00 3.50
2798 3047 2.171659 TCAATGGCGCATAAGGACCTTA 59.828 45.455 16.35 16.35 0.00 2.69
2799 3048 3.149196 CAATGGCGCATAAGGACCTTAT 58.851 45.455 19.38 19.38 37.16 1.73
2800 3049 3.508845 ATGGCGCATAAGGACCTTATT 57.491 42.857 22.00 6.09 34.83 1.40
2801 3050 4.634012 ATGGCGCATAAGGACCTTATTA 57.366 40.909 22.00 8.62 34.83 0.98
2802 3051 4.002906 TGGCGCATAAGGACCTTATTAG 57.997 45.455 22.00 18.63 34.83 1.73
2804 3053 3.007614 GGCGCATAAGGACCTTATTAGGA 59.992 47.826 22.00 0.00 45.05 2.94
2805 3054 4.504340 GGCGCATAAGGACCTTATTAGGAA 60.504 45.833 22.00 0.00 45.05 3.36
2806 3055 4.691216 GCGCATAAGGACCTTATTAGGAAG 59.309 45.833 22.00 12.05 45.05 3.46
2807 3056 5.510861 GCGCATAAGGACCTTATTAGGAAGA 60.511 44.000 22.00 0.00 45.05 2.87
2808 3057 6.702329 CGCATAAGGACCTTATTAGGAAGAT 58.298 40.000 22.00 0.00 45.05 2.40
2809 3058 6.591834 CGCATAAGGACCTTATTAGGAAGATG 59.408 42.308 22.00 12.46 45.05 2.90
2810 3059 7.525526 CGCATAAGGACCTTATTAGGAAGATGA 60.526 40.741 22.00 0.00 45.05 2.92
2811 3060 7.821846 GCATAAGGACCTTATTAGGAAGATGAG 59.178 40.741 22.00 9.10 45.05 2.90
2812 3061 9.094578 CATAAGGACCTTATTAGGAAGATGAGA 57.905 37.037 22.00 0.00 45.05 3.27
2813 3062 7.996758 AAGGACCTTATTAGGAAGATGAGAA 57.003 36.000 4.44 0.00 45.05 2.87
2814 3063 7.996758 AGGACCTTATTAGGAAGATGAGAAA 57.003 36.000 4.40 0.00 45.05 2.52
2815 3064 8.028652 AGGACCTTATTAGGAAGATGAGAAAG 57.971 38.462 4.40 0.00 45.05 2.62
2816 3065 7.846823 AGGACCTTATTAGGAAGATGAGAAAGA 59.153 37.037 4.40 0.00 45.05 2.52
2817 3066 8.655901 GGACCTTATTAGGAAGATGAGAAAGAT 58.344 37.037 4.40 0.00 45.05 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 9.684448 GAGAGTATGTACGTGTAGTATGTAGTA 57.316 37.037 0.00 0.00 37.69 1.82
52 53 8.200120 TGAGAGTATGTACGTGTAGTATGTAGT 58.800 37.037 0.00 0.00 37.69 2.73
53 54 8.585189 TGAGAGTATGTACGTGTAGTATGTAG 57.415 38.462 0.00 0.00 37.69 2.74
54 55 8.200120 ACTGAGAGTATGTACGTGTAGTATGTA 58.800 37.037 0.00 0.00 37.69 2.29
55 56 7.046652 ACTGAGAGTATGTACGTGTAGTATGT 58.953 38.462 0.00 0.00 37.69 2.29
56 57 7.479897 ACTGAGAGTATGTACGTGTAGTATG 57.520 40.000 0.00 0.00 37.69 2.39
57 58 7.226325 GGAACTGAGAGTATGTACGTGTAGTAT 59.774 40.741 0.00 0.00 37.69 2.12
58 59 6.536582 GGAACTGAGAGTATGTACGTGTAGTA 59.463 42.308 0.00 0.00 0.00 1.82
59 60 5.353678 GGAACTGAGAGTATGTACGTGTAGT 59.646 44.000 0.00 0.00 0.00 2.73
60 61 5.502058 CGGAACTGAGAGTATGTACGTGTAG 60.502 48.000 0.00 0.00 0.00 2.74
61 62 4.330894 CGGAACTGAGAGTATGTACGTGTA 59.669 45.833 0.00 0.00 0.00 2.90
62 63 3.126514 CGGAACTGAGAGTATGTACGTGT 59.873 47.826 0.00 0.00 0.00 4.49
63 64 3.373130 TCGGAACTGAGAGTATGTACGTG 59.627 47.826 0.00 0.00 0.00 4.49
64 65 3.373439 GTCGGAACTGAGAGTATGTACGT 59.627 47.826 0.00 0.00 0.00 3.57
65 66 3.373130 TGTCGGAACTGAGAGTATGTACG 59.627 47.826 0.00 0.00 0.00 3.67
66 67 4.959596 TGTCGGAACTGAGAGTATGTAC 57.040 45.455 0.00 0.00 0.00 2.90
67 68 5.970317 TTTGTCGGAACTGAGAGTATGTA 57.030 39.130 0.00 0.00 0.00 2.29
68 69 4.866508 TTTGTCGGAACTGAGAGTATGT 57.133 40.909 0.00 0.00 0.00 2.29
69 70 6.565234 AGTATTTGTCGGAACTGAGAGTATG 58.435 40.000 0.00 0.00 0.00 2.39
70 71 6.777213 AGTATTTGTCGGAACTGAGAGTAT 57.223 37.500 0.00 0.00 0.00 2.12
71 72 6.656270 TGTAGTATTTGTCGGAACTGAGAGTA 59.344 38.462 0.00 0.00 0.00 2.59
72 73 5.475909 TGTAGTATTTGTCGGAACTGAGAGT 59.524 40.000 0.00 0.00 0.00 3.24
73 74 5.950883 TGTAGTATTTGTCGGAACTGAGAG 58.049 41.667 0.00 0.00 0.00 3.20
74 75 5.970317 TGTAGTATTTGTCGGAACTGAGA 57.030 39.130 0.00 0.00 0.00 3.27
75 76 7.255569 TGTATGTAGTATTTGTCGGAACTGAG 58.744 38.462 0.00 0.00 0.00 3.35
76 77 7.160547 TGTATGTAGTATTTGTCGGAACTGA 57.839 36.000 0.00 0.00 0.00 3.41
77 78 7.329962 TGTTGTATGTAGTATTTGTCGGAACTG 59.670 37.037 0.00 0.00 0.00 3.16
78 79 7.380536 TGTTGTATGTAGTATTTGTCGGAACT 58.619 34.615 0.00 0.00 0.00 3.01
79 80 7.585286 TGTTGTATGTAGTATTTGTCGGAAC 57.415 36.000 0.00 0.00 0.00 3.62
80 81 9.304731 GTATGTTGTATGTAGTATTTGTCGGAA 57.695 33.333 0.00 0.00 0.00 4.30
81 82 8.468399 TGTATGTTGTATGTAGTATTTGTCGGA 58.532 33.333 0.00 0.00 0.00 4.55
