Multiple sequence alignment - TraesCS4B01G078200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G078200 chr4B 100.000 6847 0 0 1 6847 75200644 75207490 0.000000e+00 12645.0
1 TraesCS4B01G078200 chr4B 97.516 161 4 0 4467 4627 63754001 63753841 6.760000e-70 276.0
2 TraesCS4B01G078200 chr4B 87.379 103 9 4 3810 3910 612276344 612276444 1.560000e-21 115.0
3 TraesCS4B01G078200 chr4B 91.781 73 4 1 6771 6843 77157349 77157419 4.370000e-17 100.0
4 TraesCS4B01G078200 chr4A 89.921 2530 121 53 726 3201 545607159 545604710 0.000000e+00 3136.0
5 TraesCS4B01G078200 chr4A 96.403 1251 28 6 5081 6331 545602828 545601595 0.000000e+00 2045.0
6 TraesCS4B01G078200 chr4A 93.823 1117 42 12 3365 4465 545604535 545603430 0.000000e+00 1655.0
7 TraesCS4B01G078200 chr4A 82.923 691 66 28 2 675 545607776 545607121 5.960000e-160 575.0
8 TraesCS4B01G078200 chr4A 94.624 372 17 3 4717 5086 545603395 545603025 2.140000e-159 573.0
9 TraesCS4B01G078200 chr4A 94.805 154 7 1 3195 3348 545604672 545604520 8.880000e-59 239.0
10 TraesCS4B01G078200 chr4A 88.806 134 13 2 6641 6773 90082577 90082445 5.490000e-36 163.0
11 TraesCS4B01G078200 chr4A 87.000 100 10 3 6440 6538 545601506 545601409 7.260000e-20 110.0
12 TraesCS4B01G078200 chr4A 86.869 99 9 2 6345 6439 545601539 545601441 2.610000e-19 108.0
13 TraesCS4B01G078200 chr4A 100.000 41 0 0 6570 6610 545601319 545601279 7.360000e-10 76.8
14 TraesCS4B01G078200 chr4A 97.059 34 1 0 6449 6482 545601370 545601337 2.670000e-04 58.4
15 TraesCS4B01G078200 chr4A 96.875 32 1 0 685 716 545607141 545607110 3.000000e-03 54.7
16 TraesCS4B01G078200 chr4D 95.531 1365 40 8 5081 6439 51076343 51077692 0.000000e+00 2163.0
17 TraesCS4B01G078200 chr4D 91.002 1467 66 25 682 2141 51071531 51072938 0.000000e+00 1917.0
18 TraesCS4B01G078200 chr4D 94.270 1117 43 10 3365 4465 51074603 51075714 0.000000e+00 1688.0
19 TraesCS4B01G078200 chr4D 94.346 902 40 4 2126 3018 51073291 51074190 0.000000e+00 1373.0
20 TraesCS4B01G078200 chr4D 87.066 518 46 12 169 675 51071047 51071554 3.580000e-157 566.0
21 TraesCS4B01G078200 chr4D 94.051 353 19 2 4717 5068 51075749 51076100 1.010000e-147 534.0
22 TraesCS4B01G078200 chr4D 87.021 339 25 13 6443 6780 51077628 51077948 1.400000e-96 364.0
23 TraesCS4B01G078200 chr4D 95.213 188 8 1 3015 3201 51074243 51074430 5.190000e-76 296.0
24 TraesCS4B01G078200 chr4D 94.805 154 7 1 3195 3348 51074466 51074618 8.880000e-59 239.0
25 TraesCS4B01G078200 chr4D 97.895 95 1 1 4624 4717 51075713 51075807 5.490000e-36 163.0
26 TraesCS4B01G078200 chr4D 86.861 137 10 1 1 137 51070639 51070767 5.530000e-31 147.0
