Multiple sequence alignment - TraesCS4B01G080600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G080600 chr4B 100.000 2174 0 0 1 2174 78488746 78486573 0.000000e+00 4015.0
1 TraesCS4B01G080600 chr4A 93.844 731 33 5 1452 2174 543608435 543609161 0.000000e+00 1090.0
2 TraesCS4B01G080600 chr4A 94.298 228 8 3 1234 1460 543607988 543608211 5.750000e-91 344.0
3 TraesCS4B01G080600 chr4D 95.735 633 21 4 1545 2173 53496177 53495547 0.000000e+00 1014.0
4 TraesCS4B01G080600 chr4D 91.519 283 12 5 1232 1505 53496896 53496617 1.580000e-101 379.0
5 TraesCS4B01G080600 chr4D 91.935 248 19 1 3 250 53499927 53499681 1.600000e-91 346.0
6 TraesCS4B01G080600 chr1D 93.583 374 24 0 798 1171 254417022 254417395 1.880000e-155 558.0
7 TraesCS4B01G080600 chr1A 93.583 374 24 0 798 1171 554456162 554456535 1.880000e-155 558.0
8 TraesCS4B01G080600 chr1A 93.583 374 24 0 798 1171 554458424 554458797 1.880000e-155 558.0
9 TraesCS4B01G080600 chr3B 93.316 374 25 0 798 1171 101919088 101918715 8.770000e-154 553.0
10 TraesCS4B01G080600 chr6D 93.067 375 25 1 798 1171 45511614 45511240 4.080000e-152 547.0
11 TraesCS4B01G080600 chr5D 93.048 374 26 0 798 1171 6180989 6180616 4.080000e-152 547.0
12 TraesCS4B01G080600 chr5D 92.781 374 27 0 798 1171 503287256 503287629 1.900000e-150 542.0
13 TraesCS4B01G080600 chr2D 93.048 374 26 0 798 1171 9785100 9785473 4.080000e-152 547.0
14 TraesCS4B01G080600 chr2B 92.819 376 26 1 798 1173 474900299 474900673 5.280000e-151 544.0
15 TraesCS4B01G080600 chr3A 75.862 174 33 7 533 699 560467053 560466882 1.790000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G080600 chr4B 78486573 78488746 2173 True 4015.000000 4015 100.000 1 2174 1 chr4B.!!$R1 2173
1 TraesCS4B01G080600 chr4A 543607988 543609161 1173 False 717.000000 1090 94.071 1234 2174 2 chr4A.!!$F1 940
2 TraesCS4B01G080600 chr4D 53495547 53499927 4380 True 579.666667 1014 93.063 3 2173 3 chr4D.!!$R1 2170
3 TraesCS4B01G080600 chr1A 554456162 554458797 2635 False 558.000000 558 93.583 798 1171 2 chr1A.!!$F1 373

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
778 779 0.035725 CCCCGGGGTTTCAGTTCTAC 60.036 60.0 33.25 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2105 6561 1.004785 CCGATTGTGCACGTACGTCA 61.005 55.0 19.94 16.28 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.223525 CCGACGATCTCTTTACACTCCC 60.224 54.545 0.00 0.00 0.00 4.30
25 26 4.822026 ACGATCTCTTTACACTCCCTTTG 58.178 43.478 0.00 0.00 0.00 2.77
69 70 6.598064 ACTCAAACCACTTAGAAATAATCCCG 59.402 38.462 0.00 0.00 0.00 5.14
70 71 6.478129 TCAAACCACTTAGAAATAATCCCGT 58.522 36.000 0.00 0.00 0.00 5.28
71 72 6.373216 TCAAACCACTTAGAAATAATCCCGTG 59.627 38.462 0.00 0.00 0.00 4.94
72 73 4.196971 ACCACTTAGAAATAATCCCGTGC 58.803 43.478 0.00 0.00 0.00 5.34
73 74 3.564225 CCACTTAGAAATAATCCCGTGCC 59.436 47.826 0.00 0.00 0.00 5.01
128 129 1.663379 GGCCGTGGCACTTTAATCCC 61.663 60.000 16.72 1.61 44.11 3.85
212 213 3.071495 GTGTGACGCAATCAAACGG 57.929 52.632 0.00 0.00 39.72 4.44
216 217 1.131826 GACGCAATCAAACGGACGG 59.868 57.895 0.00 0.00 0.00 4.79
243 244 5.769662 TCCCATAGGATTTGAATGTGTATGC 59.230 40.000 0.00 0.00 37.19 3.14
244 245 5.047802 CCCATAGGATTTGAATGTGTATGCC 60.048 44.000 0.00 0.00 33.47 4.40
250 251 8.076910 AGGATTTGAATGTGTATGCCATTTAA 57.923 30.769 0.00 0.00 32.84 1.52
252 253 9.328845 GGATTTGAATGTGTATGCCATTTAATT 57.671 29.630 0.00 0.00 32.84 1.40
255 256 8.715191 TTGAATGTGTATGCCATTTAATTTCC 57.285 30.769 0.00 0.00 32.84 3.13
256 257 6.977502 TGAATGTGTATGCCATTTAATTTCCG 59.022 34.615 0.00 0.00 32.84 4.30
257 258 5.906113 TGTGTATGCCATTTAATTTCCGT 57.094 34.783 0.00 0.00 0.00 4.69
258 259 7.575414 ATGTGTATGCCATTTAATTTCCGTA 57.425 32.000 0.00 0.00 0.00 4.02
259 260 7.022055 TGTGTATGCCATTTAATTTCCGTAG 57.978 36.000 0.00 0.00 0.00 3.51
260 261 5.912955 GTGTATGCCATTTAATTTCCGTAGC 59.087 40.000 0.00 0.00 0.00 3.58
261 262 5.590663 TGTATGCCATTTAATTTCCGTAGCA 59.409 36.000 0.00 0.00 0.00 3.49
262 263 5.590530 ATGCCATTTAATTTCCGTAGCAA 57.409 34.783 0.00 0.00 0.00 3.91
263 264 4.992688 TGCCATTTAATTTCCGTAGCAAG 58.007 39.130 0.00 0.00 0.00 4.01
264 265 3.796717 GCCATTTAATTTCCGTAGCAAGC 59.203 43.478 0.00 0.00 0.00 4.01
265 266 4.359706 CCATTTAATTTCCGTAGCAAGCC 58.640 43.478 0.00 0.00 0.00 4.35
266 267 4.097892 CCATTTAATTTCCGTAGCAAGCCT 59.902 41.667 0.00 0.00 0.00 4.58
267 268 5.298276 CCATTTAATTTCCGTAGCAAGCCTA 59.702 40.000 0.00 0.00 0.00 3.93
268 269 6.016276 CCATTTAATTTCCGTAGCAAGCCTAT 60.016 38.462 0.00 0.00 0.00 2.57
269 270 7.425606 CATTTAATTTCCGTAGCAAGCCTATT 58.574 34.615 0.00 0.00 0.00 1.73
270 271 7.399245 TTTAATTTCCGTAGCAAGCCTATTT 57.601 32.000 0.00 0.00 0.00 1.40
271 272 5.914898 AATTTCCGTAGCAAGCCTATTTT 57.085 34.783 0.00 0.00 0.00 1.82
272 273 5.914898 ATTTCCGTAGCAAGCCTATTTTT 57.085 34.783 0.00 0.00 0.00 1.94
273 274 4.695217 TTCCGTAGCAAGCCTATTTTTG 57.305 40.909 0.00 0.00 0.00 2.44
278 279 2.083167 GCAAGCCTATTTTTGCAGCA 57.917 45.000 0.00 0.00 46.72 4.41
279 280 1.728425 GCAAGCCTATTTTTGCAGCAC 59.272 47.619 0.00 0.00 46.72 4.40
280 281 2.611224 GCAAGCCTATTTTTGCAGCACT 60.611 45.455 0.00 0.00 46.72 4.40
281 282 3.367292 GCAAGCCTATTTTTGCAGCACTA 60.367 43.478 0.00 0.00 46.72 2.74
282 283 4.808558 CAAGCCTATTTTTGCAGCACTAA 58.191 39.130 0.00 0.00 0.00 2.24
283 284 5.229423 CAAGCCTATTTTTGCAGCACTAAA 58.771 37.500 0.00 0.00 0.00 1.85
284 285 5.665916 AGCCTATTTTTGCAGCACTAAAT 57.334 34.783 15.50 15.50 0.00 1.40
285 286 6.773976 AGCCTATTTTTGCAGCACTAAATA 57.226 33.333 15.92 15.92 0.00 1.40
286 287 7.352079 AGCCTATTTTTGCAGCACTAAATAT 57.648 32.000 16.66 5.01 0.00 1.28
287 288 7.205297 AGCCTATTTTTGCAGCACTAAATATG 58.795 34.615 16.66 15.34 0.00 1.78
288 289 6.980397 GCCTATTTTTGCAGCACTAAATATGT 59.020 34.615 16.66 2.18 0.00 2.29
289 290 8.134895 GCCTATTTTTGCAGCACTAAATATGTA 58.865 33.333 16.66 3.69 0.00 2.29
290 291 9.450807 CCTATTTTTGCAGCACTAAATATGTAC 57.549 33.333 16.66 0.00 0.00 2.90
291 292 9.450807 CTATTTTTGCAGCACTAAATATGTACC 57.549 33.333 16.66 0.00 0.00 3.34
292 293 7.461182 TTTTTGCAGCACTAAATATGTACCT 57.539 32.000 0.00 0.00 0.00 3.08
293 294 8.568676 TTTTTGCAGCACTAAATATGTACCTA 57.431 30.769 0.00 0.00 0.00 3.08
294 295 7.548196 TTTGCAGCACTAAATATGTACCTAC 57.452 36.000 0.00 0.00 0.00 3.18
295 296 5.286438 TGCAGCACTAAATATGTACCTACG 58.714 41.667 0.00 0.00 0.00 3.51
296 297 4.684703 GCAGCACTAAATATGTACCTACGG 59.315 45.833 0.00 0.00 0.00 4.02
297 298 5.227908 CAGCACTAAATATGTACCTACGGG 58.772 45.833 0.00 0.00 38.88 5.28
298 299 4.282703 AGCACTAAATATGTACCTACGGGG 59.717 45.833 0.00 0.00 41.89 5.73
299 300 4.281688 GCACTAAATATGTACCTACGGGGA 59.718 45.833 3.71 0.00 38.76 4.81
300 301 5.221501 GCACTAAATATGTACCTACGGGGAA 60.222 44.000 3.71 0.00 38.76 3.97
301 302 6.686126 GCACTAAATATGTACCTACGGGGAAA 60.686 42.308 3.71 0.00 38.76 3.13
302 303 6.927381 CACTAAATATGTACCTACGGGGAAAG 59.073 42.308 3.71 0.00 38.76 2.62
303 304 5.963214 AAATATGTACCTACGGGGAAAGT 57.037 39.130 3.71 0.00 38.76 2.66
304 305 4.950205 ATATGTACCTACGGGGAAAGTG 57.050 45.455 3.71 0.00 38.76 3.16
305 306 0.609662 TGTACCTACGGGGAAAGTGC 59.390 55.000 3.71 0.00 38.76 4.40
306 307 0.459063 GTACCTACGGGGAAAGTGCG 60.459 60.000 3.71 0.00 38.76 5.34
307 308 1.606885 TACCTACGGGGAAAGTGCGG 61.607 60.000 3.71 0.00 38.76 5.69
308 309 2.125269 CTACGGGGAAAGTGCGGG 60.125 66.667 0.00 0.00 0.00 6.13
309 310 4.397832 TACGGGGAAAGTGCGGGC 62.398 66.667 0.00 0.00 0.00 6.13
311 312 4.090588 CGGGGAAAGTGCGGGCTA 62.091 66.667 0.00 0.00 0.00 3.93
312 313 2.124695 GGGGAAAGTGCGGGCTAG 60.125 66.667 0.00 0.00 0.00 3.42
313 314 2.669240 GGGAAAGTGCGGGCTAGT 59.331 61.111 0.00 0.00 0.00 2.57
314 315 1.449778 GGGAAAGTGCGGGCTAGTC 60.450 63.158 0.00 0.00 0.00 2.59
315 316 1.295423 GGAAAGTGCGGGCTAGTCA 59.705 57.895 0.00 0.00 0.00 3.41