82 83 8.637281 TGTATGTTGTATGTAGTATTTGTCGG 57.363 34.615 0.00 0.00 0.00 4.79
87 88 9.763465 GCGTTTTGTATGTTGTATGTAGTATTT 57.237 29.630 0.00 0.00 0.00 1.40
88 89 8.937884 TGCGTTTTGTATGTTGTATGTAGTATT 58.062 29.630 0.00 0.00 0.00 1.89
89 90 8.481974 TGCGTTTTGTATGTTGTATGTAGTAT 57.518 30.769 0.00 0.00 0.00 2.12
90 91 7.886405 TGCGTTTTGTATGTTGTATGTAGTA 57.114 32.000 0.00 0.00 0.00 1.82
91 92 6.788684 TGCGTTTTGTATGTTGTATGTAGT 57.211 33.333 0.00 0.00 0.00 2.73
92 93 7.268235 CACTTGCGTTTTGTATGTTGTATGTAG 59.732 37.037 0.00 0.00 0.00 2.74
93 94 7.072647 CACTTGCGTTTTGTATGTTGTATGTA 58.927 34.615 0.00 0.00 0.00 2.29
94 95 5.912396 CACTTGCGTTTTGTATGTTGTATGT 59.088 36.000 0.00 0.00 0.00 2.29
95 96 5.341993 CCACTTGCGTTTTGTATGTTGTATG 59.658 40.000 0.00 0.00 0.00 2.39
96 97 5.009210 ACCACTTGCGTTTTGTATGTTGTAT 59.991 36.000 0.00 0.00 0.00 2.29
97 98 4.335874 ACCACTTGCGTTTTGTATGTTGTA 59.664 37.500 0.00 0.00 0.00 2.41
98 99 3.129638 ACCACTTGCGTTTTGTATGTTGT 59.870 39.130 0.00 0.00 0.00 3.32
99 100 3.485378 CACCACTTGCGTTTTGTATGTTG 59.515 43.478 0.00 0.00 0.00 3.33
100 101 3.490078 CCACCACTTGCGTTTTGTATGTT 60.490 43.478 0.00 0.00 0.00 2.71
101 102 2.034053 CCACCACTTGCGTTTTGTATGT 59.966 45.455 0.00 0.00 0.00 2.29
102 103 2.034053 ACCACCACTTGCGTTTTGTATG 59.966 45.455 0.00 0.00 0.00 2.39
103 104 2.303175 ACCACCACTTGCGTTTTGTAT 58.697 42.857 0.00 0.00 0.00 2.29
104 105 1.752683 ACCACCACTTGCGTTTTGTA 58.247 45.000 0.00 0.00 0.00 2.41
105 106 1.752683 TACCACCACTTGCGTTTTGT 58.247 45.000 0.00 0.00 0.00 2.83
106 107 2.098443 AGTTACCACCACTTGCGTTTTG 59.902 45.455 0.00 0.00 0.00 2.44
107 108 2.371306 AGTTACCACCACTTGCGTTTT 58.629 42.857 0.00 0.00 0.00 2.43
108 109 2.047002 AGTTACCACCACTTGCGTTT 57.953 45.000 0.00 0.00 0.00 3.60
109 110 2.486918 GTAGTTACCACCACTTGCGTT 58.513 47.619 0.00 0.00 0.00 4.84
110 111 1.270465 GGTAGTTACCACCACTTGCGT 60.270 52.381 3.45 0.00 45.73 5.24
111 112 1.435577 GGTAGTTACCACCACTTGCG 58.564 55.000 3.45 0.00 45.73 4.85
121 122 3.512724 TCCTACAAGCAGTGGTAGTTACC 59.487 47.826 0.00 1.25 46.62 2.85
122 123 4.796038 TCCTACAAGCAGTGGTAGTTAC 57.204 45.455 0.00 0.00 36.17 2.50
123 124 5.070714 TGTTTCCTACAAGCAGTGGTAGTTA 59.929 40.000 0.00 0.00 36.17 2.24
124 125 4.141574 TGTTTCCTACAAGCAGTGGTAGTT 60.142 41.667 0.00 0.00 36.17 2.24
125 126 3.389983 TGTTTCCTACAAGCAGTGGTAGT 59.610 43.478 0.00 0.00 36.17 2.73
126 127 4.002906 TGTTTCCTACAAGCAGTGGTAG 57.997 45.455 0.00 0.00 37.36 3.18
127 128 4.634012 ATGTTTCCTACAAGCAGTGGTA 57.366 40.909 0.00 0.00 40.89 3.25
128 129 3.508845 ATGTTTCCTACAAGCAGTGGT 57.491 42.857 0.00 0.00 40.89 4.16
129 130 4.037923 ACAAATGTTTCCTACAAGCAGTGG 59.962 41.667 0.00 0.00 40.89 4.00
130 131 5.186996 ACAAATGTTTCCTACAAGCAGTG 57.813 39.130 0.00 0.00 40.89 3.66
131 132 4.278419 GGACAAATGTTTCCTACAAGCAGT 59.722 41.667 0.00 0.00 40.89 4.40
132 133 4.520492 AGGACAAATGTTTCCTACAAGCAG 59.480 41.667 0.00 0.00 40.70 4.24
133 134 4.469657 AGGACAAATGTTTCCTACAAGCA 58.530 39.130 0.00 0.00 40.70 3.91
134 135 6.759497 ATAGGACAAATGTTTCCTACAAGC 57.241 37.500 0.00 0.00 45.37 4.01
210 211 9.228949 CCCGCGATATACCTATCTAAATATAGT 57.771 37.037 8.23 0.00 32.98 2.12
211 212 9.228949 ACCCGCGATATACCTATCTAAATATAG 57.771 37.037 8.23 0.00 32.98 1.31
213 214 9.750783 ATACCCGCGATATACCTATCTAAATAT 57.249 33.333 8.23 0.00 32.98 1.28
214 215 9.006839 CATACCCGCGATATACCTATCTAAATA 57.993 37.037 8.23 0.00 32.98 1.40
215 216 7.039923 CCATACCCGCGATATACCTATCTAAAT 60.040 40.741 8.23 0.00 32.98 1.40
216 217 6.263842 CCATACCCGCGATATACCTATCTAAA 59.736 42.308 8.23 0.00 32.98 1.85
217 218 5.766670 CCATACCCGCGATATACCTATCTAA 59.233 44.000 8.23 0.00 32.98 2.10
218 219 5.163163 ACCATACCCGCGATATACCTATCTA 60.163 44.000 8.23 0.00 32.98 1.98
219 220 4.142790 CCATACCCGCGATATACCTATCT 58.857 47.826 8.23 0.00 32.98 1.98
220 221 3.887716 ACCATACCCGCGATATACCTATC 59.112 47.826 8.23 0.00 0.00 2.08
221 222 3.907221 ACCATACCCGCGATATACCTAT 58.093 45.455 8.23 0.00 0.00 2.57
222 223 3.370840 ACCATACCCGCGATATACCTA 57.629 47.619 8.23 0.00 0.00 3.08