27 TraesCS4B01G078200 chr4D 89.247 93 9 1 3810 3901 482705636 482705728 1.560000e-21 115.0
28 TraesCS4B01G078200 chr4D 96.875 32 1 0 685 716 51071581 51071612 3.000000e-03 54.7
29 TraesCS4B01G078200 chr2A 81.681 464 53 19 3462 3909 772678289 772677842 2.350000e-94 357.0
30 TraesCS4B01G078200 chr2A 97.516 161 4 0 4467 4627 93411545 93411705 6.760000e-70 276.0
31 TraesCS4B01G078200 chr2A 85.577 104 14 1 3810 3912 101536270 101536167 2.610000e-19 108.0
32 TraesCS4B01G078200 chr2A 87.931 58 6 1 6469 6525 715403204 715403261 4.430000e-07 67.6
33 TraesCS4B01G078200 chr2D 81.034 464 49 20 3462 3909 647811122 647811562 3.960000e-87 333.0
34 TraesCS4B01G078200 chr2D 90.769 130 12 0 6640 6769 645152853 645152724 2.540000e-39 174.0
35 TraesCS4B01G078200 chr2D 82.301 113 11 4 3803 3914 558334798 558334694 9.460000e-14 89.8
36 TraesCS4B01G078200 chr6B 95.055 182 9 0 4467 4648 699977609 699977428 3.130000e-73 287.0
37 TraesCS4B01G078200 chr3B 96.471 170 4 2 4467 4635 169691954 169691786 5.230000e-71 279.0
38 TraesCS4B01G078200 chr3B 94.857 175 8 1 4464 4638 602591118 602591291 8.750000e-69 272.0
39 TraesCS4B01G078200 chr3B 95.833 168 7 0 4467 4634 684728373 684728206 8.750000e-69 272.0
40 TraesCS4B01G078200 chr3B 92.105 38 3 0 6480 6517 766987765 766987728 3.000000e-03 54.7
41 TraesCS4B01G078200 chr1B 96.988 166 5 0 4467 4632 450130782 450130947 5.230000e-71 279.0
42 TraesCS4B01G078200 chr1B 95.322 171 8 0 4467 4637 183877201 183877371 8.750000e-69 272.0
43 TraesCS4B01G078200 chr1B 88.321 137 14 2 6637 6773 133035332 133035198 5.490000e-36 163.0
44 TraesCS4B01G078200 chr1D 82.471 348 30 20 3441 3780 93124918 93125242 6.760000e-70 276.0
45 TraesCS4B01G078200 chr1D 96.386 166 6 0 4467 4632 427826922 427827087 2.430000e-69 274.0
46 TraesCS4B01G078200 chr1A 90.909 132 12 0 6641 6772 90725800 90725931 1.960000e-40 178.0
47 TraesCS4B01G078200 chr2B 90.299 134 10 3 6637 6769 154494361 154494492 9.130000e-39 172.0
48 TraesCS4B01G078200 chr2B 89.781 137 11 3 6637 6772 154605896 154605762 9.130000e-39 172.0
49 TraesCS4B01G078200 chr2B 86.719 128 11 2 3195 3317 391142207 391142081 3.330000e-28 137.0
50 TraesCS4B01G078200 chr2B 84.946 93 13 1 3810 3901 153761090 153760998 7.310000e-15 93.5
51 TraesCS4B01G078200 chr2B 88.312 77 7 2 6767 6842 463779114 463779189 2.630000e-14 91.6
52 TraesCS4B01G078200 chr2B 87.013 77 5 2 6771 6843 592368539 592368464 1.580000e-11 82.4
53 TraesCS4B01G078200 chr2B 90.741 54 4 1 2005 2058 73068224 73068276 3.430000e-08 71.3
54 TraesCS4B01G078200 chr2B 94.872 39 2 0 6469 6507 799515285 799515247 2.060000e-05 62.1