316 317 1.019805 GGAAAGTGCGGGCTAGTCAC 61.020 60.000 0.00 0.00 0.00 3.67
317 318 1.352156 GAAAGTGCGGGCTAGTCACG 61.352 60.000 0.00 0.02 35.97 4.35
318 319 2.781595 AAAGTGCGGGCTAGTCACGG 62.782 60.000 10.16 0.00 35.97 4.94
319 320 4.065281 GTGCGGGCTAGTCACGGT 62.065 66.667 10.16 0.00 0.00 4.83
320 321 4.063967 TGCGGGCTAGTCACGGTG 62.064 66.667 0.56 0.56 0.00 4.94
321 322 3.755628 GCGGGCTAGTCACGGTGA 61.756 66.667 6.76 6.76 0.00 4.02
333 334 4.111375 GTCACGGTGACAGTATGAATCT 57.889 45.455 30.78 0.00 46.22 2.40
334 335 4.495422 GTCACGGTGACAGTATGAATCTT 58.505 43.478 30.78 0.00 46.22 2.40
335 336 4.327357 GTCACGGTGACAGTATGAATCTTG 59.673 45.833 30.78 0.00 46.22 3.02
336 337 4.219725 TCACGGTGACAGTATGAATCTTGA 59.780 41.667 6.76 0.00 39.69 3.02
337 338 4.564372 CACGGTGACAGTATGAATCTTGAG 59.436 45.833 0.74 0.00 39.69 3.02
338 339 4.115516 CGGTGACAGTATGAATCTTGAGG 58.884 47.826 0.00 0.00 39.69 3.86
339 340 4.142160 CGGTGACAGTATGAATCTTGAGGA 60.142 45.833 0.00 0.00 39.69 3.71
340 341 5.624509 CGGTGACAGTATGAATCTTGAGGAA 60.625 44.000 0.00 0.00 39.69 3.36
341 342 6.352516 GGTGACAGTATGAATCTTGAGGAAT 58.647 40.000 0.00 0.00 39.69 3.01
342 343 7.500992 GGTGACAGTATGAATCTTGAGGAATA 58.499 38.462 0.00 0.00 39.69 1.75
343 344 7.439655 GGTGACAGTATGAATCTTGAGGAATAC 59.560 40.741 0.00 0.00 39.69 1.89
344 345 7.981789 GTGACAGTATGAATCTTGAGGAATACA 59.018 37.037 0.00 0.00 39.69 2.29
345 346 8.708378 TGACAGTATGAATCTTGAGGAATACAT 58.292 33.333 0.00 0.00 39.69 2.29
352 353 8.908786 TGAATCTTGAGGAATACATATTGACC 57.091 34.615 0.00 0.00 0.00 4.02
353 354 8.493607 TGAATCTTGAGGAATACATATTGACCA 58.506 33.333 0.00 0.00 0.00 4.02
354 355 9.342308 GAATCTTGAGGAATACATATTGACCAA 57.658 33.333 0.00 0.00 0.00 3.67
355 356 9.699410 AATCTTGAGGAATACATATTGACCAAA 57.301 29.630 0.00 0.00 0.00 3.28
356 357 8.506168 TCTTGAGGAATACATATTGACCAAAC 57.494 34.615 0.00 0.00 0.00 2.93
357 358 8.106462 TCTTGAGGAATACATATTGACCAAACA 58.894 33.333 0.00 0.00 0.00 2.83
358 359 8.642935 TTGAGGAATACATATTGACCAAACAA 57.357 30.769 0.00 0.00 0.00 2.83
359 360 8.279970 TGAGGAATACATATTGACCAAACAAG 57.720 34.615 0.00 0.00 33.22 3.16
360 361 8.106462 TGAGGAATACATATTGACCAAACAAGA 58.894 33.333 0.00 0.00 33.22 3.02
361 362 8.877864 AGGAATACATATTGACCAAACAAGAA 57.122 30.769 0.00 0.00 33.22 2.52
362 363 8.739972 AGGAATACATATTGACCAAACAAGAAC 58.260 33.333 0.00 0.00 33.22 3.01
363 364 8.739972 GGAATACATATTGACCAAACAAGAACT 58.260 33.333 0.00 0.00 33.22 3.01
364 365 9.774742 GAATACATATTGACCAAACAAGAACTC 57.225 33.333 0.00 0.00 33.22 3.01
365 366 9.520515 AATACATATTGACCAAACAAGAACTCT 57.479 29.630 0.00 0.00 33.22 3.24
366 367 7.823745 ACATATTGACCAAACAAGAACTCTT 57.176 32.000 0.00 0.00 36.45 2.85
384 385 8.507249 AGAACTCTTGTTGTTTTATAGTCATGC 58.493 33.333 0.00 0.00 36.39 4.06
385 386 7.744087 ACTCTTGTTGTTTTATAGTCATGCA 57.256 32.000 0.00 0.00 0.00 3.96
386 387 8.165239 ACTCTTGTTGTTTTATAGTCATGCAA 57.835 30.769 0.00 0.00 0.00 4.08
387 388 8.292448 ACTCTTGTTGTTTTATAGTCATGCAAG 58.708 33.333 0.00 0.00 0.00 4.01
388 389 8.389779 TCTTGTTGTTTTATAGTCATGCAAGA 57.610 30.769 0.00 0.00 37.05 3.02
389 390 9.013229 TCTTGTTGTTTTATAGTCATGCAAGAT 57.987 29.630 0.00 0.00 35.28 2.40
390 391 9.630098 CTTGTTGTTTTATAGTCATGCAAGATT 57.370 29.630 0.00 0.00 33.58 2.40
391 392 9.624697 TTGTTGTTTTATAGTCATGCAAGATTC 57.375 29.630 0.00 0.00 0.00 2.52
392 393 8.791675 TGTTGTTTTATAGTCATGCAAGATTCA 58.208 29.630 0.00 0.00 0.00 2.57
393 394 9.624697 GTTGTTTTATAGTCATGCAAGATTCAA 57.375 29.630 0.00 0.00 0.00 2.69
394 395 9.844790 TTGTTTTATAGTCATGCAAGATTCAAG 57.155 29.630 0.00 0.00 0.00 3.02
395 396 9.230122 TGTTTTATAGTCATGCAAGATTCAAGA 57.770 29.630 0.00 0.00 0.00 3.02
396 397 9.713740 GTTTTATAGTCATGCAAGATTCAAGAG 57.286 33.333 0.00 0.00 0.00 2.85
397 398 8.442632 TTTATAGTCATGCAAGATTCAAGAGG 57.557 34.615 0.00 0.00 0.00 3.69
398 399 4.564782 AGTCATGCAAGATTCAAGAGGA 57.435 40.909 0.00 0.00 0.00 3.71
399 400 4.260170 AGTCATGCAAGATTCAAGAGGAC 58.740 43.478 0.00 0.00 0.00 3.85
400 401 4.005650 GTCATGCAAGATTCAAGAGGACA 58.994 43.478 0.00 0.00 0.00 4.02
401 402 4.639310 GTCATGCAAGATTCAAGAGGACAT 59.361 41.667 0.00 0.00 0.00 3.06
402 403 4.638865 TCATGCAAGATTCAAGAGGACATG 59.361 41.667 0.00 0.00 34.99 3.21
403 404 2.751259 TGCAAGATTCAAGAGGACATGC 59.249 45.455 0.00 0.00 0.00 4.06
404 405 2.098770 GCAAGATTCAAGAGGACATGCC 59.901 50.000 0.00 0.00 0.00 4.40
405 406 3.349927 CAAGATTCAAGAGGACATGCCA 58.650 45.455 8.58 0.00 40.02 4.92
406 407 2.996631 AGATTCAAGAGGACATGCCAC 58.003 47.619 8.58 2.88 40.02 5.01
407 408 2.575279 AGATTCAAGAGGACATGCCACT 59.425 45.455 8.58 4.95 39.48 4.00
408 409 2.479566 TTCAAGAGGACATGCCACTC 57.520 50.000 8.58 6.40 36.48 3.51
409 410 0.615331 TCAAGAGGACATGCCACTCC 59.385 55.000 8.58 0.85 36.48 3.85
410 411 0.325933 CAAGAGGACATGCCACTCCA 59.674 55.000 8.58 0.00 36.48 3.86
411 412 1.067295 AAGAGGACATGCCACTCCAA 58.933 50.000 8.58 0.00 36.48 3.53
412 413 1.293062 AGAGGACATGCCACTCCAAT 58.707 50.000 8.58 0.00 40.02 3.16
413 414 2.481441 AGAGGACATGCCACTCCAATA 58.519 47.619 8.58 0.00 40.02 1.90
414 415 2.846206 AGAGGACATGCCACTCCAATAA 59.154 45.455 8.58 0.00 40.02 1.40
415 416 3.461085 AGAGGACATGCCACTCCAATAAT 59.539 43.478 8.58 0.00 40.02 1.28
416 417 3.559069 AGGACATGCCACTCCAATAATG 58.441 45.455 8.58 0.00 40.02 1.90
417 418 3.053395 AGGACATGCCACTCCAATAATGT 60.053 43.478 8.58 0.00 40.02 2.71
418 419 4.165950 AGGACATGCCACTCCAATAATGTA 59.834 41.667 8.58 0.00 40.02 2.29
419 420 5.072741 GGACATGCCACTCCAATAATGTAT 58.927 41.667 0.00 0.00 36.34 2.29
420 421 5.536161 GGACATGCCACTCCAATAATGTATT 59.464 40.000 0.00 0.00 36.34 1.89
421 422 6.040842 GGACATGCCACTCCAATAATGTATTT 59.959 38.462 0.00 0.00 36.34 1.40
422 423 7.417797 GGACATGCCACTCCAATAATGTATTTT 60.418 37.037 0.00 0.00 36.34 1.82
423 424 7.850193 ACATGCCACTCCAATAATGTATTTTT 58.150 30.769 0.00 0.00 0.00 1.94
441 442 4.391683 TTTTTCCCTATCCCCTCGTTTT 57.608 40.909 0.00 0.00 0.00 2.43
442 443 3.359695 TTTCCCTATCCCCTCGTTTTG 57.640 47.619 0.00 0.00 0.00 2.44
443 444 2.257391 TCCCTATCCCCTCGTTTTGA 57.743 50.000 0.00 0.00 0.00 2.69
444 445 2.553464 TCCCTATCCCCTCGTTTTGAA 58.447 47.619 0.00 0.00 0.00 2.69
445 446 2.914278 TCCCTATCCCCTCGTTTTGAAA 59.086 45.455 0.00 0.00 0.00 2.69
446 447 3.331294 TCCCTATCCCCTCGTTTTGAAAA 59.669 43.478 0.00 0.00 0.00 2.29
447 448 4.083565 CCCTATCCCCTCGTTTTGAAAAA 58.916 43.478 0.00 0.00 0.00 1.94
448 449 4.082408 CCCTATCCCCTCGTTTTGAAAAAC 60.082 45.833 8.32 8.32 43.61 2.43
449 450 4.082408 CCTATCCCCTCGTTTTGAAAAACC 60.082 45.833 11.92 0.00 44.05 3.27
450 451 2.033372 TCCCCTCGTTTTGAAAAACCC 58.967 47.619 11.92 0.00 44.05 4.11
451 452 2.036387 CCCCTCGTTTTGAAAAACCCT 58.964 47.619 11.92 0.00 44.05 4.34
452 453 2.223947 CCCCTCGTTTTGAAAAACCCTG 60.224 50.000 11.92 4.04 44.05 4.45
453 454 2.469826 CCTCGTTTTGAAAAACCCTGC 58.530 47.619 11.92 0.00 44.05 4.85
454 455 2.116366 CTCGTTTTGAAAAACCCTGCG 58.884 47.619 11.92 2.11 44.05 5.18
455 456 1.743958 TCGTTTTGAAAAACCCTGCGA 59.256 42.857 11.92 4.17 44.05 5.10
456 457 2.163815 TCGTTTTGAAAAACCCTGCGAA 59.836 40.909 11.92 0.00 44.05 4.70
457 458 3.120041 CGTTTTGAAAAACCCTGCGAAT 58.880 40.909 11.92 0.00 44.05 3.34
458 459 3.181575 CGTTTTGAAAAACCCTGCGAATC 59.818 43.478 11.92 0.00 44.05 2.52
459 460 4.116238 GTTTTGAAAAACCCTGCGAATCA 58.884 39.130 7.31 0.00 41.77 2.57
460 461 4.392921 TTTGAAAAACCCTGCGAATCAA 57.607 36.364 0.00 0.00 0.00 2.57
461 462 4.392921 TTGAAAAACCCTGCGAATCAAA 57.607 36.364 0.00 0.00 0.00 2.69
462 463 3.976169 TGAAAAACCCTGCGAATCAAAG 58.024 40.909 0.00 0.00 0.00 2.77
463 464 3.634448 TGAAAAACCCTGCGAATCAAAGA 59.366 39.130 0.00 0.00 0.00 2.52
464 465 3.923017 AAAACCCTGCGAATCAAAGAG 57.077 42.857 0.00 0.00 0.00 2.85
465 466 1.826385 AACCCTGCGAATCAAAGAGG 58.174 50.000 0.00 0.00 0.00 3.69