223 224 2.226962 ACCATACCCGCGATATACCT 57.773 50.000 8.23 0.00 0.00 3.08
224 225 3.193267 TGTTACCATACCCGCGATATACC 59.807 47.826 8.23 0.00 0.00 2.73
225 226 4.439305 TGTTACCATACCCGCGATATAC 57.561 45.455 8.23 1.08 0.00 1.47
232 233 4.979815 GCAAATAAATGTTACCATACCCGC 59.020 41.667 0.00 0.00 0.00 6.13
262 263 6.921857 GCATTCTATGTAGTACGTTACCATGT 59.078 38.462 0.00 0.00 0.00 3.21
264 265 7.046292 TGCATTCTATGTAGTACGTTACCAT 57.954 36.000 0.00 0.00 0.00 3.55
266 267 6.075205 CGTTGCATTCTATGTAGTACGTTACC 60.075 42.308 0.00 0.00 0.00 2.85
267 268 6.559158 GCGTTGCATTCTATGTAGTACGTTAC 60.559 42.308 0.00 0.00 0.00 2.50
268 269 5.456497 GCGTTGCATTCTATGTAGTACGTTA 59.544 40.000 0.00 0.00 0.00 3.18
269 270 4.266976 GCGTTGCATTCTATGTAGTACGTT 59.733 41.667 0.00 0.00 0.00 3.99
271 272 3.794564 TGCGTTGCATTCTATGTAGTACG 59.205 43.478 0.00 0.00 31.71 3.67
273 274 4.749976 TGTGCGTTGCATTCTATGTAGTA 58.250 39.130 0.00 0.00 41.91 1.82
274 275 3.595173 TGTGCGTTGCATTCTATGTAGT 58.405 40.909 0.00 0.00 41.91 2.73
276 277 3.242706 GCATGTGCGTTGCATTCTATGTA 60.243 43.478 0.00 0.00 41.91 2.29
277 278 2.478370 GCATGTGCGTTGCATTCTATGT 60.478 45.455 0.00 0.00 41.91 2.29
279 280 1.744522 TGCATGTGCGTTGCATTCTAT 59.255 42.857 4.14 0.00 44.73 1.98
280 281 1.163554 TGCATGTGCGTTGCATTCTA 58.836 45.000 4.14 0.00 44.73 2.10
282 283 4.556052 TGCATGTGCGTTGCATTC 57.444 50.000 4.14 0.00 44.73 2.67
295 451 9.507329 TCTTTTCTTTTGACTAGATAGTTGCAT 57.493 29.630 0.00 0.00 36.50 3.96
296 452 8.902540 TCTTTTCTTTTGACTAGATAGTTGCA 57.097 30.769 0.00 0.00 36.50 4.08
298 454 8.447053 GCCTCTTTTCTTTTGACTAGATAGTTG 58.553 37.037 0.00 0.00 36.50 3.16
301 457 8.785329 AAGCCTCTTTTCTTTTGACTAGATAG 57.215 34.615 0.00 0.00 0.00 2.08
333 489 4.024977 CGTGACTGTTGTGATTGAACATGA 60.025 41.667 0.00 0.00 32.96 3.07
351 507 5.230516 GGTTTTGGTTTCATTGTTACGTGAC 59.769 40.000 3.05 3.05 0.00 3.67
352 508 5.341617 GGTTTTGGTTTCATTGTTACGTGA 58.658 37.500 0.00 0.00 0.00 4.35
353 509 4.504826 GGGTTTTGGTTTCATTGTTACGTG 59.495 41.667 0.00 0.00 0.00 4.49
360 521 3.876320 CCACTTGGGTTTTGGTTTCATTG 59.124 43.478 0.00 0.00 0.00 2.82
374 535 2.362077 CCAAAGAGTTTGTCCACTTGGG 59.638 50.000 0.00 0.00 38.98 4.12
394 558 9.977762 AATGTTTAATACGTCGAAATTAACTCC 57.022 29.630 0.00 1.71 29.58 3.85
440 604 0.767375 CCCACCCTCTACATCATGGG 59.233 60.000 0.00 0.00 44.89 4.00
492 657 2.125147 CCAGCCGCTTCGATCCAA 60.125 61.111 0.00 0.00 0.00 3.53
497 662 2.076622 GATAGCTCCAGCCGCTTCGA 62.077 60.000 0.00 0.00 43.38 3.71
537 702 4.794439 TCGTGTCCGCGCATCTGG 62.794 66.667 8.75 0.00 0.00 3.86
543 748 2.869702 GCAATTTCGTGTCCGCGC 60.870 61.111 0.00 0.00 0.00 6.86
550 755 5.903764 TTGGAAAATTCAGCAATTTCGTG 57.096 34.783 0.00 0.00 40.68 4.35
552 757 6.529463 AGTTTGGAAAATTCAGCAATTTCG 57.471 33.333 0.00 0.00 40.68 3.46
560 765 7.652909 TGCACAATAGAAGTTTGGAAAATTCAG 59.347 33.333 13.14 4.63 43.29 3.02
577 782 5.389098 GCTTCATTTTGTTGCTGCACAATAG 60.389 40.000 0.00 4.21 41.27 1.73
587 792 2.746269 TCTGCTGCTTCATTTTGTTGC 58.254 42.857 0.00 0.00 0.00 4.17
656 861 0.178964 TTTGTTTGCAGGGAGGGGAG 60.179 55.000 0.00 0.00 0.00 4.30
657 862 0.469144 GTTTGTTTGCAGGGAGGGGA 60.469 55.000 0.00 0.00 0.00 4.81
660 865 1.110442 TGTGTTTGTTTGCAGGGAGG 58.890 50.000 0.00 0.00 0.00 4.30
661 866 2.101249 ACATGTGTTTGTTTGCAGGGAG 59.899 45.455 0.00 0.00 0.00 4.30
662 867 2.106566 ACATGTGTTTGTTTGCAGGGA 58.893 42.857 0.00 0.00 0.00 4.20
751 956 2.926326 TAGGGGTGCGTCTGGAGGA 61.926 63.158 0.00 0.00 0.00 3.71
760 965 1.847890 CGTGGTTTTGTAGGGGTGCG 61.848 60.000 0.00 0.00 0.00 5.34
784 989 6.928492 TCCTCTTTGTTGTGAAAAATTATGGC 59.072 34.615 0.00 0.00 0.00 4.40
803 1008 2.042464 TGTCTGTGTGCTCTTCCTCTT 58.958 47.619 0.00 0.00 0.00 2.85
875 1089 1.314730 GGTTGTACTTGGTGGTGGTG 58.685 55.000 0.00 0.00 0.00 4.17
876 1090 0.920438 TGGTTGTACTTGGTGGTGGT 59.080 50.000 0.00 0.00 0.00 4.16
889 1103 0.186386 TTGTCGGGGGATTTGGTTGT 59.814 50.000 0.00 0.00 0.00 3.32
895 1109 0.543410 GGGGTTTTGTCGGGGGATTT 60.543 55.000 0.00 0.00 0.00 2.17
1011 1233 0.689412 GGAGGAAGGACTGGAGGGAG 60.689 65.000 0.00 0.00 0.00 4.30
