Multiple sequence alignment - TraesCS4B01G082000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G082000 chr4B 100.000 2549 0 0 1 2549 80654238 80651690 0.000000e+00 4708
1 TraesCS4B01G082000 chr4B 95.341 1996 75 8 563 2549 657233507 657231521 0.000000e+00 3155
2 TraesCS4B01G082000 chr4B 95.324 1946 83 3 565 2510 648881433 648879496 0.000000e+00 3083
3 TraesCS4B01G082000 chr4B 95.277 1948 70 6 565 2510 89561743 89563670 0.000000e+00 3068
4 TraesCS4B01G082000 chr4B 98.239 284 5 0 1 284 80662475 80662192 4.900000e-137 497
5 TraesCS4B01G082000 chr4B 98.577 281 4 0 4 284 344339811 344339531 4.900000e-137 497
6 TraesCS4B01G082000 chr1B 95.998 1949 68 6 563 2510 639164486 639162547 0.000000e+00 3158
7 TraesCS4B01G082000 chr1B 94.667 1950 79 7 564 2510 575860356 575858429 0.000000e+00 3001
8 TraesCS4B01G082000 chr1B 90.158 569 28 12 1990 2549 427481735 427481186 0.000000e+00 715
9 TraesCS4B01G082000 chr1B 87.654 567 55 12 1 564 348394121 348394675 0.000000e+00 645
10 TraesCS4B01G082000 chr2B 95.485 1949 73 7 564 2510 62450927 62452862 0.000000e+00 3097
11 TraesCS4B01G082000 chr2B 94.671 1989 87 9 564 2549 565228143 565226171 0.000000e+00 3068
12 TraesCS4B01G082000 chr2B 97.895 285 6 0 1 285 784065928 784066212 6.340000e-136 494
13 TraesCS4B01G082000 chr2B 85.463 454 28 14 2118 2549 50917518 50917081 3.010000e-119 438
14 TraesCS4B01G082000 chr2B 88.136 354 17 8 2212 2549 776163152 776163496 5.110000e-107 398
15 TraesCS4B01G082000 chr2B 100.000 40 0 0 2510 2549 62452879 62452918 9.780000e-10 75
16 TraesCS4B01G082000 chr7B 95.182 1951 82 6 565 2510 129569433 129567490 0.000000e+00 3072
17 TraesCS4B01G082000 chr7B 94.507 1948 91 10 564 2510 81247810 81249742 0.000000e+00 2990
18 TraesCS4B01G082000 chr7B 98.239 284 5 0 1 284 594389660 594389943 4.900000e-137 497
19 TraesCS4B01G082000 chr7B 97.251 291 8 0 1 291 281155502 281155792 6.340000e-136 494
20 TraesCS4B01G082000 chr7B 97.544 285 7 0 1 285 624749985 624750269 2.950000e-134 488
21 TraesCS4B01G082000 chr5B 95.072 1948 71 8 565 2510 518021938 518020014 0.000000e+00 3042
22 TraesCS4B01G082000 chr5B 98.246 285 5 0 1 285 621250549 621250833 1.360000e-137 499
23 TraesCS4B01G082000 chr5B 93.684 285 17 1 281 564 312728851 312729135 2.340000e-115 425
24 TraesCS4B01G082000 chr5B 93.357 286 17 2 281 564 216623811 216624096 3.030000e-114 422
25 TraesCS4B01G082000 chr3B 94.613 1949 88 8 562 2510 804661029 804662960 0.000000e+00 3001
26 TraesCS4B01G082000 chr6B 94.507 1948 88 10 565 2510 44370161 44368231 0.000000e+00 2987
27 TraesCS4B01G082000 chr6B 97.902 286 6 0 1 286 147938791 147939076 1.760000e-136 496
28 TraesCS4B01G082000 chr6B 93.684 285 16 2 281 564 151256650 151256933 2.340000e-115 425
29 TraesCS4B01G082000 chr6B 89.969 319 30 2 281 597 686565954 686566272 6.560000e-111 411
30 TraesCS4B01G082000 chr3D 90.106 849 31 19 1715 2549 475107990 475108799 0.000000e+00 1053
31 TraesCS4B01G082000 chr3D 93.662 284 17 1 281 563 126079427 126079144 8.430000e-115 424
32 TraesCS4B01G082000 chr7D 88.739 444 22 10 2118 2549 22899835 22899408 3.760000e-143 518
33 TraesCS4B01G082000 chr6D 94.035 285 16 1 281 564 438504190 438504474 5.040000e-117 431
34 TraesCS4B01G082000 chr2A 93.684 285 17 1 281 564 209731514 209731230 2.340000e-115 425
35 TraesCS4B01G082000 chr1D 93.333 285 18 1 281 564 143659355 143659071 1.090000e-113 420
36 TraesCS4B01G082000 chr3A 86.850 327 25 7 6 330 717033879 717034189 1.450000e-92 350
37 TraesCS4B01G082000 chr4D 85.627 327 27 10 6 331 299785887 299785580 2.450000e-85 326


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G082000 chr4B 80651690 80654238 2548 True 4708 4708 100.0000 1 2549 1 chr4B.!!$R1 2548
1 TraesCS4B01G082000 chr4B 657231521 657233507 1986 True 3155 3155 95.3410 563 2549 1 chr4B.!!$R5 1986
2 TraesCS4B01G082000 chr4B 648879496 648881433 1937 True 3083 3083 95.3240 565 2510 1 chr4B.!!$R4 1945
3 TraesCS4B01G082000 chr4B 89561743 89563670 1927 False 3068 3068 95.2770 565 2510 1 chr4B.!!$F1 1945
4 TraesCS4B01G082000 chr1B 639162547 639164486 1939 True 3158 3158 95.9980 563 2510 1 chr1B.!!$R3 1947
5 TraesCS4B01G082000 chr1B 575858429 575860356 1927 True 3001 3001 94.6670 564 2510 1 chr1B.!!$R2 1946
6 TraesCS4B01G082000 chr1B 427481186 427481735 549 True 715 715 90.1580 1990 2549 1 chr1B.!!$R1 559
7 TraesCS4B01G082000 chr1B 348394121 348394675 554 False 645 645 87.6540 1 564 1 chr1B.!!$F1 563
8 TraesCS4B01G082000 chr2B 565226171 565228143 1972 True 3068 3068 94.6710 564 2549 1 chr2B.!!$R2 1985
9 TraesCS4B01G082000 chr2B 62450927 62452918 1991 False 1586 3097 97.7425 564 2549 2 chr2B.!!$F3 1985
10 TraesCS4B01G082000 chr7B 129567490 129569433 1943 True 3072 3072 95.1820 565 2510 1 chr7B.!!$R1 1945
11 TraesCS4B01G082000 chr7B 81247810 81249742 1932 False 2990 2990 94.5070 564 2510 1 chr7B.!!$F1 1946
12 TraesCS4B01G082000 chr5B 518020014 518021938 1924 True 3042 3042 95.0720 565 2510 1 chr5B.!!$R1 1945
13 TraesCS4B01G082000 chr3B 804661029 804662960 1931 False 3001 3001 94.6130 562 2510 1 chr3B.!!$F1 1948
14 TraesCS4B01G082000 chr6B 44368231 44370161 1930 True 2987 2987 94.5070 565 2510 1 chr6B.!!$R1 1945
15 TraesCS4B01G082000 chr3D 475107990 475108799 809 False 1053 1053 90.1060 1715 2549 1 chr3D.!!$F1 834

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
218 220 0.036388 GCTCCCCTTGTGTCGAATCA 60.036 55.0 0.0 0.0 0.00 2.57 F
290 292 0.774276 TTGTGGGTTATCAGGCACCA 59.226 50.0 0.0 0.0 34.36 4.17 F
291 293 0.774276 TGTGGGTTATCAGGCACCAA 59.226 50.0 0.0 0.0 34.36 3.67 F
1063 1065 1.103803 GGAGCGTGTGGAGATGTCTA 58.896 55.0 0.0 0.0 0.00 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1063 1065 0.826715 CACCATGGACAGACGAGGAT 59.173 55.000 21.47 0.0 0.00 3.24 R
1113 1115 2.159226 ACGATTCTGGTTCCTCGATGTC 60.159 50.000 0.00 0.0 35.24 3.06 R
1498 1716 3.055385 ACAACCAGTGCGATTACCATACT 60.055 43.478 0.00 0.0 0.00 2.12 R
2510 2749 2.060326 TTCGTCATGAGTCCGTGAAC 57.940 50.000 0.00 0.0 39.78 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 27 7.724305 TCTCGCTTATTTACTTTTCTGTTGT 57.276 32.000 0.00 0.00 0.00 3.32
74 76 8.840833 ACCAAAAACATTACTTTTGTTGTCTT 57.159 26.923 7.13 0.00 40.57 3.01
75 77 8.931775 ACCAAAAACATTACTTTTGTTGTCTTC 58.068 29.630 7.13 0.00 40.57 2.87
76 78 8.930760 CCAAAAACATTACTTTTGTTGTCTTCA 58.069 29.630 7.13 0.00 40.57 3.02
77 79 9.739786 CAAAAACATTACTTTTGTTGTCTTCAC 57.260 29.630 0.00 0.00 38.43 3.18
78 80 9.705290 AAAAACATTACTTTTGTTGTCTTCACT 57.295 25.926 0.00 0.00 37.38 3.41
79 81 9.705290 AAAACATTACTTTTGTTGTCTTCACTT 57.295 25.926 0.00 0.00 37.38 3.16
80 82 9.705290 AAACATTACTTTTGTTGTCTTCACTTT 57.295 25.926 0.00 0.00 37.38 2.66
81 83 9.705290 AACATTACTTTTGTTGTCTTCACTTTT 57.295 25.926 0.00 0.00 36.02 2.27
82 84 9.139174 ACATTACTTTTGTTGTCTTCACTTTTG 57.861 29.630 0.00 0.00 0.00 2.44
83 85 9.139174 CATTACTTTTGTTGTCTTCACTTTTGT 57.861 29.630 0.00 0.00 0.00 2.83
84 86 9.705290 ATTACTTTTGTTGTCTTCACTTTTGTT 57.295 25.926 0.00 0.00 0.00 2.83
86 88 8.515473 ACTTTTGTTGTCTTCACTTTTGTTAC 57.485 30.769 0.00 0.00 0.00 2.50
87 89 7.597369 ACTTTTGTTGTCTTCACTTTTGTTACC 59.403 33.333 0.00 0.00 0.00 2.85
88 90 5.224562 TGTTGTCTTCACTTTTGTTACCG 57.775 39.130 0.00 0.00 0.00 4.02
89 91 4.696402 TGTTGTCTTCACTTTTGTTACCGT 59.304 37.500 0.00 0.00 0.00 4.83
90 92 5.181622 TGTTGTCTTCACTTTTGTTACCGTT 59.818 36.000 0.00 0.00 0.00 4.44
91 93 6.370994 TGTTGTCTTCACTTTTGTTACCGTTA 59.629 34.615 0.00 0.00 0.00 3.18
92 94 6.348621 TGTCTTCACTTTTGTTACCGTTAC 57.651 37.500 0.00 0.00 0.00 2.50
93 95 5.294060 TGTCTTCACTTTTGTTACCGTTACC 59.706 40.000 0.00 0.00 0.00 2.85
94 96 5.294060 GTCTTCACTTTTGTTACCGTTACCA 59.706 40.000 0.00 0.00 0.00 3.25
95 97 5.294060 TCTTCACTTTTGTTACCGTTACCAC 59.706 40.000 0.00 0.00 0.00 4.16
96 98 3.876320 TCACTTTTGTTACCGTTACCACC 59.124 43.478 0.00 0.00 0.00 4.61
97 99 3.626670 CACTTTTGTTACCGTTACCACCA 59.373 43.478 0.00 0.00 0.00 4.17
98 100 3.627123 ACTTTTGTTACCGTTACCACCAC 59.373 43.478 0.00 0.00 0.00 4.16
99 101 3.557228 TTTGTTACCGTTACCACCACT 57.443 42.857 0.00 0.00 0.00 4.00
100 102 4.679373 TTTGTTACCGTTACCACCACTA 57.321 40.909 0.00 0.00 0.00 2.74
101 103 4.888326 TTGTTACCGTTACCACCACTAT 57.112 40.909 0.00 0.00 0.00 2.12
102 104 4.454728 TGTTACCGTTACCACCACTATC 57.545 45.455 0.00 0.00 0.00 2.08
103 105 3.831333 TGTTACCGTTACCACCACTATCA 59.169 43.478 0.00 0.00 0.00 2.15
104 106 4.467082 TGTTACCGTTACCACCACTATCAT 59.533 41.667 0.00 0.00 0.00 2.45
105 107 5.655974 TGTTACCGTTACCACCACTATCATA 59.344 40.000 0.00 0.00 0.00 2.15
106 108 6.324512 TGTTACCGTTACCACCACTATCATAT 59.675 38.462 0.00 0.00 0.00 1.78
