Multiple sequence alignment - TraesCS4B01G079300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G079300 chr4B 100.000 4244 0 0 1 4244 76820160 76815917 0.000000e+00 7838.0
1 TraesCS4B01G079300 chr4B 91.111 135 12 0 4100 4234 11930370 11930236 2.610000e-42 183.0
2 TraesCS4B01G079300 chr4D 90.799 3043 156 42 288 3263 52473687 52470702 0.000000e+00 3954.0
3 TraesCS4B01G079300 chr4D 93.962 265 10 2 3322 3583 52470701 52470440 3.080000e-106 396.0
4 TraesCS4B01G079300 chr4D 88.623 334 21 9 3625 3948 52470442 52470116 1.430000e-104 390.0
5 TraesCS4B01G079300 chr4D 87.973 291 19 9 6 293 52474269 52473992 3.160000e-86 329.0
6 TraesCS4B01G079300 chr4D 92.366 131 10 0 4099 4229 614654 614524 2.010000e-43 187.0
7 TraesCS4B01G079300 chr4A 88.443 1843 85 58 15 1816 544197568 544199323 0.000000e+00 2106.0
8 TraesCS4B01G079300 chr4A 87.978 1805 124 40 1813 3583 544199435 544201180 0.000000e+00 2045.0
9 TraesCS4B01G079300 chr4A 86.275 255 13 2 3623 3856 544201176 544201429 1.510000e-64 257.0
10 TraesCS4B01G079300 chr4A 95.161 62 3 0 3891 3952 544201496 544201557 9.710000e-17 99.0
11 TraesCS4B01G079300 chr2B 78.590 383 62 14 1067 1438 801162373 801162746 7.090000e-58 235.0
12 TraesCS4B01G079300 chr2B 95.312 128 6 0 4099 4226 65089958 65089831 2.000000e-48 204.0
13 TraesCS4B01G079300 chr2B 86.735 98 13 0 1718 1815 457109830 457109927 4.490000e-20 110.0
14 TraesCS4B01G079300 chr5B 89.444 180 15 3 1003 1180 582578443 582578620 1.540000e-54 224.0
15 TraesCS4B01G079300 chr5B 93.284 134 7 2 4097 4230 695950847 695950978 3.350000e-46 196.0
16 TraesCS4B01G079300 chr5B 89.623 106 11 0 1334 1439 90507905 90508010 7.400000e-28 135.0
17 TraesCS4B01G079300 chr5B 93.827 81 5 0 1257 1337 90507723 90507803 5.760000e-24 122.0
18 TraesCS4B01G079300 chr5B 93.333 60 1 2 3466 3524 222724779 222724836 7.560000e-13 86.1
19 TraesCS4B01G079300 chr2D 88.889 180 20 0 1259 1438 640298895 640298716 5.520000e-54 222.0
20 TraesCS4B01G079300 chr2D 92.366 131 10 0 4097 4227 605712257 605712387 2.010000e-43 187.0
21 TraesCS4B01G079300 chr2D 85.714 98 14 0 1718 1815 386249379 386249476 2.090000e-18 104.0
22 TraesCS4B01G079300 chr5A 88.889 180 16 3 1003 1180 594571046 594571223 7.140000e-53 219.0
23 TraesCS4B01G079300 chr5A 89.623 106 11 0 1334 1439 78158178 78158283 7.400000e-28 135.0
24 TraesCS4B01G079300 chr5A 93.827 81 5 0 1257 1337 78157975 78158055 5.760000e-24 122.0
25 TraesCS4B01G079300 chr5A 80.000 75 14 1 2130 2204 377799800 377799727 2.000000e-03 54.7
26 TraesCS4B01G079300 chr5D 87.778 180 18 3 1003 1180 475302630 475302807 1.550000e-49 207.0
27 TraesCS4B01G079300 chr5D 94.488 127 7 0 4100 4226 439810690 439810816 3.350000e-46 196.0
28 TraesCS4B01G079300 chr5D 89.623 106 11 0 1334 1439 82187575 82187680 7.400000e-28 135.0
29 TraesCS4B01G079300 chr6B 93.130 131 9 0 4096 4226 209249865 209249735 4.330000e-45 193.0
30 TraesCS4B01G079300 chr6B 93.130 131 8 1 4098 4227 632877611 632877741 1.560000e-44 191.0
31 TraesCS4B01G079300 chr3D 89.041 146 12 4 4100 4244 35819021 35819163 1.210000e-40 178.0
32 TraesCS4B01G079300 chr3D 92.683 82 6 0 1256 1337 487807612 487807693 7.450000e-23 119.0
33 TraesCS4B01G079300 chr3B 92.683 82 6 0 1256 1337 650797562 650797643 7.450000e-23 119.0
34 TraesCS4B01G079300 chr3A 92.683 82 6 0 1256 1337 631575994 631576075 7.450000e-23 119.0
35 TraesCS4B01G079300 chr1A 88.571 70 8 0 2134 2203 517519295 517519364 7.560000e-13 86.1
36 TraesCS4B01G079300 chr1D 86.957 69 9 0 2136 2204 421225823 421225891 1.270000e-10 78.7
37 TraesCS4B01G079300 chr7A 87.692 65 8 0 1576 1640 716239568 716239632 4.550000e-10 76.8
38 TraesCS4B01G079300 chr7D 87.500 64 8 0 1576 1639 620991886 620991823 1.640000e-09 75.0
39 TraesCS4B01G079300 chr7D 83.333 66 9 2 2118 2183 282190910 282190847 4.580000e-05 60.2
40 TraesCS4B01G079300 chr1B 81.429 70 12 1 2129 2198 180040776 180040708 5.930000e-04 56.5
41 TraesCS4B01G079300 chr7B 100.000 29 0 0 2130 2158 251947556 251947528 2.000000e-03 54.7
42 TraesCS4B01G079300 chr2A 85.185 54 7 1 2130 2183 481816535 481816587 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G079300 chr4B 76815917 76820160 4243 True 7838.00 7838 100.00000 1 4244 1 chr4B.!!$R2 4243
1 TraesCS4B01G079300 chr4D 52470116 52474269 4153 True 1267.25 3954 90.33925 6 3948 4 chr4D.!!$R2 3942
2 TraesCS4B01G079300 chr4A 544197568 544201557 3989 False 1126.75 2106 89.46425 15 3952 4 chr4A.!!$F1 3937

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.392461 TGCCCTAATCAAGACGGCAC 60.392 55.0 0.00 0.00 44.48 5.01 F
1224 1600 0.178767 CATCTTCCTGCATGGGACGA 59.821 55.0 3.99 3.99 37.89 4.20 F
1482 1858 0.181114 TCCTTTCCATGCCTCATCGG 59.819 55.0 0.00 0.00 0.00 4.18 F
3027 3584 0.545171 CAGCTGACCTGGTGGATGAT 59.455 55.0 8.42 0.00 37.93 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1988 2498 0.318699 TGAAGAACCGACGACTGCAG 60.319 55.0 13.48 13.48 0.00 4.41 R
2505 3050 0.028242 CGCAGAGTCTAGCAGTACCG 59.972 60.0 12.88 0.00 0.00 4.02 R
3168 3725 0.038618 CAAGGTCGTCCATGTCGTCA 60.039 55.0 0.51 0.00 35.89 4.35 R
4098 4765 0.037160 TTTTGGGGCGAAGGGAGTAC 59.963 55.0 0.00 0.00 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 1.068816 CGTCCGTTTGGGTTTTGGATC 60.069 52.381 0.00 0.00 37.00 3.36
55 56 3.089284 GTTTGGGTTTTGGATCGGAGAT 58.911 45.455 0.00 0.00 45.12 2.75
75 76 0.392461 TGCCCTAATCAAGACGGCAC 60.392 55.000 0.00 0.00 44.48 5.01
97 98 2.158430 ACCAAACCGACCCAACCTAATT 60.158 45.455 0.00 0.00 0.00 1.40
110 111 5.529060 CCCAACCTAATTCAGTCATTAGCTC 59.471 44.000 0.00 0.00 35.97 4.09
155 157 3.984292 GCTGTTGCCGAAATGAGAG 57.016 52.632 0.00 0.00 0.00 3.20
263 268 4.377897 CTCAACTTACCGACCTGAAGTTT 58.622 43.478 0.00 0.00 40.54 2.66
264 269 4.773013 TCAACTTACCGACCTGAAGTTTT 58.227 39.130 0.00 0.00 40.54 2.43
347 676 4.096003 CCCACCACCCTACGCCTG 62.096 72.222 0.00 0.00 0.00 4.85
348 677 4.096003 CCACCACCCTACGCCTGG 62.096 72.222 0.00 0.00 0.00 4.45
376 717 1.611977 TCCTACAACAGACACCGACAG 59.388 52.381 0.00 0.00 0.00 3.51
379 720 2.029073 AACAGACACCGACAGCCG 59.971 61.111 0.00 0.00 38.18 5.52
425 766 0.602638 GGTCTGCACGTCATTGACCA 60.603 55.000 12.74 3.04 44.59 4.02
584 926 1.137086 CACCGGACTGGAACTGGATAG 59.863 57.143 9.46 0.00 42.00 2.08
585 927 1.273098 ACCGGACTGGAACTGGATAGT 60.273 52.381 9.46 0.00 42.00 2.12
586 928 2.024655 ACCGGACTGGAACTGGATAGTA 60.025 50.000 9.46 0.00 42.00 1.82
630 972 7.229506 AGCGGAGAGGGAAAAATATTAAAGATG 59.770 37.037 0.00 0.00 0.00 2.90
641 983 8.450578 AAAATATTAAAGATGGAGCGATCACA 57.549 30.769 1.84 0.00 0.00 3.58
643 985 2.029838 AAAGATGGAGCGATCACACC 57.970 50.000 1.84 0.00 0.00 4.16
651 993 2.815211 CGATCACACCCGCACAGG 60.815 66.667 0.00 0.00 40.63 4.00
691 1041 2.806244 AGAGCGCGGCGATTTTATTAAT 59.194 40.909 28.54 0.00 0.00 1.40
692 1042 3.991773 AGAGCGCGGCGATTTTATTAATA 59.008 39.130 28.54 0.00 0.00 0.98
693 1043 4.091509 AGAGCGCGGCGATTTTATTAATAG 59.908 41.667 28.54 0.00 0.00 1.73
694 1044 2.838452 GCGCGGCGATTTTATTAATAGC 59.162 45.455 28.54 0.00 0.00 2.97
695 1045 3.081445 CGCGGCGATTTTATTAATAGCG 58.919 45.455 19.16 6.97 38.00 4.26
696 1046 3.181538 CGCGGCGATTTTATTAATAGCGA 60.182 43.478 19.16 0.00 45.60 4.93
697 1047 4.323751 GCGGCGATTTTATTAATAGCGAG 58.676 43.478 12.98 3.44 0.00 5.03
698 1048 4.090930 GCGGCGATTTTATTAATAGCGAGA 59.909 41.667 12.98 0.00 0.00 4.04
760 1110 2.044888 GCGAGGCGATAGAGAGAAAG 57.955 55.000 0.00 0.00 39.76 2.62
761 1111 1.335506 GCGAGGCGATAGAGAGAAAGG 60.336 57.143 0.00 0.00 39.76 3.11
762 1112 2.222886 CGAGGCGATAGAGAGAAAGGA 58.777 52.381 0.00 0.00 39.76 3.36
763 1113 2.225491 CGAGGCGATAGAGAGAAAGGAG 59.775 54.545 0.00 0.00 39.76 3.69
764 1114 2.556622 GAGGCGATAGAGAGAAAGGAGG 59.443 54.545 0.00 0.00 39.76 4.30
765 1115 1.616374 GGCGATAGAGAGAAAGGAGGG 59.384 57.143 0.00 0.00 39.76 4.30
766 1116 1.000394 GCGATAGAGAGAAAGGAGGGC 60.000 57.143 0.00 0.00 39.76 5.19
806 1156 2.124570 CCTCCGCCCAATCCAGTG 60.125 66.667 0.00 0.00 0.00 3.66
807 1157 2.825836 CTCCGCCCAATCCAGTGC 60.826 66.667 0.00 0.00 0.00 4.40
808 1158 3.626996 CTCCGCCCAATCCAGTGCA 62.627 63.158 0.00 0.00 0.00 4.57