1102 1324 2.811799 GTTGGTGGTGGTGTTGGC 59.188 61.111 0.00 0.00 0.00 4.52
1106 1334 4.116585 TGGCGTTGGTGGTGGTGT 62.117 61.111 0.00 0.00 0.00 4.16
1111 1339 3.216292 GTTGCTGGCGTTGGTGGT 61.216 61.111 0.00 0.00 0.00 4.16
1115 1343 2.424705 AATGCTGTTGCTGGCGTTGG 62.425 55.000 0.00 0.00 40.48 3.77
1116 1344 0.598158 AAATGCTGTTGCTGGCGTTG 60.598 50.000 0.00 0.00 37.67 4.10
1117 1345 0.318955 GAAATGCTGTTGCTGGCGTT 60.319 50.000 0.00 0.00 39.04 4.84
1118 1346 1.286880 GAAATGCTGTTGCTGGCGT 59.713 52.632 0.00 0.00 40.48 5.68
1119 1347 0.108992 ATGAAATGCTGTTGCTGGCG 60.109 50.000 0.00 0.00 40.48 5.69
1120 1348 1.997606 GAATGAAATGCTGTTGCTGGC 59.002 47.619 0.00 0.00 40.48 4.85
1121 1349 3.306917 TGAATGAAATGCTGTTGCTGG 57.693 42.857 0.00 0.00 40.48 4.85
1122 1350 3.122948 GCTTGAATGAAATGCTGTTGCTG 59.877 43.478 0.00 0.00 40.48 4.41
1123 1351 3.006537 AGCTTGAATGAAATGCTGTTGCT 59.993 39.130 0.00 0.00 40.48 3.91
1167 1395 1.822186 GTTGGCGGTTGTGGTCACT 60.822 57.895 2.66 0.00 0.00 3.41
1274 1505 2.041265 CCTGCCAGTAGTCCCCCT 59.959 66.667 0.00 0.00 0.00 4.79
1285 1516 3.695606 GGTCTCGTCAGCCTGCCA 61.696 66.667 0.00 0.00 0.00 4.92
1465 1696 1.021390 CGCAGCGACTTCTCCCAAAT 61.021 55.000 9.98 0.00 0.00 2.32
1512 1743 0.034767 CCAGCTTCTTCATCCAGCCA 60.035 55.000 0.00 0.00 33.73 4.75
1592 1823 4.129737 CCTCCGGCGTGTCGTCAT 62.130 66.667 6.01 0.00 0.00 3.06
1644 1875 0.616111 AGATGTTCTCCAGGAGCCGT 60.616 55.000 12.26 6.01 0.00 5.68
1695 1926 1.597989 CTCTGCTCCTGCTGCTTCT 59.402 57.895 0.00 0.00 40.48 2.85
1713 1944 2.993853 CCCTTGTCAGCCTCCTCC 59.006 66.667 0.00 0.00 0.00 4.30
1830 2061 4.754372 TGACAGCATCATCACAAACTTC 57.246 40.909 0.00 0.00 29.99 3.01
1966 2202 1.678101 GTGTCCAGAGCAAGCAACTTT 59.322 47.619 0.00 0.00 0.00 2.66
1970 2206 1.597854 CCGTGTCCAGAGCAAGCAA 60.598 57.895 0.00 0.00 0.00 3.91
2033 2280 6.222038 AGCGGATGAAAAGAGAACATAGTA 57.778 37.500 0.00 0.00 0.00 1.82
2034 2281 5.091261 AGCGGATGAAAAGAGAACATAGT 57.909 39.130 0.00 0.00 0.00 2.12
2035 2282 7.061210 CGTATAGCGGATGAAAAGAGAACATAG 59.939 40.741 0.00 0.00 36.85 2.23
2056 2303 3.283751 CCAAGTTCCCAAATGGCGTATA 58.716 45.455 0.00 0.00 0.00 1.47
2070 2317 1.337167 GGCCATTTCTGCACCAAGTTC 60.337 52.381 0.00 0.00 0.00 3.01
2075 2322 1.890625 GCATGGCCATTTCTGCACCA 61.891 55.000 21.47 0.00 34.77 4.17
2106 2353 1.583054 GTAATCCGCCGAAAGCAGAT 58.417 50.000 0.00 0.00 40.47 2.90
2109 2356 0.461339 GAGGTAATCCGCCGAAAGCA 60.461 55.000 0.00 0.00 44.04 3.91
2193 2440 4.156664 CTGAAACAGCTCATCAGGTTTG 57.843 45.455 10.66 0.00 37.51 2.93
2212 2461 7.649306 CACAAGAGAGGTAATTTTGTTTTCCTG 59.351 37.037 0.00 0.00 30.15 3.86
2344 2593 0.984230 TGTTTCAGAATCCCGGAGCT 59.016 50.000 0.73 0.00 0.00 4.09
2350 2599 0.813821 GGCTGCTGTTTCAGAATCCC 59.186 55.000 0.00 0.00 36.19 3.85
2385 2634 4.144297 TGGCAAAGAGACTTAAAGCATGT 58.856 39.130 0.00 0.00 0.00 3.21
2460 2709 3.206150 CTTGCCTTACTCTTGTGTGTGT 58.794 45.455 0.00 0.00 0.00 3.72
2463 2712 2.221169 TGCTTGCCTTACTCTTGTGTG 58.779 47.619 0.00 0.00 0.00 3.82
2466 2715 3.341823 CTCATGCTTGCCTTACTCTTGT 58.658 45.455 0.00 0.00 0.00 3.16
2467 2716 2.097142 GCTCATGCTTGCCTTACTCTTG 59.903 50.000 0.00 0.00 36.03 3.02
2468 2717 2.363683 GCTCATGCTTGCCTTACTCTT 58.636 47.619 0.00 0.00 36.03 2.85
2498 2747 6.047511 AGCCAAGCATACCTATCTCAATAG 57.952 41.667 0.00 0.00 35.56 1.73
2502 2751 3.576118 GAGAGCCAAGCATACCTATCTCA 59.424 47.826 0.00 0.00 33.71 3.27
2503 2752 3.831911 AGAGAGCCAAGCATACCTATCTC 59.168 47.826 0.00 0.00 33.70 2.75
2504 2753 3.855668 AGAGAGCCAAGCATACCTATCT 58.144 45.455 0.00 0.00 0.00 1.98
2505 2754 4.081917 GGTAGAGAGCCAAGCATACCTATC 60.082 50.000 0.00 0.00 31.87 2.08
2506 2755 3.835395 GGTAGAGAGCCAAGCATACCTAT 59.165 47.826 0.00 0.00 31.87 2.57
2507 2756 3.117093 AGGTAGAGAGCCAAGCATACCTA 60.117 47.826 9.62 0.00 40.86 3.08
2508 2757 2.043227 GGTAGAGAGCCAAGCATACCT 58.957 52.381 0.00 0.00 31.87 3.08
2509 2758 2.043227 AGGTAGAGAGCCAAGCATACC 58.957 52.381 0.00 0.00 34.22 2.73
2510 2759 3.118592 ACAAGGTAGAGAGCCAAGCATAC 60.119 47.826 0.00 0.00 0.00 2.39