107 109 5.881923 ACCGTTACCACCACTATCATATT 57.118 39.130 0.00 0.00 0.00 1.28
108 110 6.982160 ACCGTTACCACCACTATCATATTA 57.018 37.500 0.00 0.00 0.00 0.98
109 111 6.752168 ACCGTTACCACCACTATCATATTAC 58.248 40.000 0.00 0.00 0.00 1.89
110 112 6.552350 ACCGTTACCACCACTATCATATTACT 59.448 38.462 0.00 0.00 0.00 2.24
111 113 7.070322 ACCGTTACCACCACTATCATATTACTT 59.930 37.037 0.00 0.00 0.00 2.24
112 114 7.929785 CCGTTACCACCACTATCATATTACTTT 59.070 37.037 0.00 0.00 0.00 2.66
113 115 8.761497 CGTTACCACCACTATCATATTACTTTG 58.239 37.037 0.00 0.00 0.00 2.77
114 116 8.557029 GTTACCACCACTATCATATTACTTTGC 58.443 37.037 0.00 0.00 0.00 3.68
115 117 6.900194 ACCACCACTATCATATTACTTTGCT 58.100 36.000 0.00 0.00 0.00 3.91
116 118 8.029782 ACCACCACTATCATATTACTTTGCTA 57.970 34.615 0.00 0.00 0.00 3.49
117 119 7.931948 ACCACCACTATCATATTACTTTGCTAC 59.068 37.037 0.00 0.00 0.00 3.58
118 120 8.150945 CCACCACTATCATATTACTTTGCTACT 58.849 37.037 0.00 0.00 0.00 2.57
127 129 9.953565 TCATATTACTTTGCTACTAAACACCTT 57.046 29.630 0.00 0.00 0.00 3.50
128 130 9.988350 CATATTACTTTGCTACTAAACACCTTG 57.012 33.333 0.00 0.00 0.00 3.61
129 131 4.830826 ACTTTGCTACTAAACACCTTGC 57.169 40.909 0.00 0.00 0.00 4.01
130 132 4.461198 ACTTTGCTACTAAACACCTTGCT 58.539 39.130 0.00 0.00 0.00 3.91
131 133 4.275936 ACTTTGCTACTAAACACCTTGCTG 59.724 41.667 0.00 0.00 0.00 4.41
132 134 2.151202 TGCTACTAAACACCTTGCTGC 58.849 47.619 0.00 0.00 0.00 5.25
133 135 2.151202 GCTACTAAACACCTTGCTGCA 58.849 47.619 0.00 0.00 0.00 4.41
134 136 2.160417 GCTACTAAACACCTTGCTGCAG 59.840 50.000 10.11 10.11 0.00 4.41
135 137 2.638480 ACTAAACACCTTGCTGCAGA 57.362 45.000 20.43 0.00 0.00 4.26
136 138 3.146104 ACTAAACACCTTGCTGCAGAT 57.854 42.857 20.43 0.00 0.00 2.90
137 139 4.286297 ACTAAACACCTTGCTGCAGATA 57.714 40.909 20.43 1.74 0.00 1.98
138 140 4.003648 ACTAAACACCTTGCTGCAGATAC 58.996 43.478 20.43 0.00 0.00 2.24
139 141 2.867109 AACACCTTGCTGCAGATACT 57.133 45.000 20.43 0.00 0.00 2.12
140 142 3.981071 AACACCTTGCTGCAGATACTA 57.019 42.857 20.43 0.00 0.00 1.82
141 143 3.981071 ACACCTTGCTGCAGATACTAA 57.019 42.857 20.43 2.89 0.00 2.24
142 144 3.866651 ACACCTTGCTGCAGATACTAAG 58.133 45.455 20.43 12.16 0.00 2.18
143 145 3.261897 ACACCTTGCTGCAGATACTAAGT 59.738 43.478 20.43 4.01 0.00 2.24
144 146 4.256920 CACCTTGCTGCAGATACTAAGTT 58.743 43.478 20.43 0.00 0.00 2.66
145 147 4.697352 CACCTTGCTGCAGATACTAAGTTT 59.303 41.667 20.43 0.29 0.00 2.66
146 148 4.938226 ACCTTGCTGCAGATACTAAGTTTC 59.062 41.667 20.43 0.00 0.00 2.78
147 149 4.333926 CCTTGCTGCAGATACTAAGTTTCC 59.666 45.833 20.43 0.00 0.00 3.13
148 150 4.551702 TGCTGCAGATACTAAGTTTCCA 57.448 40.909 20.43 0.00 0.00 3.53
149 151 4.507710 TGCTGCAGATACTAAGTTTCCAG 58.492 43.478 20.43 0.00 0.00 3.86
150 152 3.873952 GCTGCAGATACTAAGTTTCCAGG 59.126 47.826 20.43 0.00 0.00 4.45
151 153 4.624125 GCTGCAGATACTAAGTTTCCAGGT 60.624 45.833 20.43 0.00 0.00 4.00
152 154 4.832248 TGCAGATACTAAGTTTCCAGGTG 58.168 43.478 0.00 0.00 0.00 4.00
153 155 4.286032 TGCAGATACTAAGTTTCCAGGTGT 59.714 41.667 0.00 0.00 0.00 4.16
154 156 4.631813 GCAGATACTAAGTTTCCAGGTGTG 59.368 45.833 0.00 0.00 0.00 3.82
155 157 5.178797 CAGATACTAAGTTTCCAGGTGTGG 58.821 45.833 0.00 0.00 46.63 4.17
156 158 4.844655 AGATACTAAGTTTCCAGGTGTGGT 59.155 41.667 0.00 0.00 45.28 4.16
157 159 3.945640 ACTAAGTTTCCAGGTGTGGTT 57.054 42.857 0.00 0.00 45.28 3.67
158 160 3.551846 ACTAAGTTTCCAGGTGTGGTTG 58.448 45.455 0.00 0.00 45.28 3.77
159 161 2.818751 AAGTTTCCAGGTGTGGTTGA 57.181 45.000 0.00 0.00 45.28 3.18
160 162 2.818751 AGTTTCCAGGTGTGGTTGAA 57.181 45.000 0.00 0.00 45.28 2.69
161 163 3.312736 AGTTTCCAGGTGTGGTTGAAT 57.687 42.857 0.00 0.00 45.28 2.57
162 164 3.642141 AGTTTCCAGGTGTGGTTGAATT 58.358 40.909 0.00 0.00 45.28 2.17
163 165 3.384467 AGTTTCCAGGTGTGGTTGAATTG 59.616 43.478 0.00 0.00 45.28 2.32
164 166 3.304911 TTCCAGGTGTGGTTGAATTGA 57.695 42.857 0.00 0.00 45.28 2.57
165 167 2.582052 TCCAGGTGTGGTTGAATTGAC 58.418 47.619 0.00 0.00 45.28 3.18
166 168 2.092158 TCCAGGTGTGGTTGAATTGACA 60.092 45.455 0.00 0.00 45.28 3.58
167 169 2.692557 CCAGGTGTGGTTGAATTGACAA 59.307 45.455 0.00 0.00 39.30 3.18
168 170 3.490761 CCAGGTGTGGTTGAATTGACAAC 60.491 47.826 0.00 0.00 46.20 3.32
169 171 3.381272 CAGGTGTGGTTGAATTGACAACT 59.619 43.478 9.21 0.00 46.17 3.16
170 172 3.632145 AGGTGTGGTTGAATTGACAACTC 59.368 43.478 9.21 0.00 46.17 3.01
171 173 3.380004 GGTGTGGTTGAATTGACAACTCA 59.620 43.478 9.21 0.00 46.17 3.41
172 174 4.498009 GGTGTGGTTGAATTGACAACTCAG 60.498 45.833 0.00 0.00 46.17 3.35
173 175 3.066621 TGTGGTTGAATTGACAACTCAGC 59.933 43.478 5.07 5.07 46.17 4.26
174 176 3.316308 GTGGTTGAATTGACAACTCAGCT 59.684 43.478 12.25 0.00 46.17 4.24
175 177 3.316029 TGGTTGAATTGACAACTCAGCTG 59.684 43.478 7.63 7.63 46.17 4.24
176 178 3.303406 GTTGAATTGACAACTCAGCTGC 58.697 45.455 9.47 0.00 44.34 5.25
177 179 2.854963 TGAATTGACAACTCAGCTGCT 58.145 42.857 9.47 0.00 0.00 4.24
178 180 4.006780 TGAATTGACAACTCAGCTGCTA 57.993 40.909 9.47 0.00 0.00 3.49
179 181 4.388485 TGAATTGACAACTCAGCTGCTAA 58.612 39.130 9.47 0.00 0.00 3.09
180 182 5.005740 TGAATTGACAACTCAGCTGCTAAT 58.994 37.500 9.47 0.00 0.00 1.73
181 183 6.172630 TGAATTGACAACTCAGCTGCTAATA 58.827 36.000 9.47 0.00 0.00 0.98
182 184 6.092670 TGAATTGACAACTCAGCTGCTAATAC 59.907 38.462 9.47 0.00 0.00 1.89
183 185 4.808414 TGACAACTCAGCTGCTAATACT 57.192 40.909 9.47 0.00 0.00 2.12
184 186 5.152623 TGACAACTCAGCTGCTAATACTT 57.847 39.130 9.47 0.00 0.00 2.24
185 187 4.931601 TGACAACTCAGCTGCTAATACTTG 59.068 41.667 9.47 4.80 0.00 3.16
186 188 5.152623 ACAACTCAGCTGCTAATACTTGA 57.847 39.130 9.47 0.00 0.00 3.02
187 189 5.174395 ACAACTCAGCTGCTAATACTTGAG 58.826 41.667 9.47 6.55 0.00 3.02
188 190 5.047021 ACAACTCAGCTGCTAATACTTGAGA 60.047 40.000 9.47 1.04 0.00 3.27
189 191 5.667539 ACTCAGCTGCTAATACTTGAGAA 57.332 39.130 9.47 0.00 0.00 2.87
190 192 6.232581 ACTCAGCTGCTAATACTTGAGAAT 57.767 37.500 9.47 0.00 0.00 2.40
191 193 7.353414 ACTCAGCTGCTAATACTTGAGAATA 57.647 36.000 9.47 0.00 0.00 1.75
192 194 7.961351 ACTCAGCTGCTAATACTTGAGAATAT 58.039 34.615 9.47 0.00 0.00 1.28
193 195 8.428063 ACTCAGCTGCTAATACTTGAGAATATT 58.572 33.333 9.47 0.00 0.00 1.28
194 196 8.824159 TCAGCTGCTAATACTTGAGAATATTC 57.176 34.615 9.47 7.41 0.00 1.75
195 197 8.646004 TCAGCTGCTAATACTTGAGAATATTCT 58.354 33.333 17.96 17.96 41.00 2.40
196 198 9.270640 CAGCTGCTAATACTTGAGAATATTCTT 57.729 33.333 18.88 6.06 37.73 2.52
197 199 9.844257 AGCTGCTAATACTTGAGAATATTCTTT 57.156 29.630 18.88 10.54 37.73 2.52
198 200 9.875675 GCTGCTAATACTTGAGAATATTCTTTG 57.124 33.333 18.88 13.63 37.73 2.77
200 202 8.840321 TGCTAATACTTGAGAATATTCTTTGGC 58.160 33.333 18.88 18.99 37.73 4.52
201 203 9.061435 GCTAATACTTGAGAATATTCTTTGGCT 57.939 33.333 18.88 4.55 37.73 4.75
203 205 8.457238 AATACTTGAGAATATTCTTTGGCTCC 57.543 34.615 18.88 5.41 37.73 4.70
204 206 5.196695 ACTTGAGAATATTCTTTGGCTCCC 58.803 41.667 18.88 4.72 37.73 4.30
205 207 4.170468 TGAGAATATTCTTTGGCTCCCC 57.830 45.455 18.88 4.05 37.73 4.81
206 208 3.788142 TGAGAATATTCTTTGGCTCCCCT 59.212 43.478 18.88 0.00 37.73 4.79
207 209 4.230502 TGAGAATATTCTTTGGCTCCCCTT 59.769 41.667 18.88 0.00 37.73 3.95
208 210 4.540715 AGAATATTCTTTGGCTCCCCTTG 58.459 43.478 12.37 0.00 32.55 3.61
209 211 4.017130 AGAATATTCTTTGGCTCCCCTTGT 60.017 41.667 12.37 0.00 32.55 3.16
210 212 1.928868 ATTCTTTGGCTCCCCTTGTG 58.071 50.000 0.00 0.00 0.00 3.33
211 213 0.555769 TTCTTTGGCTCCCCTTGTGT 59.444 50.000 0.00 0.00 0.00 3.72
212 214 0.110486 TCTTTGGCTCCCCTTGTGTC 59.890 55.000 0.00 0.00 0.00 3.67
213 215 1.228124 TTTGGCTCCCCTTGTGTCG 60.228 57.895 0.00 0.00 0.00 4.35
214 216 1.701031 TTTGGCTCCCCTTGTGTCGA 61.701 55.000 0.00 0.00 0.00 4.20
215 217 1.701031 TTGGCTCCCCTTGTGTCGAA 61.701 55.000 0.00 0.00 0.00 3.71
216 218 1.299976 GGCTCCCCTTGTGTCGAAT 59.700 57.895 0.00 0.00 0.00 3.34
217 219 0.744771 GGCTCCCCTTGTGTCGAATC 60.745 60.000 0.00 0.00 0.00 2.52
218 220 0.036388 GCTCCCCTTGTGTCGAATCA 60.036 55.000 0.00 0.00 0.00 2.57
219 221 1.610624 GCTCCCCTTGTGTCGAATCAA 60.611 52.381 0.00 0.00 0.00 2.57
220 222 2.076863 CTCCCCTTGTGTCGAATCAAC 58.923 52.381 0.00 0.00 0.00 3.18
221 223 1.418264 TCCCCTTGTGTCGAATCAACA 59.582 47.619 0.00 0.00 0.00 3.33
222 224 2.158740 TCCCCTTGTGTCGAATCAACAA 60.159 45.455 0.00 0.00 0.00 2.83
223 225 2.621055 CCCCTTGTGTCGAATCAACAAA 59.379 45.455 0.00 0.00 0.00 2.83
224 226 3.255642 CCCCTTGTGTCGAATCAACAAAT 59.744 43.478 0.00 0.00 0.00 2.32
225 227 4.261994 CCCCTTGTGTCGAATCAACAAATT 60.262 41.667 0.00 0.00 0.00 1.82
226 228 5.288804 CCCTTGTGTCGAATCAACAAATTT 58.711 37.500 0.00 0.00 0.00 1.82