466 467 0.678048 ACCCTGCGAATCAAAGAGGC 60.678 55.000 0.00 0.00 0.00 4.70
467 468 0.393537 CCCTGCGAATCAAAGAGGCT 60.394 55.000 0.00 0.00 0.00 4.58
468 469 1.134401 CCCTGCGAATCAAAGAGGCTA 60.134 52.381 0.00 0.00 0.00 3.93
469 470 2.486191 CCCTGCGAATCAAAGAGGCTAT 60.486 50.000 0.00 0.00 0.00 2.97
470 471 3.244215 CCCTGCGAATCAAAGAGGCTATA 60.244 47.826 0.00 0.00 0.00 1.31
471 472 4.380531 CCTGCGAATCAAAGAGGCTATAA 58.619 43.478 0.00 0.00 0.00 0.98
472 473 4.450419 CCTGCGAATCAAAGAGGCTATAAG 59.550 45.833 0.00 0.00 0.00 1.73
473 474 4.380531 TGCGAATCAAAGAGGCTATAAGG 58.619 43.478 0.00 0.00 0.00 2.69
474 475 4.100963 TGCGAATCAAAGAGGCTATAAGGA 59.899 41.667 0.00 0.00 0.00 3.36
475 476 5.057149 GCGAATCAAAGAGGCTATAAGGAA 58.943 41.667 0.00 0.00 0.00 3.36
476 477 5.703130 GCGAATCAAAGAGGCTATAAGGAAT 59.297 40.000 0.00 0.00 0.00 3.01
477 478 6.205658 GCGAATCAAAGAGGCTATAAGGAATT 59.794 38.462 0.00 0.00 0.00 2.17
478 479 7.387948 GCGAATCAAAGAGGCTATAAGGAATTA 59.612 37.037 0.00 0.00 0.00 1.40
479 480 9.273016 CGAATCAAAGAGGCTATAAGGAATTAA 57.727 33.333 0.00 0.00 0.00 1.40
481 482 9.579932 AATCAAAGAGGCTATAAGGAATTAAGG 57.420 33.333 0.00 0.00 0.00 2.69
482 483 8.331931 TCAAAGAGGCTATAAGGAATTAAGGA 57.668 34.615 0.00 0.00 0.00 3.36
483 484 8.949421 TCAAAGAGGCTATAAGGAATTAAGGAT 58.051 33.333 0.00 0.00 0.00 3.24
486 487 8.974292 AGAGGCTATAAGGAATTAAGGATACA 57.026 34.615 0.00 0.00 41.41 2.29
487 488 9.567702 AGAGGCTATAAGGAATTAAGGATACAT 57.432 33.333 0.00 0.00 41.41 2.29
524 525 7.227049 TCATAGGAAATTTTTGTTCCACTCC 57.773 36.000 6.01 0.00 46.01 3.85
525 526 4.584327 AGGAAATTTTTGTTCCACTCCG 57.416 40.909 6.01 0.00 46.01 4.63
526 527 3.320826 AGGAAATTTTTGTTCCACTCCGG 59.679 43.478 0.00 0.00 46.01 5.14
527 528 3.554129 GGAAATTTTTGTTCCACTCCGGG 60.554 47.826 0.00 0.00 43.52 5.73
528 529 0.966179 ATTTTTGTTCCACTCCGGGC 59.034 50.000 0.00 0.00 34.36 6.13
529 530 1.110518 TTTTTGTTCCACTCCGGGCC 61.111 55.000 0.00 0.00 34.36 5.80
530 531 2.002018 TTTTGTTCCACTCCGGGCCT 62.002 55.000 0.84 0.00 34.36 5.19
531 532 1.128809 TTTGTTCCACTCCGGGCCTA 61.129 55.000 0.84 0.00 34.36 3.93
532 533 0.912487 TTGTTCCACTCCGGGCCTAT 60.912 55.000 0.84 0.00 34.36 2.57
533 534 0.912487 TGTTCCACTCCGGGCCTATT 60.912 55.000 0.84 0.00 34.36 1.73
534 535 0.255033 GTTCCACTCCGGGCCTATTT 59.745 55.000 0.84 0.00 34.36 1.40
535 536 0.254747 TTCCACTCCGGGCCTATTTG 59.745 55.000 0.84 0.00 34.36 2.32
536 537 0.619255 TCCACTCCGGGCCTATTTGA 60.619 55.000 0.84 0.00 34.36 2.69
537 538 0.474184 CCACTCCGGGCCTATTTGAT 59.526 55.000 0.84 0.00 0.00 2.57
538 539 1.133792 CCACTCCGGGCCTATTTGATT 60.134 52.381 0.84 0.00 0.00 2.57
539 540 2.222027 CACTCCGGGCCTATTTGATTC 58.778 52.381 0.84 0.00 0.00 2.52
540 541 1.843851 ACTCCGGGCCTATTTGATTCA 59.156 47.619 0.84 0.00 0.00 2.57
541 542 2.241176 ACTCCGGGCCTATTTGATTCAA 59.759 45.455 0.84 0.00 0.00 2.69
542 543 3.287222 CTCCGGGCCTATTTGATTCAAA 58.713 45.455 13.88 13.88 37.75 2.69
543 544 3.891366 CTCCGGGCCTATTTGATTCAAAT 59.109 43.478 23.96 23.96 44.74 2.32
544 545 3.636300 TCCGGGCCTATTTGATTCAAATG 59.364 43.478 27.24 18.64 42.91 2.32
545 546 3.636300 CCGGGCCTATTTGATTCAAATGA 59.364 43.478 27.24 14.34 42.91 2.57
546 547 4.281688 CCGGGCCTATTTGATTCAAATGAT 59.718 41.667 27.24 10.85 42.91 2.45
547 548 5.221501 CCGGGCCTATTTGATTCAAATGATT 60.222 40.000 27.24 10.54 42.91 2.57
548 549 6.282930 CGGGCCTATTTGATTCAAATGATTT 58.717 36.000 27.24 10.23 42.91 2.17
549 550 6.201425 CGGGCCTATTTGATTCAAATGATTTG 59.799 38.462 27.24 11.54 42.91 2.32
550 551 6.017687 GGGCCTATTTGATTCAAATGATTTGC 60.018 38.462 27.24 20.99 42.91 3.68
551 552 6.539464 GGCCTATTTGATTCAAATGATTTGCA 59.461 34.615 27.24 2.67 42.91 4.08
552 553 7.227910 GGCCTATTTGATTCAAATGATTTGCAT 59.772 33.333 27.24 7.87 42.91 3.96
553 554 9.263538 GCCTATTTGATTCAAATGATTTGCATA 57.736 29.630 27.24 9.22 42.91 3.14
557 558 9.893634 ATTTGATTCAAATGATTTGCATAGGAA 57.106 25.926 20.94 1.91 41.70 3.36
558 559 9.893634 TTTGATTCAAATGATTTGCATAGGAAT 57.106 25.926 12.86 6.51 40.06 3.01
559 560 9.893634 TTGATTCAAATGATTTGCATAGGAATT 57.106 25.926 12.86 0.00 38.72 2.17
560 561 9.893634 TGATTCAAATGATTTGCATAGGAATTT 57.106 25.926 12.86 0.00 38.72 1.82
568 569 8.806429 TGATTTGCATAGGAATTTTAGAGTGA 57.194 30.769 0.00 0.00 0.00 3.41
569 570 9.241919 TGATTTGCATAGGAATTTTAGAGTGAA 57.758 29.630 0.00 0.00 0.00 3.18
633 634 9.155975 AGGATCGAATTATATTGGATTTTCTCG 57.844 33.333 0.00 0.00 0.00 4.04
634 635 9.151471 GGATCGAATTATATTGGATTTTCTCGA 57.849 33.333 0.00 0.00 0.00 4.04
638 639 9.599322 CGAATTATATTGGATTTTCTCGAAAGG 57.401 33.333 0.00 0.00 0.00 3.11
642 643 9.681062 TTATATTGGATTTTCTCGAAAGGTTCT 57.319 29.630 0.00 0.00 0.00 3.01
643 644 5.941948 TTGGATTTTCTCGAAAGGTTCTC 57.058 39.130 0.00 0.00 0.00 2.87
644 645 5.228945 TGGATTTTCTCGAAAGGTTCTCT 57.771 39.130 0.00 0.00 0.00 3.10
645 646 5.621193 TGGATTTTCTCGAAAGGTTCTCTT 58.379 37.500 0.00 0.00 37.28 2.85
647 648 6.017109 TGGATTTTCTCGAAAGGTTCTCTTTG 60.017 38.462 0.00 0.00 45.00 2.77
648 649 4.813296 TTTCTCGAAAGGTTCTCTTTGC 57.187 40.909 0.00 0.00 45.00 3.68
649 650 3.469008 TCTCGAAAGGTTCTCTTTGCA 57.531 42.857 0.00 0.00 45.00 4.08
650 651 3.131396 TCTCGAAAGGTTCTCTTTGCAC 58.869 45.455 0.00 0.00 45.00 4.57
651 652 3.134458 CTCGAAAGGTTCTCTTTGCACT 58.866 45.455 0.00 0.00 45.00 4.40
652 653 3.541632 TCGAAAGGTTCTCTTTGCACTT 58.458 40.909 0.00 0.00 45.00 3.16
653 654 3.560068 TCGAAAGGTTCTCTTTGCACTTC 59.440 43.478 0.00 0.00 45.00 3.01
654 655 3.312421 CGAAAGGTTCTCTTTGCACTTCA 59.688 43.478 0.00 0.00 45.00 3.02
655 656 4.023707 CGAAAGGTTCTCTTTGCACTTCAT 60.024 41.667 0.00 0.00 45.00 2.57
656 657 5.506317 CGAAAGGTTCTCTTTGCACTTCATT 60.506 40.000 0.00 0.00 45.00 2.57
657 658 5.444663 AAGGTTCTCTTTGCACTTCATTC 57.555 39.130 0.00 0.00 29.99 2.67
658 659 3.823304 AGGTTCTCTTTGCACTTCATTCC 59.177 43.478 0.00 0.00 0.00 3.01
659 660 3.569701 GGTTCTCTTTGCACTTCATTCCA 59.430 43.478 0.00 0.00 0.00 3.53
660 661 4.320788 GGTTCTCTTTGCACTTCATTCCAG 60.321 45.833 0.00 0.00 0.00 3.86
661 662 4.356405 TCTCTTTGCACTTCATTCCAGA 57.644 40.909 0.00 0.00 0.00 3.86
662 663 4.321718 TCTCTTTGCACTTCATTCCAGAG 58.678 43.478 0.00 0.00 0.00 3.35
663 664 3.415212 TCTTTGCACTTCATTCCAGAGG 58.585 45.455 0.00 0.00 0.00 3.69
664 665 3.072915 TCTTTGCACTTCATTCCAGAGGA 59.927 43.478 0.00 0.00 0.00 3.71
665 666 3.507162 TTGCACTTCATTCCAGAGGAA 57.493 42.857 0.30 0.30 46.39 3.36
680 681 7.687941 TCCAGAGGAATTTTAACATTCACTC 57.312 36.000 14.60 15.90 35.18 3.51
681 682 7.230747 TCCAGAGGAATTTTAACATTCACTCA 58.769 34.615 21.76 9.31 35.27 3.41
682 683 7.890127 TCCAGAGGAATTTTAACATTCACTCAT 59.110 33.333 21.76 12.18 35.27 2.90
683 684 9.177608 CCAGAGGAATTTTAACATTCACTCATA 57.822 33.333 21.76 0.00 35.27 2.15
684 685 9.994432 CAGAGGAATTTTAACATTCACTCATAC 57.006 33.333 21.76 6.22 35.27 2.39
685 686 9.178758 AGAGGAATTTTAACATTCACTCATACC 57.821 33.333 21.76 6.19 35.27 2.73
686 687 9.178758 GAGGAATTTTAACATTCACTCATACCT 57.821 33.333 14.60 2.60 35.18 3.08
687 688 9.178758 AGGAATTTTAACATTCACTCATACCTC 57.821 33.333 14.60 0.00 35.18 3.85
688 689 9.178758 GGAATTTTAACATTCACTCATACCTCT 57.821 33.333 14.60 0.00 35.18 3.69
691 692 7.921786 TTTAACATTCACTCATACCTCTTGG 57.078 36.000 0.00 0.00 39.83 3.61
692 693 5.762179 AACATTCACTCATACCTCTTGGA 57.238 39.130 0.00 0.00 37.04 3.53
693 694 5.762179 ACATTCACTCATACCTCTTGGAA 57.238 39.130 0.00 0.00 37.04 3.53
694 695 5.738909 ACATTCACTCATACCTCTTGGAAG 58.261 41.667 0.00 0.00 37.04 3.46
695 696 5.485353 ACATTCACTCATACCTCTTGGAAGA 59.515 40.000 0.00 0.00 37.04 2.87
696 697 6.013379 ACATTCACTCATACCTCTTGGAAGAA 60.013 38.462 0.00 0.00 34.03 2.52
697 698 6.627087 TTCACTCATACCTCTTGGAAGAAT 57.373 37.500 0.00 0.00 34.03 2.40
698 699 6.227298 TCACTCATACCTCTTGGAAGAATC 57.773 41.667 0.00 0.00 34.03 2.52