2511 2760 3.107601 ACAAGGTAGAGAGCCAAGCATA 58.892 45.455 0.00 0.00 0.00 3.14
2512 2761 1.912043 ACAAGGTAGAGAGCCAAGCAT 59.088 47.619 0.00 0.00 0.00 3.79
2513 2762 1.352083 ACAAGGTAGAGAGCCAAGCA 58.648 50.000 0.00 0.00 0.00 3.91
2514 2763 2.498078 AGTACAAGGTAGAGAGCCAAGC 59.502 50.000 0.00 0.00 0.00 4.01
2515 2764 3.131400 GGAGTACAAGGTAGAGAGCCAAG 59.869 52.174 0.00 0.00 0.00 3.61
2516 2765 3.097614 GGAGTACAAGGTAGAGAGCCAA 58.902 50.000 0.00 0.00 0.00 4.52
2517 2766 2.623502 GGGAGTACAAGGTAGAGAGCCA 60.624 54.545 0.00 0.00 0.00 4.75
2518 2767 2.033372 GGGAGTACAAGGTAGAGAGCC 58.967 57.143 0.00 0.00 0.00 4.70
2519 2768 2.953648 GAGGGAGTACAAGGTAGAGAGC 59.046 54.545 0.00 0.00 0.00 4.09
2520 2769 3.053544 TGGAGGGAGTACAAGGTAGAGAG 60.054 52.174 0.00 0.00 0.00 3.20
2521 2770 2.924302 TGGAGGGAGTACAAGGTAGAGA 59.076 50.000 0.00 0.00 0.00 3.10
2522 2771 3.383698 TGGAGGGAGTACAAGGTAGAG 57.616 52.381 0.00 0.00 0.00 2.43
2523 2772 3.373877 GGATGGAGGGAGTACAAGGTAGA 60.374 52.174 0.00 0.00 0.00 2.59
2524 2773 2.966516 GGATGGAGGGAGTACAAGGTAG 59.033 54.545 0.00 0.00 0.00 3.18
2525 2774 2.359994 GGGATGGAGGGAGTACAAGGTA 60.360 54.545 0.00 0.00 0.00 3.08
2526 2775 1.625508 GGGATGGAGGGAGTACAAGGT 60.626 57.143 0.00 0.00 0.00 3.50
2527 2776 1.132500 GGGATGGAGGGAGTACAAGG 58.868 60.000 0.00 0.00 0.00 3.61
2528 2777 1.879575 TGGGATGGAGGGAGTACAAG 58.120 55.000 0.00 0.00 0.00 3.16
2529 2778 2.587060 ATGGGATGGAGGGAGTACAA 57.413 50.000 0.00 0.00 0.00 2.41
2530 2779 3.717507 TTATGGGATGGAGGGAGTACA 57.282 47.619 0.00 0.00 0.00 2.90
2531 2780 7.844779 TCTTATATTATGGGATGGAGGGAGTAC 59.155 40.741 0.00 0.00 0.00 2.73
2532 2781 7.961940 TCTTATATTATGGGATGGAGGGAGTA 58.038 38.462 0.00 0.00 0.00 2.59
2533 2782 6.826727 TCTTATATTATGGGATGGAGGGAGT 58.173 40.000 0.00 0.00 0.00 3.85
2534 2783 6.183361 GCTCTTATATTATGGGATGGAGGGAG 60.183 46.154 0.00 0.00 0.00 4.30
2535 2784 5.667626 GCTCTTATATTATGGGATGGAGGGA 59.332 44.000 0.00 0.00 0.00 4.20
2536 2785 5.453903 CGCTCTTATATTATGGGATGGAGGG 60.454 48.000 0.00 0.00 0.00 4.30
2537 2786 5.129485 ACGCTCTTATATTATGGGATGGAGG 59.871 44.000 0.00 0.00 0.00 4.30
2538 2787 6.227298 ACGCTCTTATATTATGGGATGGAG 57.773 41.667 0.00 0.00 0.00 3.86
2539 2788 6.620877 AACGCTCTTATATTATGGGATGGA 57.379 37.500 0.00 0.00 0.00 3.41
2540 2789 7.687941 AAAACGCTCTTATATTATGGGATGG 57.312 36.000 0.00 0.00 0.00 3.51
2579 2828 9.967451 TCCCATAATATAAGAGTGTTTTTGACA 57.033 29.630 0.00 0.00 35.42 3.58
2581 2830 9.403583 GGTCCCATAATATAAGAGTGTTTTTGA 57.596 33.333 0.00 0.00 0.00 2.69
2582 2831 8.342634 CGGTCCCATAATATAAGAGTGTTTTTG 58.657 37.037 0.00 0.00 0.00 2.44
2583 2832 8.269317 TCGGTCCCATAATATAAGAGTGTTTTT 58.731 33.333 0.00 0.00 0.00 1.94
2584 2833 7.798071 TCGGTCCCATAATATAAGAGTGTTTT 58.202 34.615 0.00 0.00 0.00 2.43
2585 2834 7.369551 TCGGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
2586 2835 6.014499 CCTCGGTCCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
2587 2836 5.480772 CCTCGGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
2588 2837 5.105310 CCCTCGGTCCCATAATATAAGAGTG 60.105 48.000 0.00 0.00 0.00 3.51
2589 2838 5.024118 CCCTCGGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
2590 2839 5.269991 TCCCTCGGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
2591 2840 5.222484 ACTCCCTCGGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2592 2841 5.024118 ACTCCCTCGGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2593 2842 5.019657 ACTCCCTCGGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2594 2843 4.687262 ACTCCCTCGGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2595 2844 3.562108 ACTCCCTCGGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2596 2845 4.687262 ATACTCCCTCGGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
2597 2846 3.562108 ATACTCCCTCGGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
2598 2847 3.339713 AATACTCCCTCGGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
2599 2848 2.969950 CAAATACTCCCTCGGTCCCATA 59.030 50.000 0.00 0.00 0.00 2.74