809 1159 3.136123 CCGCCCAATCCAGTGCAG 61.136 66.667 0.00 0.00 0.00 4.41
810 1160 2.360350 CGCCCAATCCAGTGCAGT 60.360 61.111 0.00 0.00 0.00 4.40
865 1218 7.495934 TCATCATCAGCTAACTAAACTAAAGGC 59.504 37.037 0.00 0.00 0.00 4.35
890 1249 1.082690 GGCAAGGCTTCTTTCTCTCG 58.917 55.000 0.00 0.00 0.00 4.04
891 1250 0.445829 GCAAGGCTTCTTTCTCTCGC 59.554 55.000 0.00 0.00 0.00 5.03
892 1251 1.943507 GCAAGGCTTCTTTCTCTCGCT 60.944 52.381 0.00 0.00 0.00 4.93
893 1252 1.999024 CAAGGCTTCTTTCTCTCGCTC 59.001 52.381 0.00 0.00 0.00 5.03
994 1354 1.772561 AAAGGGGAGAGGGGAGGGAA 61.773 60.000 0.00 0.00 0.00 3.97
995 1355 2.040359 GGGGAGAGGGGAGGGAAG 60.040 72.222 0.00 0.00 0.00 3.46
996 1356 2.647949 GGGGAGAGGGGAGGGAAGA 61.648 68.421 0.00 0.00 0.00 2.87
1217 1593 4.472833 ACTAGGTTCTTCATCTTCCTGCAT 59.527 41.667 0.00 0.00 0.00 3.96
1224 1600 0.178767 CATCTTCCTGCATGGGACGA 59.821 55.000 3.99 3.99 37.89 4.20
1249 1625 3.571119 GCTGAAGAGCACGCATGT 58.429 55.556 0.00 0.00 45.46 3.21
1250 1626 1.871772 GCTGAAGAGCACGCATGTT 59.128 52.632 0.00 0.00 45.46 2.71
1251 1627 0.453950 GCTGAAGAGCACGCATGTTG 60.454 55.000 0.00 0.00 45.46 3.33
1252 1628 1.150827 CTGAAGAGCACGCATGTTGA 58.849 50.000 0.00 0.00 0.00 3.18
1254 1630 2.153645 TGAAGAGCACGCATGTTGATT 58.846 42.857 0.00 0.00 0.00 2.57
1255 1631 2.553602 TGAAGAGCACGCATGTTGATTT 59.446 40.909 0.00 0.00 0.00 2.17
1476 1852 0.627986 CTCCCTTCCTTTCCATGCCT 59.372 55.000 0.00 0.00 0.00 4.75
1482 1858 0.181114 TCCTTTCCATGCCTCATCGG 59.819 55.000 0.00 0.00 0.00 4.18
1531 1907 0.782384 GTTTCTGCGTACGTGGACTG 59.218 55.000 17.90 4.25 0.00 3.51
1542 1918 2.103373 ACGTGGACTGCTACTGATCAT 58.897 47.619 0.00 0.00 0.00 2.45
1651 2027 5.304357 CACTCCATGGTAACCTTTCCTTTTT 59.696 40.000 12.58 0.00 0.00 1.94
1655 2031 4.267341 TGGTAACCTTTCCTTTTTGGGA 57.733 40.909 0.00 0.00 36.20 4.37
1661 2037 5.079998 ACCTTTCCTTTTTGGGAGATTCT 57.920 39.130 0.00 0.00 36.66 2.40
1754 2131 2.435805 TGACTTGAAGCTGGAGAACACT 59.564 45.455 0.00 0.00 0.00 3.55
1836 2328 9.924650 AGGTACAGTACTTACTAAAACAAGATG 57.075 33.333 10.62 0.00 34.13 2.90
1856 2353 0.601046 CTTGCTTCACTGTCGCAGGA 60.601 55.000 10.80 3.79 35.51 3.86
1871 2368 2.687700 CAGGATTGCAGTCTACAGCT 57.312 50.000 9.27 0.00 0.00 4.24
1873 2370 4.128925 CAGGATTGCAGTCTACAGCTAA 57.871 45.455 9.27 0.00 0.00 3.09
1876 2373 3.868077 GGATTGCAGTCTACAGCTAACAG 59.132 47.826 9.27 0.00 0.00 3.16
1883 2380 5.525378 GCAGTCTACAGCTAACAGCATATTT 59.475 40.000 0.38 0.00 45.56 1.40
1891 2390 6.037610 ACAGCTAACAGCATATTTTACTCTGC 59.962 38.462 0.38 0.00 45.56 4.26
1909 2408 2.496871 CTGCTTACATGCCAAATTGGGA 59.503 45.455 14.59 11.97 43.78 4.37
1925 2424 1.908619 TGGGAGTTATGCTCTGCTTGA 59.091 47.619 0.00 0.00 43.62 3.02
1950 2453 5.223449 TCCTAGTTTTTGTGTCCTAGTGG 57.777 43.478 0.00 0.00 0.00 4.00
1954 2457 5.568620 AGTTTTTGTGTCCTAGTGGATCT 57.431 39.130 0.00 0.00 45.29 2.75
1963 2466 5.067544 GTGTCCTAGTGGATCTACCTGTTAC 59.932 48.000 5.47 0.00 45.29 2.50
1980 2483 5.334414 CCTGTTACTCTGCTCATTGTTGTTC 60.334 44.000 0.00 0.00 0.00 3.18
1988 2498 3.125146 TGCTCATTGTTGTTCTGCGTATC 59.875 43.478 0.00 0.00 0.00 2.24
2017 2527 1.425428 GGTTCTTCATTCGCAGCCG 59.575 57.895 0.00 0.00 0.00 5.52
2029 2539 1.134694 GCAGCCGAAATCAACCGTC 59.865 57.895 0.00 0.00 0.00 4.79
2092 2602 8.050316 AGAAGGAATATGATGGAAAGGTATGT 57.950 34.615 0.00 0.00 0.00 2.29
2179 2689 8.630037 CCGAAATACTTATAGCCCTGAAATTTT 58.370 33.333 0.00 0.00 0.00 1.82
2190 2700 4.323409 GCCCTGAAATTTTGAGCCCAATTA 60.323 41.667 0.00 0.00 31.46 1.40
2316 2848 3.380479 TCTCAGTGACGTCCGAATTTT 57.620 42.857 14.12 0.00 0.00 1.82
2343 2880 7.784633 TTGTTTCTGAAATTAAAAGCCTTGG 57.215 32.000 6.06 0.00 0.00 3.61
2362 2899 3.213506 TGGTGCATACATATTGGTGCTC 58.786 45.455 0.00 0.00 35.23 4.26
2363 2900 2.554032 GGTGCATACATATTGGTGCTCC 59.446 50.000 0.00 0.00 38.53 4.70
2364 2901 3.213506 GTGCATACATATTGGTGCTCCA 58.786 45.455 2.64 2.64 42.66 3.86
2365 2902 3.822735 GTGCATACATATTGGTGCTCCAT 59.177 43.478 8.61 1.95 43.91 3.41
2366 2903 3.822167 TGCATACATATTGGTGCTCCATG 59.178 43.478 8.61 6.83 43.91 3.66
2367 2904 3.192001 GCATACATATTGGTGCTCCATGG 59.808 47.826 8.61 4.97 43.91 3.66
2368 2905 4.654915 CATACATATTGGTGCTCCATGGA 58.345 43.478 15.27 15.27 43.91 3.41
2420 2957 7.227873 TCCTGATCCTGTTGTTTTGTGTAATA 58.772 34.615 0.00 0.00 0.00 0.98
2481 3018 4.453136 ACATTGTGAAGCATTTCCATTTGC 59.547 37.500 0.00 0.00 39.17 3.68
2505 3050 7.571026 GCGAGATGCATGATATATATTCCAAC 58.429 38.462 2.46 0.00 45.45 3.77
2512 3057 7.763985 TGCATGATATATATTCCAACGGTACTG 59.236 37.037 0.00 0.00 0.00 2.74
2528 3073 0.743688 ACTGCTAGACTCTGCGATGG 59.256 55.000 0.00 0.00 0.00 3.51
2529 3074 0.597118 CTGCTAGACTCTGCGATGGC 60.597 60.000 0.00 0.00 40.52 4.40
2554 3099 4.469586 TGCATCATCTCAAGTTACCTACCA 59.530 41.667 0.00 0.00 0.00 3.25
2561 3106 6.446781 TCTCAAGTTACCTACCACTAATCG 57.553 41.667 0.00 0.00 0.00 3.34
2604 3149 3.127533 GCGGATGTGTGGTCCTGC 61.128 66.667 0.00 0.00 33.46 4.85
2628 3173 5.220472 CGGAGTGACACTTTATGTTATGCTG 60.220 44.000 10.01 0.00 43.56 4.41
2721 3269 6.475504 TCTGAGCCATCTTAATTTCTTGACA 58.524 36.000 0.00 0.00 0.00 3.58
2729 3277 7.914346 CCATCTTAATTTCTTGACAATCTCTGC 59.086 37.037 0.00 0.00 0.00 4.26
2776 3324 2.159517 CGCTTGTTTTGCCAGAGGATAC 60.160 50.000 0.00 0.00 0.00 2.24
2818 3366 2.731451 CCCGATTACGTGCACATATCTG 59.269 50.000 18.64 11.45 37.88 2.90
2853 3401 4.857871 TCTTATCGCCAAGATTTTCGTG 57.142 40.909 0.00 0.00 40.66 4.35
2970 3527 2.425143 TGCAGAGAATCACAATCCCC 57.575 50.000 0.00 0.00 37.82 4.81
3003 3560 3.347216 CCATCCGTGGTTCTTGAAGAAT 58.653 45.455 11.20 0.00 40.83 2.40
3027 3584 0.545171 CAGCTGACCTGGTGGATGAT 59.455 55.000 8.42 0.00 37.93 2.45
3057 3614 1.068753 CAGCCAGTATGAGGAGCCG 59.931 63.158 0.00 0.00 39.69 5.52
3156 3713 2.027625 CCAGTTCCTGAACGACGGC 61.028 63.158 0.00 0.00 45.50 5.68
3168 3725 2.893398 GACGGCCTCGACCTTGAT 59.107 61.111 0.00 0.00 40.11 2.57
3263 3871 3.845625 GGTGCAAAACCTCTCAACG 57.154 52.632 0.00 0.00 46.55 4.10
3264 3872 1.305201 GGTGCAAAACCTCTCAACGA 58.695 50.000 0.00 0.00 46.55 3.85
3265 3873 1.673920 GGTGCAAAACCTCTCAACGAA 59.326 47.619 0.00 0.00 46.55 3.85
3266 3874 2.287009 GGTGCAAAACCTCTCAACGAAG 60.287 50.000 0.00 0.00 46.55 3.79
3267 3875 1.333619 TGCAAAACCTCTCAACGAAGC 59.666 47.619 0.00 0.00 0.00 3.86
3268 3876 1.333619 GCAAAACCTCTCAACGAAGCA 59.666 47.619 0.00 0.00 0.00 3.91
3269 3877 2.603173 GCAAAACCTCTCAACGAAGCAG 60.603 50.000 0.00 0.00 0.00 4.24
3270 3878 1.230324 AAACCTCTCAACGAAGCAGC 58.770 50.000 0.00 0.00 0.00 5.25
3271 3879 0.394565 AACCTCTCAACGAAGCAGCT 59.605 50.000 0.00 0.00 0.00 4.24
3272 3880 1.257743 ACCTCTCAACGAAGCAGCTA 58.742 50.000 0.00 0.00 0.00 3.32
3273 3881 1.827969 ACCTCTCAACGAAGCAGCTAT 59.172 47.619 0.00 0.00 0.00 2.97
3274 3882 2.234908 ACCTCTCAACGAAGCAGCTATT 59.765 45.455 0.00 0.00 0.00 1.73
3275 3883 2.863137 CCTCTCAACGAAGCAGCTATTC 59.137 50.000 0.00 0.00 0.00 1.75
3276 3884 3.430098 CCTCTCAACGAAGCAGCTATTCT 60.430 47.826 0.00 0.00 0.00 2.40
3277 3885 4.202060 CCTCTCAACGAAGCAGCTATTCTA 60.202 45.833 0.00 0.00 0.00 2.10
3278 3886 5.508825 CCTCTCAACGAAGCAGCTATTCTAT 60.509 44.000 0.00 0.00 0.00 1.98
3279 3887 6.294231 CCTCTCAACGAAGCAGCTATTCTATA 60.294 42.308 0.00 0.00 0.00 1.31
3280 3888 7.039313 TCTCAACGAAGCAGCTATTCTATAA 57.961 36.000 0.00 0.00 0.00 0.98
3281 3889 7.142021 TCTCAACGAAGCAGCTATTCTATAAG 58.858 38.462 0.00 3.13 0.00 1.73
3282 3890 6.806751 TCAACGAAGCAGCTATTCTATAAGT 58.193 36.000 0.00 0.00 0.00 2.24
3283 3891 7.265673 TCAACGAAGCAGCTATTCTATAAGTT 58.734 34.615 0.00 3.47 0.00 2.66
3284 3892 7.222805 TCAACGAAGCAGCTATTCTATAAGTTG 59.777 37.037 15.13 15.13 35.47 3.16
3285 3893 6.806751 ACGAAGCAGCTATTCTATAAGTTGA 58.193 36.000 0.00 0.00 0.00 3.18
3286 3894 6.697892 ACGAAGCAGCTATTCTATAAGTTGAC 59.302 38.462 0.00 0.00 0.00 3.18
3287 3895 6.144724 CGAAGCAGCTATTCTATAAGTTGACC 59.855 42.308 0.00 0.00 0.00 4.02
3288 3896 5.533482 AGCAGCTATTCTATAAGTTGACCG 58.467 41.667 0.00 0.00 0.00 4.79
3289 3897 5.069251 AGCAGCTATTCTATAAGTTGACCGT 59.931 40.000 0.00 0.00 0.00 4.83