227 229 5.402270 CCCTTGTGTCGAATCAACAAATTTC 59.598 40.000 0.00 0.00 0.00 2.17
228 230 5.115472 CCTTGTGTCGAATCAACAAATTTCG 59.885 40.000 0.00 0.00 42.60 3.46
229 231 4.532276 TGTGTCGAATCAACAAATTTCGG 58.468 39.130 4.69 0.00 41.79 4.30
230 232 4.035792 TGTGTCGAATCAACAAATTTCGGT 59.964 37.500 4.69 0.00 41.79 4.69
231 233 4.973663 GTGTCGAATCAACAAATTTCGGTT 59.026 37.500 4.69 0.00 41.79 4.44
232 234 4.973051 TGTCGAATCAACAAATTTCGGTTG 59.027 37.500 12.82 12.82 44.35 3.77
242 244 8.655378 CAACAAATTTCGGTTGAATACTCTAC 57.345 34.615 13.48 0.00 45.50 2.59
243 245 7.373778 ACAAATTTCGGTTGAATACTCTACC 57.626 36.000 0.00 0.00 42.23 3.18
244 246 6.373495 ACAAATTTCGGTTGAATACTCTACCC 59.627 38.462 0.00 0.00 42.56 3.69
245 247 5.952347 ATTTCGGTTGAATACTCTACCCT 57.048 39.130 0.00 0.00 42.56 4.34
246 248 4.996788 TTCGGTTGAATACTCTACCCTC 57.003 45.455 0.00 0.00 42.56 4.30
247 249 2.947652 TCGGTTGAATACTCTACCCTCG 59.052 50.000 0.00 0.00 42.56 4.63
248 250 2.947652 CGGTTGAATACTCTACCCTCGA 59.052 50.000 0.00 0.00 42.56 4.04
249 251 3.379372 CGGTTGAATACTCTACCCTCGAA 59.621 47.826 0.00 0.00 42.56 3.71
250 252 4.142315 CGGTTGAATACTCTACCCTCGAAA 60.142 45.833 0.00 0.00 42.56 3.46
251 253 5.622914 CGGTTGAATACTCTACCCTCGAAAA 60.623 44.000 0.00 0.00 42.56 2.29
252 254 5.579904 GGTTGAATACTCTACCCTCGAAAAC 59.420 44.000 0.00 0.00 40.45 2.43
253 255 6.396450 GTTGAATACTCTACCCTCGAAAACT 58.604 40.000 0.00 0.00 0.00 2.66
254 256 7.363268 GGTTGAATACTCTACCCTCGAAAACTA 60.363 40.741 0.00 0.00 40.45 2.24
255 257 7.893124 TGAATACTCTACCCTCGAAAACTAT 57.107 36.000 0.00 0.00 0.00 2.12
256 258 8.302515 TGAATACTCTACCCTCGAAAACTATT 57.697 34.615 0.00 0.00 0.00 1.73
257 259 8.195436 TGAATACTCTACCCTCGAAAACTATTG 58.805 37.037 0.00 0.00 0.00 1.90
258 260 4.756502 ACTCTACCCTCGAAAACTATTGC 58.243 43.478 0.00 0.00 0.00 3.56
259 261 3.777478 TCTACCCTCGAAAACTATTGCG 58.223 45.455 0.00 0.00 39.05 4.85
260 262 2.754946 ACCCTCGAAAACTATTGCGA 57.245 45.000 0.00 0.00 44.32 5.10
261 263 3.261981 ACCCTCGAAAACTATTGCGAT 57.738 42.857 0.00 0.00 45.35 4.58
262 264 3.195661 ACCCTCGAAAACTATTGCGATC 58.804 45.455 0.00 0.00 45.35 3.69
263 265 2.544267 CCCTCGAAAACTATTGCGATCC 59.456 50.000 0.00 0.00 45.35 3.36
264 266 2.544267 CCTCGAAAACTATTGCGATCCC 59.456 50.000 0.00 0.00 45.35 3.85
265 267 2.544267 CTCGAAAACTATTGCGATCCCC 59.456 50.000 0.00 0.00 45.35 4.81
266 268 2.169769 TCGAAAACTATTGCGATCCCCT 59.830 45.455 0.00 0.00 41.68 4.79
267 269 3.385433 TCGAAAACTATTGCGATCCCCTA 59.615 43.478 0.00 0.00 41.68 3.53
268 270 4.039973 TCGAAAACTATTGCGATCCCCTAT 59.960 41.667 0.00 0.00 41.68 2.57
269 271 5.244402 TCGAAAACTATTGCGATCCCCTATA 59.756 40.000 0.00 0.00 41.68 1.31
270 272 5.347907 CGAAAACTATTGCGATCCCCTATAC 59.652 44.000 0.00 0.00 40.19 1.47
271 273 6.435292 AAAACTATTGCGATCCCCTATACT 57.565 37.500 0.00 0.00 0.00 2.12
272 274 6.435292 AAACTATTGCGATCCCCTATACTT 57.565 37.500 0.00 0.00 0.00 2.24
273 275 5.407407 ACTATTGCGATCCCCTATACTTG 57.593 43.478 0.00 0.00 0.00 3.16
274 276 4.838986 ACTATTGCGATCCCCTATACTTGT 59.161 41.667 0.00 0.00 0.00 3.16
275 277 3.469008 TTGCGATCCCCTATACTTGTG 57.531 47.619 0.00 0.00 0.00 3.33
276 278 1.691976 TGCGATCCCCTATACTTGTGG 59.308 52.381 0.00 0.00 0.00 4.17
277 279 1.002087 GCGATCCCCTATACTTGTGGG 59.998 57.143 0.00 0.00 40.59 4.61
278 280 2.326428 CGATCCCCTATACTTGTGGGT 58.674 52.381 0.00 0.00 39.31 4.51
279 281 2.704065 CGATCCCCTATACTTGTGGGTT 59.296 50.000 0.00 0.00 39.31 4.11
280 282 3.899360 CGATCCCCTATACTTGTGGGTTA 59.101 47.826 0.00 0.00 39.31 2.85
281 283 4.530946 CGATCCCCTATACTTGTGGGTTAT 59.469 45.833 0.00 0.00 39.31 1.89
282 284 5.337330 CGATCCCCTATACTTGTGGGTTATC 60.337 48.000 0.00 0.00 39.31 1.75
283 285 4.898268 TCCCCTATACTTGTGGGTTATCA 58.102 43.478 0.00 0.00 39.31 2.15
284 286 4.905456 TCCCCTATACTTGTGGGTTATCAG 59.095 45.833 0.00 0.00 39.31 2.90
285 287 4.041691 CCCCTATACTTGTGGGTTATCAGG 59.958 50.000 0.00 0.00 39.31 3.86
286 288 4.505039 CCCTATACTTGTGGGTTATCAGGC 60.505 50.000 0.00 0.00 36.32 4.85
287 289 4.102524 CCTATACTTGTGGGTTATCAGGCA 59.897 45.833 0.00 0.00 0.00 4.75
288 290 2.200373 ACTTGTGGGTTATCAGGCAC 57.800 50.000 0.00 0.00 0.00 5.01
289 291 1.271926 ACTTGTGGGTTATCAGGCACC 60.272 52.381 0.00 0.00 0.00 5.01
290 292 0.774276 TTGTGGGTTATCAGGCACCA 59.226 50.000 0.00 0.00 34.36 4.17
291 293 0.774276 TGTGGGTTATCAGGCACCAA 59.226 50.000 0.00 0.00 34.36 3.67
292 294 1.357420 TGTGGGTTATCAGGCACCAAT 59.643 47.619 0.00 0.00 34.36 3.16
293 295 2.578480 TGTGGGTTATCAGGCACCAATA 59.422 45.455 0.00 0.00 34.36 1.90
294 296 3.214328 GTGGGTTATCAGGCACCAATAG 58.786 50.000 0.00 0.00 34.36 1.73
295 297 2.849943 TGGGTTATCAGGCACCAATAGT 59.150 45.455 0.00 0.00 34.36 2.12
296 298 4.041464 TGGGTTATCAGGCACCAATAGTA 58.959 43.478 0.00 0.00 34.36 1.82
297 299 4.141574 TGGGTTATCAGGCACCAATAGTAC 60.142 45.833 0.00 0.00 34.36 2.73
298 300 4.056050 GGTTATCAGGCACCAATAGTACG 58.944 47.826 0.00 0.00 32.74 3.67
299 301 4.442472 GGTTATCAGGCACCAATAGTACGT 60.442 45.833 0.00 0.00 32.74 3.57
300 302 5.221303 GGTTATCAGGCACCAATAGTACGTA 60.221 44.000 0.00 0.00 32.74 3.57
301 303 6.275335 GTTATCAGGCACCAATAGTACGTAA 58.725 40.000 0.00 0.00 0.00 3.18
302 304 4.804868 TCAGGCACCAATAGTACGTAAA 57.195 40.909 0.00 0.00 0.00 2.01
303 305 5.149973 TCAGGCACCAATAGTACGTAAAA 57.850 39.130 0.00 0.00 0.00 1.52
304 306 5.549347 TCAGGCACCAATAGTACGTAAAAA 58.451 37.500 0.00 0.00 0.00 1.94
305 307 5.409214 TCAGGCACCAATAGTACGTAAAAAC 59.591 40.000 0.00 0.00 0.00 2.43
306 308 5.179742 CAGGCACCAATAGTACGTAAAAACA 59.820 40.000 0.00 0.00 0.00 2.83
307 309 5.410439 AGGCACCAATAGTACGTAAAAACAG 59.590 40.000 0.00 0.00 0.00 3.16
308 310 5.179929 GGCACCAATAGTACGTAAAAACAGT 59.820 40.000 0.00 0.00 0.00 3.55
309 311 6.301861 GCACCAATAGTACGTAAAAACAGTC 58.698 40.000 0.00 0.00 0.00 3.51
310 312 6.146673 GCACCAATAGTACGTAAAAACAGTCT 59.853 38.462 0.00 0.00 0.00 3.24
311 313 7.329226 GCACCAATAGTACGTAAAAACAGTCTA 59.671 37.037 0.00 0.00 0.00 2.59
312 314 8.642020 CACCAATAGTACGTAAAAACAGTCTAC 58.358 37.037 0.00 0.00 0.00 2.59
313 315 7.814587 ACCAATAGTACGTAAAAACAGTCTACC 59.185 37.037 0.00 0.00 0.00 3.18
314 316 7.814107 CCAATAGTACGTAAAAACAGTCTACCA 59.186 37.037 0.00 0.00 0.00 3.25
315 317 9.195411 CAATAGTACGTAAAAACAGTCTACCAA 57.805 33.333 0.00 0.00 0.00 3.67
316 318 8.976986 ATAGTACGTAAAAACAGTCTACCAAG 57.023 34.615 0.00 0.00 0.00 3.61
317 319 7.042797 AGTACGTAAAAACAGTCTACCAAGA 57.957 36.000 0.00 0.00 0.00 3.02
318 320 7.491682 AGTACGTAAAAACAGTCTACCAAGAA 58.508 34.615 0.00 0.00 32.16 2.52
319 321 8.146412 AGTACGTAAAAACAGTCTACCAAGAAT 58.854 33.333 0.00 0.00 32.16 2.40
320 322 9.410556 GTACGTAAAAACAGTCTACCAAGAATA 57.589 33.333 0.00 0.00 32.16 1.75
321 323 8.891671 ACGTAAAAACAGTCTACCAAGAATAA 57.108 30.769 0.00 0.00 32.16 1.40
322 324 9.498176 ACGTAAAAACAGTCTACCAAGAATAAT 57.502 29.630 0.00 0.00 32.16 1.28
330 332 9.823647 ACAGTCTACCAAGAATAATTAGACATG 57.176 33.333 9.17 0.00 40.70 3.21
333 335 8.969267 GTCTACCAAGAATAATTAGACATGACG 58.031 37.037 0.00 0.00 38.91 4.35
334 336 8.141909 TCTACCAAGAATAATTAGACATGACGG 58.858 37.037 0.00 0.00 0.00 4.79
335 337 6.884832 ACCAAGAATAATTAGACATGACGGA 58.115 36.000 0.00 0.00 0.00 4.69
336 338 7.509546 ACCAAGAATAATTAGACATGACGGAT 58.490 34.615 0.00 0.00 0.00 4.18
337 339 7.993183 ACCAAGAATAATTAGACATGACGGATT 59.007 33.333 0.00 2.18 0.00 3.01
338 340 8.285394 CCAAGAATAATTAGACATGACGGATTG 58.715 37.037 0.00 0.00 0.00 2.67
339 341 7.426929 AGAATAATTAGACATGACGGATTGC 57.573 36.000 0.00 0.00 0.00 3.56
340 342 6.992123 AGAATAATTAGACATGACGGATTGCA 59.008 34.615 0.00 0.00 0.00 4.08
341 343 7.498900 AGAATAATTAGACATGACGGATTGCAA 59.501 33.333 0.00 0.00 0.00 4.08
342 344 7.750229 ATAATTAGACATGACGGATTGCAAT 57.250 32.000 12.83 12.83 0.00 3.56
343 345 5.679734 ATTAGACATGACGGATTGCAATC 57.320 39.130 27.91 27.91 34.66 2.67
344 346 2.989909 AGACATGACGGATTGCAATCA 58.010 42.857 34.08 20.12 37.15 2.57
345 347 3.346315 AGACATGACGGATTGCAATCAA 58.654 40.909 34.08 19.81 37.15 2.57
346 348 3.949754 AGACATGACGGATTGCAATCAAT 59.050 39.130 34.08 23.78 45.04 2.57
347 349 5.125356 AGACATGACGGATTGCAATCAATA 58.875 37.500 34.08 20.20 42.60 1.90
348 350 5.237996 AGACATGACGGATTGCAATCAATAG 59.762 40.000 34.08 24.47 42.60 1.73
349 351 3.969117 TGACGGATTGCAATCAATAGC 57.031 42.857 34.08 18.93 42.60 2.97
350 352 3.277715 TGACGGATTGCAATCAATAGCA 58.722 40.909 34.08 22.40 42.60 3.49
359 361 6.954616 TTGCAATCAATAGCAAGAACAATG 57.045 33.333 0.00 0.00 44.98 2.82
360 362 6.270156 TGCAATCAATAGCAAGAACAATGA 57.730 33.333 0.00 0.00 37.90 2.57
361 363 6.689554 TGCAATCAATAGCAAGAACAATGAA 58.310 32.000 0.00 0.00 37.90 2.57