55 TraesCS4B01G078200 chr7A 89.683 126 13 0 6647 6772 58777389 58777264 1.980000e-35 161.0
56 TraesCS4B01G078200 chr7A 88.636 132 14 1 6641 6772 40543525 40543655 7.110000e-35 159.0
57 TraesCS4B01G078200 chr7A 92.208 77 6 0 6767 6843 721594825 721594901 7.260000e-20 110.0
58 TraesCS4B01G078200 chr7A 92.208 77 6 0 6767 6843 721664376 721664452 7.260000e-20 110.0
59 TraesCS4B01G078200 chr7A 81.818 77 8 6 1987 2058 25003248 25003323 7.420000e-05 60.2
60 TraesCS4B01G078200 chr5B 89.873 79 8 0 6769 6847 125840711 125840633 1.210000e-17 102.0
61 TraesCS4B01G078200 chr5B 97.222 36 1 0 2008 2043 688700058 688700093 2.060000e-05 62.1
62 TraesCS4B01G078200 chr7D 90.541 74 3 1 6767 6840 626054649 626054718 2.030000e-15 95.3
63 TraesCS4B01G078200 chr6A 88.889 72 7 1 6767 6837 424749045 424748974 3.400000e-13 87.9
64 TraesCS4B01G078200 chr6D 86.486 74 2 4 6774 6847 340211809 340211744 2.650000e-09 75.0
65 TraesCS4B01G078200 chr5D 97.619 42 1 0 3810 3851 244710671 244710630 9.530000e-09 73.1
66 TraesCS4B01G078200 chr7B 92.000 50 4 0 2007 2056 432932058 432932009 3.430000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G078200 chr4B 75200644 75207490 6846 False 12645.000000 12645 100.000000 1 6847 1 chr4B.!!$F1 6846
1 TraesCS4B01G078200 chr4A 545601279 545607776 6497 True 784.627273 3136 92.754727 2 6610 11 chr4A.!!$R2 6608
2 TraesCS4B01G078200 chr4D 51070639 51077948 7309 False 792.058333 2163 92.911333 1 6780 12 chr4D.!!$F2 6779

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 703 0.467384 ATCCATTCCAGGCTGAGTCG 59.533 55.000 17.94 0.00 0.00 4.18 F
548 805 0.684805 AAAACCAACCGTGCCAAGGA 60.685 50.000 2.90 0.00 0.00 3.36 F
724 991 1.004560 GTCAGCTACCAGCAGTGCA 60.005 57.895 19.20 0.00 45.56 4.57 F
725 992 1.018226 GTCAGCTACCAGCAGTGCAG 61.018 60.000 19.20 9.58 45.56 4.41 F
847 1116 1.160137 GACGAAATGCAGTCCAGCTT 58.840 50.000 0.00 0.00 34.99 3.74 F
1285 1559 1.187567 CCAGCCCACTTTTTCCCCAG 61.188 60.000 0.00 0.00 0.00 4.45 F
1454 1732 1.295423 GGTCAGCCGCCTCTGTTAA 59.705 57.895 0.54 0.00 35.63 2.01 F
3259 4029 1.135112 CCTTCCTTTGCCGGTAAATGC 60.135 52.381 18.45 0.00 0.00 3.56 F
4480 5268 0.708802 TTAGGACTCCCTCCGTTCCT 59.291 55.000 0.00 0.00 45.10 3.36 F
4483 5271 1.078324 AGGACTCCCTCCGTTCCTAAA 59.922 52.381 0.00 0.00 45.10 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1953 2241 0.250124 CCGTACCAGCCAAGTTGTGA 60.250 55.000 1.45 0.00 0.00 3.58 R
1954 2242 1.234615 CCCGTACCAGCCAAGTTGTG 61.235 60.000 1.45 0.00 0.00 3.33 R
2043 2331 2.182842 GGTCGATGAGGTGGCATGC 61.183 63.158 9.90 9.90 0.00 4.06 R
2086 2375 2.745821 GCACTTCTCATGCATGTTGAGA 59.254 45.455 25.43 19.08 45.93 3.27 R