3290 3898 6.264744 AGCAGCTATTCTATAAGTTGACCGTA 59.735 38.462 0.00 0.00 0.00 4.02
3291 3899 6.921857 GCAGCTATTCTATAAGTTGACCGTAA 59.078 38.462 0.00 0.00 0.00 3.18
3292 3900 7.115095 GCAGCTATTCTATAAGTTGACCGTAAG 59.885 40.741 0.00 0.00 0.00 2.34
3293 3901 8.350722 CAGCTATTCTATAAGTTGACCGTAAGA 58.649 37.037 0.00 0.00 43.02 2.10
3294 3902 9.080097 AGCTATTCTATAAGTTGACCGTAAGAT 57.920 33.333 0.00 0.00 43.02 2.40
3295 3903 9.130312 GCTATTCTATAAGTTGACCGTAAGATG 57.870 37.037 0.00 0.00 43.02 2.90
3296 3904 7.948278 ATTCTATAAGTTGACCGTAAGATGC 57.052 36.000 0.00 0.00 43.02 3.91
3297 3905 5.839621 TCTATAAGTTGACCGTAAGATGCC 58.160 41.667 0.00 0.00 43.02 4.40
3298 3906 2.851263 AAGTTGACCGTAAGATGCCA 57.149 45.000 0.00 0.00 43.02 4.92
3299 3907 2.851263 AGTTGACCGTAAGATGCCAA 57.149 45.000 0.00 0.00 43.02 4.52
3300 3908 2.699954 AGTTGACCGTAAGATGCCAAG 58.300 47.619 0.00 0.00 43.02 3.61
3301 3909 2.301870 AGTTGACCGTAAGATGCCAAGA 59.698 45.455 0.00 0.00 43.02 3.02
3302 3910 3.055094 AGTTGACCGTAAGATGCCAAGAT 60.055 43.478 0.00 0.00 43.02 2.40
3303 3911 4.161565 AGTTGACCGTAAGATGCCAAGATA 59.838 41.667 0.00 0.00 43.02 1.98
3304 3912 4.054780 TGACCGTAAGATGCCAAGATAC 57.945 45.455 0.00 0.00 43.02 2.24
3305 3913 3.704566 TGACCGTAAGATGCCAAGATACT 59.295 43.478 0.00 0.00 43.02 2.12
3306 3914 4.202121 TGACCGTAAGATGCCAAGATACTC 60.202 45.833 0.00 0.00 43.02 2.59
3307 3915 3.243434 ACCGTAAGATGCCAAGATACTCG 60.243 47.826 0.00 0.00 43.02 4.18
3308 3916 3.004419 CCGTAAGATGCCAAGATACTCGA 59.996 47.826 0.00 0.00 43.02 4.04
3309 3917 4.222886 CGTAAGATGCCAAGATACTCGAG 58.777 47.826 11.84 11.84 43.02 4.04
3310 3918 4.023963 CGTAAGATGCCAAGATACTCGAGA 60.024 45.833 21.68 2.92 43.02 4.04
3311 3919 4.314740 AAGATGCCAAGATACTCGAGAC 57.685 45.455 21.68 9.99 0.00 3.36
3312 3920 3.291584 AGATGCCAAGATACTCGAGACA 58.708 45.455 21.68 6.70 0.00 3.41
3313 3921 2.941453 TGCCAAGATACTCGAGACAC 57.059 50.000 21.68 9.26 0.00 3.67
3314 3922 2.447443 TGCCAAGATACTCGAGACACT 58.553 47.619 21.68 11.44 0.00 3.55
3315 3923 2.423892 TGCCAAGATACTCGAGACACTC 59.576 50.000 21.68 9.54 0.00 3.51
3316 3924 2.423892 GCCAAGATACTCGAGACACTCA 59.576 50.000 21.68 0.00 0.00 3.41
3317 3925 3.488384 GCCAAGATACTCGAGACACTCAG 60.488 52.174 21.68 9.98 0.00 3.35
3318 3926 3.942115 CCAAGATACTCGAGACACTCAGA 59.058 47.826 21.68 0.00 0.00 3.27
3319 3927 4.396478 CCAAGATACTCGAGACACTCAGAA 59.604 45.833 21.68 0.00 0.00 3.02
3320 3928 5.448496 CCAAGATACTCGAGACACTCAGAAG 60.448 48.000 21.68 0.00 0.00 2.85
3325 3933 2.155279 TCGAGACACTCAGAAGTCAGG 58.845 52.381 5.12 0.00 37.23 3.86
3399 4010 3.504906 TGTAGTTGGTCTCTGTACTTCCG 59.495 47.826 0.00 0.00 0.00 4.30
3467 4081 3.624861 CCAATGCTGTGTTGACTATCTCC 59.375 47.826 0.00 0.00 0.00 3.71
3502 4116 3.967987 ACTGGTAGATCATCTGTAACCCC 59.032 47.826 0.00 0.00 0.00 4.95
3503 4117 2.963101 TGGTAGATCATCTGTAACCCCG 59.037 50.000 0.00 0.00 0.00 5.73
3504 4118 2.963782 GGTAGATCATCTGTAACCCCGT 59.036 50.000 0.00 0.00 0.00 5.28
3558 4172 6.992063 ATGTGTTGTAGGCAAATAAGAGAG 57.008 37.500 0.00 0.00 36.22 3.20
3580 4194 5.844004 AGACTACAGTTTGATCAGTTTCGT 58.156 37.500 0.00 0.00 0.00 3.85
3581 4195 6.281405 AGACTACAGTTTGATCAGTTTCGTT 58.719 36.000 0.00 0.00 0.00 3.85
3582 4196 6.761714 AGACTACAGTTTGATCAGTTTCGTTT 59.238 34.615 0.00 0.00 0.00 3.60
3583 4197 6.715464 ACTACAGTTTGATCAGTTTCGTTTG 58.285 36.000 0.00 0.00 0.00 2.93
3584 4198 4.351192 ACAGTTTGATCAGTTTCGTTTGC 58.649 39.130 0.00 0.00 0.00 3.68
3585 4199 4.096382 ACAGTTTGATCAGTTTCGTTTGCT 59.904 37.500 0.00 0.00 0.00 3.91
3586 4200 4.438797 CAGTTTGATCAGTTTCGTTTGCTG 59.561 41.667 0.00 0.00 0.00 4.41
3587 4201 2.686558 TGATCAGTTTCGTTTGCTGC 57.313 45.000 0.00 0.00 0.00 5.25
3588 4202 1.266718 TGATCAGTTTCGTTTGCTGCC 59.733 47.619 0.00 0.00 0.00 4.85
3589 4203 1.537202 GATCAGTTTCGTTTGCTGCCT 59.463 47.619 0.00 0.00 0.00 4.75
3590 4204 0.662619 TCAGTTTCGTTTGCTGCCTG 59.337 50.000 0.00 0.00 0.00 4.85
3591 4205 0.936297 CAGTTTCGTTTGCTGCCTGC 60.936 55.000 0.00 0.00 43.25 4.85
3592 4206 1.661509 GTTTCGTTTGCTGCCTGCC 60.662 57.895 0.00 0.00 42.00 4.85
3593 4207 2.124060 TTTCGTTTGCTGCCTGCCA 61.124 52.632 0.00 0.00 42.00 4.92
3594 4208 1.462731 TTTCGTTTGCTGCCTGCCAT 61.463 50.000 0.00 0.00 42.00 4.40
3595 4209 1.462731 TTCGTTTGCTGCCTGCCATT 61.463 50.000 0.00 0.00 42.00 3.16
3596 4210 1.005867 CGTTTGCTGCCTGCCATTT 60.006 52.632 0.00 0.00 42.00 2.32
3597 4211 1.010419 CGTTTGCTGCCTGCCATTTC 61.010 55.000 0.00 0.00 42.00 2.17
3598 4212 0.671472 GTTTGCTGCCTGCCATTTCC 60.671 55.000 0.00 0.00 42.00 3.13
3599 4213 1.120184 TTTGCTGCCTGCCATTTCCA 61.120 50.000 0.00 0.00 42.00 3.53
3600 4214 1.537814 TTGCTGCCTGCCATTTCCAG 61.538 55.000 0.00 0.00 42.00 3.86
3601 4215 2.890371 CTGCCTGCCATTTCCAGC 59.110 61.111 0.00 0.00 0.00 4.85
3602 4216 1.980232 CTGCCTGCCATTTCCAGCA 60.980 57.895 0.00 0.00 37.46 4.41
3603 4217 1.305465 TGCCTGCCATTTCCAGCAT 60.305 52.632 0.00 0.00 38.56 3.79
3604 4218 1.324740 TGCCTGCCATTTCCAGCATC 61.325 55.000 0.00 0.00 38.56 3.91
3605 4219 1.041447 GCCTGCCATTTCCAGCATCT 61.041 55.000 0.00 0.00 38.56 2.90
3606 4220 1.481871 CCTGCCATTTCCAGCATCTT 58.518 50.000 0.00 0.00 38.56 2.40
3607 4221 1.136305 CCTGCCATTTCCAGCATCTTG 59.864 52.381 0.00 0.00 38.56 3.02
3608 4222 1.822990 CTGCCATTTCCAGCATCTTGT 59.177 47.619 0.00 0.00 38.56 3.16
3609 4223 1.546923 TGCCATTTCCAGCATCTTGTG 59.453 47.619 0.00 0.00 33.08 3.33
3610 4224 1.134907 GCCATTTCCAGCATCTTGTGG 60.135 52.381 0.00 0.00 34.87 4.17
3611 4225 1.479323 CCATTTCCAGCATCTTGTGGG 59.521 52.381 0.00 0.00 34.27 4.61
3612 4226 1.479323 CATTTCCAGCATCTTGTGGGG 59.521 52.381 0.00 0.00 34.27 4.96
3613 4227 0.251742 TTTCCAGCATCTTGTGGGGG 60.252 55.000 0.00 0.00 34.27 5.40
3614 4228 2.757099 CCAGCATCTTGTGGGGGC 60.757 66.667 0.00 0.00 0.00 5.80
3615 4229 2.036098 CAGCATCTTGTGGGGGCA 59.964 61.111 0.00 0.00 0.00 5.36
3616 4230 1.380785 CAGCATCTTGTGGGGGCAT 60.381 57.895 0.00 0.00 0.00 4.40
3617 4231 1.380785 AGCATCTTGTGGGGGCATG 60.381 57.895 0.00 0.00 0.00 4.06
3618 4232 1.380246 GCATCTTGTGGGGGCATGA 60.380 57.895 0.00 0.00 0.00 3.07
3619 4233 1.389609 GCATCTTGTGGGGGCATGAG 61.390 60.000 0.00 0.00 0.00 2.90
3620 4234 0.033796 CATCTTGTGGGGGCATGAGT 60.034 55.000 0.00 0.00 0.00 3.41
3621 4235 0.033796 ATCTTGTGGGGGCATGAGTG 60.034 55.000 0.00 0.00 0.00 3.51
3651 4265 5.107298 CGACCTTTCAGTTCAGATGAGTTTC 60.107 44.000 0.00 0.00 0.00 2.78
3665 4279 4.818534 TGAGTTTCTGTGTTTCTGCATC 57.181 40.909 0.00 0.00 0.00 3.91
3709 4323 3.451540 TGTATCCATTTACGTGCAGGGTA 59.548 43.478 11.67 2.28 0.00 3.69
3739 4374 8.930760 GGTGTTGAGATATGCACTCTATTATTC 58.069 37.037 4.63 0.00 35.66 1.75
3760 4395 4.052608 TCAGCAATTTTGAGTTGTGCATG 58.947 39.130 0.00 0.00 37.68 4.06
3772 4407 7.920160 TGAGTTGTGCATGTTAATATCAGAA 57.080 32.000 0.00 0.00 0.00 3.02
3801 4436 0.824109 TCGTGGGCTCATCTTACCTG 59.176 55.000 0.00 0.00 0.00 4.00
3813 4448 6.672266 TCATCTTACCTGTTGAGAAGTTCT 57.328 37.500 4.68 4.68 0.00 3.01
3828 4463 8.553459 TGAGAAGTTCTGGAGTGAATAAATTC 57.447 34.615 10.90 0.00 37.31 2.17
3856 4491 4.096081 CCATTGTGGAATCTTTCTCTCTGC 59.904 45.833 0.00 0.00 40.96 4.26
3857 4492 4.356405 TTGTGGAATCTTTCTCTCTGCA 57.644 40.909 0.00 0.00 0.00 4.41
3858 4493 4.564782 TGTGGAATCTTTCTCTCTGCAT 57.435 40.909 0.00 0.00 0.00 3.96
3859 4494 4.511527 TGTGGAATCTTTCTCTCTGCATC 58.488 43.478 0.00 0.00 0.00 3.91
3863 4498 5.189342 TGGAATCTTTCTCTCTGCATCTCTT 59.811 40.000 0.00 0.00 0.00 2.85
3868 4503 5.716228 TCTTTCTCTCTGCATCTCTTTCTCT 59.284 40.000 0.00 0.00 0.00 3.10
3952 4619 1.104577 GCCTCGTCAACCAAACCCAA 61.105 55.000 0.00 0.00 0.00 4.12
3953 4620 0.951558 CCTCGTCAACCAAACCCAAG 59.048 55.000 0.00 0.00 0.00 3.61
3954 4621 1.675552 CTCGTCAACCAAACCCAAGT 58.324 50.000 0.00 0.00 0.00 3.16
3955 4622 1.602377 CTCGTCAACCAAACCCAAGTC 59.398 52.381 0.00 0.00 0.00 3.01
3956 4623 0.666374 CGTCAACCAAACCCAAGTCC 59.334 55.000 0.00 0.00 0.00 3.85
3957 4624 1.749286 CGTCAACCAAACCCAAGTCCT 60.749 52.381 0.00 0.00 0.00 3.85
3958 4625 1.954382 GTCAACCAAACCCAAGTCCTC 59.046 52.381 0.00 0.00 0.00 3.71
3959 4626 1.566703 TCAACCAAACCCAAGTCCTCA 59.433 47.619 0.00 0.00 0.00 3.86