362 364 7.153315 TGCAATCAATAGCAAGAACAATGAAA 58.847 30.769 0.00 0.00 37.90 2.69
363 365 7.820386 TGCAATCAATAGCAAGAACAATGAAAT 59.180 29.630 0.00 0.00 37.90 2.17
364 366 8.325997 GCAATCAATAGCAAGAACAATGAAATC 58.674 33.333 0.00 0.00 0.00 2.17
365 367 9.582431 CAATCAATAGCAAGAACAATGAAATCT 57.418 29.630 0.00 0.00 0.00 2.40
369 371 9.459640 CAATAGCAAGAACAATGAAATCTATGG 57.540 33.333 0.00 0.00 0.00 2.74
370 372 6.461110 AGCAAGAACAATGAAATCTATGGG 57.539 37.500 0.00 0.00 0.00 4.00
371 373 5.045872 GCAAGAACAATGAAATCTATGGGC 58.954 41.667 0.00 0.00 0.00 5.36
372 374 5.394443 GCAAGAACAATGAAATCTATGGGCA 60.394 40.000 0.00 0.00 0.00 5.36
373 375 6.632909 CAAGAACAATGAAATCTATGGGCAA 58.367 36.000 0.00 0.00 0.00 4.52
374 376 6.855763 AGAACAATGAAATCTATGGGCAAA 57.144 33.333 0.00 0.00 0.00 3.68
375 377 7.427989 AGAACAATGAAATCTATGGGCAAAT 57.572 32.000 0.00 0.00 0.00 2.32
376 378 8.537728 AGAACAATGAAATCTATGGGCAAATA 57.462 30.769 0.00 0.00 0.00 1.40
377 379 8.980596 AGAACAATGAAATCTATGGGCAAATAA 58.019 29.630 0.00 0.00 0.00 1.40
378 380 9.768662 GAACAATGAAATCTATGGGCAAATAAT 57.231 29.630 0.00 0.00 0.00 1.28
380 382 9.768662 ACAATGAAATCTATGGGCAAATAATTC 57.231 29.630 0.00 0.00 0.00 2.17
381 383 9.211485 CAATGAAATCTATGGGCAAATAATTCC 57.789 33.333 0.00 0.00 0.00 3.01
382 384 8.731591 ATGAAATCTATGGGCAAATAATTCCT 57.268 30.769 0.00 0.00 0.00 3.36
383 385 9.827198 ATGAAATCTATGGGCAAATAATTCCTA 57.173 29.630 0.00 0.00 0.00 2.94
384 386 9.827198 TGAAATCTATGGGCAAATAATTCCTAT 57.173 29.630 0.00 0.00 0.00 2.57
404 406 8.806429 TCCTATTTGCAAGAATAAGAACATCA 57.194 30.769 0.00 0.00 0.00 3.07
405 407 9.412460 TCCTATTTGCAAGAATAAGAACATCAT 57.588 29.630 0.00 0.00 0.00 2.45
421 423 8.930846 AGAACATCATTAATTCTTCCCATAGG 57.069 34.615 0.00 0.00 28.03 2.57
422 424 8.506083 AGAACATCATTAATTCTTCCCATAGGT 58.494 33.333 0.00 0.00 28.03 3.08
423 425 9.136323 GAACATCATTAATTCTTCCCATAGGTT 57.864 33.333 0.00 0.00 0.00 3.50
424 426 9.492730 AACATCATTAATTCTTCCCATAGGTTT 57.507 29.630 0.00 0.00 0.00 3.27
425 427 9.492730 ACATCATTAATTCTTCCCATAGGTTTT 57.507 29.630 0.00 0.00 0.00 2.43
449 451 7.859325 TTTAATAGTAGAATCCACCAAGTGC 57.141 36.000 0.00 0.00 31.34 4.40
450 452 5.435686 AATAGTAGAATCCACCAAGTGCA 57.564 39.130 0.00 0.00 31.34 4.57
451 453 3.788227 AGTAGAATCCACCAAGTGCAA 57.212 42.857 0.00 0.00 31.34 4.08
452 454 4.098914 AGTAGAATCCACCAAGTGCAAA 57.901 40.909 0.00 0.00 31.34 3.68
453 455 4.666512 AGTAGAATCCACCAAGTGCAAAT 58.333 39.130 0.00 0.00 31.34 2.32
454 456 5.079643 AGTAGAATCCACCAAGTGCAAATT 58.920 37.500 0.00 0.00 31.34 1.82
455 457 4.961438 AGAATCCACCAAGTGCAAATTT 57.039 36.364 0.00 0.00 31.34 1.82
456 458 6.719370 AGTAGAATCCACCAAGTGCAAATTTA 59.281 34.615 0.00 0.00 31.34 1.40
457 459 6.418057 AGAATCCACCAAGTGCAAATTTAA 57.582 33.333 0.00 0.00 31.34 1.52
458 460 6.825610 AGAATCCACCAAGTGCAAATTTAAA 58.174 32.000 0.00 0.00 31.34 1.52
459 461 6.930722 AGAATCCACCAAGTGCAAATTTAAAG 59.069 34.615 0.00 0.00 31.34 1.85
460 462 5.860941 TCCACCAAGTGCAAATTTAAAGA 57.139 34.783 0.00 0.00 31.34 2.52
461 463 5.841810 TCCACCAAGTGCAAATTTAAAGAG 58.158 37.500 0.00 0.00 31.34 2.85
462 464 5.596361 TCCACCAAGTGCAAATTTAAAGAGA 59.404 36.000 0.00 0.00 31.34 3.10
463 465 6.097554 TCCACCAAGTGCAAATTTAAAGAGAA 59.902 34.615 0.00 0.00 31.34 2.87
464 466 6.930722 CCACCAAGTGCAAATTTAAAGAGAAT 59.069 34.615 0.00 0.00 31.34 2.40
465 467 7.442062 CCACCAAGTGCAAATTTAAAGAGAATT 59.558 33.333 0.00 0.00 31.34 2.17
466 468 8.490355 CACCAAGTGCAAATTTAAAGAGAATTC 58.510 33.333 0.00 0.00 0.00 2.17
467 469 8.424133 ACCAAGTGCAAATTTAAAGAGAATTCT 58.576 29.630 7.95 7.95 34.29 2.40
468 470 9.264719 CCAAGTGCAAATTTAAAGAGAATTCTT 57.735 29.630 9.87 0.00 45.51 2.52
483 485 9.535878 AAGAGAATTCTTCAATATCGGTAAGAC 57.464 33.333 9.87 0.00 39.46 3.01
484 486 8.145122 AGAGAATTCTTCAATATCGGTAAGACC 58.855 37.037 9.87 0.00 34.05 3.85
485 487 7.792032 AGAATTCTTCAATATCGGTAAGACCA 58.208 34.615 0.88 0.00 38.47 4.02
486 488 8.265055 AGAATTCTTCAATATCGGTAAGACCAA 58.735 33.333 0.88 0.00 38.47 3.67
487 489 8.438676 AATTCTTCAATATCGGTAAGACCAAG 57.561 34.615 0.00 0.00 38.47 3.61
488 490 6.540438 TCTTCAATATCGGTAAGACCAAGT 57.460 37.500 0.00 0.00 38.47 3.16
489 491 7.649533 TCTTCAATATCGGTAAGACCAAGTA 57.350 36.000 0.00 0.00 38.47 2.24
490 492 7.486647 TCTTCAATATCGGTAAGACCAAGTAC 58.513 38.462 0.00 0.00 38.47 2.73
491 493 6.778834 TCAATATCGGTAAGACCAAGTACA 57.221 37.500 0.00 0.00 38.47 2.90
492 494 7.356089 TCAATATCGGTAAGACCAAGTACAT 57.644 36.000 0.00 0.00 38.47 2.29
493 495 7.431249 TCAATATCGGTAAGACCAAGTACATC 58.569 38.462 0.00 0.00 38.47 3.06
494 496 6.971726 ATATCGGTAAGACCAAGTACATCA 57.028 37.500 0.00 0.00 38.47 3.07
495 497 4.445452 TCGGTAAGACCAAGTACATCAC 57.555 45.455 0.00 0.00 38.47 3.06
496 498 3.827876 TCGGTAAGACCAAGTACATCACA 59.172 43.478 0.00 0.00 38.47 3.58
497 499 4.464951 TCGGTAAGACCAAGTACATCACAT 59.535 41.667 0.00 0.00 38.47 3.21
498 500 5.653330 TCGGTAAGACCAAGTACATCACATA 59.347 40.000 0.00 0.00 38.47 2.29
499 501 6.153170 TCGGTAAGACCAAGTACATCACATAA 59.847 38.462 0.00 0.00 38.47 1.90
500 502 6.814644 CGGTAAGACCAAGTACATCACATAAA 59.185 38.462 0.00 0.00 38.47 1.40
501 503 7.010183 CGGTAAGACCAAGTACATCACATAAAG 59.990 40.741 0.00 0.00 38.47 1.85
502 504 8.038944 GGTAAGACCAAGTACATCACATAAAGA 58.961 37.037 0.00 0.00 38.42 2.52
503 505 9.601217 GTAAGACCAAGTACATCACATAAAGAT 57.399 33.333 0.00 0.00 0.00 2.40
505 507 8.723942 AGACCAAGTACATCACATAAAGATTC 57.276 34.615 0.00 0.00 0.00 2.52
506 508 8.543774 AGACCAAGTACATCACATAAAGATTCT 58.456 33.333 0.00 0.00 0.00 2.40
507 509 8.498054 ACCAAGTACATCACATAAAGATTCTG 57.502 34.615 0.00 0.00 0.00 3.02
508 510 7.554118 ACCAAGTACATCACATAAAGATTCTGG 59.446 37.037 0.00 0.00 0.00 3.86
509 511 7.770433 CCAAGTACATCACATAAAGATTCTGGA 59.230 37.037 0.00 0.00 0.00 3.86
510 512 9.166173 CAAGTACATCACATAAAGATTCTGGAA 57.834 33.333 0.00 0.00 0.00 3.53
511 513 9.911788 AAGTACATCACATAAAGATTCTGGAAT 57.088 29.630 0.00 0.00 0.00 3.01
512 514 9.911788 AGTACATCACATAAAGATTCTGGAATT 57.088 29.630 0.00 0.00 0.00 2.17
513 515 9.941664 GTACATCACATAAAGATTCTGGAATTG 57.058 33.333 0.00 0.00 0.00 2.32
514 516 8.812513 ACATCACATAAAGATTCTGGAATTGA 57.187 30.769 0.00 0.00 0.00 2.57
515 517 9.246670 ACATCACATAAAGATTCTGGAATTGAA 57.753 29.630 0.00 0.00 0.00 2.69
516 518 9.731819 CATCACATAAAGATTCTGGAATTGAAG 57.268 33.333 0.00 0.00 0.00 3.02
517 519 9.690913 ATCACATAAAGATTCTGGAATTGAAGA 57.309 29.630 0.00 0.00 0.00 2.87
518 520 9.519191 TCACATAAAGATTCTGGAATTGAAGAA 57.481 29.630 2.70 2.70 36.87 2.52
523 525 7.830099 AAGATTCTGGAATTGAAGAAACACT 57.170 32.000 4.07 2.82 36.09 3.55
524 526 8.924511 AAGATTCTGGAATTGAAGAAACACTA 57.075 30.769 4.07 0.00 36.09 2.74
525 527 8.558973 AGATTCTGGAATTGAAGAAACACTAG 57.441 34.615 4.07 0.00 36.09 2.57
526 528 8.378565 AGATTCTGGAATTGAAGAAACACTAGA 58.621 33.333 0.00 0.00 36.09 2.43
527 529 8.924511 ATTCTGGAATTGAAGAAACACTAGAA 57.075 30.769 0.00 0.00 36.09 2.10
528 530 7.730364 TCTGGAATTGAAGAAACACTAGAAC 57.270 36.000 0.00 0.00 0.00 3.01
529 531 6.710744 TCTGGAATTGAAGAAACACTAGAACC 59.289 38.462 0.00 0.00 0.00 3.62
530 532 5.768164 TGGAATTGAAGAAACACTAGAACCC 59.232 40.000 0.00 0.00 0.00 4.11
531 533 5.768164 GGAATTGAAGAAACACTAGAACCCA 59.232 40.000 0.00 0.00 0.00 4.51
532 534 6.264518 GGAATTGAAGAAACACTAGAACCCAA 59.735 38.462 0.00 0.00 0.00 4.12
533 535 6.884280 ATTGAAGAAACACTAGAACCCAAG 57.116 37.500 0.00 0.00 0.00 3.61
534 536 5.367945 TGAAGAAACACTAGAACCCAAGT 57.632 39.130 0.00 0.00 0.00 3.16
535 537 5.365619 TGAAGAAACACTAGAACCCAAGTC 58.634 41.667 0.00 0.00 0.00 3.01
536 538 5.104693 TGAAGAAACACTAGAACCCAAGTCA 60.105 40.000 0.00 0.00 0.00 3.41
537 539 4.704965 AGAAACACTAGAACCCAAGTCAC 58.295 43.478 0.00 0.00 0.00 3.67
538 540 4.163458 AGAAACACTAGAACCCAAGTCACA 59.837 41.667 0.00 0.00 0.00 3.58
539 541 4.497291 AACACTAGAACCCAAGTCACAA 57.503 40.909 0.00 0.00 0.00 3.33
540 542 4.497291 ACACTAGAACCCAAGTCACAAA 57.503 40.909 0.00 0.00 0.00 2.83
541 543 4.850680 ACACTAGAACCCAAGTCACAAAA 58.149 39.130 0.00 0.00 0.00 2.44
542 544 5.258051 ACACTAGAACCCAAGTCACAAAAA 58.742 37.500 0.00 0.00 0.00 1.94
543 545 5.357032 ACACTAGAACCCAAGTCACAAAAAG 59.643 40.000 0.00 0.00 0.00 2.27
544 546 3.801114 AGAACCCAAGTCACAAAAAGC 57.199 42.857 0.00 0.00 0.00 3.51
545 547 3.096092 AGAACCCAAGTCACAAAAAGCA 58.904 40.909 0.00 0.00 0.00 3.91
546 548 3.513515 AGAACCCAAGTCACAAAAAGCAA 59.486 39.130 0.00 0.00 0.00 3.91
547 549 3.971245 ACCCAAGTCACAAAAAGCAAA 57.029 38.095 0.00 0.00 0.00 3.68
548 550 4.278975 ACCCAAGTCACAAAAAGCAAAA 57.721 36.364 0.00 0.00 0.00 2.44
549 551 4.000325 ACCCAAGTCACAAAAAGCAAAAC 59.000 39.130 0.00 0.00 0.00 2.43