2600 2849 1.768870 CAAATACTCCCTCGGTCCCAT 59.231 52.381 0.00 0.00 0.00 4.00
2601 2850 1.200519 CAAATACTCCCTCGGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
2602 2851 1.201424 ACAAATACTCCCTCGGTCCC 58.799 55.000 0.00 0.00 0.00 4.46
2603 2852 3.345508 AAACAAATACTCCCTCGGTCC 57.654 47.619 0.00 0.00 0.00 4.46
2604 2853 4.576879 AGAAAACAAATACTCCCTCGGTC 58.423 43.478 0.00 0.00 0.00 4.79
2605 2854 4.635699 AGAAAACAAATACTCCCTCGGT 57.364 40.909 0.00 0.00 0.00 4.69
2606 2855 5.959618 AAAGAAAACAAATACTCCCTCGG 57.040 39.130 0.00 0.00 0.00 4.63
2607 2856 6.640907 CCAAAAAGAAAACAAATACTCCCTCG 59.359 38.462 0.00 0.00 0.00 4.63
2608 2857 7.722363 TCCAAAAAGAAAACAAATACTCCCTC 58.278 34.615 0.00 0.00 0.00 4.30
2609 2858 7.669089 TCCAAAAAGAAAACAAATACTCCCT 57.331 32.000 0.00 0.00 0.00 4.20
2610 2859 8.725405 TTTCCAAAAAGAAAACAAATACTCCC 57.275 30.769 0.00 0.00 32.90 4.30
2638 2887 6.816616 TTACCCTTGGTTTCCAATCTTTTT 57.183 33.333 1.58 0.00 43.07 1.94
2639 2888 6.816616 TTTACCCTTGGTTTCCAATCTTTT 57.183 33.333 1.58 0.00 43.07 2.27
2640 2889 6.816616 TTTTACCCTTGGTTTCCAATCTTT 57.183 33.333 1.58 0.00 43.07 2.52
2641 2890 7.387265 AATTTTACCCTTGGTTTCCAATCTT 57.613 32.000 1.58 0.00 43.07 2.40
2642 2891 6.013725 GGAATTTTACCCTTGGTTTCCAATCT 60.014 38.462 8.80 0.00 43.07 2.40
2643 2892 6.013725 AGGAATTTTACCCTTGGTTTCCAATC 60.014 38.462 13.98 0.00 43.07 2.67
2644 2893 5.849475 AGGAATTTTACCCTTGGTTTCCAAT 59.151 36.000 13.98 0.00 43.07 3.16
2645 2894 5.220521 AGGAATTTTACCCTTGGTTTCCAA 58.779 37.500 13.98 1.25 39.82 3.53
2646 2895 4.821940 AGGAATTTTACCCTTGGTTTCCA 58.178 39.130 13.98 0.00 39.82 3.53
2647 2896 4.836175 TGAGGAATTTTACCCTTGGTTTCC 59.164 41.667 6.41 6.41 38.47 3.13
2648 2897 5.538813 AGTGAGGAATTTTACCCTTGGTTTC 59.461 40.000 0.00 0.00 37.09 2.78
2649 2898 5.464069 AGTGAGGAATTTTACCCTTGGTTT 58.536 37.500 0.00 0.00 37.09 3.27
2650 2899 5.074746 AGTGAGGAATTTTACCCTTGGTT 57.925 39.130 0.00 0.00 37.09 3.67
2651 2900 4.741928 AGTGAGGAATTTTACCCTTGGT 57.258 40.909 0.00 0.00 40.16 3.67
2652 2901 6.419484 AAAAGTGAGGAATTTTACCCTTGG 57.581 37.500 0.00 0.00 31.84 3.61
2653 2902 6.455647 GGAAAAGTGAGGAATTTTACCCTTG 58.544 40.000 0.00 0.00 31.84 3.61
2654 2903 5.542635 GGGAAAAGTGAGGAATTTTACCCTT 59.457 40.000 0.94 0.00 41.65 3.95
2655 2904 5.084519 GGGAAAAGTGAGGAATTTTACCCT 58.915 41.667 0.94 0.00 41.65 4.34
2656 2905 5.084519 AGGGAAAAGTGAGGAATTTTACCC 58.915 41.667 7.82 8.26 46.49 3.69
2657 2906 6.010850 AGAGGGAAAAGTGAGGAATTTTACC 58.989 40.000 3.88 3.88 45.92 2.85
2658 2907 6.151312 GGAGAGGGAAAAGTGAGGAATTTTAC 59.849 42.308 0.00 0.00 0.00 2.01
2659 2908 6.246163 GGAGAGGGAAAAGTGAGGAATTTTA 58.754 40.000 0.00 0.00 0.00 1.52
2660 2909 5.080337 GGAGAGGGAAAAGTGAGGAATTTT 58.920 41.667 0.00 0.00 0.00 1.82
2661 2910 4.509302 GGGAGAGGGAAAAGTGAGGAATTT 60.509 45.833 0.00 0.00 0.00 1.82
2662 2911 3.010696 GGGAGAGGGAAAAGTGAGGAATT 59.989 47.826 0.00 0.00 0.00 2.17
2663 2912 2.578480 GGGAGAGGGAAAAGTGAGGAAT 59.422 50.000 0.00 0.00 0.00 3.01
2664 2913 1.985895 GGGAGAGGGAAAAGTGAGGAA 59.014 52.381 0.00 0.00 0.00 3.36
2665 2914 1.657804 GGGAGAGGGAAAAGTGAGGA 58.342 55.000 0.00 0.00 0.00 3.71
2666 2915 0.250513 CGGGAGAGGGAAAAGTGAGG 59.749 60.000 0.00 0.00 0.00 3.86
2667 2916 0.250513 CCGGGAGAGGGAAAAGTGAG 59.749 60.000 0.00 0.00 0.00 3.51
2668 2917 0.473117 ACCGGGAGAGGGAAAAGTGA 60.473 55.000 6.32 0.00 35.02 3.41
2669 2918 0.036294 GACCGGGAGAGGGAAAAGTG 60.036 60.000 6.32 0.00 35.02 3.16
2670 2919 0.178900 AGACCGGGAGAGGGAAAAGT 60.179 55.000 6.32 0.00 35.02 2.66
2671 2920 0.537653 GAGACCGGGAGAGGGAAAAG 59.462 60.000 6.32 0.00 35.02 2.27
2672 2921 0.908180 GGAGACCGGGAGAGGGAAAA 60.908 60.000 6.32 0.00 35.02 2.29
2673 2922 1.305887 GGAGACCGGGAGAGGGAAA 60.306 63.158 6.32 0.00 35.02 3.13
2674 2923 2.363361 GGAGACCGGGAGAGGGAA 59.637 66.667 6.32 0.00 35.02 3.97
2675 2924 3.752167 GGGAGACCGGGAGAGGGA 61.752 72.222 6.32 0.00 43.64 4.20
2686 2935 1.052617 GGATCTTGGCTAGGGGAGAC 58.947 60.000 0.00 0.00 0.00 3.36
2687 2936 0.642156 TGGATCTTGGCTAGGGGAGA 59.358 55.000 0.00 0.00 0.00 3.71