3960 4627 2.024846 TCAACCAAACCCAAGTCCTCAA 60.025 45.455 0.00 0.00 0.00 3.02
3961 4628 2.763448 CAACCAAACCCAAGTCCTCAAA 59.237 45.455 0.00 0.00 0.00 2.69
3962 4629 3.108847 ACCAAACCCAAGTCCTCAAAA 57.891 42.857 0.00 0.00 0.00 2.44
3963 4630 3.445987 ACCAAACCCAAGTCCTCAAAAA 58.554 40.909 0.00 0.00 0.00 1.94
3982 4649 5.933187 AAAAACACAAAGTCAACCAAACC 57.067 34.783 0.00 0.00 0.00 3.27
3983 4650 3.603158 AACACAAAGTCAACCAAACCC 57.397 42.857 0.00 0.00 0.00 4.11
3984 4651 2.530701 ACACAAAGTCAACCAAACCCA 58.469 42.857 0.00 0.00 0.00 4.51
3985 4652 2.900546 ACACAAAGTCAACCAAACCCAA 59.099 40.909 0.00 0.00 0.00 4.12
3986 4653 3.056179 ACACAAAGTCAACCAAACCCAAG 60.056 43.478 0.00 0.00 0.00 3.61
3987 4654 3.056179 CACAAAGTCAACCAAACCCAAGT 60.056 43.478 0.00 0.00 0.00 3.16
3988 4655 4.158764 CACAAAGTCAACCAAACCCAAGTA 59.841 41.667 0.00 0.00 0.00 2.24
3989 4656 4.773149 ACAAAGTCAACCAAACCCAAGTAA 59.227 37.500 0.00 0.00 0.00 2.24
3990 4657 5.246429 ACAAAGTCAACCAAACCCAAGTAAA 59.754 36.000 0.00 0.00 0.00 2.01
3991 4658 6.166982 CAAAGTCAACCAAACCCAAGTAAAA 58.833 36.000 0.00 0.00 0.00 1.52
3992 4659 5.333299 AGTCAACCAAACCCAAGTAAAAC 57.667 39.130 0.00 0.00 0.00 2.43
3993 4660 4.773149 AGTCAACCAAACCCAAGTAAAACA 59.227 37.500 0.00 0.00 0.00 2.83
3994 4661 5.246429 AGTCAACCAAACCCAAGTAAAACAA 59.754 36.000 0.00 0.00 0.00 2.83
3995 4662 6.070481 AGTCAACCAAACCCAAGTAAAACAAT 60.070 34.615 0.00 0.00 0.00 2.71
3996 4663 6.256975 GTCAACCAAACCCAAGTAAAACAATC 59.743 38.462 0.00 0.00 0.00 2.67
3997 4664 5.284861 ACCAAACCCAAGTAAAACAATCC 57.715 39.130 0.00 0.00 0.00 3.01
3998 4665 4.717280 ACCAAACCCAAGTAAAACAATCCA 59.283 37.500 0.00 0.00 0.00 3.41
3999 4666 5.163353 ACCAAACCCAAGTAAAACAATCCAG 60.163 40.000 0.00 0.00 0.00 3.86
4000 4667 5.069781 CCAAACCCAAGTAAAACAATCCAGA 59.930 40.000 0.00 0.00 0.00 3.86
4001 4668 6.239572 CCAAACCCAAGTAAAACAATCCAGAT 60.240 38.462 0.00 0.00 0.00 2.90
4002 4669 6.994421 AACCCAAGTAAAACAATCCAGATT 57.006 33.333 0.00 0.00 0.00 2.40
4003 4670 8.364142 CAAACCCAAGTAAAACAATCCAGATTA 58.636 33.333 0.00 0.00 0.00 1.75
4004 4671 8.485578 AACCCAAGTAAAACAATCCAGATTAA 57.514 30.769 0.00 0.00 0.00 1.40
4005 4672 7.892609 ACCCAAGTAAAACAATCCAGATTAAC 58.107 34.615 0.00 0.00 0.00 2.01
4006 4673 7.507616 ACCCAAGTAAAACAATCCAGATTAACA 59.492 33.333 0.00 0.00 0.00 2.41
4007 4674 8.364142 CCCAAGTAAAACAATCCAGATTAACAA 58.636 33.333 0.00 0.00 0.00 2.83
4008 4675 9.757227 CCAAGTAAAACAATCCAGATTAACAAA 57.243 29.630 0.00 0.00 0.00 2.83
4021 4688 9.919416 TCCAGATTAACAAAATAATCCAGATCA 57.081 29.630 0.00 0.00 41.26 2.92
4028 4695 6.963796 ACAAAATAATCCAGATCAATCTCGC 58.036 36.000 0.00 0.00 34.22 5.03
4029 4696 6.543465 ACAAAATAATCCAGATCAATCTCGCA 59.457 34.615 0.00 0.00 34.22 5.10
4030 4697 7.067372 ACAAAATAATCCAGATCAATCTCGCAA 59.933 33.333 0.00 0.00 34.22 4.85
4031 4698 7.572523 AAATAATCCAGATCAATCTCGCAAA 57.427 32.000 0.00 0.00 34.22 3.68
4032 4699 7.756395 AATAATCCAGATCAATCTCGCAAAT 57.244 32.000 0.00 0.00 34.22 2.32
4033 4700 7.756395 ATAATCCAGATCAATCTCGCAAATT 57.244 32.000 0.00 0.00 34.22 1.82
4034 4701 8.853077 ATAATCCAGATCAATCTCGCAAATTA 57.147 30.769 0.00 0.00 34.22 1.40
4035 4702 7.756395 AATCCAGATCAATCTCGCAAATTAT 57.244 32.000 0.00 0.00 34.22 1.28
4036 4703 6.549912 TCCAGATCAATCTCGCAAATTATG 57.450 37.500 0.00 0.00 34.22 1.90
4037 4704 5.049198 TCCAGATCAATCTCGCAAATTATGC 60.049 40.000 0.00 3.42 42.83 3.14
4038 4705 5.278120 CCAGATCAATCTCGCAAATTATGCA 60.278 40.000 11.42 0.00 44.98 3.96
4039 4706 6.203647 CAGATCAATCTCGCAAATTATGCAA 58.796 36.000 11.42 0.00 44.98 4.08
4040 4707 6.693978 CAGATCAATCTCGCAAATTATGCAAA 59.306 34.615 11.42 0.00 44.98 3.68
4041 4708 7.096599 CAGATCAATCTCGCAAATTATGCAAAG 60.097 37.037 11.42 8.52 44.98 2.77
4049 4716 4.806640 CAAATTATGCAAAGACCCTGGT 57.193 40.909 0.00 0.00 0.00 4.00
4050 4717 5.151297 CAAATTATGCAAAGACCCTGGTT 57.849 39.130 0.00 0.00 0.00 3.67
4051 4718 4.806640 AATTATGCAAAGACCCTGGTTG 57.193 40.909 0.00 0.00 0.00 3.77
4052 4719 3.517296 TTATGCAAAGACCCTGGTTGA 57.483 42.857 0.00 0.00 0.00 3.18
4053 4720 2.610438 ATGCAAAGACCCTGGTTGAT 57.390 45.000 0.00 0.00 0.00 2.57
4054 4721 3.737559 ATGCAAAGACCCTGGTTGATA 57.262 42.857 0.00 0.00 0.00 2.15
4055 4722 2.790433 TGCAAAGACCCTGGTTGATAC 58.210 47.619 0.00 0.00 0.00 2.24
4056 4723 2.107378 TGCAAAGACCCTGGTTGATACA 59.893 45.455 0.00 0.00 0.00 2.29
4057 4724 2.749621 GCAAAGACCCTGGTTGATACAG 59.250 50.000 0.00 0.00 35.74 2.74
4058 4725 3.810743 GCAAAGACCCTGGTTGATACAGT 60.811 47.826 0.00 0.00 34.16 3.55
4059 4726 4.564821 GCAAAGACCCTGGTTGATACAGTA 60.565 45.833 0.00 0.00 34.16 2.74
4060 4727 4.820894 AAGACCCTGGTTGATACAGTAC 57.179 45.455 0.00 0.00 34.16 2.73
4061 4728 4.062490 AGACCCTGGTTGATACAGTACT 57.938 45.455 0.00 0.00 34.16 2.73
4062 4729 4.426704 AGACCCTGGTTGATACAGTACTT 58.573 43.478 0.00 0.00 34.16 2.24
4063 4730 4.466726 AGACCCTGGTTGATACAGTACTTC 59.533 45.833 0.00 0.00 34.16 3.01
4064 4731 3.194968 ACCCTGGTTGATACAGTACTTCG 59.805 47.826 0.00 0.00 34.16 3.79
4065 4732 3.187700 CCTGGTTGATACAGTACTTCGC 58.812 50.000 0.00 0.00 34.16 4.70
4066 4733 3.119101 CCTGGTTGATACAGTACTTCGCT 60.119 47.826 0.00 0.00 34.16 4.93
4067 4734 4.097437 CCTGGTTGATACAGTACTTCGCTA 59.903 45.833 0.00 0.00 34.16 4.26
4068 4735 5.393787 CCTGGTTGATACAGTACTTCGCTAA 60.394 44.000 0.00 0.00 34.16 3.09
4069 4736 5.647589 TGGTTGATACAGTACTTCGCTAAG 58.352 41.667 0.00 0.00 38.77 2.18
4070 4737 5.416639 TGGTTGATACAGTACTTCGCTAAGA 59.583 40.000 4.78 0.00 36.50 2.10
4071 4738 6.071784 TGGTTGATACAGTACTTCGCTAAGAA 60.072 38.462 4.78 0.00 36.50 2.52
4086 4753 4.978083 CTAAGAAGCATTTGACCAGCAT 57.022 40.909 0.00 0.00 0.00 3.79
4087 4754 3.587797 AAGAAGCATTTGACCAGCATG 57.412 42.857 0.00 0.00 0.00 4.06
4102 4769 4.069300 CAGCATGGTCATCTGATGTACT 57.931 45.455 16.66 4.75 0.00 2.73
4103 4770 4.056740 CAGCATGGTCATCTGATGTACTC 58.943 47.826 16.66 6.87 0.00 2.59
4104 4771 3.070734 AGCATGGTCATCTGATGTACTCC 59.929 47.826 16.66 14.32 0.00 3.85
4105 4772 3.805108 GCATGGTCATCTGATGTACTCCC 60.805 52.174 16.66 10.52 0.00 4.30
4106 4773 3.404869 TGGTCATCTGATGTACTCCCT 57.595 47.619 16.66 0.00 0.00 4.20
4107 4774 3.724478 TGGTCATCTGATGTACTCCCTT 58.276 45.455 16.66 0.00 0.00 3.95
4108 4775 3.706594 TGGTCATCTGATGTACTCCCTTC 59.293 47.826 16.66 2.62 0.00 3.46
4109 4776 3.243569 GGTCATCTGATGTACTCCCTTCG 60.244 52.174 16.66 0.00 0.00 3.79
4110 4777 2.362397 TCATCTGATGTACTCCCTTCGC 59.638 50.000 16.66 0.00 0.00 4.70
4111 4778 1.112113 TCTGATGTACTCCCTTCGCC 58.888 55.000 0.00 0.00 0.00 5.54
4112 4779 0.105039 CTGATGTACTCCCTTCGCCC 59.895 60.000 0.00 0.00 0.00 6.13
4113 4780 1.335132 TGATGTACTCCCTTCGCCCC 61.335 60.000 0.00 0.00 0.00 5.80
4114 4781 1.306654 ATGTACTCCCTTCGCCCCA 60.307 57.895 0.00 0.00 0.00 4.96
4115 4782 0.912487 ATGTACTCCCTTCGCCCCAA 60.912 55.000 0.00 0.00 0.00 4.12
4116 4783 1.128809 TGTACTCCCTTCGCCCCAAA 61.129 55.000 0.00 0.00 0.00 3.28
4117 4784 0.037160 GTACTCCCTTCGCCCCAAAA 59.963 55.000 0.00 0.00 0.00 2.44
4118 4785 0.996583 TACTCCCTTCGCCCCAAAAT 59.003 50.000 0.00 0.00 0.00 1.82
4119 4786 0.114364 ACTCCCTTCGCCCCAAAATT 59.886 50.000 0.00 0.00 0.00 1.82
4120 4787 0.817654 CTCCCTTCGCCCCAAAATTC 59.182 55.000 0.00 0.00 0.00 2.17
4121 4788 0.407918 TCCCTTCGCCCCAAAATTCT 59.592 50.000 0.00 0.00 0.00 2.40
4122 4789 1.203125 TCCCTTCGCCCCAAAATTCTT 60.203 47.619 0.00 0.00 0.00 2.52
4123 4790 1.066929 CCCTTCGCCCCAAAATTCTTG 60.067 52.381 0.00 0.00 0.00 3.02
4124 4791 1.618343 CCTTCGCCCCAAAATTCTTGT 59.382 47.619 0.00 0.00 0.00 3.16
4125 4792 2.352715 CCTTCGCCCCAAAATTCTTGTC 60.353 50.000 0.00 0.00 0.00 3.18
4126 4793 2.286365 TCGCCCCAAAATTCTTGTCT 57.714 45.000 0.00 0.00 0.00 3.41
4127 4794 2.593026 TCGCCCCAAAATTCTTGTCTT 58.407 42.857 0.00 0.00 0.00 3.01
4128 4795 3.757270 TCGCCCCAAAATTCTTGTCTTA 58.243 40.909 0.00 0.00 0.00 2.10
4129 4796 3.756434 TCGCCCCAAAATTCTTGTCTTAG 59.244 43.478 0.00 0.00 0.00 2.18
4130 4797 3.756434 CGCCCCAAAATTCTTGTCTTAGA 59.244 43.478 0.00 0.00 0.00 2.10
4131 4798 4.399303 CGCCCCAAAATTCTTGTCTTAGAT 59.601 41.667 0.00 0.00 0.00 1.98