699 700 5.721480 TCACTCATACCTCTTGGAAGAATCA 59.279 40.000 0.00 0.00 34.03 2.57
702 703 6.157645 ACTCATACCTCTTGGAAGAATCATGT 59.842 38.462 0.00 0.00 34.03 3.21
704 705 4.916041 ACCTCTTGGAAGAATCATGTGA 57.084 40.909 0.00 0.00 34.03 3.58
705 706 4.583871 ACCTCTTGGAAGAATCATGTGAC 58.416 43.478 0.00 0.00 34.03 3.67
711 712 3.758023 TGGAAGAATCATGTGACGCAATT 59.242 39.130 0.00 0.00 0.00 2.32
715 716 5.725110 AGAATCATGTGACGCAATTAGAC 57.275 39.130 0.00 0.00 0.00 2.59
718 719 4.661993 TCATGTGACGCAATTAGACAAC 57.338 40.909 0.00 0.00 0.00 3.32
720 721 4.152223 TCATGTGACGCAATTAGACAACAG 59.848 41.667 0.00 0.00 0.00 3.16
723 724 4.572795 TGTGACGCAATTAGACAACAGAAA 59.427 37.500 0.00 0.00 0.00 2.52
724 725 5.065346 TGTGACGCAATTAGACAACAGAAAA 59.935 36.000 0.00 0.00 0.00 2.29
725 726 6.142817 GTGACGCAATTAGACAACAGAAAAT 58.857 36.000 0.00 0.00 0.00 1.82
726 727 7.041712 TGTGACGCAATTAGACAACAGAAAATA 60.042 33.333 0.00 0.00 0.00 1.40
727 728 7.478667 GTGACGCAATTAGACAACAGAAAATAG 59.521 37.037 0.00 0.00 0.00 1.73
728 729 7.172532 TGACGCAATTAGACAACAGAAAATAGT 59.827 33.333 0.00 0.00 0.00 2.12
729 730 7.871853 ACGCAATTAGACAACAGAAAATAGTT 58.128 30.769 0.00 0.00 0.00 2.24
730 731 8.995220 ACGCAATTAGACAACAGAAAATAGTTA 58.005 29.630 0.00 0.00 0.00 2.24
731 732 9.262472 CGCAATTAGACAACAGAAAATAGTTAC 57.738 33.333 0.00 0.00 0.00 2.50
732 733 9.262472 GCAATTAGACAACAGAAAATAGTTACG 57.738 33.333 0.00 0.00 0.00 3.18
735 736 8.891671 TTAGACAACAGAAAATAGTTACGGTT 57.108 30.769 0.00 0.00 0.00 4.44
736 737 7.797038 AGACAACAGAAAATAGTTACGGTTT 57.203 32.000 0.00 0.00 0.00 3.27
737 738 7.636326 AGACAACAGAAAATAGTTACGGTTTG 58.364 34.615 0.00 0.00 0.00 2.93
738 739 7.496591 AGACAACAGAAAATAGTTACGGTTTGA 59.503 33.333 0.00 0.00 0.00 2.69
740 741 8.626526 ACAACAGAAAATAGTTACGGTTTGAAT 58.373 29.630 0.00 0.00 0.00 2.57
744 745 7.061789 CAGAAAATAGTTACGGTTTGAATTGGC 59.938 37.037 0.00 0.00 0.00 4.52
745 746 5.968528 AATAGTTACGGTTTGAATTGGCA 57.031 34.783 0.00 0.00 0.00 4.92
746 747 5.968528 ATAGTTACGGTTTGAATTGGCAA 57.031 34.783 0.68 0.68 0.00 4.52
754 755 4.436365 GTTTGAATTGGCAAACGACTTG 57.564 40.909 3.01 0.00 45.40 3.16
757 758 4.582701 TGAATTGGCAAACGACTTGAAT 57.417 36.364 3.01 0.00 37.17 2.57
758 759 4.545610 TGAATTGGCAAACGACTTGAATC 58.454 39.130 3.01 0.00 37.17 2.52
759 760 3.575965 ATTGGCAAACGACTTGAATCC 57.424 42.857 3.01 0.03 37.17 3.01
760 761 1.243902 TGGCAAACGACTTGAATCCC 58.756 50.000 6.25 0.00 37.17 3.85
761 762 0.526211 GGCAAACGACTTGAATCCCC 59.474 55.000 6.25 0.00 37.17 4.81
762 763 0.526211 GCAAACGACTTGAATCCCCC 59.474 55.000 6.25 0.00 37.17 5.40
763 764 0.802494 CAAACGACTTGAATCCCCCG 59.198 55.000 0.00 0.00 37.17 5.73
764 765 0.322187 AAACGACTTGAATCCCCCGG 60.322 55.000 0.00 0.00 0.00 5.73
765 766 2.189521 CGACTTGAATCCCCCGGG 59.810 66.667 15.80 15.80 0.00 5.73
766 767 2.595655 GACTTGAATCCCCCGGGG 59.404 66.667 34.65 34.65 46.11 5.73
767 768 2.204244 ACTTGAATCCCCCGGGGT 60.204 61.111 37.66 20.94 44.74 4.95
768 769 1.855451 ACTTGAATCCCCCGGGGTT 60.855 57.895 37.66 26.64 44.74 4.11
769 770 1.386550 CTTGAATCCCCCGGGGTTT 59.613 57.895 37.66 29.18 44.74 3.27
770 771 0.683179 CTTGAATCCCCCGGGGTTTC 60.683 60.000 37.66 34.14 46.35 2.78
771 772 3.092624 GAATCCCCCGGGGTTTCA 58.907 61.111 37.66 19.00 45.79 2.69
772 773 1.076995 GAATCCCCCGGGGTTTCAG 60.077 63.158 37.66 22.25 45.79 3.02
773 774 1.855451 AATCCCCCGGGGTTTCAGT 60.855 57.895 37.66 15.22 44.74 3.41
774 775 1.440362 AATCCCCCGGGGTTTCAGTT 61.440 55.000 37.66 18.77 44.74 3.16
775 776 1.859841 ATCCCCCGGGGTTTCAGTTC 61.860 60.000 37.66 0.00 44.74 3.01
776 777 2.535331 CCCCCGGGGTTTCAGTTCT 61.535 63.158 37.66 0.00 38.25 3.01
777 778 1.202769 CCCCCGGGGTTTCAGTTCTA 61.203 60.000 37.66 0.00 38.25 2.10
778 779 0.035725 CCCCGGGGTTTCAGTTCTAC 60.036 60.000 33.25 0.00 0.00 2.59
779 780 0.390735 CCCGGGGTTTCAGTTCTACG 60.391 60.000 14.71 0.00 0.00 3.51
780 781 0.604578 CCGGGGTTTCAGTTCTACGA 59.395 55.000 0.00 0.00 0.00 3.43
781 782 1.001181 CCGGGGTTTCAGTTCTACGAA 59.999 52.381 0.00 0.00 0.00 3.85
782 783 2.354403 CCGGGGTTTCAGTTCTACGAAT 60.354 50.000 0.00 0.00 0.00 3.34
783 784 2.928116 CGGGGTTTCAGTTCTACGAATC 59.072 50.000 0.00 0.00 0.00 2.52
784 785 3.615592 CGGGGTTTCAGTTCTACGAATCA 60.616 47.826 0.00 0.00 0.00 2.57
785 786 4.320870 GGGGTTTCAGTTCTACGAATCAA 58.679 43.478 0.00 0.00 0.00 2.57
786 787 4.758165 GGGGTTTCAGTTCTACGAATCAAA 59.242 41.667 0.00 0.00 0.00 2.69
787 788 5.106673 GGGGTTTCAGTTCTACGAATCAAAG 60.107 44.000 0.00 0.00 0.00 2.77
788 789 5.699458 GGGTTTCAGTTCTACGAATCAAAGA 59.301 40.000 0.00 0.00 0.00 2.52
789 790 6.128526 GGGTTTCAGTTCTACGAATCAAAGAG 60.129 42.308 0.00 0.00 0.00 2.85
790 791 6.645415 GGTTTCAGTTCTACGAATCAAAGAGA 59.355 38.462 0.00 0.00 0.00 3.10
791 792 7.359347 GGTTTCAGTTCTACGAATCAAAGAGAC 60.359 40.741 0.00 0.00 0.00 3.36
792 793 5.710984 TCAGTTCTACGAATCAAAGAGACC 58.289 41.667 0.00 0.00 0.00 3.85
793 794 4.865365 CAGTTCTACGAATCAAAGAGACCC 59.135 45.833 0.00 0.00 0.00 4.46
794 795 4.773149 AGTTCTACGAATCAAAGAGACCCT 59.227 41.667 0.00 0.00 0.00 4.34
795 796 4.985538 TCTACGAATCAAAGAGACCCTC 57.014 45.455 0.00 0.00 0.00 4.30
796 797 4.341487 TCTACGAATCAAAGAGACCCTCA 58.659 43.478 0.00 0.00 32.06 3.86
803 804 6.457934 CGAATCAAAGAGACCCTCAATCATTG 60.458 42.308 0.00 0.00 32.06 2.82
815 816 5.289595 CCTCAATCATTGCATGGAATTCTG 58.710 41.667 10.07 7.84 0.00 3.02
904 905 2.938838 TGTGTTTGGGAAAGTCCGAAT 58.061 42.857 0.00 0.00 37.43 3.34
910 911 6.419710 GTGTTTGGGAAAGTCCGAATAAAAAG 59.580 38.462 0.00 0.00 37.43 2.27
1013 1090 8.792633 TGAAATGCTTGTTATGCCTAATATACC 58.207 33.333 0.00 0.00 0.00 2.73
1092 1220 0.746659 AATTGCCCGAAGCTTATGCC 59.253 50.000 0.00 0.00 44.23 4.40
1106 1247 5.422145 AGCTTATGCCATTTTCAATCCAAC 58.578 37.500 0.00 0.00 40.80 3.77
1118 1259 3.659786 TCAATCCAACGGCGGATATTAG 58.340 45.455 13.24 0.00 45.39 1.73
1138 1279 6.585695 TTAGGCCTGTTATACCTCTATTCG 57.414 41.667 17.99 0.00 34.92 3.34
1171 1312 1.473788 CCTTTGTTTGGCAAGCTGCTT 60.474 47.619 15.19 9.53 44.28 3.91
1172 1313 1.595794 CTTTGTTTGGCAAGCTGCTTG 59.404 47.619 32.35 32.35 44.28 4.01
1175 1316 1.413445 TGTTTGGCAAGCTGCTTGAAT 59.587 42.857 38.49 6.13 43.42 2.57
1177 1318 2.443887 TTGGCAAGCTGCTTGAATTC 57.556 45.000 38.49 24.87 43.42 2.17
1178 1319 0.241749 TGGCAAGCTGCTTGAATTCG 59.758 50.000 38.49 17.02 43.42 3.34
1180 1321 1.334054 GCAAGCTGCTTGAATTCGTG 58.666 50.000 38.49 16.58 43.42 4.35
1181 1322 1.335324 GCAAGCTGCTTGAATTCGTGT 60.335 47.619 38.49 1.74 43.42 4.49
1182 1323 2.313234 CAAGCTGCTTGAATTCGTGTG 58.687 47.619 32.99 6.40 43.42 3.82
1183 1324 1.882912 AGCTGCTTGAATTCGTGTGA 58.117 45.000 0.00 0.00 0.00 3.58
1184 1325 1.532868 AGCTGCTTGAATTCGTGTGAC 59.467 47.619 0.00 0.00 0.00 3.67
1185 1326 1.722751 GCTGCTTGAATTCGTGTGACG 60.723 52.381 0.04 0.00 44.19 4.35
1186 1327 0.234625 TGCTTGAATTCGTGTGACGC 59.765 50.000 0.04 0.00 42.21 5.19
1190 3917 2.873170 TGAATTCGTGTGACGCAATC 57.127 45.000 0.04 0.00 42.21 2.67
1202 3929 3.544285 GTGACGCAATCAAACAAACGAAA 59.456 39.130 0.00 0.00 39.72 3.46
1203 3930 4.206200 GTGACGCAATCAAACAAACGAAAT 59.794 37.500 0.00 0.00 39.72 2.17
1204 3931 4.439449 TGACGCAATCAAACAAACGAAATC 59.561 37.500 0.00 0.00 33.02 2.17
1205 3932 3.733727 ACGCAATCAAACAAACGAAATCC 59.266 39.130 0.00 0.00 0.00 3.01
1206 3933 3.121113 CGCAATCAAACAAACGAAATCCC 59.879 43.478 0.00 0.00 0.00 3.85
1207 3934 4.054671 GCAATCAAACAAACGAAATCCCA 58.945 39.130 0.00 0.00 0.00 4.37
1210 3937 4.829064 TCAAACAAACGAAATCCCAGAG 57.171 40.909 0.00 0.00 0.00 3.35
1211 3938 3.568007 TCAAACAAACGAAATCCCAGAGG 59.432 43.478 0.00 0.00 0.00 3.69
1212 3939 1.534729 ACAAACGAAATCCCAGAGGC 58.465 50.000 0.00 0.00 0.00 4.70
1213 3940 1.073923 ACAAACGAAATCCCAGAGGCT 59.926 47.619 0.00 0.00 0.00 4.58