2688 2937 1.511613 TTGGATCTTGGCTAGGGGAG 58.488 55.000 0.00 0.00 0.00 4.30
2689 2938 1.979809 TTTGGATCTTGGCTAGGGGA 58.020 50.000 0.00 0.00 0.00 4.81
2690 2939 2.590821 CATTTGGATCTTGGCTAGGGG 58.409 52.381 0.00 0.00 0.00 4.79
2691 2940 1.959282 GCATTTGGATCTTGGCTAGGG 59.041 52.381 0.00 0.00 0.00 3.53
2692 2941 2.883386 GAGCATTTGGATCTTGGCTAGG 59.117 50.000 0.00 0.00 0.00 3.02
2693 2942 3.548770 TGAGCATTTGGATCTTGGCTAG 58.451 45.455 0.00 0.00 31.67 3.42
2694 2943 3.650281 TGAGCATTTGGATCTTGGCTA 57.350 42.857 0.00 0.00 31.67 3.93
2695 2944 2.519771 TGAGCATTTGGATCTTGGCT 57.480 45.000 0.00 0.00 31.67 4.75
2696 2945 3.518590 CTTTGAGCATTTGGATCTTGGC 58.481 45.455 0.00 0.00 31.67 4.52
2697 2946 3.194968 AGCTTTGAGCATTTGGATCTTGG 59.805 43.478 2.47 0.00 45.56 3.61
2698 2947 4.082408 TCAGCTTTGAGCATTTGGATCTTG 60.082 41.667 2.47 0.00 45.56 3.02
2699 2948 4.084287 TCAGCTTTGAGCATTTGGATCTT 58.916 39.130 2.47 0.00 45.56 2.40
2700 2949 3.693807 TCAGCTTTGAGCATTTGGATCT 58.306 40.909 2.47 0.00 45.56 2.75
2701 2950 4.650754 ATCAGCTTTGAGCATTTGGATC 57.349 40.909 2.47 0.00 45.56 3.36
2702 2951 5.597182 ACATATCAGCTTTGAGCATTTGGAT 59.403 36.000 2.47 0.87 45.56 3.41
2703 2952 4.951715 ACATATCAGCTTTGAGCATTTGGA 59.048 37.500 2.47 0.00 45.56 3.53
2704 2953 5.258456 ACATATCAGCTTTGAGCATTTGG 57.742 39.130 2.47 0.00 45.56 3.28
2705 2954 4.968181 CGACATATCAGCTTTGAGCATTTG 59.032 41.667 2.47 0.00 45.56 2.32
2706 2955 4.637534 ACGACATATCAGCTTTGAGCATTT 59.362 37.500 2.47 0.00 45.56 2.32
2707 2956 4.034858 CACGACATATCAGCTTTGAGCATT 59.965 41.667 2.47 0.00 45.56 3.56
2708 2957 3.558829 CACGACATATCAGCTTTGAGCAT 59.441 43.478 2.47 0.00 45.56 3.79
2709 2958 2.931969 CACGACATATCAGCTTTGAGCA 59.068 45.455 2.47 0.00 45.56 4.26
2710 2959 2.932614 ACACGACATATCAGCTTTGAGC 59.067 45.455 0.00 0.00 42.84 4.26
2711 2960 3.308053 CCACACGACATATCAGCTTTGAG 59.692 47.826 0.00 0.00 0.00 3.02
2712 2961 3.261580 CCACACGACATATCAGCTTTGA 58.738 45.455 0.00 0.00 0.00 2.69
2713 2962 2.223112 GCCACACGACATATCAGCTTTG 60.223 50.000 0.00 0.00 0.00 2.77
2714 2963 2.009774 GCCACACGACATATCAGCTTT 58.990 47.619 0.00 0.00 0.00 3.51
2715 2964 1.066215 TGCCACACGACATATCAGCTT 60.066 47.619 0.00 0.00 0.00 3.74
2716 2965 0.536724 TGCCACACGACATATCAGCT 59.463 50.000 0.00 0.00 0.00 4.24
2717 2966 0.933097 CTGCCACACGACATATCAGC 59.067 55.000 0.00 0.00 0.00 4.26
2718 2967 2.196749 GTCTGCCACACGACATATCAG 58.803 52.381 0.00 0.00 0.00 2.90
2719 2968 1.134818 GGTCTGCCACACGACATATCA 60.135 52.381 0.00 0.00 34.09 2.15
2720 2969 1.571919 GGTCTGCCACACGACATATC 58.428 55.000 0.00 0.00 34.09 1.63
2721 2970 0.178068 GGGTCTGCCACACGACATAT 59.822 55.000 0.00 0.00 36.17 1.78
2722 2971 1.188871 TGGGTCTGCCACACGACATA 61.189 55.000 0.00 0.00 36.17 2.29
2723 2972 2.347490 GGGTCTGCCACACGACAT 59.653 61.111 0.00 0.00 36.17 3.06
2724 2973 3.157949 TGGGTCTGCCACACGACA 61.158 61.111 0.00 0.00 36.17 4.35
2725 2974 2.357517 CTGGGTCTGCCACACGAC 60.358 66.667 0.00 0.00 36.17 4.34
2726 2975 4.314440 GCTGGGTCTGCCACACGA 62.314 66.667 0.00 0.00 36.17 4.35
2727 2976 3.907260 ATGCTGGGTCTGCCACACG 62.907 63.158 0.00 0.00 36.17 4.49
2728 2977 1.604593 AATGCTGGGTCTGCCACAC 60.605 57.895 0.00 0.00 36.17 3.82
2729 2978 1.604308 CAATGCTGGGTCTGCCACA 60.604 57.895 0.00 0.00 36.17 4.17
2730 2979 2.998279 GCAATGCTGGGTCTGCCAC 61.998 63.158 0.00 0.00 36.17 5.01
2731 2980 2.677524 GCAATGCTGGGTCTGCCA 60.678 61.111 0.00 0.00 36.17 4.92
2732 2981 3.455469 GGCAATGCTGGGTCTGCC 61.455 66.667 4.82 0.00 46.95 4.85
2733 2982 0.680921 TTAGGCAATGCTGGGTCTGC 60.681 55.000 4.82 0.00 0.00 4.26
2734 2983 1.838112 TTTAGGCAATGCTGGGTCTG 58.162 50.000 4.82 0.00 0.00 3.51
2735 2984 2.291800 ACATTTAGGCAATGCTGGGTCT 60.292 45.455 4.82 0.00 45.74 3.85
2736 2985 2.102578 ACATTTAGGCAATGCTGGGTC 58.897 47.619 4.82 0.00 45.74 4.46
2737 2986 2.236489 ACATTTAGGCAATGCTGGGT 57.764 45.000 4.82 0.00 45.74 4.51
2738 2987 4.942761 ATAACATTTAGGCAATGCTGGG 57.057 40.909 4.82 0.00 45.74 4.45
2739 2988 7.218228 TGATATAACATTTAGGCAATGCTGG 57.782 36.000 4.82 0.00 45.74 4.85