4132 4799 5.105756 CGCCCCAAAATTCTTGTCTTAGATT 60.106 40.000 0.00 0.00 0.00 2.40
4133 4800 6.572314 CGCCCCAAAATTCTTGTCTTAGATTT 60.572 38.462 0.00 0.00 0.00 2.17
4134 4801 6.591448 GCCCCAAAATTCTTGTCTTAGATTTG 59.409 38.462 0.00 0.00 29.84 2.32
4135 4802 7.670364 CCCCAAAATTCTTGTCTTAGATTTGT 58.330 34.615 0.00 0.00 28.79 2.83
4136 4803 7.814587 CCCCAAAATTCTTGTCTTAGATTTGTC 59.185 37.037 0.00 0.00 28.79 3.18
4137 4804 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4148 4815 9.987272 TGTCTTAGATTTGTCTACATATGGATG 57.013 33.333 7.80 0.00 39.16 3.51
4158 4825 9.807921 TTGTCTACATATGGATGTATCTAGTCA 57.192 33.333 7.80 0.00 45.42 3.41
4159 4826 9.232473 TGTCTACATATGGATGTATCTAGTCAC 57.768 37.037 7.80 0.00 45.42 3.67
4160 4827 9.232473 GTCTACATATGGATGTATCTAGTCACA 57.768 37.037 7.80 2.41 45.42 3.58
4161 4828 9.981460 TCTACATATGGATGTATCTAGTCACAT 57.019 33.333 7.80 10.46 45.42 3.21
4163 4830 8.891985 ACATATGGATGTATCTAGTCACATCT 57.108 34.615 25.12 16.04 46.67 2.90
4164 4831 9.319060 ACATATGGATGTATCTAGTCACATCTT 57.681 33.333 25.12 19.11 46.67 2.40
4167 4834 8.948401 ATGGATGTATCTAGTCACATCTTACT 57.052 34.615 25.12 13.24 46.67 2.24
4168 4835 8.171164 TGGATGTATCTAGTCACATCTTACTG 57.829 38.462 25.12 0.00 46.67 2.74
4169 4836 7.780271 TGGATGTATCTAGTCACATCTTACTGT 59.220 37.037 25.12 0.00 46.67 3.55
4170 4837 8.634444 GGATGTATCTAGTCACATCTTACTGTT 58.366 37.037 25.12 2.95 46.67 3.16
4173 4840 9.901172 TGTATCTAGTCACATCTTACTGTTAGA 57.099 33.333 0.00 0.00 0.00 2.10
4177 4844 9.901172 TCTAGTCACATCTTACTGTTAGATACA 57.099 33.333 8.80 0.00 31.32 2.29
4181 4848 8.959058 GTCACATCTTACTGTTAGATACATTCG 58.041 37.037 8.80 0.00 35.85 3.34
4182 4849 8.683615 TCACATCTTACTGTTAGATACATTCGT 58.316 33.333 8.80 0.33 35.85 3.85
4183 4850 9.946165 CACATCTTACTGTTAGATACATTCGTA 57.054 33.333 8.80 0.00 35.85 3.43
4213 4880 9.933723 AGATAAATTGAAGACAAGAATTTTGGG 57.066 29.630 0.00 0.00 39.46 4.12
4214 4881 9.927668 GATAAATTGAAGACAAGAATTTTGGGA 57.072 29.630 0.00 0.00 39.46 4.37
4215 4882 9.710900 ATAAATTGAAGACAAGAATTTTGGGAC 57.289 29.630 0.00 0.00 39.46 4.46
4216 4883 4.829064 TGAAGACAAGAATTTTGGGACG 57.171 40.909 5.68 0.00 0.00 4.79
4217 4884 3.568007 TGAAGACAAGAATTTTGGGACGG 59.432 43.478 0.00 0.00 0.00 4.79
4218 4885 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4219 4886 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4220 4887 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4221 4888 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4222 4889 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
4223 4890 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
4224 4891 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
4225 4892 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4226 4893 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
4227 4894 1.492764 TTTGGGACGGAGGGAGTATC 58.507 55.000 0.00 0.00 0.00 2.24
4228 4895 0.337082 TTGGGACGGAGGGAGTATCA 59.663 55.000 0.00 0.00 36.25 2.15
4229 4896 0.337082 TGGGACGGAGGGAGTATCAA 59.663 55.000 0.00 0.00 36.25 2.57
4230 4897 1.041437 GGGACGGAGGGAGTATCAAG 58.959 60.000 0.00 0.00 36.25 3.02
4231 4898 0.389757 GGACGGAGGGAGTATCAAGC 59.610 60.000 0.00 0.00 36.25 4.01
4232 4899 1.112113 GACGGAGGGAGTATCAAGCA 58.888 55.000 0.00 0.00 36.25 3.91
4233 4900 1.480954 GACGGAGGGAGTATCAAGCAA 59.519 52.381 0.00 0.00 36.25 3.91
4234 4901 1.207329 ACGGAGGGAGTATCAAGCAAC 59.793 52.381 0.00 0.00 36.25 4.17
4235 4902 1.482593 CGGAGGGAGTATCAAGCAACT 59.517 52.381 0.00 0.00 36.25 3.16
4236 4903 2.739932 CGGAGGGAGTATCAAGCAACTG 60.740 54.545 0.00 0.00 36.25 3.16
4237 4904 2.501723 GGAGGGAGTATCAAGCAACTGA 59.498 50.000 0.00 0.00 36.25 3.41
4238 4905 3.055094 GGAGGGAGTATCAAGCAACTGAA 60.055 47.826 0.00 0.00 36.25 3.02
4239 4906 4.565652 GGAGGGAGTATCAAGCAACTGAAA 60.566 45.833 0.00 0.00 36.25 2.69
4240 4907 4.327680 AGGGAGTATCAAGCAACTGAAAC 58.672 43.478 0.00 0.00 36.25 2.78
4241 4908 3.440522 GGGAGTATCAAGCAACTGAAACC 59.559 47.826 0.00 0.00 36.25 3.27
4242 4909 4.072131 GGAGTATCAAGCAACTGAAACCA 58.928 43.478 0.00 0.00 36.25 3.67
4243 4910 4.083271 GGAGTATCAAGCAACTGAAACCAC 60.083 45.833 0.00 0.00 36.25 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.934169 ACATTATTTGTCCGCGAAACTGTTCG 62.934 42.308 8.23 4.55 46.74 3.95
4 5 2.681152 ATTTGTCCGCGAAACTGTTC 57.319 45.000 8.23 0.00 0.00 3.18
5 6 4.023536 ACATTATTTGTCCGCGAAACTGTT 60.024 37.500 8.23 0.00 30.89 3.16
6 7 3.500680 ACATTATTTGTCCGCGAAACTGT 59.499 39.130 8.23 1.96 30.89 3.55
7 8 4.078363 ACATTATTTGTCCGCGAAACTG 57.922 40.909 8.23 1.30 30.89 3.16
29 30 0.955905 ATCCAAAACCCAAACGGACG 59.044 50.000 0.00 0.00 34.64 4.79
31 32 1.240256 CGATCCAAAACCCAAACGGA 58.760 50.000 0.00 0.00 34.64 4.69
49 50 3.134458 GTCTTGATTAGGGCAATCTCCG 58.866 50.000 0.09 0.00 43.10 4.63
55 56 3.168773 GCCGTCTTGATTAGGGCAA 57.831 52.632 0.00 0.00 45.18 4.52
75 76 0.108963 TAGGTTGGGTCGGTTTGGTG 59.891 55.000 0.00 0.00 0.00 4.17
97 98 1.406898 CTCGCTGGAGCTAATGACTGA 59.593 52.381 0.00 0.00 39.32 3.41
110 111 2.279120 GATCGGCTGACTCGCTGG 60.279 66.667 0.00 0.00 36.91 4.85
155 157 2.419057 TTTCAGCAATGTGGGCGTGC 62.419 55.000 0.00 0.00 36.08 5.34
198 200 2.635443 GGTGATTTGGTGGCCCGTG 61.635 63.158 0.00 0.00 0.00 4.94
201 203 1.329913 GGATGGTGATTTGGTGGCCC 61.330 60.000 0.00 0.00 0.00 5.80
202 204 1.666209 CGGATGGTGATTTGGTGGCC 61.666 60.000 0.00 0.00 0.00 5.36
204 206 2.057137 ATCGGATGGTGATTTGGTGG 57.943 50.000 0.00 0.00 0.00 4.61
209 211 2.613026 TGCGTATCGGATGGTGATTT 57.387 45.000 0.00 0.00 0.00 2.17
210 212 2.839486 ATGCGTATCGGATGGTGATT 57.161 45.000 0.00 0.00 36.41 2.57
310 628 2.489802 GGGGAGGCTGAAAATATCTGGG 60.490 54.545 0.00 0.00 0.00 4.45
347 676 0.321653 CTGTTGTAGGACTGTGGCCC 60.322 60.000 0.00 0.00 0.00 5.80
348 677 0.685097 TCTGTTGTAGGACTGTGGCC 59.315 55.000 0.00 0.00 0.00 5.36
354 695 1.612463 GTCGGTGTCTGTTGTAGGACT 59.388 52.381 0.00 0.00 34.01 3.85
425 766 3.708734 GTGCACGTAAGCGGCGTT 61.709 61.111 9.37 0.00 40.90 4.84
651 993 0.693049 TGGTTTCTTCTCCTCCCTGC 59.307 55.000 0.00 0.00 0.00 4.85
691 1041 2.943033 GGCAGCCTTTATTTTCTCGCTA 59.057 45.455 3.29 0.00 0.00 4.26
692 1042 1.745653 GGCAGCCTTTATTTTCTCGCT 59.254 47.619 3.29 0.00 0.00 4.93
693 1043 1.531883 CGGCAGCCTTTATTTTCTCGC 60.532 52.381 10.54 0.00 0.00 5.03
694 1044 1.064060 CCGGCAGCCTTTATTTTCTCG 59.936 52.381 10.54 0.00 0.00 4.04
695 1045 1.202302 GCCGGCAGCCTTTATTTTCTC 60.202 52.381 24.80 0.00 34.35 2.87
696 1046 0.817654 GCCGGCAGCCTTTATTTTCT 59.182 50.000 24.80 0.00 34.35 2.52
697 1047 0.525455 CGCCGGCAGCCTTTATTTTC 60.525 55.000 28.98 0.00 38.78 2.29
698 1048 0.963355 TCGCCGGCAGCCTTTATTTT 60.963 50.000 28.98 0.00 38.78 1.82
756 1106 0.528684 CGTGATCTCGCCCTCCTTTC 60.529 60.000 4.00 0.00 0.00 2.62
757 1107 0.970937 TCGTGATCTCGCCCTCCTTT 60.971 55.000 12.18 0.00 0.00 3.11
758 1108 1.379977 TCGTGATCTCGCCCTCCTT 60.380 57.895 12.18 0.00 0.00 3.36
759 1109 1.826054 CTCGTGATCTCGCCCTCCT 60.826 63.158 12.18 0.00 0.00 3.69
760 1110 2.725008 CTCGTGATCTCGCCCTCC 59.275 66.667 12.18 0.00 0.00 4.30
761 1111 2.122167 ACCTCGTGATCTCGCCCTC 61.122 63.158 12.18 0.00 0.00 4.30
762 1112 2.043852 ACCTCGTGATCTCGCCCT 60.044 61.111 12.18 0.00 0.00 5.19
763 1113 2.105128 CACCTCGTGATCTCGCCC 59.895 66.667 12.18 0.00 35.23 6.13
764 1114 2.105128 CCACCTCGTGATCTCGCC 59.895 66.667 12.18 0.00 35.23 5.54
765 1115 2.105128 CCCACCTCGTGATCTCGC 59.895 66.667 12.18 0.00 35.23 5.03
766 1116 0.246635 AAACCCACCTCGTGATCTCG 59.753 55.000 10.84 10.84 35.23 4.04
806 1156 2.665603 GAGAGGGTGGTGGACTGC 59.334 66.667 0.00 0.00 0.00 4.40
807 1157 1.599606 CTCGAGAGGGTGGTGGACTG 61.600 65.000 6.58 0.00 0.00 3.51
808 1158 1.304547 CTCGAGAGGGTGGTGGACT 60.305 63.158 6.58 0.00 0.00 3.85
809 1159 2.352032 CCTCGAGAGGGTGGTGGAC 61.352 68.421 15.71 0.00 44.87 4.02
810 1160 2.037367 CCTCGAGAGGGTGGTGGA 59.963 66.667 15.71 0.00 44.87 4.02
890 1249 4.162690 ACCCCGCGATCCAAGAGC 62.163 66.667 8.23 0.00 0.00 4.09
891 1250 2.107141 GACCCCGCGATCCAAGAG 59.893 66.667 8.23 0.00 0.00 2.85
892 1251 2.682136 TGACCCCGCGATCCAAGA 60.682 61.111 8.23 0.00 0.00 3.02