550 552 3.999663 CCCAAGTCACAAAAAGCAAAACA 59.000 39.130 0.00 0.00 0.00 2.83
551 553 4.142924 CCCAAGTCACAAAAAGCAAAACAC 60.143 41.667 0.00 0.00 0.00 3.32
552 554 4.690280 CCAAGTCACAAAAAGCAAAACACT 59.310 37.500 0.00 0.00 0.00 3.55
553 555 5.163963 CCAAGTCACAAAAAGCAAAACACTC 60.164 40.000 0.00 0.00 0.00 3.51
554 556 5.132897 AGTCACAAAAAGCAAAACACTCA 57.867 34.783 0.00 0.00 0.00 3.41
555 557 5.723295 AGTCACAAAAAGCAAAACACTCAT 58.277 33.333 0.00 0.00 0.00 2.90
556 558 6.862209 AGTCACAAAAAGCAAAACACTCATA 58.138 32.000 0.00 0.00 0.00 2.15
557 559 7.319646 AGTCACAAAAAGCAAAACACTCATAA 58.680 30.769 0.00 0.00 0.00 1.90
558 560 7.981225 AGTCACAAAAAGCAAAACACTCATAAT 59.019 29.630 0.00 0.00 0.00 1.28
559 561 8.603181 GTCACAAAAAGCAAAACACTCATAATT 58.397 29.630 0.00 0.00 0.00 1.40
560 562 9.160496 TCACAAAAAGCAAAACACTCATAATTT 57.840 25.926 0.00 0.00 0.00 1.82
585 587 4.954089 AGGGTTAATTATCCTTTTGCCCA 58.046 39.130 11.51 0.00 36.17 5.36
659 661 3.760035 CCCTAGTCCGTGCGCACT 61.760 66.667 35.27 20.86 0.00 4.40
874 876 2.983930 GCGACAGAGAGCACGACCT 61.984 63.158 0.00 0.00 0.00 3.85
885 887 2.048877 ACGACCTTAACCACGGCG 60.049 61.111 4.80 4.80 0.00 6.46
886 888 2.259204 CGACCTTAACCACGGCGA 59.741 61.111 16.62 0.00 0.00 5.54
887 889 1.804326 CGACCTTAACCACGGCGAG 60.804 63.158 16.62 5.31 0.00 5.03
888 890 1.588082 GACCTTAACCACGGCGAGA 59.412 57.895 16.62 0.00 0.00 4.04
896 898 1.450491 CCACGGCGAGAGAGAGAGA 60.450 63.158 16.62 0.00 0.00 3.10
908 910 1.277842 AGAGAGAGAGAGAGCACGACA 59.722 52.381 0.00 0.00 0.00 4.35
1060 1062 2.982130 GGGAGCGTGTGGAGATGT 59.018 61.111 0.00 0.00 0.00 3.06
1063 1065 1.103803 GGAGCGTGTGGAGATGTCTA 58.896 55.000 0.00 0.00 0.00 2.59
1066 1068 1.683917 AGCGTGTGGAGATGTCTATCC 59.316 52.381 0.00 0.00 33.64 2.59
1113 1115 2.744202 CGTTGATTGGAGGGTTTCTCAG 59.256 50.000 0.00 0.00 44.19 3.35
1413 1445 2.230025 TGACAGAGAGCTAGCTGTTGAC 59.770 50.000 24.99 17.80 44.77 3.18
1428 1512 4.702131 GCTGTTGACCTTAGGATGTTGAAT 59.298 41.667 4.77 0.00 0.00 2.57
1497 1715 7.489574 TTGCAAATACTTTTGGGAATTTGTC 57.510 32.000 0.00 2.85 42.09 3.18
1498 1716 6.586344 TGCAAATACTTTTGGGAATTTGTCA 58.414 32.000 8.05 4.83 42.09 3.58
1564 1782 8.551682 AAAGGCATGAATTATGGAGGAATTTA 57.448 30.769 0.00 0.00 37.26 1.40
1617 1835 8.755028 ACCTAGTTAAAATGTTGGTCAAAGTTT 58.245 29.630 0.00 0.00 0.00 2.66
1994 2220 2.058595 CGGATGGGGACTCGAACCT 61.059 63.158 7.98 0.00 0.00 3.50
2152 2379 1.157257 TGTTTGCACACGCGTGAGAT 61.157 50.000 42.94 20.79 46.80 2.75
2175 2402 4.249661 TGGTTTTCCTTTGTTTTGCACTC 58.750 39.130 0.00 0.00 41.38 3.51
2293 2520 6.325286 AGTGGCACTTGGTTTAGGATTTAAAA 59.675 34.615 15.88 0.00 0.00 1.52
2510 2749 5.431420 TGCAACACAAGTACCATTACAAG 57.569 39.130 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.103048 CAGTAACAACAGAAAAGTAAATAAGCG 57.897 33.333 0.00 0.00 0.00 4.68
5 6 9.946165 ACAGTAACAACAGAAAAGTAAATAAGC 57.054 29.630 0.00 0.00 0.00 3.09
20 22 8.719560 TTGTAGTGATTGTAACAGTAACAACA 57.280 30.769 0.00 0.00 39.51 3.33
48 50 9.930693 AAGACAACAAAAGTAATGTTTTTGGTA 57.069 25.926 13.14 0.00 41.98 3.25
49 51 8.840833 AAGACAACAAAAGTAATGTTTTTGGT 57.159 26.923 13.14 5.50 44.01 3.67
55 57 9.705290 AAAAGTGAAGACAACAAAAGTAATGTT 57.295 25.926 0.00 0.00 41.50 2.71
60 62 9.615295 GTAACAAAAGTGAAGACAACAAAAGTA 57.385 29.630 0.00 0.00 0.00 2.24
61 63 7.597369 GGTAACAAAAGTGAAGACAACAAAAGT 59.403 33.333 0.00 0.00 0.00 2.66
62 64 7.201316 CGGTAACAAAAGTGAAGACAACAAAAG 60.201 37.037 0.00 0.00 0.00 2.27
63 65 6.583050 CGGTAACAAAAGTGAAGACAACAAAA 59.417 34.615 0.00 0.00 0.00 2.44
64 66 6.087522 CGGTAACAAAAGTGAAGACAACAAA 58.912 36.000 0.00 0.00 0.00 2.83
65 67 5.181622 ACGGTAACAAAAGTGAAGACAACAA 59.818 36.000 0.00 0.00 0.00 2.83
66 68 4.696402 ACGGTAACAAAAGTGAAGACAACA 59.304 37.500 0.00 0.00 0.00 3.33
67 69 5.225899 ACGGTAACAAAAGTGAAGACAAC 57.774 39.130 0.00 0.00 0.00 3.32
68 70 5.883503 AACGGTAACAAAAGTGAAGACAA 57.116 34.783 0.00 0.00 0.00 3.18
69 71 5.294060 GGTAACGGTAACAAAAGTGAAGACA 59.706 40.000 0.00 0.00 0.00 3.41
70 72 5.294060 TGGTAACGGTAACAAAAGTGAAGAC 59.706 40.000 0.00 0.00 42.51 3.01
71 73 5.294060 GTGGTAACGGTAACAAAAGTGAAGA 59.706 40.000 0.00 0.00 42.51 2.87
72 74 5.504392 GTGGTAACGGTAACAAAAGTGAAG 58.496 41.667 0.00 0.00 42.51 3.02
73 75 4.335037 GGTGGTAACGGTAACAAAAGTGAA 59.665 41.667 0.00 0.00 42.51 3.18
74 76 3.876320 GGTGGTAACGGTAACAAAAGTGA 59.124 43.478 0.00 0.00 42.51 3.41
75 77 3.626670 TGGTGGTAACGGTAACAAAAGTG 59.373 43.478 0.00 0.00 42.51 3.16
76 78 3.627123 GTGGTGGTAACGGTAACAAAAGT 59.373 43.478 0.00 0.00 42.51 2.66
77 79 3.878699 AGTGGTGGTAACGGTAACAAAAG 59.121 43.478 0.00 0.00 42.51 2.27
78 80 3.883669 AGTGGTGGTAACGGTAACAAAA 58.116 40.909 0.00 0.00 42.51 2.44
79 81 3.557228 AGTGGTGGTAACGGTAACAAA 57.443 42.857 0.00 0.00 42.51 2.83
80 82 4.282957 TGATAGTGGTGGTAACGGTAACAA 59.717 41.667 0.00 0.00 42.51 2.83
81 83 3.831333 TGATAGTGGTGGTAACGGTAACA 59.169 43.478 0.00 0.00 42.51 2.41
82 84 4.454728 TGATAGTGGTGGTAACGGTAAC 57.545 45.455 0.00 0.00 42.51 2.50
83 85 6.982160 ATATGATAGTGGTGGTAACGGTAA 57.018 37.500 0.00 0.00 42.51 2.85
84 86 6.982160 AATATGATAGTGGTGGTAACGGTA 57.018 37.500 0.00 0.00 42.51 4.02
85 87 5.881923 AATATGATAGTGGTGGTAACGGT 57.118 39.130 0.00 0.00 42.51 4.83
86 88 6.989659 AGTAATATGATAGTGGTGGTAACGG 58.010 40.000 0.00 0.00 42.51 4.44
87 89 8.761497 CAAAGTAATATGATAGTGGTGGTAACG 58.239 37.037 0.00 0.00 42.51 3.18
88 90 8.557029 GCAAAGTAATATGATAGTGGTGGTAAC 58.443 37.037 0.00 0.00 0.00 2.50
89 91 8.491134 AGCAAAGTAATATGATAGTGGTGGTAA 58.509 33.333 0.00 0.00 0.00 2.85
90 92 8.029782 AGCAAAGTAATATGATAGTGGTGGTA 57.970 34.615 0.00 0.00 0.00 3.25
91 93 6.900194 AGCAAAGTAATATGATAGTGGTGGT 58.100 36.000 0.00 0.00 0.00 4.16
92 94 8.150945 AGTAGCAAAGTAATATGATAGTGGTGG 58.849 37.037 0.00 0.00 0.00 4.61
101 103 9.953565 AAGGTGTTTAGTAGCAAAGTAATATGA 57.046 29.630 0.00 0.00 0.00 2.15
102 104 9.988350 CAAGGTGTTTAGTAGCAAAGTAATATG 57.012 33.333 0.00 0.00 0.00 1.78
103 105 8.674607 GCAAGGTGTTTAGTAGCAAAGTAATAT 58.325 33.333 0.00 0.00 0.00 1.28
104 106 7.881232 AGCAAGGTGTTTAGTAGCAAAGTAATA 59.119 33.333 0.00 0.00 0.00 0.98
105 107 6.715264 AGCAAGGTGTTTAGTAGCAAAGTAAT 59.285 34.615 0.00 0.00 0.00 1.89
106 108 6.017440 CAGCAAGGTGTTTAGTAGCAAAGTAA 60.017 38.462 0.00 0.00 0.00 2.24
107 109 5.468746 CAGCAAGGTGTTTAGTAGCAAAGTA 59.531 40.000 0.00 0.00 0.00 2.24
108 110 4.275936 CAGCAAGGTGTTTAGTAGCAAAGT 59.724 41.667 0.00 0.00 0.00 2.66
109 111 4.787598 CAGCAAGGTGTTTAGTAGCAAAG 58.212 43.478 0.00 0.00 0.00 2.77
110 112 3.004315 GCAGCAAGGTGTTTAGTAGCAAA 59.996 43.478 0.94 0.00 0.00 3.68
111 113 2.552315 GCAGCAAGGTGTTTAGTAGCAA 59.448 45.455 0.94 0.00 0.00 3.91
112 114 2.151202 GCAGCAAGGTGTTTAGTAGCA 58.849 47.619 0.94 0.00 0.00 3.49
113 115 2.151202 TGCAGCAAGGTGTTTAGTAGC 58.849 47.619 0.00 0.00 0.00 3.58
114 116 3.664107 TCTGCAGCAAGGTGTTTAGTAG 58.336 45.455 9.47 0.00 0.00 2.57
115 117 3.762407 TCTGCAGCAAGGTGTTTAGTA 57.238 42.857 9.47 0.00 0.00 1.82
116 118 2.638480 TCTGCAGCAAGGTGTTTAGT 57.362 45.000 9.47 0.00 0.00 2.24
117 119 4.256920 AGTATCTGCAGCAAGGTGTTTAG 58.743 43.478 9.47 0.00 0.00 1.85
118 120 4.286297 AGTATCTGCAGCAAGGTGTTTA 57.714 40.909 9.47 0.00 0.00 2.01
119 121 3.146104 AGTATCTGCAGCAAGGTGTTT 57.854 42.857 9.47 0.00 0.00 2.83
120 122 2.867109 AGTATCTGCAGCAAGGTGTT 57.133 45.000 9.47 0.00 0.00 3.32
121 123 3.261897 ACTTAGTATCTGCAGCAAGGTGT 59.738 43.478 9.47 0.00 0.00 4.16
122 124 3.866651 ACTTAGTATCTGCAGCAAGGTG 58.133 45.455 9.47 0.00 0.00 4.00
123 125 4.559862 AACTTAGTATCTGCAGCAAGGT 57.440 40.909 9.47 2.86 0.00 3.50
124 126 4.333926 GGAAACTTAGTATCTGCAGCAAGG 59.666 45.833 9.47 0.00 0.00 3.61
125 127 4.937620 TGGAAACTTAGTATCTGCAGCAAG 59.062 41.667 9.47 9.20 0.00 4.01
126 128 4.905429 TGGAAACTTAGTATCTGCAGCAA 58.095 39.130 9.47 0.00 0.00 3.91
127 129 4.507710 CTGGAAACTTAGTATCTGCAGCA 58.492 43.478 9.47 0.00 0.00 4.41
128 130 3.873952 CCTGGAAACTTAGTATCTGCAGC 59.126 47.826 9.47 0.00 0.00 5.25
129 131 4.872691 CACCTGGAAACTTAGTATCTGCAG 59.127 45.833 7.63 7.63 0.00 4.41
130 132 4.286032 ACACCTGGAAACTTAGTATCTGCA 59.714 41.667 0.00 0.00 0.00 4.41
131 133 4.631813 CACACCTGGAAACTTAGTATCTGC 59.368 45.833 0.00 0.00 0.00 4.26
132 134 5.178797 CCACACCTGGAAACTTAGTATCTG 58.821 45.833 0.00 0.00 40.55 2.90
133 135 4.844655 ACCACACCTGGAAACTTAGTATCT 59.155 41.667 0.00 0.00 40.55 1.98
134 136 5.161943 ACCACACCTGGAAACTTAGTATC 57.838 43.478 0.00 0.00 40.55 2.24
135 137 5.072600 TCAACCACACCTGGAAACTTAGTAT 59.927 40.000 0.00 0.00 40.55 2.12
136 138 4.409574 TCAACCACACCTGGAAACTTAGTA 59.590 41.667 0.00 0.00 40.55 1.82
137 139 3.201266 TCAACCACACCTGGAAACTTAGT 59.799 43.478 0.00 0.00 40.55 2.24