2087 2376 2.747989 AGCACTTCTCATGCATGTTGAG 59.252 45.455 25.43 20.94 45.92 3.02 R
2925 3595 2.226437 CCAAACGGAACAGATGAACCTG 59.774 50.000 0.00 0.00 39.93 4.00 R
3363 4133 2.171448 ACAGGAGCTATCACATGGGAAC 59.829 50.000 0.00 0.00 0.00 3.62 R
4802 5591 0.108945 GTTCCAATGGCAGCAGAAGC 60.109 55.000 0.00 0.00 42.56 3.86 R
5418 6459 0.253044 GGATAGCCTCTTGCACACCA 59.747 55.000 0.00 0.00 44.83 4.17 R
6097 7138 2.200067 CCACGAGATTAGCAGCAAGAG 58.800 52.381 0.00 0.00 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 7.227711 TGACTAAAATCTTCATTTGGACACGAA 59.772 33.333 0.00 0.00 32.18 3.85
49 50 7.584987 ACTAAAATCTTCATTTGGACACGAAG 58.415 34.615 0.00 0.00 36.93 3.79
53 54 4.641396 TCTTCATTTGGACACGAAGATGT 58.359 39.130 0.00 0.00 39.07 3.06
84 85 1.338973 AGTGCCAAGTTTACGAGACGA 59.661 47.619 0.00 0.00 0.00 4.20
100 101 6.157211 ACGAGACGATGATTTAGTCAAGTTT 58.843 36.000 0.00 0.00 40.97 2.66
101 102 6.089551 ACGAGACGATGATTTAGTCAAGTTTG 59.910 38.462 0.00 0.00 40.97 2.93
103 104 7.009631 CGAGACGATGATTTAGTCAAGTTTGAT 59.990 37.037 0.00 0.00 40.97 2.57
128 129 4.469657 TGGAGAAGTTGTGGTTAAGCAAT 58.530 39.130 9.30 0.00 0.00 3.56
132 133 7.029563 GGAGAAGTTGTGGTTAAGCAATATTG 58.970 38.462 9.30 11.27 0.00 1.90
137 138 7.906327 AGTTGTGGTTAAGCAATATTGGATTT 58.094 30.769 17.02 0.66 0.00 2.17
138 139 8.374743 AGTTGTGGTTAAGCAATATTGGATTTT 58.625 29.630 17.02 0.00 0.00 1.82
139 140 8.442384 GTTGTGGTTAAGCAATATTGGATTTTG 58.558 33.333 17.02 0.00 0.00 2.44
140 141 7.675062 TGTGGTTAAGCAATATTGGATTTTGT 58.325 30.769 17.02 0.00 0.00 2.83
163 164 9.527157 TTGTTTAGGATAAACAAGATTGGATCA 57.473 29.630 18.91 0.00 42.96 2.92
167 168 9.753674 TTAGGATAAACAAGATTGGATCAAAGT 57.246 29.630 0.00 0.00 0.00 2.66
171 420 9.565213 GATAAACAAGATTGGATCAAAGTCTTG 57.435 33.333 21.38 21.38 46.82 3.02
180 429 6.564709 TGGATCAAAGTCTTGAAGATGTTG 57.435 37.500 12.13 12.13 44.64 3.33
183 432 7.884877 TGGATCAAAGTCTTGAAGATGTTGTAT 59.115 33.333 15.78 10.52 44.64 2.29
263 514 4.142138 TGGAACACACATTTTACCCAACAC 60.142 41.667 0.00 0.00 0.00 3.32
266 517 3.383185 ACACACATTTTACCCAACACAGG 59.617 43.478 0.00 0.00 0.00 4.00
290 541 5.974751 GGTACGAGCAAAATGAAAAGAAACA 59.025 36.000 0.00 0.00 0.00 2.83
298 549 7.169140 AGCAAAATGAAAAGAAACAATCCGTAC 59.831 33.333 0.00 0.00 0.00 3.67
348 599 4.032653 CCATGTCGGCCCCAAATT 57.967 55.556 0.00 0.00 0.00 1.82
370 621 1.421410 CCACTTAGCCATCACGACGC 61.421 60.000 0.00 0.00 0.00 5.19
379 630 3.567478 ATCACGACGCCAGTTCGCA 62.567 57.895 0.00 0.00 0.00 5.10
386 637 2.485122 GCCAGTTCGCATTTCCCG 59.515 61.111 0.00 0.00 0.00 5.14
387 638 2.485122 CCAGTTCGCATTTCCCGC 59.515 61.111 0.00 0.00 0.00 6.13