893 1252 2.511600 GTGACCCCGCGATCCAAG 60.512 66.667 8.23 0.00 0.00 3.61
975 1335 1.772561 TTCCCTCCCCTCTCCCCTTT 61.773 60.000 0.00 0.00 0.00 3.11
1188 1548 6.548251 AGGAAGATGAAGAACCTAGTAGTAGC 59.452 42.308 0.00 0.00 0.00 3.58
1191 1551 5.128008 GCAGGAAGATGAAGAACCTAGTAGT 59.872 44.000 0.00 0.00 0.00 2.73
1198 1561 2.686915 CCATGCAGGAAGATGAAGAACC 59.313 50.000 0.00 0.00 41.22 3.62
1217 1593 1.266178 TCAGCTCTGATTTCGTCCCA 58.734 50.000 0.00 0.00 34.14 4.37
1242 1618 3.057386 TCAATCTGCAAATCAACATGCGT 60.057 39.130 0.00 0.00 45.47 5.24
1243 1619 3.302434 GTCAATCTGCAAATCAACATGCG 59.698 43.478 0.00 0.00 45.47 4.73
1246 1622 4.696877 TCTCGTCAATCTGCAAATCAACAT 59.303 37.500 0.00 0.00 0.00 2.71
1248 1624 4.668576 TCTCGTCAATCTGCAAATCAAC 57.331 40.909 0.00 0.00 0.00 3.18
1249 1625 4.377328 CGTTCTCGTCAATCTGCAAATCAA 60.377 41.667 0.00 0.00 0.00 2.57
1250 1626 3.123453 CGTTCTCGTCAATCTGCAAATCA 59.877 43.478 0.00 0.00 0.00 2.57
1251 1627 3.663908 CGTTCTCGTCAATCTGCAAATC 58.336 45.455 0.00 0.00 0.00 2.17
1252 1628 3.729526 CGTTCTCGTCAATCTGCAAAT 57.270 42.857 0.00 0.00 0.00 2.32
1542 1918 6.071728 GCTTGGGCGGTTAGTATAGTCTATAA 60.072 42.308 0.95 0.00 0.00 0.98
1639 2015 5.079998 AGAATCTCCCAAAAAGGAAAGGT 57.920 39.130 0.00 0.00 41.22 3.50
1640 2016 6.010219 TGTAGAATCTCCCAAAAAGGAAAGG 58.990 40.000 0.00 0.00 41.22 3.11
1651 2027 5.363005 GCCTAACTAACTGTAGAATCTCCCA 59.637 44.000 0.00 0.00 0.00 4.37
1655 2031 7.483580 AACAGCCTAACTAACTGTAGAATCT 57.516 36.000 0.00 0.00 43.63 2.40
1661 2037 4.766891 ACCGTAACAGCCTAACTAACTGTA 59.233 41.667 0.00 0.00 43.63 2.74
1836 2328 1.206072 CTGCGACAGTGAAGCAAGC 59.794 57.895 15.55 4.64 40.63 4.01
1856 2353 3.265791 GCTGTTAGCTGTAGACTGCAAT 58.734 45.455 13.16 0.00 42.33 3.56
1864 2361 8.759641 CAGAGTAAAATATGCTGTTAGCTGTAG 58.240 37.037 0.00 0.00 42.97 2.74
1866 2363 6.037610 GCAGAGTAAAATATGCTGTTAGCTGT 59.962 38.462 0.00 0.00 42.97 4.40
1871 2368 9.613428 ATGTAAGCAGAGTAAAATATGCTGTTA 57.387 29.630 0.00 0.00 46.55 2.41
1873 2370 7.467811 GCATGTAAGCAGAGTAAAATATGCTGT 60.468 37.037 0.00 0.00 46.55 4.40
1876 2373 6.145535 GGCATGTAAGCAGAGTAAAATATGC 58.854 40.000 0.00 0.00 37.68 3.14
1883 2380 5.105797 CCAATTTGGCATGTAAGCAGAGTAA 60.106 40.000 1.71 0.00 35.83 2.24
1891 2390 4.806640 AACTCCCAATTTGGCATGTAAG 57.193 40.909 10.10 3.04 35.79 2.34
1909 2408 3.199508 AGGATGTCAAGCAGAGCATAACT 59.800 43.478 0.00 0.00 0.00 2.24
1925 2424 6.231211 CACTAGGACACAAAAACTAGGATGT 58.769 40.000 0.00 0.00 37.75 3.06
1950 2453 5.782893 ATGAGCAGAGTAACAGGTAGATC 57.217 43.478 0.00 0.00 0.00 2.75
1954 2457 5.221641 ACAACAATGAGCAGAGTAACAGGTA 60.222 40.000 0.00 0.00 0.00 3.08
1963 2466 2.412455 CGCAGAACAACAATGAGCAGAG 60.412 50.000 0.00 0.00 0.00 3.35
1988 2498 0.318699 TGAAGAACCGACGACTGCAG 60.319 55.000 13.48 13.48 0.00 4.41
2017 2527 1.196127 GGTGTTCCGACGGTTGATTTC 59.804 52.381 14.79 0.00 0.00 2.17
2092 2602 8.632906 TCGTTGAAATTTTAAACCCTGGTATA 57.367 30.769 4.15 0.00 0.00 1.47
2281 2813 6.455513 CGTCACTGAGATATGCGAAATTTTGA 60.456 38.462 9.75 0.00 0.00 2.69
2289 2821 1.333931 GGACGTCACTGAGATATGCGA 59.666 52.381 18.91 0.00 0.00 5.10
2331 2868 7.264221 CAATATGTATGCACCAAGGCTTTTAA 58.736 34.615 0.00 0.00 34.04 1.52
2343 2880 3.213506 TGGAGCACCAATATGTATGCAC 58.786 45.455 0.00 2.38 43.91 4.57
2362 2899 9.965824 GAAAAGTAATATTAACATGGTCCATGG 57.034 33.333 30.96 15.97 45.16 3.66
2420 2957 4.098894 AGTGGAGAAAAATGGGCATGAAT 58.901 39.130 0.00 0.00 0.00 2.57
2458 2995 4.453136 GCAAATGGAAATGCTTCACAATGT 59.547 37.500 0.00 0.00 39.46 2.71
2481 3018 7.095899 CCGTTGGAATATATATCATGCATCTCG 60.096 40.741 0.00 0.00 0.00 4.04
2494 3031 6.720288 AGTCTAGCAGTACCGTTGGAATATAT 59.280 38.462 0.00 0.00 0.00 0.86
2503 3048 1.473278 GCAGAGTCTAGCAGTACCGTT 59.527 52.381 8.99 0.00 0.00 4.44
2505 3050 0.028242 CGCAGAGTCTAGCAGTACCG 59.972 60.000 12.88 0.00 0.00 4.02
2512 3057 1.439228 TGCCATCGCAGAGTCTAGC 59.561 57.895 0.00 0.00 43.63 3.42
2528 3073 4.220533 GGTAACTTGAGATGATGCATGC 57.779 45.455 11.82 11.82 0.00 4.06
2554 3099 5.068234 TCATCGAGGAACAAACGATTAGT 57.932 39.130 0.00 0.00 43.29 2.24
2561 3106 6.241207 TCTTCATTTCATCGAGGAACAAAC 57.759 37.500 12.77 0.00 0.00 2.93
2604 3149 4.870426 AGCATAACATAAAGTGTCACTCCG 59.130 41.667 5.82 0.00 41.14 4.63
2628 3173 2.689983 CTCAAAGGGATATGCACCAACC 59.310 50.000 0.00 0.00 0.00 3.77
2721 3269 4.754114 GTGTTCAGAACAAGAGCAGAGATT 59.246 41.667 17.83 0.00 44.16 2.40
2729 3277 4.889832 AGCTTTGTGTTCAGAACAAGAG 57.110 40.909 17.83 15.26 44.16 2.85
2776 3324 2.929531 ATCGAGTACTGCACACTCAG 57.070 50.000 18.96 13.23 42.12 3.35
2818 3366 2.663334 CGATAAGATCTCGACACTCGGC 60.663 54.545 0.00 0.00 40.88 5.54
2853 3401 1.675641 CACTGTAGCTGGGTTGCCC 60.676 63.158 0.00 0.00 45.71 5.36
2868 3416 9.367444 CGAAAATCTTGGTAATAAGTACTCACT 57.633 33.333 0.00 0.00 36.19 3.41
2970 3527 3.123804 CCACGGATGGTTTCTTATCTCG 58.876 50.000 0.00 0.00 41.64 4.04
3003 3560 1.915266 CACCAGGTCAGCTGGGAGA 60.915 63.158 26.71 0.00 45.78 3.71
3024 3581 0.179037 GGCTGCTCATGGTGCTATCA 60.179 55.000 11.66 0.00 0.00 2.15
3027 3584 1.222661 CTGGCTGCTCATGGTGCTA 59.777 57.895 11.66 1.08 0.00 3.49
3057 3614 2.467826 GCTCTGCATCGGCTGTTCC 61.468 63.158 0.00 0.00 41.91 3.62
3156 3713 0.526211 TGTCGTCATCAAGGTCGAGG 59.474 55.000 0.00 0.00 33.09 4.63
3168 3725 0.038618 CAAGGTCGTCCATGTCGTCA 60.039 55.000 0.51 0.00 35.89 4.35
3263 3871 6.144724 CGGTCAACTTATAGAATAGCTGCTTC 59.855 42.308 7.79 0.00 0.00 3.86
3264 3872 5.986135 CGGTCAACTTATAGAATAGCTGCTT 59.014 40.000 7.79 0.00 0.00 3.91
3265 3873 5.069251 ACGGTCAACTTATAGAATAGCTGCT 59.931 40.000 7.57 7.57 0.00 4.24
3266 3874 5.290386 ACGGTCAACTTATAGAATAGCTGC 58.710 41.667 0.00 0.00 0.00 5.25
3267 3875 8.350722 TCTTACGGTCAACTTATAGAATAGCTG 58.649 37.037 0.00 0.00 0.00 4.24
3268 3876 8.461249 TCTTACGGTCAACTTATAGAATAGCT 57.539 34.615 0.00 0.00 0.00 3.32
3269 3877 9.130312 CATCTTACGGTCAACTTATAGAATAGC 57.870 37.037 0.00 0.00 0.00 2.97
3270 3878 9.130312 GCATCTTACGGTCAACTTATAGAATAG 57.870 37.037 0.00 0.00 0.00 1.73
3271 3879 8.086522 GGCATCTTACGGTCAACTTATAGAATA 58.913 37.037 0.00 0.00 0.00 1.75
3272 3880 6.929606 GGCATCTTACGGTCAACTTATAGAAT 59.070 38.462 0.00 0.00 0.00 2.40
3273 3881 6.127281 TGGCATCTTACGGTCAACTTATAGAA 60.127 38.462 0.00 0.00 0.00 2.10
3274 3882 5.361571 TGGCATCTTACGGTCAACTTATAGA 59.638 40.000 0.00 0.00 0.00 1.98
3275 3883 5.597806 TGGCATCTTACGGTCAACTTATAG 58.402 41.667 0.00 0.00 0.00 1.31
3276 3884 5.601583 TGGCATCTTACGGTCAACTTATA 57.398 39.130 0.00 0.00 0.00 0.98
3277 3885 4.481368 TGGCATCTTACGGTCAACTTAT 57.519 40.909 0.00 0.00 0.00 1.73
3278 3886 3.965379 TGGCATCTTACGGTCAACTTA 57.035 42.857 0.00 0.00 0.00 2.24
3279 3887 2.851263 TGGCATCTTACGGTCAACTT 57.149 45.000 0.00 0.00 0.00 2.66
3280 3888 2.301870 TCTTGGCATCTTACGGTCAACT 59.698 45.455 0.00 0.00 0.00 3.16
3281 3889 2.695359 TCTTGGCATCTTACGGTCAAC 58.305 47.619 0.00 0.00 0.00 3.18
3282 3890 3.627395 ATCTTGGCATCTTACGGTCAA 57.373 42.857 0.00 0.00 0.00 3.18
3283 3891 3.704566 AGTATCTTGGCATCTTACGGTCA 59.295 43.478 0.00 0.00 0.00 4.02
3284 3892 4.299978 GAGTATCTTGGCATCTTACGGTC 58.700 47.826 0.00 0.00 0.00 4.79
3285 3893 3.243434 CGAGTATCTTGGCATCTTACGGT 60.243 47.826 0.00 0.00 0.00 4.83
3286 3894 3.004419 TCGAGTATCTTGGCATCTTACGG 59.996 47.826 0.00 0.00 0.00 4.02
3287 3895 4.023963 TCTCGAGTATCTTGGCATCTTACG 60.024 45.833 13.13 0.00 0.00 3.18
3288 3896 5.216648 GTCTCGAGTATCTTGGCATCTTAC 58.783 45.833 13.13 0.00 0.00 2.34
3289 3897 4.887655 TGTCTCGAGTATCTTGGCATCTTA 59.112 41.667 13.13 0.00 0.00 2.10
3290 3898 3.701542 TGTCTCGAGTATCTTGGCATCTT 59.298 43.478 13.13 0.00 0.00 2.40
3291 3899 3.067461 GTGTCTCGAGTATCTTGGCATCT 59.933 47.826 13.13 0.00 0.00 2.90
3292 3900 3.067461 AGTGTCTCGAGTATCTTGGCATC 59.933 47.826 13.13 0.00 0.00 3.91
3293 3901 3.027412 AGTGTCTCGAGTATCTTGGCAT 58.973 45.455 13.13 0.00 0.00 4.40
3294 3902 2.423892 GAGTGTCTCGAGTATCTTGGCA 59.576 50.000 13.13 0.00 0.00 4.92
3295 3903 2.423892 TGAGTGTCTCGAGTATCTTGGC 59.576 50.000 13.13 0.00 32.35 4.52
3296 3904 3.942115 TCTGAGTGTCTCGAGTATCTTGG 59.058 47.826 13.13 6.39 32.35 3.61
3297 3905 5.123186 ACTTCTGAGTGTCTCGAGTATCTTG 59.877 44.000 13.13 6.69 33.99 3.02