1216 3943 0.108138 ACGAAATCCCAGAGGCTTCG 60.108 55.000 11.99 11.99 45.95 3.79
1217 3944 0.175760 CGAAATCCCAGAGGCTTCGA 59.824 55.000 9.30 0.00 44.56 3.71
1222 3949 1.738099 CCCAGAGGCTTCGAACGTG 60.738 63.158 0.00 0.00 0.00 4.49
1224 3951 1.664649 CAGAGGCTTCGAACGTGCA 60.665 57.895 9.71 0.00 0.00 4.57
1225 3952 1.664965 AGAGGCTTCGAACGTGCAC 60.665 57.895 6.82 6.82 0.00 4.57
1230 3957 1.886861 GCTTCGAACGTGCACGACAT 61.887 55.000 42.94 27.88 43.02 3.06
1231 3958 0.506932 CTTCGAACGTGCACGACATT 59.493 50.000 42.94 27.81 43.02 2.71
1232 3959 0.231024 TTCGAACGTGCACGACATTG 59.769 50.000 42.94 28.86 43.02 2.82
1250 4082 2.489938 TGAATTTCCGTAGCAAGCCT 57.510 45.000 0.00 0.00 0.00 4.58
1290 4129 0.953960 CACCTACCGGGAAAGTGCAC 60.954 60.000 9.40 9.40 38.76 4.57
1297 4136 1.352156 CGGGAAAGTGCACGCTAGTC 61.352 60.000 12.01 5.54 0.00 2.59
1298 4137 0.320421 GGGAAAGTGCACGCTAGTCA 60.320 55.000 12.01 0.00 0.00 3.41
1299 4138 0.790814 GGAAAGTGCACGCTAGTCAC 59.209 55.000 12.01 0.00 0.00 3.67
1566 5038 1.119574 CATACCCCGTCCGGATCCTT 61.120 60.000 7.81 0.00 37.50 3.36
1637 5109 2.029200 TGTACATAACGGAAGCACGGAA 60.029 45.455 0.00 0.00 38.39 4.30
1653 5125 2.141535 GGAACGGATCGAGAATGGAG 57.858 55.000 0.00 0.00 0.00 3.86
1763 6211 0.388134 GGCAAGCTGCTGTTGATGTG 60.388 55.000 1.35 0.00 44.28 3.21
1810 6261 0.324091 GGAAGACGAGGAGGGGTACA 60.324 60.000 0.00 0.00 0.00 2.90
1973 6428 8.671921 GTCTATATATCTGCATCCATTGGTTTG 58.328 37.037 1.86 3.53 0.00 2.93
2001 6457 1.204146 GGAACAGAGCCCCTGACATA 58.796 55.000 10.30 0.00 45.78 2.29
2124 6580 1.004785 TGACGTACGTGCACAATCGG 61.005 55.000 28.16 2.02 0.00 4.18
2155 6611 0.467804 CCCCTCTTAGCTTCCTCTGC 59.532 60.000 0.00 0.00 0.00 4.26
2165 6621 1.462670 GCTTCCTCTGCTTCTTGAACG 59.537 52.381 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.223525 GGGAGTGTAAAGAGATCGTCGG 60.224 54.545 0.00 0.00 0.00 4.79
1 2 2.683867 AGGGAGTGTAAAGAGATCGTCG 59.316 50.000 0.00 0.00 0.00 5.12
21 22 8.218338 AGTGAATGCTACAATTCCTATCAAAG 57.782 34.615 0.00 0.00 35.98 2.77
25 26 7.792374 TTGAGTGAATGCTACAATTCCTATC 57.208 36.000 0.00 0.00 35.98 2.08
36 37 6.109156 TCTAAGTGGTTTGAGTGAATGCTA 57.891 37.500 0.00 0.00 0.00 3.49
38 39 5.689383 TTCTAAGTGGTTTGAGTGAATGC 57.311 39.130 0.00 0.00 0.00 3.56
69 70 1.565305 TTGTTGTTTGATTGCGGCAC 58.435 45.000 0.05 0.00 0.00 5.01
70 71 2.299993 TTTGTTGTTTGATTGCGGCA 57.700 40.000 0.00 0.00 0.00 5.69
71 72 3.665173 TTTTTGTTGTTTGATTGCGGC 57.335 38.095 0.00 0.00 0.00 6.53
99 100 2.569354 GCCACGGCCATTCAAACCA 61.569 57.895 2.24 0.00 34.56 3.67
111 112 1.988834 GCGGGATTAAAGTGCCACGG 61.989 60.000 0.00 0.00 0.00 4.94
128 129 3.976468 TCGTAGAATTGTAAAACCGCG 57.024 42.857 0.00 0.00 0.00 6.46
183 184 2.243407 TGCGTCACACGAAAAACAAAC 58.757 42.857 0.00 0.00 46.05 2.93
184 185 2.613730 TGCGTCACACGAAAAACAAA 57.386 40.000 0.00 0.00 46.05 2.83
231 232 6.977502 CGGAAATTAAATGGCATACACATTCA 59.022 34.615 0.00 0.00 37.55 2.57
243 244 4.097892 AGGCTTGCTACGGAAATTAAATGG 59.902 41.667 0.00 0.00 0.00 3.16
244 245 5.248870 AGGCTTGCTACGGAAATTAAATG 57.751 39.130 0.00 0.00 0.00 2.32
250 251 5.650543 CAAAAATAGGCTTGCTACGGAAAT 58.349 37.500 0.00 0.00 0.00 2.17
252 253 3.119637 GCAAAAATAGGCTTGCTACGGAA 60.120 43.478 0.00 0.00 43.68 4.30
253 254 2.422127 GCAAAAATAGGCTTGCTACGGA 59.578 45.455 0.00 0.00 43.68 4.69
255 256 3.429085 CTGCAAAAATAGGCTTGCTACG 58.571 45.455 9.32 0.00 46.49 3.51
256 257 3.182182 GCTGCAAAAATAGGCTTGCTAC 58.818 45.455 9.32 0.00 46.49 3.58
257 258 2.824936 TGCTGCAAAAATAGGCTTGCTA 59.175 40.909 0.00 0.00 46.49 3.49
258 259 1.619827 TGCTGCAAAAATAGGCTTGCT 59.380 42.857 0.00 0.00 46.49 3.91
259 260 1.728425 GTGCTGCAAAAATAGGCTTGC 59.272 47.619 2.77 0.00 46.53 4.01
260 261 3.308438 AGTGCTGCAAAAATAGGCTTG 57.692 42.857 2.77 0.00 0.00 4.01
261 262 5.467035 TTTAGTGCTGCAAAAATAGGCTT 57.533 34.783 2.77 0.00 0.00 4.35
262 263 5.665916 ATTTAGTGCTGCAAAAATAGGCT 57.334 34.783 17.67 6.44 0.00 4.58
263 264 6.980397 ACATATTTAGTGCTGCAAAAATAGGC 59.020 34.615 26.35 8.30 31.94 3.93
264 265 9.450807 GTACATATTTAGTGCTGCAAAAATAGG 57.549 33.333 25.57 25.57 33.86 2.57
265 266 9.450807 GGTACATATTTAGTGCTGCAAAAATAG 57.549 33.333 23.95 19.71 29.90 1.73
266 267 9.184523 AGGTACATATTTAGTGCTGCAAAAATA 57.815 29.630 22.90 22.90 0.00 1.40
267 268 8.066612 AGGTACATATTTAGTGCTGCAAAAAT 57.933 30.769 20.94 20.94 0.00 1.82
268 269 7.461182 AGGTACATATTTAGTGCTGCAAAAA 57.539 32.000 2.77 8.88 0.00 1.94
269 270 7.201574 CGTAGGTACATATTTAGTGCTGCAAAA 60.202 37.037 2.77 2.50 0.00 2.44
270 271 6.256975 CGTAGGTACATATTTAGTGCTGCAAA 59.743 38.462 2.77 0.00 0.00 3.68
271 272 5.751509 CGTAGGTACATATTTAGTGCTGCAA 59.248 40.000 2.77 0.00 0.00 4.08
272 273 5.286438 CGTAGGTACATATTTAGTGCTGCA 58.714 41.667 0.00 0.00 0.00 4.41
273 274 5.824243 CGTAGGTACATATTTAGTGCTGC 57.176 43.478 0.00 0.00 0.00 5.25
291 292 2.125269 CCCGCACTTTCCCCGTAG 60.125 66.667 0.00 0.00 0.00 3.51
292 293 4.397832 GCCCGCACTTTCCCCGTA 62.398 66.667 0.00 0.00 0.00 4.02
294 295 4.090588 TAGCCCGCACTTTCCCCG 62.091 66.667 0.00 0.00 0.00 5.73
295 296 2.124695 CTAGCCCGCACTTTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
296 297 1.449778 GACTAGCCCGCACTTTCCC 60.450 63.158 0.00 0.00 0.00 3.97
297 298 1.019805 GTGACTAGCCCGCACTTTCC 61.020 60.000 0.00 0.00 0.00 3.13
298 299 1.352156 CGTGACTAGCCCGCACTTTC 61.352 60.000 0.00 0.00 0.00 2.62
299 300 1.374252 CGTGACTAGCCCGCACTTT 60.374 57.895 0.00 0.00 0.00 2.66
300 301 2.261671 CGTGACTAGCCCGCACTT 59.738 61.111 0.00 0.00 0.00 3.16
301 302 3.760035 CCGTGACTAGCCCGCACT 61.760 66.667 0.00 0.00 0.00 4.40
302 303 4.065281 ACCGTGACTAGCCCGCAC 62.065 66.667 0.00 0.00 0.00 5.34
303 304 4.063967 CACCGTGACTAGCCCGCA 62.064 66.667 0.00 0.00 0.00 5.69
304 305 3.755628 TCACCGTGACTAGCCCGC 61.756 66.667 0.00 0.00 0.00 6.13
305 306 2.181021 GTCACCGTGACTAGCCCG 59.819 66.667 22.08 0.00 43.73 6.13
313 314 4.219725 TCAAGATTCATACTGTCACCGTGA 59.780 41.667 0.00 0.00 0.00 4.35
314 315 4.494484 TCAAGATTCATACTGTCACCGTG 58.506 43.478 0.00 0.00 0.00 4.94
315 316 4.382040 CCTCAAGATTCATACTGTCACCGT 60.382 45.833 0.00 0.00 0.00 4.83
316 317 4.115516 CCTCAAGATTCATACTGTCACCG 58.884 47.826 0.00 0.00 0.00 4.94
317 318 5.344743 TCCTCAAGATTCATACTGTCACC 57.655 43.478 0.00 0.00 0.00 4.02
318 319 7.981789 TGTATTCCTCAAGATTCATACTGTCAC 59.018 37.037 0.00 0.00 0.00 3.67
319 320 8.078060 TGTATTCCTCAAGATTCATACTGTCA 57.922 34.615 0.00 0.00 0.00 3.58
326 327 9.512588 GGTCAATATGTATTCCTCAAGATTCAT 57.487 33.333 0.00 0.00 0.00 2.57
327 328 8.493607 TGGTCAATATGTATTCCTCAAGATTCA 58.506 33.333 0.00 0.00 0.00 2.57
328 329 8.908786 TGGTCAATATGTATTCCTCAAGATTC 57.091 34.615 0.00 0.00 0.00 2.52
329 330 9.699410 TTTGGTCAATATGTATTCCTCAAGATT 57.301 29.630 0.00 0.00 0.00 2.40
330 331 9.125026 GTTTGGTCAATATGTATTCCTCAAGAT 57.875 33.333 0.00 0.00 0.00 2.40
331 332 8.106462 TGTTTGGTCAATATGTATTCCTCAAGA 58.894 33.333 0.00 0.00 0.00 3.02
332 333 8.279970 TGTTTGGTCAATATGTATTCCTCAAG 57.720 34.615 0.00 0.00 0.00 3.02
333 334 8.642935 TTGTTTGGTCAATATGTATTCCTCAA 57.357 30.769 0.00 0.00 0.00 3.02
334 335 8.106462 TCTTGTTTGGTCAATATGTATTCCTCA 58.894 33.333 0.00 0.00 0.00 3.86
335 336 8.506168 TCTTGTTTGGTCAATATGTATTCCTC 57.494 34.615 0.00 0.00 0.00 3.71
336 337 8.739972 GTTCTTGTTTGGTCAATATGTATTCCT 58.260 33.333 0.00 0.00 0.00 3.36
337 338 8.739972 AGTTCTTGTTTGGTCAATATGTATTCC 58.260 33.333 0.00 0.00 0.00 3.01
338 339 9.774742 GAGTTCTTGTTTGGTCAATATGTATTC 57.225 33.333 0.00 0.00 0.00 1.75
339 340 9.520515 AGAGTTCTTGTTTGGTCAATATGTATT 57.479 29.630 0.00 0.00 0.00 1.89
340 341 9.520515 AAGAGTTCTTGTTTGGTCAATATGTAT 57.479 29.630 0.00 0.00 34.38 2.29
341 342 8.783093 CAAGAGTTCTTGTTTGGTCAATATGTA 58.217 33.333 12.61 0.00 46.11 2.29
342 343 7.651808 CAAGAGTTCTTGTTTGGTCAATATGT 58.348 34.615 12.61 0.00 46.11 2.29