412 663 4.324402 GCATAGCGAACCACAAGAAAAATG 59.676 41.667 0.00 0.00 0.00 2.32
440 696 7.955918 AGAAATTTTGTATATCCATTCCAGGC 58.044 34.615 0.00 0.00 0.00 4.85
447 703 0.467384 ATCCATTCCAGGCTGAGTCG 59.533 55.000 17.94 0.00 0.00 4.18
463 719 3.062042 GAGTCGTCCACCGTGTATTTTT 58.938 45.455 0.00 0.00 37.94 1.94
478 734 6.563196 CGTGTATTTTTCACAAGTCATGTCGA 60.563 38.462 0.00 0.00 41.46 4.20
480 736 4.545823 TTTTTCACAAGTCATGTCGACC 57.454 40.909 14.12 0.00 46.69 4.79
487 743 2.086054 AGTCATGTCGACCTCAAAGC 57.914 50.000 14.12 0.00 46.69 3.51
488 744 1.344438 AGTCATGTCGACCTCAAAGCA 59.656 47.619 14.12 0.00 46.69 3.91
517 773 1.207089 CTCCGGCATAGAGAACCACAA 59.793 52.381 0.00 0.00 32.86 3.33
527 784 6.823689 GCATAGAGAACCACAAGAAAATAGGA 59.176 38.462 0.00 0.00 0.00 2.94
548 805 0.684805 AAAACCAACCGTGCCAAGGA 60.685 50.000 2.90 0.00 0.00 3.36
584 848 1.244019 AATGCCCAAGAAGCACGACC 61.244 55.000 0.00 0.00 44.40 4.79
611 878 2.733593 GTGGAGACGTGGACGCAC 60.734 66.667 0.00 0.00 44.43 5.34
654 921 2.879233 GCACCCTGGTCGACCAAGA 61.879 63.158 35.36 15.57 46.97 3.02
655 922 1.293498 CACCCTGGTCGACCAAGAG 59.707 63.158 35.36 27.24 46.97 2.85
656 923 2.266055 CCCTGGTCGACCAAGAGC 59.734 66.667 35.36 9.49 46.97 4.09
657 924 2.286523 CCCTGGTCGACCAAGAGCT 61.287 63.158 35.36 0.00 46.97 4.09
658 925 1.216710 CCTGGTCGACCAAGAGCTC 59.783 63.158 35.36 5.27 46.97 4.09
659 926 1.153939 CTGGTCGACCAAGAGCTCG 60.154 63.158 35.36 19.60 46.97 5.03
660 927 2.507324 GGTCGACCAAGAGCTCGC 60.507 66.667 29.75 0.00 35.89 5.03
661 928 2.507324 GTCGACCAAGAGCTCGCC 60.507 66.667 8.37 0.00 0.00 5.54
662 929 4.116328 TCGACCAAGAGCTCGCCG 62.116 66.667 8.37 8.76 0.00 6.46
678 945 4.277593 CGCGCTGGCCCACAAAAA 62.278 61.111 5.56 0.00 35.02 1.94
715 982 2.434359 GCCCACACGTCAGCTACC 60.434 66.667 0.00 0.00 0.00 3.18
716 983 3.056458 CCCACACGTCAGCTACCA 58.944 61.111 0.00 0.00 0.00 3.25
717 984 1.079819 CCCACACGTCAGCTACCAG 60.080 63.158 0.00 0.00 0.00 4.00
719 986 1.006220 CACACGTCAGCTACCAGCA 60.006 57.895 0.38 0.00 45.56 4.41
720 987 1.010935 CACACGTCAGCTACCAGCAG 61.011 60.000 0.38 0.00 45.56 4.24
721 988 1.290324 CACGTCAGCTACCAGCAGT 59.710 57.895 0.38 0.00 45.56 4.40
722 989 1.010935 CACGTCAGCTACCAGCAGTG 61.011 60.000 0.38 2.11 45.56 3.66
723 990 2.097038 CGTCAGCTACCAGCAGTGC 61.097 63.158 7.13 7.13 45.56 4.40
724 991 1.004560 GTCAGCTACCAGCAGTGCA 60.005 57.895 19.20 0.00 45.56 4.57
725 992 1.018226 GTCAGCTACCAGCAGTGCAG 61.018 60.000 19.20 9.58 45.56 4.41
726 993 2.046507 AGCTACCAGCAGTGCAGC 60.047 61.111 19.20 17.04 45.56 5.25
727 994 2.359107 GCTACCAGCAGTGCAGCA 60.359 61.111 19.20 0.00 41.89 4.41