3298 3906 5.250200 ACTTCTGAGTGTCTCGAGTATCTT 58.750 41.667 13.13 0.00 33.99 2.40
3299 3907 4.839121 ACTTCTGAGTGTCTCGAGTATCT 58.161 43.478 13.13 8.83 33.99 1.98
3300 3908 4.632251 TGACTTCTGAGTGTCTCGAGTATC 59.368 45.833 13.13 7.10 35.88 2.24
3301 3909 4.580868 TGACTTCTGAGTGTCTCGAGTAT 58.419 43.478 13.13 0.00 35.88 2.12
3302 3910 3.997681 CTGACTTCTGAGTGTCTCGAGTA 59.002 47.826 13.13 0.00 35.88 2.59
3303 3911 2.811431 CTGACTTCTGAGTGTCTCGAGT 59.189 50.000 13.13 0.00 35.88 4.18
3304 3912 2.161410 CCTGACTTCTGAGTGTCTCGAG 59.839 54.545 5.93 5.93 35.88 4.04
3305 3913 2.155279 CCTGACTTCTGAGTGTCTCGA 58.845 52.381 11.98 0.00 35.88 4.04
3306 3914 2.155279 TCCTGACTTCTGAGTGTCTCG 58.845 52.381 11.98 5.65 35.88 4.04
3307 3915 2.491693 CCTCCTGACTTCTGAGTGTCTC 59.508 54.545 11.98 0.00 35.88 3.36
3308 3916 2.524306 CCTCCTGACTTCTGAGTGTCT 58.476 52.381 11.98 0.00 35.88 3.41
3309 3917 1.548269 CCCTCCTGACTTCTGAGTGTC 59.452 57.143 6.11 6.11 35.88 3.67
3310 3918 1.148027 TCCCTCCTGACTTCTGAGTGT 59.852 52.381 0.00 0.00 35.88 3.55
3311 3919 1.930251 TCCCTCCTGACTTCTGAGTG 58.070 55.000 0.00 0.00 35.88 3.51
3312 3920 2.938428 ATCCCTCCTGACTTCTGAGT 57.062 50.000 0.00 0.00 39.32 3.41
3313 3921 3.230134 CCTATCCCTCCTGACTTCTGAG 58.770 54.545 0.00 0.00 0.00 3.35
3314 3922 2.091055 CCCTATCCCTCCTGACTTCTGA 60.091 54.545 0.00 0.00 0.00 3.27
3315 3923 2.324541 CCCTATCCCTCCTGACTTCTG 58.675 57.143 0.00 0.00 0.00 3.02
3316 3924 1.940957 ACCCTATCCCTCCTGACTTCT 59.059 52.381 0.00 0.00 0.00 2.85
3317 3925 2.480642 ACCCTATCCCTCCTGACTTC 57.519 55.000 0.00 0.00 0.00 3.01
3318 3926 2.090663 GGTACCCTATCCCTCCTGACTT 60.091 54.545 0.00 0.00 0.00 3.01
3319 3927 1.504221 GGTACCCTATCCCTCCTGACT 59.496 57.143 0.00 0.00 0.00 3.41
3320 3928 1.822457 CGGTACCCTATCCCTCCTGAC 60.822 61.905 6.25 0.00 0.00 3.51
3325 3933 2.273912 CCGCGGTACCCTATCCCTC 61.274 68.421 19.50 0.00 0.00 4.30
3399 4010 2.606065 GGCCAAACCGTTGTACAACATC 60.606 50.000 32.07 11.41 41.20 3.06
3467 4081 3.849911 TCTACCAGTTCTCAAATCAGCG 58.150 45.455 0.00 0.00 0.00 5.18
3558 4172 6.526566 AACGAAACTGATCAAACTGTAGTC 57.473 37.500 0.00 0.00 0.00 2.59
3583 4197 2.890371 CTGGAAATGGCAGGCAGC 59.110 61.111 1.89 0.00 44.65 5.25
3584 4198 1.327690 ATGCTGGAAATGGCAGGCAG 61.328 55.000 1.89 0.00 41.88 4.85
3585 4199 1.305465 ATGCTGGAAATGGCAGGCA 60.305 52.632 0.00 0.00 41.88 4.75
3586 4200 1.041447 AGATGCTGGAAATGGCAGGC 61.041 55.000 0.00 0.00 41.88 4.85
3587 4201 1.136305 CAAGATGCTGGAAATGGCAGG 59.864 52.381 0.00 0.00 41.88 4.85
3588 4202 1.822990 ACAAGATGCTGGAAATGGCAG 59.177 47.619 0.00 0.00 41.88 4.85
3589 4203 1.546923 CACAAGATGCTGGAAATGGCA 59.453 47.619 0.00 0.00 42.80 4.92
3590 4204 1.134907 CCACAAGATGCTGGAAATGGC 60.135 52.381 0.00 0.00 0.00 4.40
3591 4205 1.479323 CCCACAAGATGCTGGAAATGG 59.521 52.381 0.00 0.00 0.00 3.16
3592 4206 1.479323 CCCCACAAGATGCTGGAAATG 59.521 52.381 0.00 0.00 0.00 2.32
3593 4207 1.620524 CCCCCACAAGATGCTGGAAAT 60.621 52.381 0.00 0.00 0.00 2.17
3594 4208 0.251742 CCCCCACAAGATGCTGGAAA 60.252 55.000 0.00 0.00 0.00 3.13
3595 4209 1.383799 CCCCCACAAGATGCTGGAA 59.616 57.895 0.00 0.00 0.00 3.53
3596 4210 3.089838 CCCCCACAAGATGCTGGA 58.910 61.111 0.00 0.00 0.00 3.86
3597 4211 2.757099 GCCCCCACAAGATGCTGG 60.757 66.667 0.00 0.00 0.00 4.85
3598 4212 1.380785 ATGCCCCCACAAGATGCTG 60.381 57.895 0.00 0.00 0.00 4.41
3599 4213 1.380785 CATGCCCCCACAAGATGCT 60.381 57.895 0.00 0.00 0.00 3.79
3600 4214 1.380246 TCATGCCCCCACAAGATGC 60.380 57.895 0.00 0.00 0.00 3.91
3601 4215 0.033796 ACTCATGCCCCCACAAGATG 60.034 55.000 0.00 0.00 0.00 2.90
3602 4216 0.033796 CACTCATGCCCCCACAAGAT 60.034 55.000 0.00 0.00 0.00 2.40
3603 4217 1.379916 CACTCATGCCCCCACAAGA 59.620 57.895 0.00 0.00 0.00 3.02
3604 4218 2.345760 GCACTCATGCCCCCACAAG 61.346 63.158 0.00 0.00 46.97 3.16
3605 4219 2.283101 GCACTCATGCCCCCACAA 60.283 61.111 0.00 0.00 46.97 3.33
3614 4228 1.148310 AAGGTCGAAACGCACTCATG 58.852 50.000 0.00 0.00 0.00 3.07
3615 4229 1.798813 GAAAGGTCGAAACGCACTCAT 59.201 47.619 0.00 0.00 0.00 2.90
3616 4230 1.214367 GAAAGGTCGAAACGCACTCA 58.786 50.000 0.00 0.00 0.00 3.41
3617 4231 1.192534 CTGAAAGGTCGAAACGCACTC 59.807 52.381 0.00 0.00 0.00 3.51
3618 4232 1.217882 CTGAAAGGTCGAAACGCACT 58.782 50.000 0.00 0.00 0.00 4.40
3619 4233 0.935196 ACTGAAAGGTCGAAACGCAC 59.065 50.000 0.00 0.00 39.30 5.34
3620 4234 1.595794 GAACTGAAAGGTCGAAACGCA 59.404 47.619 0.00 0.00 43.22 5.24
3621 4235 2.296012 GAACTGAAAGGTCGAAACGC 57.704 50.000 0.00 0.00 43.22 4.84
3651 4265 1.229428 ACCACGATGCAGAAACACAG 58.771 50.000 0.00 0.00 0.00 3.66
3665 4279 3.935203 ACTGAATCATAGCAAGAACCACG 59.065 43.478 0.00 0.00 0.00 4.94
3709 4323 2.573462 AGTGCATATCTCAACACCTGGT 59.427 45.455 0.00 0.00 33.46 4.00
3739 4374 3.805422 ACATGCACAACTCAAAATTGCTG 59.195 39.130 0.00 0.00 34.18 4.41
3760 4395 9.964253 CACGATATGCTGAATTCTGATATTAAC 57.036 33.333 15.79 0.00 0.00 2.01
3772 4407 1.417517 TGAGCCCACGATATGCTGAAT 59.582 47.619 0.00 0.00 34.99 2.57
3801 4436 7.730364 TTTATTCACTCCAGAACTTCTCAAC 57.270 36.000 0.00 0.00 0.00 3.18
3813 4448 7.451255 ACAATGGTTCAGAATTTATTCACTCCA 59.549 33.333 5.36 7.76 39.23 3.86
3828 4463 5.709164 AGAGAAAGATTCCACAATGGTTCAG 59.291 40.000 0.00 0.00 39.03 3.02
3960 4627 4.757657 GGGTTTGGTTGACTTTGTGTTTTT 59.242 37.500 0.00 0.00 0.00 1.94
3961 4628 4.202367 TGGGTTTGGTTGACTTTGTGTTTT 60.202 37.500 0.00 0.00 0.00 2.43
3962 4629 3.325135 TGGGTTTGGTTGACTTTGTGTTT 59.675 39.130 0.00 0.00 0.00 2.83
3963 4630 2.900546 TGGGTTTGGTTGACTTTGTGTT 59.099 40.909 0.00 0.00 0.00 3.32
3964 4631 2.530701 TGGGTTTGGTTGACTTTGTGT 58.469 42.857 0.00 0.00 0.00 3.72
3965 4632 3.056179 ACTTGGGTTTGGTTGACTTTGTG 60.056 43.478 0.00 0.00 0.00 3.33
3966 4633 3.169908 ACTTGGGTTTGGTTGACTTTGT 58.830 40.909 0.00 0.00 0.00 2.83
3967 4634 3.885724 ACTTGGGTTTGGTTGACTTTG 57.114 42.857 0.00 0.00 0.00 2.77
3968 4635 6.167685 GTTTTACTTGGGTTTGGTTGACTTT 58.832 36.000 0.00 0.00 0.00 2.66
3969 4636 5.246429 TGTTTTACTTGGGTTTGGTTGACTT 59.754 36.000 0.00 0.00 0.00 3.01
3970 4637 4.773149 TGTTTTACTTGGGTTTGGTTGACT 59.227 37.500 0.00 0.00 0.00 3.41
3971 4638 5.074584 TGTTTTACTTGGGTTTGGTTGAC 57.925 39.130 0.00 0.00 0.00 3.18
3972 4639 5.740290 TTGTTTTACTTGGGTTTGGTTGA 57.260 34.783 0.00 0.00 0.00 3.18
3973 4640 5.525745 GGATTGTTTTACTTGGGTTTGGTTG 59.474 40.000 0.00 0.00 0.00 3.77
3974 4641 5.189934 TGGATTGTTTTACTTGGGTTTGGTT 59.810 36.000 0.00 0.00 0.00 3.67
3975 4642 4.717280 TGGATTGTTTTACTTGGGTTTGGT 59.283 37.500 0.00 0.00 0.00 3.67
3976 4643 5.069781 TCTGGATTGTTTTACTTGGGTTTGG 59.930 40.000 0.00 0.00 0.00 3.28
3977 4644 6.155475 TCTGGATTGTTTTACTTGGGTTTG 57.845 37.500 0.00 0.00 0.00 2.93
3978 4645 6.994421 ATCTGGATTGTTTTACTTGGGTTT 57.006 33.333 0.00 0.00 0.00 3.27
3979 4646 6.994421 AATCTGGATTGTTTTACTTGGGTT 57.006 33.333 0.00 0.00 0.00 4.11
3980 4647 7.507616 TGTTAATCTGGATTGTTTTACTTGGGT 59.492 33.333 6.13 0.00 32.50 4.51
3981 4648 7.891561 TGTTAATCTGGATTGTTTTACTTGGG 58.108 34.615 6.13 0.00 32.50 4.12
3982 4649 9.757227 TTTGTTAATCTGGATTGTTTTACTTGG 57.243 29.630 6.13 0.00 32.50 3.61
3995 4662 9.919416 TGATCTGGATTATTTTGTTAATCTGGA 57.081 29.630 0.00 4.26 38.23 3.86
4002 4669 8.559536 GCGAGATTGATCTGGATTATTTTGTTA 58.440 33.333 7.13 0.00 37.25 2.41
4003 4670 7.067372 TGCGAGATTGATCTGGATTATTTTGTT 59.933 33.333 7.13 0.00 37.25 2.83
4004 4671 6.543465 TGCGAGATTGATCTGGATTATTTTGT 59.457 34.615 7.13 0.00 37.25 2.83
4005 4672 6.962686 TGCGAGATTGATCTGGATTATTTTG 58.037 36.000 7.13 0.00 37.25 2.44
4006 4673 7.572523 TTGCGAGATTGATCTGGATTATTTT 57.427 32.000 7.13 0.00 37.25 1.82
4007 4674 7.572523 TTTGCGAGATTGATCTGGATTATTT 57.427 32.000 7.13 0.00 37.25 1.40
4008 4675 7.756395 ATTTGCGAGATTGATCTGGATTATT 57.244 32.000 7.13 0.00 37.25 1.40
4009 4676 7.756395 AATTTGCGAGATTGATCTGGATTAT 57.244 32.000 7.13 0.00 37.25 1.28
4010 4677 8.724229 CATAATTTGCGAGATTGATCTGGATTA 58.276 33.333 7.13 3.66 37.25 1.75
4011 4678 7.591165 CATAATTTGCGAGATTGATCTGGATT 58.409 34.615 7.13 1.87 37.25 3.01
4012 4679 6.349115 GCATAATTTGCGAGATTGATCTGGAT 60.349 38.462 7.13 0.00 42.54 3.41