358 359 8.507249 GCATGACTATAAAACAACAAGAGTTCT 58.493 33.333 0.00 0.00 35.28 3.01
359 360 8.289618 TGCATGACTATAAAACAACAAGAGTTC 58.710 33.333 0.00 0.00 35.28 3.01
360 361 8.165239 TGCATGACTATAAAACAACAAGAGTT 57.835 30.769 0.00 0.00 38.88 3.01
361 362 7.744087 TGCATGACTATAAAACAACAAGAGT 57.256 32.000 0.00 0.00 0.00 3.24
362 363 8.506437 TCTTGCATGACTATAAAACAACAAGAG 58.494 33.333 0.00 0.00 36.66 2.85
363 364 8.389779 TCTTGCATGACTATAAAACAACAAGA 57.610 30.769 0.00 0.00 37.87 3.02
364 365 9.630098 AATCTTGCATGACTATAAAACAACAAG 57.370 29.630 4.14 0.00 35.31 3.16
365 366 9.624697 GAATCTTGCATGACTATAAAACAACAA 57.375 29.630 4.14 0.00 0.00 2.83
366 367 8.791675 TGAATCTTGCATGACTATAAAACAACA 58.208 29.630 4.14 0.00 0.00 3.33
367 368 9.624697 TTGAATCTTGCATGACTATAAAACAAC 57.375 29.630 4.14 0.00 0.00 3.32
368 369 9.844790 CTTGAATCTTGCATGACTATAAAACAA 57.155 29.630 4.14 3.07 0.00 2.83
369 370 9.230122 TCTTGAATCTTGCATGACTATAAAACA 57.770 29.630 4.14 0.00 0.00 2.83
370 371 9.713740 CTCTTGAATCTTGCATGACTATAAAAC 57.286 33.333 4.14 0.00 0.00 2.43
371 372 8.896744 CCTCTTGAATCTTGCATGACTATAAAA 58.103 33.333 4.14 0.00 0.00 1.52
372 373 8.267183 TCCTCTTGAATCTTGCATGACTATAAA 58.733 33.333 4.14 0.00 0.00 1.40
373 374 7.712639 GTCCTCTTGAATCTTGCATGACTATAA 59.287 37.037 4.14 0.00 0.00 0.98
374 375 7.147672 TGTCCTCTTGAATCTTGCATGACTATA 60.148 37.037 4.14 0.00 0.00 1.31
375 376 6.054295 GTCCTCTTGAATCTTGCATGACTAT 58.946 40.000 4.14 0.00 0.00 2.12
376 377 5.046376 TGTCCTCTTGAATCTTGCATGACTA 60.046 40.000 4.14 0.00 0.00 2.59
377 378 4.260170 GTCCTCTTGAATCTTGCATGACT 58.740 43.478 4.14 0.00 0.00 3.41
378 379 4.005650 TGTCCTCTTGAATCTTGCATGAC 58.994 43.478 4.14 0.00 0.00 3.06
379 380 4.290711 TGTCCTCTTGAATCTTGCATGA 57.709 40.909 4.57 4.57 0.00 3.07
380 381 4.733815 GCATGTCCTCTTGAATCTTGCATG 60.734 45.833 0.00 0.00 35.62 4.06
381 382 3.380637 GCATGTCCTCTTGAATCTTGCAT 59.619 43.478 0.00 0.00 32.24 3.96
382 383 2.751259 GCATGTCCTCTTGAATCTTGCA 59.249 45.455 0.00 0.00 32.24 4.08
383 384 2.098770 GGCATGTCCTCTTGAATCTTGC 59.901 50.000 0.00 0.00 0.00 4.01
384 385 3.128242 GTGGCATGTCCTCTTGAATCTTG 59.872 47.826 0.00 0.00 35.26 3.02
385 386 3.009916 AGTGGCATGTCCTCTTGAATCTT 59.990 43.478 0.00 0.00 35.22 2.40
386 387 2.575279 AGTGGCATGTCCTCTTGAATCT 59.425 45.455 0.00 0.00 35.22 2.40
387 388 2.941720 GAGTGGCATGTCCTCTTGAATC 59.058 50.000 10.66 0.00 38.71 2.52
388 389 2.356535 GGAGTGGCATGTCCTCTTGAAT 60.357 50.000 13.30 0.00 38.71 2.57
389 390 1.003580 GGAGTGGCATGTCCTCTTGAA 59.996 52.381 13.30 0.00 38.71 2.69
390 391 0.615331 GGAGTGGCATGTCCTCTTGA 59.385 55.000 13.30 0.00 38.71 3.02
391 392 0.325933 TGGAGTGGCATGTCCTCTTG 59.674 55.000 17.04 0.00 38.71 3.02
392 393 1.067295 TTGGAGTGGCATGTCCTCTT 58.933 50.000 17.04 0.00 38.71 2.85
393 394 1.293062 ATTGGAGTGGCATGTCCTCT 58.707 50.000 17.04 11.47 41.14 3.69
394 395 3.281727 TTATTGGAGTGGCATGTCCTC 57.718 47.619 17.04 7.24 33.57 3.71
395 396 3.053395 ACATTATTGGAGTGGCATGTCCT 60.053 43.478 17.04 0.00 33.57 3.85
396 397 3.290710 ACATTATTGGAGTGGCATGTCC 58.709 45.455 11.04 11.04 0.00 4.02
397 398 6.639632 AATACATTATTGGAGTGGCATGTC 57.360 37.500 0.00 0.00 0.00 3.06
398 399 7.422465 AAAATACATTATTGGAGTGGCATGT 57.578 32.000 0.00 0.00 0.00 3.21
420 421 4.083565 CAAAACGAGGGGATAGGGAAAAA 58.916 43.478 0.00 0.00 0.00 1.94
421 422 3.331294 TCAAAACGAGGGGATAGGGAAAA 59.669 43.478 0.00 0.00 0.00 2.29
422 423 2.914278 TCAAAACGAGGGGATAGGGAAA 59.086 45.455 0.00 0.00 0.00 3.13
423 424 2.553464 TCAAAACGAGGGGATAGGGAA 58.447 47.619 0.00 0.00 0.00 3.97
424 425 2.257391 TCAAAACGAGGGGATAGGGA 57.743 50.000 0.00 0.00 0.00 4.20
425 426 3.359695 TTTCAAAACGAGGGGATAGGG 57.640 47.619 0.00 0.00 0.00 3.53
426 427 4.082408 GGTTTTTCAAAACGAGGGGATAGG 60.082 45.833 8.67 0.00 47.00 2.57
427 428 4.082408 GGGTTTTTCAAAACGAGGGGATAG 60.082 45.833 8.67 0.00 47.00 2.08
428 429 3.827876 GGGTTTTTCAAAACGAGGGGATA 59.172 43.478 8.67 0.00 47.00 2.59
429 430 2.631062 GGGTTTTTCAAAACGAGGGGAT 59.369 45.455 8.67 0.00 47.00 3.85
430 431 2.033372 GGGTTTTTCAAAACGAGGGGA 58.967 47.619 8.67 0.00 47.00 4.81
431 432 2.036387 AGGGTTTTTCAAAACGAGGGG 58.964 47.619 8.67 0.00 47.00 4.79
432 433 2.801699 GCAGGGTTTTTCAAAACGAGGG 60.802 50.000 8.67 1.38 47.00 4.30
433 434 2.469826 GCAGGGTTTTTCAAAACGAGG 58.530 47.619 8.67 2.81 47.00 4.63
434 435 2.116366 CGCAGGGTTTTTCAAAACGAG 58.884 47.619 8.67 3.41 47.00 4.18
435 436 1.743958 TCGCAGGGTTTTTCAAAACGA 59.256 42.857 8.67 1.01 47.00 3.85
436 437 2.196295 TCGCAGGGTTTTTCAAAACG 57.804 45.000 8.67 0.00 47.00 3.60
437 438 4.116238 TGATTCGCAGGGTTTTTCAAAAC 58.884 39.130 6.61 6.61 45.70 2.43
438 439 4.392921 TGATTCGCAGGGTTTTTCAAAA 57.607 36.364 0.00 0.00 0.00 2.44
439 440 4.392921 TTGATTCGCAGGGTTTTTCAAA 57.607 36.364 0.00 0.00 0.00 2.69
440 441 4.098654 TCTTTGATTCGCAGGGTTTTTCAA 59.901 37.500 0.00 0.00 0.00 2.69
441 442 3.634448 TCTTTGATTCGCAGGGTTTTTCA 59.366 39.130 0.00 0.00 0.00 2.69
442 443 4.229876 CTCTTTGATTCGCAGGGTTTTTC 58.770 43.478 0.00 0.00 0.00 2.29
443 444 3.005791 CCTCTTTGATTCGCAGGGTTTTT 59.994 43.478 0.00 0.00 0.00 1.94
444 445 2.558359 CCTCTTTGATTCGCAGGGTTTT 59.442 45.455 0.00 0.00 0.00 2.43
445 446 2.162681 CCTCTTTGATTCGCAGGGTTT 58.837 47.619 0.00 0.00 0.00 3.27
446 447 1.826385 CCTCTTTGATTCGCAGGGTT 58.174 50.000 0.00 0.00 0.00 4.11
447 448 0.678048 GCCTCTTTGATTCGCAGGGT 60.678 55.000 0.00 0.00 0.00 4.34
448 449 0.393537 AGCCTCTTTGATTCGCAGGG 60.394 55.000 0.00 0.00 0.00 4.45
449 450 2.315925 TAGCCTCTTTGATTCGCAGG 57.684 50.000 0.00 0.00 0.00 4.85
450 451 4.450419 CCTTATAGCCTCTTTGATTCGCAG 59.550 45.833 0.00 0.00 0.00 5.18
451 452 4.100963 TCCTTATAGCCTCTTTGATTCGCA 59.899 41.667 0.00 0.00 0.00 5.10
452 453 4.632153 TCCTTATAGCCTCTTTGATTCGC 58.368 43.478 0.00 0.00 0.00 4.70
453 454 7.736447 AATTCCTTATAGCCTCTTTGATTCG 57.264 36.000 0.00 0.00 0.00 3.34
455 456 9.579932 CCTTAATTCCTTATAGCCTCTTTGATT 57.420 33.333 0.00 0.00 0.00 2.57
456 457 8.949421 TCCTTAATTCCTTATAGCCTCTTTGAT 58.051 33.333 0.00 0.00 0.00 2.57
457 458 8.331931 TCCTTAATTCCTTATAGCCTCTTTGA 57.668 34.615 0.00 0.00 0.00 2.69
460 461 9.393786 TGTATCCTTAATTCCTTATAGCCTCTT 57.606 33.333 0.00 0.00 0.00 2.85
461 462 8.974292 TGTATCCTTAATTCCTTATAGCCTCT 57.026 34.615 0.00 0.00 0.00 3.69
497 498 9.710900 GAGTGGAACAAAAATTTCCTATGAAAT 57.289 29.630 0.57 0.57 46.82 2.17
498 499 8.147704 GGAGTGGAACAAAAATTTCCTATGAAA 58.852 33.333 2.95 0.00 44.16 2.69
499 500 7.523052 CGGAGTGGAACAAAAATTTCCTATGAA 60.523 37.037 2.95 0.00 44.16 2.57
500 501 6.072175 CGGAGTGGAACAAAAATTTCCTATGA 60.072 38.462 2.95 0.00 44.16 2.15
501 502 6.092748 CGGAGTGGAACAAAAATTTCCTATG 58.907 40.000 2.95 0.00 44.16 2.23
502 503 5.185056 CCGGAGTGGAACAAAAATTTCCTAT 59.815 40.000 0.00 0.00 44.16 2.57
503 504 4.521256 CCGGAGTGGAACAAAAATTTCCTA 59.479 41.667 0.00 0.00 44.16 2.94
504 505 3.320826 CCGGAGTGGAACAAAAATTTCCT 59.679 43.478 0.00 0.00 44.16 3.36
505 506 3.554129 CCCGGAGTGGAACAAAAATTTCC 60.554 47.826 0.73 0.00 44.16 3.13
506 507 3.649073 CCCGGAGTGGAACAAAAATTTC 58.351 45.455 0.73 0.00 44.16 2.17
507 508 2.224185 GCCCGGAGTGGAACAAAAATTT 60.224 45.455 0.73 0.00 44.16 1.82
508 509 1.343142 GCCCGGAGTGGAACAAAAATT 59.657 47.619 0.73 0.00 44.16 1.82
509 510 0.966179 GCCCGGAGTGGAACAAAAAT 59.034 50.000 0.73 0.00 44.16 1.82
510 511 1.110518 GGCCCGGAGTGGAACAAAAA 61.111 55.000 0.73 0.00 44.16 1.94
511 512 1.529713 GGCCCGGAGTGGAACAAAA 60.530 57.895 0.73 0.00 44.16 2.44
512 513 1.128809 TAGGCCCGGAGTGGAACAAA 61.129 55.000 0.73 0.00 44.16 2.83
513 514 0.912487 ATAGGCCCGGAGTGGAACAA 60.912 55.000 0.73 0.00 44.16 2.83
514 515 0.912487 AATAGGCCCGGAGTGGAACA 60.912 55.000 0.73 0.00 41.43 3.18
515 516 0.255033 AAATAGGCCCGGAGTGGAAC 59.745 55.000 0.73 0.00 42.00 3.62