138 140 3.815809 TCAACCACACCTGGAAACTTAG 58.184 45.455 0.00 0.00 40.55 2.18
139 141 3.935818 TCAACCACACCTGGAAACTTA 57.064 42.857 0.00 0.00 40.55 2.24
140 142 2.818751 TCAACCACACCTGGAAACTT 57.181 45.000 0.00 0.00 40.55 2.66
141 143 2.818751 TTCAACCACACCTGGAAACT 57.181 45.000 0.00 0.00 40.55 2.66
142 144 3.383185 TCAATTCAACCACACCTGGAAAC 59.617 43.478 0.00 0.00 40.55 2.78
143 145 3.383185 GTCAATTCAACCACACCTGGAAA 59.617 43.478 0.00 0.00 40.55 3.13
144 146 2.955660 GTCAATTCAACCACACCTGGAA 59.044 45.455 0.00 0.00 40.55 3.53
145 147 2.092158 TGTCAATTCAACCACACCTGGA 60.092 45.455 0.00 0.00 40.55 3.86
146 148 2.305928 TGTCAATTCAACCACACCTGG 58.694 47.619 0.00 0.00 44.26 4.45
147 149 3.381272 AGTTGTCAATTCAACCACACCTG 59.619 43.478 6.44 0.00 45.90 4.00
148 150 3.631250 AGTTGTCAATTCAACCACACCT 58.369 40.909 6.44 0.00 45.90 4.00
149 151 3.380004 TGAGTTGTCAATTCAACCACACC 59.620 43.478 8.22 0.00 45.90 4.16
150 152 4.601019 CTGAGTTGTCAATTCAACCACAC 58.399 43.478 11.44 0.00 45.90 3.82
151 153 3.066621 GCTGAGTTGTCAATTCAACCACA 59.933 43.478 11.44 6.79 45.90 4.17
152 154 3.316308 AGCTGAGTTGTCAATTCAACCAC 59.684 43.478 11.44 3.11 45.90 4.16
153 155 3.316029 CAGCTGAGTTGTCAATTCAACCA 59.684 43.478 8.42 4.56 45.90 3.67
154 156 3.854784 GCAGCTGAGTTGTCAATTCAACC 60.855 47.826 20.43 6.34 45.90 3.77
155 157 3.004106 AGCAGCTGAGTTGTCAATTCAAC 59.996 43.478 20.43 7.62 45.33 3.18
156 158 3.216800 AGCAGCTGAGTTGTCAATTCAA 58.783 40.909 20.43 0.00 30.14 2.69
157 159 2.854963 AGCAGCTGAGTTGTCAATTCA 58.145 42.857 20.43 10.07 30.14 2.57
158 160 5.557891 ATTAGCAGCTGAGTTGTCAATTC 57.442 39.130 20.43 1.25 30.14 2.17
159 161 6.176183 AGTATTAGCAGCTGAGTTGTCAATT 58.824 36.000 20.43 0.00 30.14 2.32
160 162 5.738909 AGTATTAGCAGCTGAGTTGTCAAT 58.261 37.500 20.43 7.37 30.14 2.57
161 163 5.152623 AGTATTAGCAGCTGAGTTGTCAA 57.847 39.130 20.43 0.00 30.14 3.18
162 164 4.808414 AGTATTAGCAGCTGAGTTGTCA 57.192 40.909 20.43 0.00 0.00 3.58
163 165 5.171476 TCAAGTATTAGCAGCTGAGTTGTC 58.829 41.667 20.43 0.00 0.00 3.18
164 166 5.047021 TCTCAAGTATTAGCAGCTGAGTTGT 60.047 40.000 20.43 0.85 0.00 3.32
165 167 5.414360 TCTCAAGTATTAGCAGCTGAGTTG 58.586 41.667 20.43 15.03 0.00 3.16
166 168 5.667539 TCTCAAGTATTAGCAGCTGAGTT 57.332 39.130 20.43 1.83 0.00 3.01
167 169 5.667539 TTCTCAAGTATTAGCAGCTGAGT 57.332 39.130 20.43 6.02 0.00 3.41
168 170 8.830201 AATATTCTCAAGTATTAGCAGCTGAG 57.170 34.615 20.43 1.96 0.00 3.35
169 171 8.646004 AGAATATTCTCAAGTATTAGCAGCTGA 58.354 33.333 20.43 0.00 29.94 4.26
170 172 8.830201 AGAATATTCTCAAGTATTAGCAGCTG 57.170 34.615 12.37 10.11 29.94 4.24
171 173 9.844257 AAAGAATATTCTCAAGTATTAGCAGCT 57.156 29.630 18.19 0.00 36.28 4.24
172 174 9.875675 CAAAGAATATTCTCAAGTATTAGCAGC 57.124 33.333 18.19 0.00 36.28 5.25
174 176 8.840321 GCCAAAGAATATTCTCAAGTATTAGCA 58.160 33.333 18.19 0.00 36.28 3.49
175 177 9.061435 AGCCAAAGAATATTCTCAAGTATTAGC 57.939 33.333 18.19 11.83 36.28 3.09
177 179 9.561069 GGAGCCAAAGAATATTCTCAAGTATTA 57.439 33.333 18.19 0.00 36.28 0.98
178 180 7.503902 GGGAGCCAAAGAATATTCTCAAGTATT 59.496 37.037 18.19 5.32 36.28 1.89
179 181 7.001073 GGGAGCCAAAGAATATTCTCAAGTAT 58.999 38.462 18.19 3.93 36.28 2.12
180 182 6.357367 GGGAGCCAAAGAATATTCTCAAGTA 58.643 40.000 18.19 0.00 36.28 2.24
181 183 5.196695 GGGAGCCAAAGAATATTCTCAAGT 58.803 41.667 18.19 0.00 36.28 3.16
182 184 4.582240 GGGGAGCCAAAGAATATTCTCAAG 59.418 45.833 18.19 10.54 36.28 3.02
183 185 4.230502 AGGGGAGCCAAAGAATATTCTCAA 59.769 41.667 18.19 0.00 36.28 3.02
184 186 3.788142 AGGGGAGCCAAAGAATATTCTCA 59.212 43.478 18.19 0.00 36.28 3.27
185 187 4.445557 AGGGGAGCCAAAGAATATTCTC 57.554 45.455 18.19 6.14 36.28 2.87
186 188 4.017130 ACAAGGGGAGCCAAAGAATATTCT 60.017 41.667 12.37 12.37 39.74 2.40
187 189 4.098501 CACAAGGGGAGCCAAAGAATATTC 59.901 45.833 7.41 7.41 0.00 1.75
188 190 4.026052 CACAAGGGGAGCCAAAGAATATT 58.974 43.478 0.00 0.00 0.00 1.28
189 191 3.011708 ACACAAGGGGAGCCAAAGAATAT 59.988 43.478 0.00 0.00 0.00 1.28
190 192 2.378547 ACACAAGGGGAGCCAAAGAATA 59.621 45.455 0.00 0.00 0.00 1.75
191 193 1.147817 ACACAAGGGGAGCCAAAGAAT 59.852 47.619 0.00 0.00 0.00 2.40
192 194 0.555769 ACACAAGGGGAGCCAAAGAA 59.444 50.000 0.00 0.00 0.00 2.52
193 195 0.110486 GACACAAGGGGAGCCAAAGA 59.890 55.000 0.00 0.00 0.00 2.52
194 196 1.237285 CGACACAAGGGGAGCCAAAG 61.237 60.000 0.00 0.00 0.00 2.77
195 197 1.228124 CGACACAAGGGGAGCCAAA 60.228 57.895 0.00 0.00 0.00 3.28
196 198 1.701031 TTCGACACAAGGGGAGCCAA 61.701 55.000 0.00 0.00 0.00 4.52
197 199 1.488705 ATTCGACACAAGGGGAGCCA 61.489 55.000 0.00 0.00 0.00 4.75
198 200 0.744771 GATTCGACACAAGGGGAGCC 60.745 60.000 0.00 0.00 0.00 4.70
199 201 0.036388 TGATTCGACACAAGGGGAGC 60.036 55.000 0.00 0.00 0.00 4.70
200 202 2.076863 GTTGATTCGACACAAGGGGAG 58.923 52.381 4.08 0.00 0.00 4.30
201 203 1.418264 TGTTGATTCGACACAAGGGGA 59.582 47.619 2.43 0.00 0.00 4.81
202 204 1.890876 TGTTGATTCGACACAAGGGG 58.109 50.000 2.43 0.00 0.00 4.79
203 205 3.980646 TTTGTTGATTCGACACAAGGG 57.019 42.857 6.22 0.00 0.00 3.95
204 206 5.115472 CGAAATTTGTTGATTCGACACAAGG 59.885 40.000 6.22 0.00 46.50 3.61
205 207 5.115472 CCGAAATTTGTTGATTCGACACAAG 59.885 40.000 6.22 0.00 46.50 3.16
206 208 4.973051 CCGAAATTTGTTGATTCGACACAA 59.027 37.500 6.22 5.45 46.50 3.33
207 209 4.035792 ACCGAAATTTGTTGATTCGACACA 59.964 37.500 6.22 0.72 46.50 3.72
208 210 4.533222 ACCGAAATTTGTTGATTCGACAC 58.467 39.130 6.22 0.00 46.50 3.67
209 211 4.822036 ACCGAAATTTGTTGATTCGACA 57.178 36.364 8.54 2.43 46.50 4.35
210 212 5.209240 TCAACCGAAATTTGTTGATTCGAC 58.791 37.500 16.15 0.00 46.50 4.20
211 213 5.425577 TCAACCGAAATTTGTTGATTCGA 57.574 34.783 16.15 0.00 46.50 3.71
216 218 7.504924 AGAGTATTCAACCGAAATTTGTTGA 57.495 32.000 16.15 16.15 46.60 3.18
217 219 7.749126 GGTAGAGTATTCAACCGAAATTTGTTG 59.251 37.037 12.82 12.82 42.46 3.33
218 220 7.094506 GGGTAGAGTATTCAACCGAAATTTGTT 60.095 37.037 0.00 0.00 34.01 2.83
219 221 6.373495 GGGTAGAGTATTCAACCGAAATTTGT 59.627 38.462 0.00 0.00 34.01 2.83
220 222 6.598064 AGGGTAGAGTATTCAACCGAAATTTG 59.402 38.462 0.00 0.00 34.01 2.32
221 223 6.718294 AGGGTAGAGTATTCAACCGAAATTT 58.282 36.000 0.00 0.00 34.01 1.82
222 224 6.309389 AGGGTAGAGTATTCAACCGAAATT 57.691 37.500 0.00 0.00 34.01 1.82
223 225 5.451520 CGAGGGTAGAGTATTCAACCGAAAT 60.452 44.000 0.00 0.00 34.01 2.17
224 226 4.142315 CGAGGGTAGAGTATTCAACCGAAA 60.142 45.833 0.00 0.00 34.01 3.46
225 227 3.379372 CGAGGGTAGAGTATTCAACCGAA 59.621 47.826 0.00 0.00 35.05 4.30
226 228 2.947652 CGAGGGTAGAGTATTCAACCGA 59.052 50.000 0.00 0.00 32.53 4.69
227 229 2.947652 TCGAGGGTAGAGTATTCAACCG 59.052 50.000 0.00 0.00 32.53 4.44
228 230 4.996788 TTCGAGGGTAGAGTATTCAACC 57.003 45.455 0.00 0.00 0.00 3.77
229 231 6.396450 AGTTTTCGAGGGTAGAGTATTCAAC 58.604 40.000 0.00 0.00 0.00 3.18
230 232 6.600882 AGTTTTCGAGGGTAGAGTATTCAA 57.399 37.500 0.00 0.00 0.00 2.69
231 233 7.893124 ATAGTTTTCGAGGGTAGAGTATTCA 57.107 36.000 0.00 0.00 0.00 2.57
232 234 7.169476 GCAATAGTTTTCGAGGGTAGAGTATTC 59.831 40.741 0.00 0.00 0.00 1.75
233 235 6.985059 GCAATAGTTTTCGAGGGTAGAGTATT 59.015 38.462 0.00 0.00 0.00 1.89
234 236 6.514063 GCAATAGTTTTCGAGGGTAGAGTAT 58.486 40.000 0.00 0.00 0.00 2.12
235 237 5.449588 CGCAATAGTTTTCGAGGGTAGAGTA 60.450 44.000 0.00 0.00 0.00 2.59
236 238 4.677250 CGCAATAGTTTTCGAGGGTAGAGT 60.677 45.833 0.00 0.00 0.00 3.24
237 239 3.797256 CGCAATAGTTTTCGAGGGTAGAG 59.203 47.826 0.00 0.00 0.00 2.43
238 240 3.444742 TCGCAATAGTTTTCGAGGGTAGA 59.555 43.478 0.00 0.00 0.00 2.59
239 241 3.777478 TCGCAATAGTTTTCGAGGGTAG 58.223 45.455 0.00 0.00 0.00 3.18
240 242 3.872511 TCGCAATAGTTTTCGAGGGTA 57.127 42.857 0.00 0.00 0.00 3.69
241 243 2.754946 TCGCAATAGTTTTCGAGGGT 57.245 45.000 0.00 0.00 0.00 4.34
242 244 2.544267 GGATCGCAATAGTTTTCGAGGG 59.456 50.000 0.00 0.00 34.30 4.30
243 245 2.544267 GGGATCGCAATAGTTTTCGAGG 59.456 50.000 4.64 0.00 34.30 4.63
244 246 2.544267 GGGGATCGCAATAGTTTTCGAG 59.456 50.000 12.32 0.00 34.30 4.04
245 247 2.169769 AGGGGATCGCAATAGTTTTCGA 59.830 45.455 12.32 0.00 35.34 3.71
246 248 2.561569 AGGGGATCGCAATAGTTTTCG 58.438 47.619 12.32 0.00 0.00 3.46
247 249 6.465084 AGTATAGGGGATCGCAATAGTTTTC 58.535 40.000 12.32 0.00 0.00 2.29
248 250 6.435292 AGTATAGGGGATCGCAATAGTTTT 57.565 37.500 12.32 0.00 0.00 2.43
249 251 6.183361 ACAAGTATAGGGGATCGCAATAGTTT 60.183 38.462 12.32 4.36 0.00 2.66
250 252 5.307196 ACAAGTATAGGGGATCGCAATAGTT 59.693 40.000 12.32 13.36 0.00 2.24
251 253 4.838986 ACAAGTATAGGGGATCGCAATAGT 59.161 41.667 12.32 8.60 0.00 2.12
252 254 5.171476 CACAAGTATAGGGGATCGCAATAG 58.829 45.833 12.32 1.12 0.00 1.73
253 255 4.020573 CCACAAGTATAGGGGATCGCAATA 60.021 45.833 12.32 6.10 0.00 1.90