2740 2989 8.301720 ACATGATATAACATTTAGGCAATGCTG 58.698 33.333 4.82 0.00 45.74 4.41
2741 2990 8.301720 CACATGATATAACATTTAGGCAATGCT 58.698 33.333 4.82 0.00 45.74 3.79
2742 2991 8.084073 ACACATGATATAACATTTAGGCAATGC 58.916 33.333 0.00 0.00 45.74 3.56
2744 2993 9.135189 ACACACATGATATAACATTTAGGCAAT 57.865 29.630 0.00 0.00 0.00 3.56
2745 2994 8.518430 ACACACATGATATAACATTTAGGCAA 57.482 30.769 0.00 0.00 0.00 4.52
2746 2995 8.404765 CAACACACATGATATAACATTTAGGCA 58.595 33.333 0.00 0.00 0.00 4.75
2747 2996 8.405531 ACAACACACATGATATAACATTTAGGC 58.594 33.333 0.00 0.00 0.00 3.93
2748 2997 9.720667 CACAACACACATGATATAACATTTAGG 57.279 33.333 0.00 0.00 0.00 2.69
2751 3000 8.575589 ACACACAACACACATGATATAACATTT 58.424 29.630 0.00 0.00 0.00 2.32
2752 3001 8.109705 ACACACAACACACATGATATAACATT 57.890 30.769 0.00 0.00 0.00 2.71
2753 3002 7.390162 TGACACACAACACACATGATATAACAT 59.610 33.333 0.00 0.00 0.00 2.71
2754 3003 6.708054 TGACACACAACACACATGATATAACA 59.292 34.615 0.00 0.00 0.00 2.41
2755 3004 7.127917 TGACACACAACACACATGATATAAC 57.872 36.000 0.00 0.00 0.00 1.89
2756 3005 7.736447 TTGACACACAACACACATGATATAA 57.264 32.000 0.00 0.00 33.18 0.98
2757 3006 7.148272 CCATTGACACACAACACACATGATATA 60.148 37.037 0.00 0.00 41.52 0.86
2758 3007 6.349528 CCATTGACACACAACACACATGATAT 60.350 38.462 0.00 0.00 41.52 1.63
2759 3008 5.048852 CCATTGACACACAACACACATGATA 60.049 40.000 0.00 0.00 41.52 2.15
2760 3009 4.261698 CCATTGACACACAACACACATGAT 60.262 41.667 0.00 0.00 41.52 2.45
2761 3010 3.066481 CCATTGACACACAACACACATGA 59.934 43.478 0.00 0.00 41.52 3.07
2762 3011 3.373849 CCATTGACACACAACACACATG 58.626 45.455 0.00 0.00 41.52 3.21
2763 3012 2.223782 GCCATTGACACACAACACACAT 60.224 45.455 0.00 0.00 41.52 3.21
2764 3013 1.133982 GCCATTGACACACAACACACA 59.866 47.619 0.00 0.00 41.52 3.72
2765 3014 1.838913 GCCATTGACACACAACACAC 58.161 50.000 0.00 0.00 41.52 3.82
2766 3015 0.380024 CGCCATTGACACACAACACA 59.620 50.000 0.00 0.00 41.52 3.72
2767 3016 0.934436 GCGCCATTGACACACAACAC 60.934 55.000 0.00 0.00 41.52 3.32
2768 3017 1.358402 GCGCCATTGACACACAACA 59.642 52.632 0.00 0.00 41.52 3.33
2769 3018 0.039256 ATGCGCCATTGACACACAAC 60.039 50.000 4.18 0.00 41.52 3.32
2770 3019 1.528129 TATGCGCCATTGACACACAA 58.472 45.000 4.18 0.00 42.95 3.33
2771 3020 1.468127 CTTATGCGCCATTGACACACA 59.532 47.619 4.18 0.00 0.00 3.72
2772 3021 1.202177 CCTTATGCGCCATTGACACAC 60.202 52.381 4.18 0.00 0.00 3.82
2773 3022 1.093972 CCTTATGCGCCATTGACACA 58.906 50.000 4.18 0.00 0.00 3.72
2774 3023 1.064060 GTCCTTATGCGCCATTGACAC 59.936 52.381 4.18 0.00 0.00 3.67
2775 3024 1.378531 GTCCTTATGCGCCATTGACA 58.621 50.000 4.18 0.00 0.00 3.58
2776 3025 0.663153 GGTCCTTATGCGCCATTGAC 59.337 55.000 4.18 5.26 0.00 3.18
2777 3026 0.546122 AGGTCCTTATGCGCCATTGA 59.454 50.000 4.18 0.00 0.00 2.57
2778 3027 1.392589 AAGGTCCTTATGCGCCATTG 58.607 50.000 4.18 0.00 0.00 2.82
2779 3028 3.508845 ATAAGGTCCTTATGCGCCATT 57.491 42.857 21.29 0.00 35.61 3.16
2780 3029 3.508845 AATAAGGTCCTTATGCGCCAT 57.491 42.857 22.40 5.33 36.85 4.40
2781 3030 3.244422 CCTAATAAGGTCCTTATGCGCCA 60.244 47.826 22.40 7.24 36.85 5.69
2782 3031 3.007614 TCCTAATAAGGTCCTTATGCGCC 59.992 47.826 22.40 0.00 44.09 6.53
2783 3032 4.267349 TCCTAATAAGGTCCTTATGCGC 57.733 45.455 22.40 0.00 44.09 6.09
2784 3033 6.097915 TCTTCCTAATAAGGTCCTTATGCG 57.902 41.667 22.40 16.00 44.09 4.73
2785 3034 7.680730 TCATCTTCCTAATAAGGTCCTTATGC 58.319 38.462 22.40 0.00 44.09 3.14
2786 3035 9.094578 TCTCATCTTCCTAATAAGGTCCTTATG 57.905 37.037 22.40 12.17 44.09 1.90
2787 3036 9.676129 TTCTCATCTTCCTAATAAGGTCCTTAT 57.324 33.333 17.17 17.17 44.09 1.73
2788 3037 9.502035 TTTCTCATCTTCCTAATAAGGTCCTTA 57.498 33.333 13.84 13.84 44.09 2.69
2789 3038 7.996758 TTCTCATCTTCCTAATAAGGTCCTT 57.003 36.000 9.62 9.62 44.09 3.36
2790 3039 7.846823 TCTTTCTCATCTTCCTAATAAGGTCCT 59.153 37.037 0.00 0.00 44.09 3.85
2791 3040 8.024145 TCTTTCTCATCTTCCTAATAAGGTCC 57.976 38.462 0.00 0.00 44.09 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.