516 517 0.254747 CAAATAGGCCCGGAGTGGAA 59.745 55.000 0.73 0.00 42.00 3.53
517 518 0.619255 TCAAATAGGCCCGGAGTGGA 60.619 55.000 0.73 0.00 42.00 4.02
518 519 0.474184 ATCAAATAGGCCCGGAGTGG 59.526 55.000 0.73 0.00 37.55 4.00
519 520 2.222027 GAATCAAATAGGCCCGGAGTG 58.778 52.381 0.73 0.00 0.00 3.51
520 521 1.843851 TGAATCAAATAGGCCCGGAGT 59.156 47.619 0.73 0.00 0.00 3.85
521 522 2.638480 TGAATCAAATAGGCCCGGAG 57.362 50.000 0.73 0.00 0.00 4.63
522 523 3.374042 TTTGAATCAAATAGGCCCGGA 57.626 42.857 0.73 0.00 0.00 5.14
523 524 3.636300 TCATTTGAATCAAATAGGCCCGG 59.364 43.478 19.42 7.15 41.40 5.73
524 525 4.916983 TCATTTGAATCAAATAGGCCCG 57.083 40.909 19.42 7.79 41.40 6.13
525 526 6.017687 GCAAATCATTTGAATCAAATAGGCCC 60.018 38.462 19.42 5.17 41.40 5.80
526 527 6.539464 TGCAAATCATTTGAATCAAATAGGCC 59.461 34.615 19.42 0.00 41.40 5.19
527 528 7.542534 TGCAAATCATTTGAATCAAATAGGC 57.457 32.000 19.42 17.10 41.40 3.93
531 532 9.893634 TTCCTATGCAAATCATTTGAATCAAAT 57.106 25.926 14.65 14.86 43.71 2.32
532 533 9.893634 ATTCCTATGCAAATCATTTGAATCAAA 57.106 25.926 14.65 11.10 43.26 2.69
533 534 9.893634 AATTCCTATGCAAATCATTTGAATCAA 57.106 25.926 14.65 3.79 43.26 2.57
534 535 9.893634 AAATTCCTATGCAAATCATTTGAATCA 57.106 25.926 14.65 2.94 43.26 2.57
542 543 9.412460 TCACTCTAAAATTCCTATGCAAATCAT 57.588 29.630 0.00 0.00 39.17 2.45
543 544 8.806429 TCACTCTAAAATTCCTATGCAAATCA 57.194 30.769 0.00 0.00 0.00 2.57
607 608 9.155975 CGAGAAAATCCAATATAATTCGATCCT 57.844 33.333 0.00 0.00 0.00 3.24
608 609 9.151471 TCGAGAAAATCCAATATAATTCGATCC 57.849 33.333 0.00 0.00 0.00 3.36
612 613 9.599322 CCTTTCGAGAAAATCCAATATAATTCG 57.401 33.333 0.00 0.00 0.00 3.34
616 617 9.681062 AGAACCTTTCGAGAAAATCCAATATAA 57.319 29.630 0.00 0.00 34.02 0.98
617 618 9.326413 GAGAACCTTTCGAGAAAATCCAATATA 57.674 33.333 0.00 0.00 34.02 0.86
618 619 8.049721 AGAGAACCTTTCGAGAAAATCCAATAT 58.950 33.333 0.00 0.00 34.02 1.28
619 620 7.394816 AGAGAACCTTTCGAGAAAATCCAATA 58.605 34.615 0.00 0.00 34.02 1.90
620 621 6.241645 AGAGAACCTTTCGAGAAAATCCAAT 58.758 36.000 0.00 0.00 34.02 3.16
621 622 5.621193 AGAGAACCTTTCGAGAAAATCCAA 58.379 37.500 0.00 0.00 34.02 3.53
622 623 5.228945 AGAGAACCTTTCGAGAAAATCCA 57.771 39.130 0.00 0.00 34.02 3.41
623 624 6.374578 CAAAGAGAACCTTTCGAGAAAATCC 58.625 40.000 0.00 0.00 42.88 3.01
624 625 5.853810 GCAAAGAGAACCTTTCGAGAAAATC 59.146 40.000 0.00 0.09 42.88 2.17
625 626 5.299279 TGCAAAGAGAACCTTTCGAGAAAAT 59.701 36.000 0.00 0.00 42.88 1.82
626 627 4.638421 TGCAAAGAGAACCTTTCGAGAAAA 59.362 37.500 0.00 0.00 42.88 2.29
627 628 4.035208 GTGCAAAGAGAACCTTTCGAGAAA 59.965 41.667 0.00 0.00 42.88 2.52
628 629 3.560068 GTGCAAAGAGAACCTTTCGAGAA 59.440 43.478 0.00 0.00 42.88 2.87
629 630 3.131396 GTGCAAAGAGAACCTTTCGAGA 58.869 45.455 0.00 0.00 42.88 4.04
630 631 3.134458 AGTGCAAAGAGAACCTTTCGAG 58.866 45.455 0.00 0.00 42.88 4.04
631 632 3.194005 AGTGCAAAGAGAACCTTTCGA 57.806 42.857 0.00 0.00 42.88 3.71
632 633 3.312421 TGAAGTGCAAAGAGAACCTTTCG 59.688 43.478 0.00 0.00 42.88 3.46
633 634 4.900635 TGAAGTGCAAAGAGAACCTTTC 57.099 40.909 0.00 0.00 42.88 2.62
634 635 5.221322 GGAATGAAGTGCAAAGAGAACCTTT 60.221 40.000 0.00 0.00 45.48 3.11
635 636 4.279420 GGAATGAAGTGCAAAGAGAACCTT 59.721 41.667 0.00 0.00 36.47 3.50
636 637 3.823304 GGAATGAAGTGCAAAGAGAACCT 59.177 43.478 0.00 0.00 0.00 3.50
637 638 3.569701 TGGAATGAAGTGCAAAGAGAACC 59.430 43.478 0.00 0.00 0.00 3.62
638 639 4.516698 TCTGGAATGAAGTGCAAAGAGAAC 59.483 41.667 0.00 0.00 0.00 3.01
639 640 4.717877 TCTGGAATGAAGTGCAAAGAGAA 58.282 39.130 0.00 0.00 0.00 2.87
640 641 4.321718 CTCTGGAATGAAGTGCAAAGAGA 58.678 43.478 0.00 0.00 33.34 3.10
641 642 3.439476 CCTCTGGAATGAAGTGCAAAGAG 59.561 47.826 0.00 0.00 0.00 2.85
642 643 3.072915 TCCTCTGGAATGAAGTGCAAAGA 59.927 43.478 0.00 0.00 0.00 2.52
643 644 3.415212 TCCTCTGGAATGAAGTGCAAAG 58.585 45.455 0.00 0.00 0.00 2.77
644 645 3.507162 TCCTCTGGAATGAAGTGCAAA 57.493 42.857 0.00 0.00 0.00 3.68
645 646 3.507162 TTCCTCTGGAATGAAGTGCAA 57.493 42.857 0.00 0.00 36.71 4.08
655 656 7.723616 TGAGTGAATGTTAAAATTCCTCTGGAA 59.276 33.333 23.37 1.24 46.39 3.53
656 657 7.230747 TGAGTGAATGTTAAAATTCCTCTGGA 58.769 34.615 23.37 11.28 36.21 3.86
657 658 7.452880 TGAGTGAATGTTAAAATTCCTCTGG 57.547 36.000 23.37 0.00 36.21 3.86
658 659 9.994432 GTATGAGTGAATGTTAAAATTCCTCTG 57.006 33.333 23.37 0.00 36.21 3.35
659 660 9.178758 GGTATGAGTGAATGTTAAAATTCCTCT 57.821 33.333 23.37 17.88 36.21 3.69
660 661 9.178758 AGGTATGAGTGAATGTTAAAATTCCTC 57.821 33.333 19.77 19.77 35.98 3.71
661 662 9.178758 GAGGTATGAGTGAATGTTAAAATTCCT 57.821 33.333 14.54 11.16 35.98 3.36
662 663 9.178758 AGAGGTATGAGTGAATGTTAAAATTCC 57.821 33.333 14.54 7.17 35.98 3.01
665 666 8.960591 CCAAGAGGTATGAGTGAATGTTAAAAT 58.039 33.333 0.00 0.00 0.00 1.82
666 667 8.160765 TCCAAGAGGTATGAGTGAATGTTAAAA 58.839 33.333 0.00 0.00 35.89 1.52
667 668 7.685481 TCCAAGAGGTATGAGTGAATGTTAAA 58.315 34.615 0.00 0.00 35.89 1.52
668 669 7.252612 TCCAAGAGGTATGAGTGAATGTTAA 57.747 36.000 0.00 0.00 35.89 2.01
669 670 6.867519 TCCAAGAGGTATGAGTGAATGTTA 57.132 37.500 0.00 0.00 35.89 2.41
670 671 5.762179 TCCAAGAGGTATGAGTGAATGTT 57.238 39.130 0.00 0.00 35.89 2.71
671 672 5.485353 TCTTCCAAGAGGTATGAGTGAATGT 59.515 40.000 0.00 0.00 35.89 2.71
672 673 5.982356 TCTTCCAAGAGGTATGAGTGAATG 58.018 41.667 0.00 0.00 35.89 2.67
673 674 6.627087 TTCTTCCAAGAGGTATGAGTGAAT 57.373 37.500 0.00 0.00 36.22 2.57
674 675 6.213397 TGATTCTTCCAAGAGGTATGAGTGAA 59.787 38.462 0.00 0.00 36.22 3.18
675 676 5.721480 TGATTCTTCCAAGAGGTATGAGTGA 59.279 40.000 0.00 0.00 36.22 3.41
676 677 5.982356 TGATTCTTCCAAGAGGTATGAGTG 58.018 41.667 0.00 0.00 36.22 3.51
677 678 6.157645 ACATGATTCTTCCAAGAGGTATGAGT 59.842 38.462 0.00 0.00 36.22 3.41
678 679 6.482641 CACATGATTCTTCCAAGAGGTATGAG 59.517 42.308 0.00 4.87 36.22 2.90
679 680 6.156775 TCACATGATTCTTCCAAGAGGTATGA 59.843 38.462 0.00 2.86 36.22 2.15
680 681 6.259608 GTCACATGATTCTTCCAAGAGGTATG 59.740 42.308 0.00 0.00 36.22 2.39
681 682 6.352516 GTCACATGATTCTTCCAAGAGGTAT 58.647 40.000 0.00 0.00 36.22 2.73
682 683 5.624509 CGTCACATGATTCTTCCAAGAGGTA 60.625 44.000 0.00 0.00 36.22 3.08
683 684 4.583871 GTCACATGATTCTTCCAAGAGGT 58.416 43.478 0.00 0.00 36.22 3.85
684 685 3.620374 CGTCACATGATTCTTCCAAGAGG 59.380 47.826 0.00 0.00 36.22 3.69
685 686 3.063180 GCGTCACATGATTCTTCCAAGAG 59.937 47.826 0.00 0.00 36.22 2.85
686 687 3.002791 GCGTCACATGATTCTTCCAAGA 58.997 45.455 0.00 0.00 0.00 3.02
687 688 2.743664 TGCGTCACATGATTCTTCCAAG 59.256 45.455 0.00 0.00 0.00 3.61
688 689 2.777094 TGCGTCACATGATTCTTCCAA 58.223 42.857 0.00 0.00 0.00 3.53
689 690 2.470983 TGCGTCACATGATTCTTCCA 57.529 45.000 0.00 0.00 0.00 3.53
690 691 4.361451 AATTGCGTCACATGATTCTTCC 57.639 40.909 0.00 0.00 0.00 3.46
691 692 6.183360 TGTCTAATTGCGTCACATGATTCTTC 60.183 38.462 0.00 0.00 0.00 2.87
692 693 5.643348 TGTCTAATTGCGTCACATGATTCTT 59.357 36.000 0.00 0.00 0.00 2.52
693 694 5.178061 TGTCTAATTGCGTCACATGATTCT 58.822 37.500 0.00 0.00 0.00 2.40
694 695 5.469373 TGTCTAATTGCGTCACATGATTC 57.531 39.130 0.00 0.00 0.00 2.52
695 696 5.181056 TGTTGTCTAATTGCGTCACATGATT 59.819 36.000 0.00 0.00 0.00 2.57
696 697 4.694982 TGTTGTCTAATTGCGTCACATGAT 59.305 37.500 0.00 0.00 0.00 2.45
697 698 4.061596 TGTTGTCTAATTGCGTCACATGA 58.938 39.130 0.00 0.00 0.00 3.07
698 699 4.152223 TCTGTTGTCTAATTGCGTCACATG 59.848 41.667 0.00 0.00 0.00 3.21
699 700 4.314961 TCTGTTGTCTAATTGCGTCACAT 58.685 39.130 0.00 0.00 0.00 3.21
702 703 5.743026 TTTTCTGTTGTCTAATTGCGTCA 57.257 34.783 0.00 0.00 0.00 4.35
704 705 7.435068 ACTATTTTCTGTTGTCTAATTGCGT 57.565 32.000 0.00 0.00 0.00 5.24
705 706 9.262472 GTAACTATTTTCTGTTGTCTAATTGCG 57.738 33.333 0.00 0.00 0.00 4.85
711 712 8.767085 CAAACCGTAACTATTTTCTGTTGTCTA 58.233 33.333 0.00 0.00 0.00 2.59