254 256 3.244561 CCACAAGTATAGGGGATCGCAAT 60.245 47.826 12.32 7.05 0.00 3.56
255 257 2.104111 CCACAAGTATAGGGGATCGCAA 59.896 50.000 12.32 0.00 0.00 4.85
256 258 1.691976 CCACAAGTATAGGGGATCGCA 59.308 52.381 12.32 0.00 0.00 5.10
257 259 1.002087 CCCACAAGTATAGGGGATCGC 59.998 57.143 0.06 0.06 43.57 4.58
264 266 4.102524 TGCCTGATAACCCACAAGTATAGG 59.897 45.833 0.00 0.00 0.00 2.57
265 267 5.057149 GTGCCTGATAACCCACAAGTATAG 58.943 45.833 0.00 0.00 0.00 1.31
266 268 4.141574 GGTGCCTGATAACCCACAAGTATA 60.142 45.833 0.00 0.00 0.00 1.47
267 269 3.371595 GGTGCCTGATAACCCACAAGTAT 60.372 47.826 0.00 0.00 0.00 2.12
268 270 2.026636 GGTGCCTGATAACCCACAAGTA 60.027 50.000 0.00 0.00 0.00 2.24
269 271 1.271926 GGTGCCTGATAACCCACAAGT 60.272 52.381 0.00 0.00 0.00 3.16
270 272 1.271871 TGGTGCCTGATAACCCACAAG 60.272 52.381 0.00 0.00 35.44 3.16
271 273 0.774276 TGGTGCCTGATAACCCACAA 59.226 50.000 0.00 0.00 35.44 3.33
272 274 0.774276 TTGGTGCCTGATAACCCACA 59.226 50.000 0.00 0.00 35.44 4.17
273 275 2.143876 ATTGGTGCCTGATAACCCAC 57.856 50.000 0.00 0.00 35.44 4.61
274 276 2.849943 ACTATTGGTGCCTGATAACCCA 59.150 45.455 0.00 0.00 35.44 4.51
275 277 3.577805 ACTATTGGTGCCTGATAACCC 57.422 47.619 0.00 0.00 35.44 4.11
276 278 4.056050 CGTACTATTGGTGCCTGATAACC 58.944 47.826 0.00 0.00 36.96 2.85
277 279 4.690122 ACGTACTATTGGTGCCTGATAAC 58.310 43.478 0.00 0.00 0.00 1.89
278 280 6.468333 TTACGTACTATTGGTGCCTGATAA 57.532 37.500 0.00 0.00 0.00 1.75
279 281 6.468333 TTTACGTACTATTGGTGCCTGATA 57.532 37.500 0.00 0.00 0.00 2.15
280 282 5.347620 TTTACGTACTATTGGTGCCTGAT 57.652 39.130 0.00 0.00 0.00 2.90
281 283 4.804868 TTTACGTACTATTGGTGCCTGA 57.195 40.909 0.00 0.00 0.00 3.86
282 284 5.179742 TGTTTTTACGTACTATTGGTGCCTG 59.820 40.000 0.00 0.00 0.00 4.85
283 285 5.307204 TGTTTTTACGTACTATTGGTGCCT 58.693 37.500 0.00 0.00 0.00 4.75
284 286 5.179929 ACTGTTTTTACGTACTATTGGTGCC 59.820 40.000 0.00 0.00 0.00 5.01
285 287 6.146673 AGACTGTTTTTACGTACTATTGGTGC 59.853 38.462 0.00 0.00 0.00 5.01
286 288 7.647907 AGACTGTTTTTACGTACTATTGGTG 57.352 36.000 0.00 0.00 0.00 4.17
287 289 7.814587 GGTAGACTGTTTTTACGTACTATTGGT 59.185 37.037 0.00 0.00 0.00 3.67
288 290 7.814107 TGGTAGACTGTTTTTACGTACTATTGG 59.186 37.037 0.00 0.00 0.00 3.16
289 291 8.746922 TGGTAGACTGTTTTTACGTACTATTG 57.253 34.615 0.00 0.00 0.00 1.90
290 292 9.415544 CTTGGTAGACTGTTTTTACGTACTATT 57.584 33.333 0.00 0.00 0.00 1.73
291 293 8.796475 TCTTGGTAGACTGTTTTTACGTACTAT 58.204 33.333 0.00 0.00 0.00 2.12
292 294 8.165239 TCTTGGTAGACTGTTTTTACGTACTA 57.835 34.615 0.00 0.00 0.00 1.82
293 295 7.042797 TCTTGGTAGACTGTTTTTACGTACT 57.957 36.000 0.00 0.00 0.00 2.73
294 296 7.698836 TTCTTGGTAGACTGTTTTTACGTAC 57.301 36.000 0.00 0.00 0.00 3.67
295 297 9.979578 TTATTCTTGGTAGACTGTTTTTACGTA 57.020 29.630 0.00 0.00 0.00 3.57
296 298 8.891671 TTATTCTTGGTAGACTGTTTTTACGT 57.108 30.769 0.00 0.00 0.00 3.57
304 306 9.823647 CATGTCTAATTATTCTTGGTAGACTGT 57.176 33.333 9.75 0.00 40.76 3.55
307 309 8.969267 CGTCATGTCTAATTATTCTTGGTAGAC 58.031 37.037 0.00 0.00 40.61 2.59
308 310 8.141909 CCGTCATGTCTAATTATTCTTGGTAGA 58.858 37.037 0.00 0.00 0.00 2.59
309 311 8.141909 TCCGTCATGTCTAATTATTCTTGGTAG 58.858 37.037 0.00 0.00 0.00 3.18
310 312 8.014070 TCCGTCATGTCTAATTATTCTTGGTA 57.986 34.615 0.00 0.00 0.00 3.25
311 313 6.884832 TCCGTCATGTCTAATTATTCTTGGT 58.115 36.000 0.00 0.00 0.00 3.67
312 314 7.969536 ATCCGTCATGTCTAATTATTCTTGG 57.030 36.000 0.00 0.00 0.00 3.61
313 315 7.800380 GCAATCCGTCATGTCTAATTATTCTTG 59.200 37.037 0.00 0.00 0.00 3.02
314 316 7.498900 TGCAATCCGTCATGTCTAATTATTCTT 59.501 33.333 0.00 0.00 0.00 2.52
315 317 6.992123 TGCAATCCGTCATGTCTAATTATTCT 59.008 34.615 0.00 0.00 0.00 2.40
316 318 7.189693 TGCAATCCGTCATGTCTAATTATTC 57.810 36.000 0.00 0.00 0.00 1.75
317 319 7.566760 TTGCAATCCGTCATGTCTAATTATT 57.433 32.000 0.00 0.00 0.00 1.40
318 320 7.445096 TGATTGCAATCCGTCATGTCTAATTAT 59.555 33.333 31.35 0.00 34.50 1.28
319 321 6.765512 TGATTGCAATCCGTCATGTCTAATTA 59.234 34.615 31.35 8.62 34.50 1.40
320 322 5.589855 TGATTGCAATCCGTCATGTCTAATT 59.410 36.000 31.35 0.00 34.50 1.40
321 323 5.125356 TGATTGCAATCCGTCATGTCTAAT 58.875 37.500 31.35 0.00 34.50 1.73
322 324 4.512484 TGATTGCAATCCGTCATGTCTAA 58.488 39.130 31.35 9.82 34.50 2.10
323 325 4.135747 TGATTGCAATCCGTCATGTCTA 57.864 40.909 31.35 10.30 34.50 2.59
324 326 2.989909 TGATTGCAATCCGTCATGTCT 58.010 42.857 31.35 0.00 34.50 3.41
325 327 3.763097 TTGATTGCAATCCGTCATGTC 57.237 42.857 31.35 10.09 34.50 3.06
326 328 4.261322 GCTATTGATTGCAATCCGTCATGT 60.261 41.667 31.35 14.44 43.43 3.21
327 329 4.224433 GCTATTGATTGCAATCCGTCATG 58.776 43.478 31.35 18.80 43.43 3.07
328 330 3.884693 TGCTATTGATTGCAATCCGTCAT 59.115 39.130 31.35 20.81 43.43 3.06
329 331 3.277715 TGCTATTGATTGCAATCCGTCA 58.722 40.909 31.35 19.93 43.43 4.35
330 332 3.969117 TGCTATTGATTGCAATCCGTC 57.031 42.857 31.35 18.00 43.43 4.79
331 333 3.947196 TCTTGCTATTGATTGCAATCCGT 59.053 39.130 31.35 22.78 44.79 4.69
332 334 4.556942 TCTTGCTATTGATTGCAATCCG 57.443 40.909 31.35 19.44 44.79 4.18
333 335 5.653507 TGTTCTTGCTATTGATTGCAATCC 58.346 37.500 31.35 18.44 44.79 3.01
334 336 7.490079 TCATTGTTCTTGCTATTGATTGCAATC 59.510 33.333 28.83 28.83 44.79 2.67
335 337 7.324935 TCATTGTTCTTGCTATTGATTGCAAT 58.675 30.769 12.83 12.83 44.79 3.56
336 338 6.689554 TCATTGTTCTTGCTATTGATTGCAA 58.310 32.000 0.00 0.00 43.99 4.08
337 339 6.270156 TCATTGTTCTTGCTATTGATTGCA 57.730 33.333 0.00 0.00 36.78 4.08
338 340 7.585286 TTTCATTGTTCTTGCTATTGATTGC 57.415 32.000 0.00 0.00 0.00 3.56
339 341 9.582431 AGATTTCATTGTTCTTGCTATTGATTG 57.418 29.630 0.00 0.00 0.00 2.67
343 345 9.459640 CCATAGATTTCATTGTTCTTGCTATTG 57.540 33.333 0.00 0.00 0.00 1.90
344 346 8.636213 CCCATAGATTTCATTGTTCTTGCTATT 58.364 33.333 0.00 0.00 0.00 1.73
345 347 7.255730 GCCCATAGATTTCATTGTTCTTGCTAT 60.256 37.037 0.00 0.00 0.00 2.97
346 348 6.039717 GCCCATAGATTTCATTGTTCTTGCTA 59.960 38.462 0.00 0.00 0.00 3.49
347 349 5.163478 GCCCATAGATTTCATTGTTCTTGCT 60.163 40.000 0.00 0.00 0.00 3.91
348 350 5.045872 GCCCATAGATTTCATTGTTCTTGC 58.954 41.667 0.00 0.00 0.00 4.01
349 351 6.211587 TGCCCATAGATTTCATTGTTCTTG 57.788 37.500 0.00 0.00 0.00 3.02
350 352 6.855763 TTGCCCATAGATTTCATTGTTCTT 57.144 33.333 0.00 0.00 0.00 2.52
351 353 6.855763 TTTGCCCATAGATTTCATTGTTCT 57.144 33.333 0.00 0.00 0.00 3.01
352 354 9.768662 ATTATTTGCCCATAGATTTCATTGTTC 57.231 29.630 0.00 0.00 0.00 3.18
354 356 9.768662 GAATTATTTGCCCATAGATTTCATTGT 57.231 29.630 0.00 0.00 0.00 2.71
355 357 9.211485 GGAATTATTTGCCCATAGATTTCATTG 57.789 33.333 0.00 0.00 0.00 2.82
356 358 9.162733 AGGAATTATTTGCCCATAGATTTCATT 57.837 29.630 0.00 0.00 0.00 2.57
357 359 8.731591 AGGAATTATTTGCCCATAGATTTCAT 57.268 30.769 0.00 0.00 0.00 2.57
358 360 9.827198 ATAGGAATTATTTGCCCATAGATTTCA 57.173 29.630 0.00 0.00 0.00 2.69
378 380 9.241919 TGATGTTCTTATTCTTGCAAATAGGAA 57.758 29.630 10.17 10.17 35.84 3.36
379 381 8.806429 TGATGTTCTTATTCTTGCAAATAGGA 57.194 30.769 0.00 0.00 0.00 2.94
395 397 9.359653 CCTATGGGAAGAATTAATGATGTTCTT 57.640 33.333 1.54 1.54 42.94 2.52
396 398 8.506083 ACCTATGGGAAGAATTAATGATGTTCT 58.494 33.333 0.25 0.00 36.25 3.01
397 399 8.697507 ACCTATGGGAAGAATTAATGATGTTC 57.302 34.615 0.25 0.00 36.25 3.18
398 400 9.492730 AAACCTATGGGAAGAATTAATGATGTT 57.507 29.630 0.25 0.00 36.25 2.71
399 401 9.492730 AAAACCTATGGGAAGAATTAATGATGT 57.507 29.630 0.25 0.00 36.25 3.06
423 425 8.736244 GCACTTGGTGGATTCTACTATTAAAAA 58.264 33.333 0.00 0.00 33.64 1.94
424 426 7.885922 TGCACTTGGTGGATTCTACTATTAAAA 59.114 33.333 0.00 0.00 33.64 1.52
425 427 7.398829 TGCACTTGGTGGATTCTACTATTAAA 58.601 34.615 0.00 0.00 33.64 1.52
426 428 6.953101 TGCACTTGGTGGATTCTACTATTAA 58.047 36.000 0.00 0.00 33.64 1.40
427 429 6.553953 TGCACTTGGTGGATTCTACTATTA 57.446 37.500 0.00 0.00 33.64 0.98
428 430 5.435686 TGCACTTGGTGGATTCTACTATT 57.564 39.130 0.00 0.00 33.64 1.73
429 431 5.435686 TTGCACTTGGTGGATTCTACTAT 57.564 39.130 0.00 0.00 33.22 2.12
430 432 4.901197 TTGCACTTGGTGGATTCTACTA 57.099 40.909 0.00 0.00 33.22 1.82
431 433 3.788227 TTGCACTTGGTGGATTCTACT 57.212 42.857 0.00 0.00 33.22 2.57
432 434 5.391312 AATTTGCACTTGGTGGATTCTAC 57.609 39.130 0.00 0.00 33.22 2.59
433 435 7.531857 TTAAATTTGCACTTGGTGGATTCTA 57.468 32.000 0.00 0.00 33.22 2.10
434 436 4.961438 AAATTTGCACTTGGTGGATTCT 57.039 36.364 0.00 0.00 33.22 2.40
435 437 6.928492 TCTTTAAATTTGCACTTGGTGGATTC 59.072 34.615 0.00 0.00 33.22 2.52
436 438 6.825610 TCTTTAAATTTGCACTTGGTGGATT 58.174 32.000 0.00 0.00 33.22 3.01
437 439 6.267471 TCTCTTTAAATTTGCACTTGGTGGAT 59.733 34.615 0.00 0.00 33.22 3.41