4013 4680 5.049198 GCATAATTTGCGAGATTGATCTGGA 60.049 40.000 7.13 0.00 42.54 3.86
4014 4681 5.152097 GCATAATTTGCGAGATTGATCTGG 58.848 41.667 0.00 0.00 42.54 3.86
4028 4695 4.806640 ACCAGGGTCTTTGCATAATTTG 57.193 40.909 0.00 0.00 0.00 2.32
4029 4696 4.837860 TCAACCAGGGTCTTTGCATAATTT 59.162 37.500 0.00 0.00 0.00 1.82
4030 4697 4.415596 TCAACCAGGGTCTTTGCATAATT 58.584 39.130 0.00 0.00 0.00 1.40
4031 4698 4.046286 TCAACCAGGGTCTTTGCATAAT 57.954 40.909 0.00 0.00 0.00 1.28
4032 4699 3.517296 TCAACCAGGGTCTTTGCATAA 57.483 42.857 0.00 0.00 0.00 1.90
4033 4700 3.737559 ATCAACCAGGGTCTTTGCATA 57.262 42.857 0.00 0.00 0.00 3.14
4034 4701 2.610438 ATCAACCAGGGTCTTTGCAT 57.390 45.000 0.00 0.00 0.00 3.96
4035 4702 2.107378 TGTATCAACCAGGGTCTTTGCA 59.893 45.455 0.00 0.00 0.00 4.08
4036 4703 2.749621 CTGTATCAACCAGGGTCTTTGC 59.250 50.000 0.00 0.00 0.00 3.68
4037 4704 4.021102 ACTGTATCAACCAGGGTCTTTG 57.979 45.455 0.00 0.00 34.16 2.77
4038 4705 4.844655 AGTACTGTATCAACCAGGGTCTTT 59.155 41.667 0.00 0.00 34.16 2.52
4039 4706 4.426704 AGTACTGTATCAACCAGGGTCTT 58.573 43.478 0.00 0.00 34.16 3.01
4040 4707 4.062490 AGTACTGTATCAACCAGGGTCT 57.938 45.455 0.00 0.00 34.16 3.85
4041 4708 4.677250 CGAAGTACTGTATCAACCAGGGTC 60.677 50.000 0.00 0.00 34.16 4.46
4042 4709 3.194968 CGAAGTACTGTATCAACCAGGGT 59.805 47.826 0.00 0.00 34.16 4.34
4043 4710 3.782046 CGAAGTACTGTATCAACCAGGG 58.218 50.000 0.00 0.00 34.16 4.45
4044 4711 3.119101 AGCGAAGTACTGTATCAACCAGG 60.119 47.826 0.00 0.00 34.16 4.45
4045 4712 4.111375 AGCGAAGTACTGTATCAACCAG 57.889 45.455 0.00 0.00 36.01 4.00
4046 4713 5.416639 TCTTAGCGAAGTACTGTATCAACCA 59.583 40.000 6.46 0.00 34.03 3.67
4047 4714 5.888105 TCTTAGCGAAGTACTGTATCAACC 58.112 41.667 6.46 0.00 34.03 3.77
4048 4715 7.439204 CTTCTTAGCGAAGTACTGTATCAAC 57.561 40.000 6.46 0.00 43.35 3.18
4064 4731 7.894505 CCATGCTGGTCAAATGCTTCTTAGC 62.895 48.000 0.00 0.00 39.26 3.09
4065 4732 4.439700 CCATGCTGGTCAAATGCTTCTTAG 60.440 45.833 0.00 0.00 31.35 2.18
4066 4733 3.444742 CCATGCTGGTCAAATGCTTCTTA 59.555 43.478 0.00 0.00 31.35 2.10
4067 4734 2.232941 CCATGCTGGTCAAATGCTTCTT 59.767 45.455 0.00 0.00 31.35 2.52
4068 4735 1.822990 CCATGCTGGTCAAATGCTTCT 59.177 47.619 0.00 0.00 31.35 2.85
4069 4736 2.288961 CCATGCTGGTCAAATGCTTC 57.711 50.000 0.00 0.00 31.35 3.86
4080 4747 2.343484 ACATCAGATGACCATGCTGG 57.657 50.000 17.81 1.16 45.02 4.85
4081 4748 4.056740 GAGTACATCAGATGACCATGCTG 58.943 47.826 17.81 0.00 0.00 4.41
4082 4749 3.070734 GGAGTACATCAGATGACCATGCT 59.929 47.826 17.81 3.31 0.00 3.79
4083 4750 3.397482 GGAGTACATCAGATGACCATGC 58.603 50.000 17.81 0.00 0.00 4.06
4084 4751 3.645212 AGGGAGTACATCAGATGACCATG 59.355 47.826 17.81 0.00 0.00 3.66
4085 4752 3.933886 AGGGAGTACATCAGATGACCAT 58.066 45.455 17.81 9.17 0.00 3.55
4086 4753 3.404869 AGGGAGTACATCAGATGACCA 57.595 47.619 17.81 0.00 0.00 4.02
4087 4754 3.243569 CGAAGGGAGTACATCAGATGACC 60.244 52.174 17.81 13.05 0.00 4.02
4088 4755 3.797184 GCGAAGGGAGTACATCAGATGAC 60.797 52.174 17.81 10.50 0.00 3.06
4089 4756 2.362397 GCGAAGGGAGTACATCAGATGA 59.638 50.000 17.81 0.00 0.00 2.92
4090 4757 2.546795 GGCGAAGGGAGTACATCAGATG 60.547 54.545 9.03 9.03 0.00 2.90
4091 4758 1.689273 GGCGAAGGGAGTACATCAGAT 59.311 52.381 0.00 0.00 0.00 2.90
4092 4759 1.112113 GGCGAAGGGAGTACATCAGA 58.888 55.000 0.00 0.00 0.00 3.27
4093 4760 0.105039 GGGCGAAGGGAGTACATCAG 59.895 60.000 0.00 0.00 0.00 2.90
4094 4761 1.335132 GGGGCGAAGGGAGTACATCA 61.335 60.000 0.00 0.00 0.00 3.07
4095 4762 1.335132 TGGGGCGAAGGGAGTACATC 61.335 60.000 0.00 0.00 0.00 3.06
4096 4763 0.912487 TTGGGGCGAAGGGAGTACAT 60.912 55.000 0.00 0.00 0.00 2.29
4097 4764 1.128809 TTTGGGGCGAAGGGAGTACA 61.129 55.000 0.00 0.00 0.00 2.90
4098 4765 0.037160 TTTTGGGGCGAAGGGAGTAC 59.963 55.000 0.00 0.00 0.00 2.73
4099 4766 0.996583 ATTTTGGGGCGAAGGGAGTA 59.003 50.000 0.00 0.00 0.00 2.59
4100 4767 0.114364 AATTTTGGGGCGAAGGGAGT 59.886 50.000 0.00 0.00 0.00 3.85
4101 4768 0.817654 GAATTTTGGGGCGAAGGGAG 59.182 55.000 0.00 0.00 0.00 4.30
4102 4769 0.407918 AGAATTTTGGGGCGAAGGGA 59.592 50.000 0.00 0.00 0.00 4.20
4103 4770 1.066929 CAAGAATTTTGGGGCGAAGGG 60.067 52.381 0.00 0.00 0.00 3.95
4104 4771 1.618343 ACAAGAATTTTGGGGCGAAGG 59.382 47.619 0.00 0.00 0.00 3.46
4105 4772 2.558359 AGACAAGAATTTTGGGGCGAAG 59.442 45.455 0.00 0.00 0.00 3.79
4106 4773 2.593026 AGACAAGAATTTTGGGGCGAA 58.407 42.857 0.00 0.00 0.00 4.70
4107 4774 2.286365 AGACAAGAATTTTGGGGCGA 57.714 45.000 0.00 0.00 0.00 5.54
4108 4775 3.756434 TCTAAGACAAGAATTTTGGGGCG 59.244 43.478 5.68 0.00 0.00 6.13
4109 4776 5.921962 ATCTAAGACAAGAATTTTGGGGC 57.078 39.130 5.68 0.00 0.00 5.80
4110 4777 7.670364 ACAAATCTAAGACAAGAATTTTGGGG 58.330 34.615 0.00 0.00 33.04 4.96
4111 4778 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
4122 4789 9.987272 CATCCATATGTAGACAAATCTAAGACA 57.013 33.333 1.24 0.00 39.20 3.41
4123 4790 9.988815 ACATCCATATGTAGACAAATCTAAGAC 57.011 33.333 1.24 0.00 44.66 3.01
4147 4814 9.901172 TCTAACAGTAAGATGTGACTAGATACA 57.099 33.333 0.00 1.16 32.52 2.29
4151 4818 9.901172 TGTATCTAACAGTAAGATGTGACTAGA 57.099 33.333 0.00 0.00 35.36 2.43
4155 4822 8.959058 CGAATGTATCTAACAGTAAGATGTGAC 58.041 37.037 0.00 0.00 42.70 3.67
4156 4823 8.683615 ACGAATGTATCTAACAGTAAGATGTGA 58.316 33.333 0.00 0.00 42.70 3.58
4157 4824 8.858003 ACGAATGTATCTAACAGTAAGATGTG 57.142 34.615 0.00 0.00 42.70 3.21
4187 4854 9.933723 CCCAAAATTCTTGTCTTCAATTTATCT 57.066 29.630 0.00 0.00 31.06 1.98
4188 4855 9.927668 TCCCAAAATTCTTGTCTTCAATTTATC 57.072 29.630 0.00 0.00 31.06 1.75
4189 4856 9.710900 GTCCCAAAATTCTTGTCTTCAATTTAT 57.289 29.630 0.00 0.00 31.06 1.40
4190 4857 7.865385 CGTCCCAAAATTCTTGTCTTCAATTTA 59.135 33.333 0.00 0.00 31.06 1.40
4191 4858 6.701400 CGTCCCAAAATTCTTGTCTTCAATTT 59.299 34.615 0.00 0.00 32.30 1.82
4192 4859 6.215845 CGTCCCAAAATTCTTGTCTTCAATT 58.784 36.000 0.00 0.00 32.82 2.32
4193 4860 5.278957 CCGTCCCAAAATTCTTGTCTTCAAT 60.279 40.000 0.00 0.00 32.82 2.57
4194 4861 4.037446 CCGTCCCAAAATTCTTGTCTTCAA 59.963 41.667 0.00 0.00 0.00 2.69
4195 4862 3.568007 CCGTCCCAAAATTCTTGTCTTCA 59.432 43.478 0.00 0.00 0.00 3.02
4196 4863 3.818773 TCCGTCCCAAAATTCTTGTCTTC 59.181 43.478 0.00 0.00 0.00 2.87
4197 4864 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4198 4865 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4199 4866 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4200 4867 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4201 4868 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4202 4869 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4203 4870 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4204 4871 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4205 4872 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4206 4873 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4207 4874 1.835531 GATACTCCCTCCGTCCCAAAA 59.164 52.381 0.00 0.00 0.00 2.44
4208 4875 1.273381 TGATACTCCCTCCGTCCCAAA 60.273 52.381 0.00 0.00 0.00 3.28
4209 4876 0.337082 TGATACTCCCTCCGTCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
4210 4877 0.337082 TTGATACTCCCTCCGTCCCA 59.663 55.000 0.00 0.00 0.00 4.37
4211 4878 1.041437 CTTGATACTCCCTCCGTCCC 58.959 60.000 0.00 0.00 0.00 4.46
4212 4879 0.389757 GCTTGATACTCCCTCCGTCC 59.610 60.000 0.00 0.00 0.00 4.79
4213 4880 1.112113 TGCTTGATACTCCCTCCGTC 58.888 55.000 0.00 0.00 0.00 4.79
4214 4881 1.207329 GTTGCTTGATACTCCCTCCGT 59.793 52.381 0.00 0.00 0.00 4.69
4215 4882 1.482593 AGTTGCTTGATACTCCCTCCG 59.517 52.381 0.00 0.00 0.00 4.63
4216 4883 2.501723 TCAGTTGCTTGATACTCCCTCC 59.498 50.000 0.00 0.00 0.00 4.30
4217 4884 3.895232 TCAGTTGCTTGATACTCCCTC 57.105 47.619 0.00 0.00 0.00 4.30
4218 4885 4.327680 GTTTCAGTTGCTTGATACTCCCT 58.672 43.478 0.00 0.00 0.00 4.20
4219 4886 3.440522 GGTTTCAGTTGCTTGATACTCCC 59.559 47.826 0.00 0.00 32.03 4.30
4220 4887 4.072131 TGGTTTCAGTTGCTTGATACTCC 58.928 43.478 0.00 0.00 32.03 3.85
4221 4888 5.035784 GTGGTTTCAGTTGCTTGATACTC 57.964 43.478 0.00 0.00 32.03 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.