715 716 9.458374 AATTCAAACCGTAACTATTTTCTGTTG 57.542 29.630 0.00 0.00 0.00 3.33
718 719 7.061789 GCCAATTCAAACCGTAACTATTTTCTG 59.938 37.037 0.00 0.00 0.00 3.02
720 721 6.864165 TGCCAATTCAAACCGTAACTATTTTC 59.136 34.615 0.00 0.00 0.00 2.29
723 724 5.968528 TGCCAATTCAAACCGTAACTATT 57.031 34.783 0.00 0.00 0.00 1.73
724 725 5.968528 TTGCCAATTCAAACCGTAACTAT 57.031 34.783 0.00 0.00 0.00 2.12
725 726 5.521544 GTTTGCCAATTCAAACCGTAACTA 58.478 37.500 10.28 0.00 46.02 2.24
726 727 4.364860 GTTTGCCAATTCAAACCGTAACT 58.635 39.130 10.28 0.00 46.02 2.24
727 728 4.702247 GTTTGCCAATTCAAACCGTAAC 57.298 40.909 10.28 0.00 46.02 2.50
735 736 4.377839 TTCAAGTCGTTTGCCAATTCAA 57.622 36.364 0.00 0.00 36.70 2.69
736 737 4.545610 GATTCAAGTCGTTTGCCAATTCA 58.454 39.130 0.00 0.00 36.70 2.57
737 738 3.920412 GGATTCAAGTCGTTTGCCAATTC 59.080 43.478 0.00 0.00 36.70 2.17
738 739 3.306019 GGGATTCAAGTCGTTTGCCAATT 60.306 43.478 0.00 0.00 36.70 2.32
740 741 1.611491 GGGATTCAAGTCGTTTGCCAA 59.389 47.619 0.00 0.00 36.70 4.52
744 745 0.802494 CGGGGGATTCAAGTCGTTTG 59.198 55.000 0.00 0.00 38.17 2.93
745 746 0.322187 CCGGGGGATTCAAGTCGTTT 60.322 55.000 0.00 0.00 0.00 3.60
746 747 1.298667 CCGGGGGATTCAAGTCGTT 59.701 57.895 0.00 0.00 0.00 3.85
748 749 2.189521 CCCGGGGGATTCAAGTCG 59.810 66.667 14.71 0.00 37.50 4.18
759 760 0.035725 GTAGAACTGAAACCCCGGGG 60.036 60.000 39.18 39.18 42.03 5.73
760 761 0.390735 CGTAGAACTGAAACCCCGGG 60.391 60.000 15.80 15.80 0.00 5.73
761 762 0.604578 TCGTAGAACTGAAACCCCGG 59.395 55.000 0.00 0.00 0.00 5.73
762 763 2.443887 TTCGTAGAACTGAAACCCCG 57.556 50.000 0.00 0.00 45.90 5.73
763 764 3.934068 TGATTCGTAGAACTGAAACCCC 58.066 45.455 0.00 0.00 45.90 4.95
764 765 5.699458 TCTTTGATTCGTAGAACTGAAACCC 59.301 40.000 0.00 0.00 45.90 4.11
765 766 6.645415 TCTCTTTGATTCGTAGAACTGAAACC 59.355 38.462 0.00 0.00 45.90 3.27
766 767 7.359347 GGTCTCTTTGATTCGTAGAACTGAAAC 60.359 40.741 0.00 0.00 45.90 2.78
767 768 6.645415 GGTCTCTTTGATTCGTAGAACTGAAA 59.355 38.462 0.00 0.00 45.90 2.69
768 769 6.157211 GGTCTCTTTGATTCGTAGAACTGAA 58.843 40.000 0.00 0.00 45.90 3.02
769 770 5.336531 GGGTCTCTTTGATTCGTAGAACTGA 60.337 44.000 0.00 0.00 45.90 3.41
770 771 4.865365 GGGTCTCTTTGATTCGTAGAACTG 59.135 45.833 0.00 0.00 45.90 3.16
771 772 4.773149 AGGGTCTCTTTGATTCGTAGAACT 59.227 41.667 0.00 0.00 45.90 3.01
772 773 5.074584 AGGGTCTCTTTGATTCGTAGAAC 57.925 43.478 0.00 0.00 45.90 3.01
773 774 4.770531 TGAGGGTCTCTTTGATTCGTAGAA 59.229 41.667 0.00 0.00 45.90 2.10
774 775 4.341487 TGAGGGTCTCTTTGATTCGTAGA 58.659 43.478 0.00 0.00 0.00 2.59
775 776 4.720649 TGAGGGTCTCTTTGATTCGTAG 57.279 45.455 0.00 0.00 0.00 3.51
776 777 5.186992 TGATTGAGGGTCTCTTTGATTCGTA 59.813 40.000 0.00 0.00 0.00 3.43
777 778 4.020218 TGATTGAGGGTCTCTTTGATTCGT 60.020 41.667 0.00 0.00 0.00 3.85
778 779 4.507710 TGATTGAGGGTCTCTTTGATTCG 58.492 43.478 0.00 0.00 0.00 3.34
779 780 6.679884 GCAATGATTGAGGGTCTCTTTGATTC 60.680 42.308 9.76 0.00 0.00 2.52
780 781 5.126707 GCAATGATTGAGGGTCTCTTTGATT 59.873 40.000 9.76 0.00 0.00 2.57
781 782 4.643784 GCAATGATTGAGGGTCTCTTTGAT 59.356 41.667 9.76 0.00 0.00 2.57
782 783 4.012374 GCAATGATTGAGGGTCTCTTTGA 58.988 43.478 9.76 0.00 0.00 2.69
783 784 3.760151 TGCAATGATTGAGGGTCTCTTTG 59.240 43.478 9.76 0.00 0.00 2.77
784 785 4.038271 TGCAATGATTGAGGGTCTCTTT 57.962 40.909 9.76 0.00 0.00 2.52
785 786 3.726557 TGCAATGATTGAGGGTCTCTT 57.273 42.857 9.76 0.00 0.00 2.85
786 787 3.947612 ATGCAATGATTGAGGGTCTCT 57.052 42.857 9.76 0.00 0.00 3.10
796 797 8.701895 ATCTTAACAGAATTCCATGCAATGATT 58.298 29.630 0.65 0.00 38.65 2.57
904 905 9.157104 GAAAACACAGGTTCAAAATCCTTTTTA 57.843 29.630 0.00 0.00 35.82 1.52
910 911 5.276461 AGGAAAACACAGGTTCAAAATCC 57.724 39.130 0.00 0.00 35.82 3.01
920 921 3.566351 AGGGAAAGAAGGAAAACACAGG 58.434 45.455 0.00 0.00 0.00 4.00
1068 1196 0.318120 AAGCTTCGGGCAATTTGGTG 59.682 50.000 0.00 0.00 44.79 4.17
1069 1197 1.917872 TAAGCTTCGGGCAATTTGGT 58.082 45.000 0.00 0.00 44.79 3.67
1077 1205 0.746659 AAATGGCATAAGCTTCGGGC 59.253 50.000 0.00 9.66 41.70 6.13
1092 1220 1.201181 TCCGCCGTTGGATTGAAAATG 59.799 47.619 0.00 0.00 31.53 2.32
1118 1259 4.868314 ACGAATAGAGGTATAACAGGCC 57.132 45.455 0.00 0.00 0.00 5.19
1171 1312 2.139118 TGATTGCGTCACACGAATTCA 58.861 42.857 6.22 0.00 46.05 2.57
1172 1313 2.873170 TGATTGCGTCACACGAATTC 57.127 45.000 0.00 0.00 46.05 2.17
1175 1316 1.666189 TGTTTGATTGCGTCACACGAA 59.334 42.857 0.00 0.00 46.05 3.85
1177 1318 2.098215 TTGTTTGATTGCGTCACACG 57.902 45.000 4.43 0.00 45.88 4.49
1178 1319 2.213131 CGTTTGTTTGATTGCGTCACAC 59.787 45.455 2.30 2.30 37.89 3.82
1180 1321 2.710760 TCGTTTGTTTGATTGCGTCAC 58.289 42.857 0.00 0.00 36.32 3.67
1181 1322 3.406728 TTCGTTTGTTTGATTGCGTCA 57.593 38.095 0.00 0.00 34.25 4.35
1182 1323 4.143618 GGATTTCGTTTGTTTGATTGCGTC 60.144 41.667 0.00 0.00 0.00 5.19
1183 1324 3.733727 GGATTTCGTTTGTTTGATTGCGT 59.266 39.130 0.00 0.00 0.00 5.24
1184 1325 3.121113 GGGATTTCGTTTGTTTGATTGCG 59.879 43.478 0.00 0.00 0.00 4.85
1185 1326 4.054671 TGGGATTTCGTTTGTTTGATTGC 58.945 39.130 0.00 0.00 0.00 3.56
1186 1327 5.527951 TCTGGGATTTCGTTTGTTTGATTG 58.472 37.500 0.00 0.00 0.00 2.67
1190 3917 3.857010 GCCTCTGGGATTTCGTTTGTTTG 60.857 47.826 0.00 0.00 33.58 2.93
1202 3929 1.258445 ACGTTCGAAGCCTCTGGGAT 61.258 55.000 0.00 0.00 33.58 3.85
1203 3930 1.906824 ACGTTCGAAGCCTCTGGGA 60.907 57.895 0.00 0.00 33.58 4.37
1204 3931 1.738099 CACGTTCGAAGCCTCTGGG 60.738 63.158 0.00 0.00 0.00 4.45
1205 3932 2.383527 GCACGTTCGAAGCCTCTGG 61.384 63.158 0.00 0.00 0.00 3.86
1206 3933 1.664649 TGCACGTTCGAAGCCTCTG 60.665 57.895 0.00 0.00 0.00 3.35
1207 3934 1.664965 GTGCACGTTCGAAGCCTCT 60.665 57.895 0.00 0.00 0.00 3.69
1210 3937 3.033764 TCGTGCACGTTCGAAGCC 61.034 61.111 35.74 0.00 40.80 4.35
1211 3938 1.886861 ATGTCGTGCACGTTCGAAGC 61.887 55.000 35.74 18.63 40.80 3.86
1212 3939 0.506932 AATGTCGTGCACGTTCGAAG 59.493 50.000 35.74 9.23 40.80 3.79
1213 3940 0.231024 CAATGTCGTGCACGTTCGAA 59.769 50.000 35.74 16.27 40.80 3.71
1216 3943 2.594529 ATTCAATGTCGTGCACGTTC 57.405 45.000 35.74 28.15 40.80 3.95
1217 3944 3.296628 GAAATTCAATGTCGTGCACGTT 58.703 40.909 35.74 21.94 40.80 3.99
1222 3949 2.611974 ACGGAAATTCAATGTCGTGC 57.388 45.000 0.00 0.00 0.00 5.34
1224 3951 3.331150 TGCTACGGAAATTCAATGTCGT 58.669 40.909 0.00 0.00 35.07 4.34
1225 3952 4.334443 CTTGCTACGGAAATTCAATGTCG 58.666 43.478 0.00 0.00 0.00 4.35
1230 3957 2.487762 CAGGCTTGCTACGGAAATTCAA 59.512 45.455 0.00 0.00 0.00 2.69
1231 3958 2.083774 CAGGCTTGCTACGGAAATTCA 58.916 47.619 0.00 0.00 0.00 2.57
1232 3959 2.084546 ACAGGCTTGCTACGGAAATTC 58.915 47.619 0.00 0.00 0.00 2.17
1250 4082 3.358707 CAGATTCAGTGCTGCAAAACA 57.641 42.857 2.77 0.00 0.00 2.83
1297 4136 2.448926 TTCATACTGTCACCGTGGTG 57.551 50.000 12.91 12.91 46.64 4.17
1298 4137 3.695830 AATTCATACTGTCACCGTGGT 57.304 42.857 0.00 0.00 0.00 4.16
1299 4138 3.426159 GCAAATTCATACTGTCACCGTGG 60.426 47.826 0.00 0.00 0.00 4.94
1310 4149 6.258727 TCCTCAAGATTCGAGCAAATTCATAC 59.741 38.462 0.00 0.00 0.00 2.39
1519 4590 2.930019 TGGCAGTGGGAGTGGAGG 60.930 66.667 0.00 0.00 0.00 4.30
1548 5019 0.484212 TAAGGATCCGGACGGGGTAT 59.516 55.000 6.12 0.00 36.01 2.73
1566 5038 6.033707 GCTTTGTCAAAGTACCATGAGGGTA 61.034 44.000 23.07 0.00 43.87 3.69
1637 5109 1.742768 GCCTCCATTCTCGATCCGT 59.257 57.895 0.00 0.00 0.00 4.69
1742 5214 2.986306 ATCAACAGCAGCTTGCCGC 61.986 57.895 0.00 0.00 46.52 6.53
1973 6428 2.019984 GGGCTCTGTTCCATCATCAAC 58.980 52.381 0.00 0.00 0.00 3.18
2105 6561 1.004785 CCGATTGTGCACGTACGTCA 61.005 55.000 19.94 16.28 0.00 4.35
2124 6580 2.671896 AAGAGGGGATCAATGGATGC 57.328 50.000 0.00 0.00 40.80 3.91
2155 6611 2.062779 CTCCGCGTCGTTCAAGAAG 58.937 57.895 4.92 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.