438 440 5.596361 TCTCTTTAAATTTGCACTTGGTGGA 59.404 36.000 0.00 0.00 33.64 4.02
439 441 5.841810 TCTCTTTAAATTTGCACTTGGTGG 58.158 37.500 0.00 0.00 33.64 4.61
440 442 7.951530 ATTCTCTTTAAATTTGCACTTGGTG 57.048 32.000 0.00 0.00 36.51 4.17
441 443 8.424133 AGAATTCTCTTTAAATTTGCACTTGGT 58.576 29.630 0.88 0.00 0.00 3.67
442 444 8.822652 AGAATTCTCTTTAAATTTGCACTTGG 57.177 30.769 0.88 0.00 0.00 3.61
459 461 7.926555 TGGTCTTACCGATATTGAAGAATTCTC 59.073 37.037 8.78 3.35 43.64 2.87
460 462 7.792032 TGGTCTTACCGATATTGAAGAATTCT 58.208 34.615 0.88 0.88 43.64 2.40
461 463 8.433421 TTGGTCTTACCGATATTGAAGAATTC 57.567 34.615 0.00 0.00 43.58 2.17
462 464 8.047310 ACTTGGTCTTACCGATATTGAAGAATT 58.953 33.333 0.00 0.00 42.58 2.17
463 465 7.565680 ACTTGGTCTTACCGATATTGAAGAAT 58.434 34.615 0.00 0.00 42.58 2.40
464 466 6.942976 ACTTGGTCTTACCGATATTGAAGAA 58.057 36.000 0.00 0.00 42.58 2.52
465 467 6.540438 ACTTGGTCTTACCGATATTGAAGA 57.460 37.500 0.00 0.00 42.58 2.87
466 468 7.262772 TGTACTTGGTCTTACCGATATTGAAG 58.737 38.462 0.00 0.00 42.58 3.02
467 469 7.172868 TGTACTTGGTCTTACCGATATTGAA 57.827 36.000 0.00 0.00 42.58 2.69
468 470 6.778834 TGTACTTGGTCTTACCGATATTGA 57.221 37.500 0.00 0.00 42.58 2.57
469 471 7.169308 GTGATGTACTTGGTCTTACCGATATTG 59.831 40.741 0.00 0.00 42.58 1.90
470 472 7.147794 TGTGATGTACTTGGTCTTACCGATATT 60.148 37.037 0.00 0.00 42.58 1.28
471 473 6.322969 TGTGATGTACTTGGTCTTACCGATAT 59.677 38.462 0.00 0.00 42.58 1.63
472 474 5.653330 TGTGATGTACTTGGTCTTACCGATA 59.347 40.000 0.00 0.00 42.58 2.92
473 475 4.464951 TGTGATGTACTTGGTCTTACCGAT 59.535 41.667 0.00 0.00 42.58 4.18
474 476 3.827876 TGTGATGTACTTGGTCTTACCGA 59.172 43.478 0.00 0.00 42.58 4.69
475 477 4.182693 TGTGATGTACTTGGTCTTACCG 57.817 45.455 0.00 0.00 42.58 4.02
476 478 8.038944 TCTTTATGTGATGTACTTGGTCTTACC 58.961 37.037 0.00 0.00 39.22 2.85
477 479 8.997621 TCTTTATGTGATGTACTTGGTCTTAC 57.002 34.615 0.00 0.00 0.00 2.34
479 481 9.167311 GAATCTTTATGTGATGTACTTGGTCTT 57.833 33.333 0.00 0.00 0.00 3.01
480 482 8.543774 AGAATCTTTATGTGATGTACTTGGTCT 58.456 33.333 0.00 0.00 0.00 3.85
481 483 8.607459 CAGAATCTTTATGTGATGTACTTGGTC 58.393 37.037 0.00 0.00 0.00 4.02
482 484 7.554118 CCAGAATCTTTATGTGATGTACTTGGT 59.446 37.037 0.00 0.00 0.00 3.67
483 485 7.770433 TCCAGAATCTTTATGTGATGTACTTGG 59.230 37.037 0.00 0.00 0.00 3.61
484 486 8.722480 TCCAGAATCTTTATGTGATGTACTTG 57.278 34.615 0.00 0.00 0.00 3.16
485 487 9.911788 ATTCCAGAATCTTTATGTGATGTACTT 57.088 29.630 0.00 0.00 0.00 2.24
486 488 9.911788 AATTCCAGAATCTTTATGTGATGTACT 57.088 29.630 0.00 0.00 0.00 2.73
487 489 9.941664 CAATTCCAGAATCTTTATGTGATGTAC 57.058 33.333 0.00 0.00 0.00 2.90
488 490 9.904198 TCAATTCCAGAATCTTTATGTGATGTA 57.096 29.630 0.00 0.00 0.00 2.29
489 491 8.812513 TCAATTCCAGAATCTTTATGTGATGT 57.187 30.769 0.00 0.00 0.00 3.06
490 492 9.731819 CTTCAATTCCAGAATCTTTATGTGATG 57.268 33.333 0.00 0.00 0.00 3.07
491 493 9.690913 TCTTCAATTCCAGAATCTTTATGTGAT 57.309 29.630 0.00 0.00 0.00 3.06
492 494 9.519191 TTCTTCAATTCCAGAATCTTTATGTGA 57.481 29.630 0.00 0.00 0.00 3.58
497 499 9.354673 AGTGTTTCTTCAATTCCAGAATCTTTA 57.645 29.630 0.00 0.00 0.00 1.85
498 500 8.242729 AGTGTTTCTTCAATTCCAGAATCTTT 57.757 30.769 0.00 0.00 0.00 2.52
499 501 7.830099 AGTGTTTCTTCAATTCCAGAATCTT 57.170 32.000 0.00 0.00 0.00 2.40
500 502 8.378565 TCTAGTGTTTCTTCAATTCCAGAATCT 58.621 33.333 0.00 0.00 0.00 2.40
501 503 8.553459 TCTAGTGTTTCTTCAATTCCAGAATC 57.447 34.615 0.00 0.00 0.00 2.52
502 504 8.787852 GTTCTAGTGTTTCTTCAATTCCAGAAT 58.212 33.333 0.00 0.00 0.00 2.40
503 505 7.228706 GGTTCTAGTGTTTCTTCAATTCCAGAA 59.771 37.037 0.00 0.00 0.00 3.02
504 506 6.710744 GGTTCTAGTGTTTCTTCAATTCCAGA 59.289 38.462 0.00 0.00 0.00 3.86
505 507 6.072452 GGGTTCTAGTGTTTCTTCAATTCCAG 60.072 42.308 0.00 0.00 0.00 3.86
506 508 5.768164 GGGTTCTAGTGTTTCTTCAATTCCA 59.232 40.000 0.00 0.00 0.00 3.53
507 509 5.768164 TGGGTTCTAGTGTTTCTTCAATTCC 59.232 40.000 0.00 0.00 0.00 3.01
508 510 6.877611 TGGGTTCTAGTGTTTCTTCAATTC 57.122 37.500 0.00 0.00 0.00 2.17
509 511 6.833933 ACTTGGGTTCTAGTGTTTCTTCAATT 59.166 34.615 0.00 0.00 0.00 2.32
510 512 6.365520 ACTTGGGTTCTAGTGTTTCTTCAAT 58.634 36.000 0.00 0.00 0.00 2.57
511 513 5.751586 ACTTGGGTTCTAGTGTTTCTTCAA 58.248 37.500 0.00 0.00 0.00 2.69
512 514 5.104693 TGACTTGGGTTCTAGTGTTTCTTCA 60.105 40.000 0.00 0.00 0.00 3.02
513 515 5.236695 GTGACTTGGGTTCTAGTGTTTCTTC 59.763 44.000 0.00 0.00 0.00 2.87
514 516 5.123936 GTGACTTGGGTTCTAGTGTTTCTT 58.876 41.667 0.00 0.00 0.00 2.52
515 517 4.163458 TGTGACTTGGGTTCTAGTGTTTCT 59.837 41.667 0.00 0.00 0.00 2.52
516 518 4.448210 TGTGACTTGGGTTCTAGTGTTTC 58.552 43.478 0.00 0.00 0.00 2.78
517 519 4.497291 TGTGACTTGGGTTCTAGTGTTT 57.503 40.909 0.00 0.00 0.00 2.83
518 520 4.497291 TTGTGACTTGGGTTCTAGTGTT 57.503 40.909 0.00 0.00 0.00 3.32
519 521 4.497291 TTTGTGACTTGGGTTCTAGTGT 57.503 40.909 0.00 0.00 0.00 3.55
520 522 5.733373 GCTTTTTGTGACTTGGGTTCTAGTG 60.733 44.000 0.00 0.00 0.00 2.74
521 523 4.338400 GCTTTTTGTGACTTGGGTTCTAGT 59.662 41.667 0.00 0.00 0.00 2.57
522 524 4.338118 TGCTTTTTGTGACTTGGGTTCTAG 59.662 41.667 0.00 0.00 0.00 2.43
523 525 4.274147 TGCTTTTTGTGACTTGGGTTCTA 58.726 39.130 0.00 0.00 0.00 2.10
524 526 3.096092 TGCTTTTTGTGACTTGGGTTCT 58.904 40.909 0.00 0.00 0.00 3.01
525 527 3.518634 TGCTTTTTGTGACTTGGGTTC 57.481 42.857 0.00 0.00 0.00 3.62
526 528 3.971245 TTGCTTTTTGTGACTTGGGTT 57.029 38.095 0.00 0.00 0.00 4.11
527 529 3.971245 TTTGCTTTTTGTGACTTGGGT 57.029 38.095 0.00 0.00 0.00 4.51
528 530 3.999663 TGTTTTGCTTTTTGTGACTTGGG 59.000 39.130 0.00 0.00 0.00 4.12
529 531 4.690280 AGTGTTTTGCTTTTTGTGACTTGG 59.310 37.500 0.00 0.00 0.00 3.61
530 532 5.404968 TGAGTGTTTTGCTTTTTGTGACTTG 59.595 36.000 0.00 0.00 0.00 3.16
531 533 5.537188 TGAGTGTTTTGCTTTTTGTGACTT 58.463 33.333 0.00 0.00 0.00 3.01
532 534 5.132897 TGAGTGTTTTGCTTTTTGTGACT 57.867 34.783 0.00 0.00 0.00 3.41
533 535 7.518731 TTATGAGTGTTTTGCTTTTTGTGAC 57.481 32.000 0.00 0.00 0.00 3.67
534 536 8.715191 AATTATGAGTGTTTTGCTTTTTGTGA 57.285 26.923 0.00 0.00 0.00 3.58
535 537 9.771915 AAAATTATGAGTGTTTTGCTTTTTGTG 57.228 25.926 0.00 0.00 0.00 3.33
540 542 9.271828 CCCTAAAAATTATGAGTGTTTTGCTTT 57.728 29.630 0.00 0.00 0.00 3.51
541 543 8.428852 ACCCTAAAAATTATGAGTGTTTTGCTT 58.571 29.630 0.00 0.00 0.00 3.91
542 544 7.962441 ACCCTAAAAATTATGAGTGTTTTGCT 58.038 30.769 0.00 0.00 0.00 3.91
543 545 8.601845 AACCCTAAAAATTATGAGTGTTTTGC 57.398 30.769 0.00 0.00 0.00 3.68
557 559 9.899661 GGCAAAAGGATAATTAACCCTAAAAAT 57.100 29.630 8.09 0.00 0.00 1.82
558 560 8.322828 GGGCAAAAGGATAATTAACCCTAAAAA 58.677 33.333 8.09 0.00 31.84 1.94
559 561 7.458170 TGGGCAAAAGGATAATTAACCCTAAAA 59.542 33.333 8.09 0.00 35.76 1.52
560 562 6.960542 TGGGCAAAAGGATAATTAACCCTAAA 59.039 34.615 8.09 0.00 35.76 1.85
585 587 2.433604 CTGAGCAGATGGACACCACTAT 59.566 50.000 0.00 0.00 35.80 2.12
659 661 3.194861 CCAAAGTTCACAGAACGAGTCA 58.805 45.455 4.43 0.00 0.00 3.41
874 876 0.809385 CTCTCTCTCGCCGTGGTTAA 59.191 55.000 0.00 0.00 0.00 2.01
885 887 2.159099 TCGTGCTCTCTCTCTCTCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
886 888 1.831106 TCGTGCTCTCTCTCTCTCTCT 59.169 52.381 0.00 0.00 0.00 3.10
887 889 1.933853 GTCGTGCTCTCTCTCTCTCTC 59.066 57.143 0.00 0.00 0.00 3.20
888 890 1.277842 TGTCGTGCTCTCTCTCTCTCT 59.722 52.381 0.00 0.00 0.00 3.10
896 898 2.986413 ACCGCTGTCGTGCTCTCT 60.986 61.111 0.00 0.00 0.00 3.10
908 910 2.685380 AGCTAGCTTCCCACCGCT 60.685 61.111 12.68 0.00 40.15 5.52
939 941 1.078143 CACAGCTAGCTTCCCACCC 60.078 63.158 16.46 0.00 0.00 4.61
1046 1048 1.683917 GGATAGACATCTCCACACGCT 59.316 52.381 0.00 0.00 0.00 5.07
1060 1062 2.091830 ACCATGGACAGACGAGGATAGA 60.092 50.000 21.47 0.00 0.00 1.98
1063 1065 0.826715 CACCATGGACAGACGAGGAT 59.173 55.000 21.47 0.00 0.00 3.24
1066 1068 1.448540 GGCACCATGGACAGACGAG 60.449 63.158 21.47 0.00 0.00 4.18
1113 1115 2.159226 ACGATTCTGGTTCCTCGATGTC 60.159 50.000 0.00 0.00 35.24 3.06
1413 1445 9.331282 CTAACCTTCTTATTCAACATCCTAAGG 57.669 37.037 0.00 0.00 37.55 2.69
1428 1512 6.681729 TCTTCAAGCTTCCTAACCTTCTTA 57.318 37.500 0.00 0.00 0.00 2.10
1497 1715 3.179443 ACCAGTGCGATTACCATACTG 57.821 47.619 0.00 0.00 38.70 2.74
1498 1716 3.055385 ACAACCAGTGCGATTACCATACT 60.055 43.478 0.00 0.00 0.00 2.12
2152 2379 4.646572 AGTGCAAAACAAAGGAAAACCAA 58.353 34.783 0.00 0.00 0.00 3.67
2175 2402 3.390967 ACCTTCCAACCCTCCAAAATTTG 59.609 43.478 0.00 0.00 0.00 2.32
2293 2520 9.590451 CATGAACTAACATGCAAATTTATTCCT 57.410 29.630 0.00 0.00 40.54 3.36
2510 2749 2.060326 TTCGTCATGAGTCCGTGAAC 57.940 50.000 0.00 0.00 39.78 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.