728 995 2.684843 GCTACCAGCAGTGCAGCAC 61.685 63.158 18.55 18.55 41.89 4.40
729 996 2.032528 TACCAGCAGTGCAGCACC 59.967 61.111 22.41 7.82 34.49 5.01
730 997 3.551496 TACCAGCAGTGCAGCACCC 62.551 63.158 22.41 13.41 34.49 4.61
731 998 4.655647 CCAGCAGTGCAGCACCCT 62.656 66.667 22.41 15.50 34.49 4.34
741 1008 4.988716 AGCACCCTGGTCGACCGA 62.989 66.667 28.70 16.89 39.43 4.69
778 1045 4.640855 ACACGTCAGCGACCGGTG 62.641 66.667 14.63 14.53 44.11 4.94
810 1077 5.239963 GGTAAGAATTTGAGTCCGTTTTCCA 59.760 40.000 0.00 0.00 0.00 3.53
814 1081 6.816136 AGAATTTGAGTCCGTTTTCCATTTT 58.184 32.000 0.00 0.00 0.00 1.82
817 1084 4.577834 TGAGTCCGTTTTCCATTTTTCC 57.422 40.909 0.00 0.00 0.00 3.13
844 1113 1.421485 GCGACGAAATGCAGTCCAG 59.579 57.895 0.00 0.00 34.10 3.86
847 1116 1.160137 GACGAAATGCAGTCCAGCTT 58.840 50.000 0.00 0.00 34.99 3.74
848 1117 1.537202 GACGAAATGCAGTCCAGCTTT 59.463 47.619 0.00 0.00 33.86 3.51
853 1122 3.825143 AATGCAGTCCAGCTTTTGTTT 57.175 38.095 0.00 0.00 34.99 2.83
1212 1481 3.407967 GGAAGGCCCATCCACGGA 61.408 66.667 18.18 0.00 36.92 4.69
1213 1482 2.190578 GAAGGCCCATCCACGGAG 59.809 66.667 0.00 0.00 37.29 4.63
1218 1487 2.765807 CCCATCCACGGAGCCTCT 60.766 66.667 0.00 0.00 0.00 3.69
1245 1514 1.710341 CTCCCTCCCCCTGACCTTA 59.290 63.158 0.00 0.00 0.00 2.69
1279 1548 1.228862 ATCGCCCAGCCCACTTTTT 60.229 52.632 0.00 0.00 0.00 1.94
1285 1559 1.187567 CCAGCCCACTTTTTCCCCAG 61.188 60.000 0.00 0.00 0.00 4.45
1366 1644 5.329035 TCGTCATGAGATTGAGATTGTGA 57.671 39.130 0.00 0.00 0.00 3.58
1377 1655 4.482952 TGAGATTGTGATGCTCTGATGT 57.517 40.909 0.00 0.00 0.00 3.06
1437 1715 5.262009 TGGTTACTAGATCATCTATCGGGG 58.738 45.833 0.00 0.00 39.79 5.73
1445 1723 2.574955 ATCTATCGGGGTCAGCCGC 61.575 63.158 0.00 0.00 43.52 6.53
1446 1724 4.301027 CTATCGGGGTCAGCCGCC 62.301 72.222 0.00 0.00 44.02 6.13
1447 1725 4.853142 TATCGGGGTCAGCCGCCT 62.853 66.667 0.00 0.00 43.92 5.52
1452 1730 4.021925 GGGTCAGCCGCCTCTGTT 62.022 66.667 0.54 0.00 35.63 3.16
1453 1731 2.656069 GGGTCAGCCGCCTCTGTTA 61.656 63.158 0.54 0.00 35.63 2.41
1454 1732 1.295423 GGTCAGCCGCCTCTGTTAA 59.705 57.895 0.54 0.00 35.63 2.01
1533 1814 3.176552 AGTCCGATGAGATGCTTGAAG 57.823 47.619 0.00 0.00 0.00 3.02
1535 1816 1.483827 TCCGATGAGATGCTTGAAGCT 59.516 47.619 18.94 3.75 42.97 3.74
1550 1831 4.771590 TGAAGCTGGTGAATTGTTGATC 57.228 40.909 0.00 0.00 0.00 2.92
1586 1867 4.999950 AGATCATAATTCGATGCTTCCACC 59.000 41.667 0.00 0.00 0.00 4.61
1644 1925 7.411486 TTGTACAGAAAGGGACAATTCAAAA 57.589 32.000 0.00 0.00 0.00 2.44
1645 1926 7.595819 TGTACAGAAAGGGACAATTCAAAAT 57.404 32.000 0.00 0.00 0.00 1.82
1647 1928 8.573035 TGTACAGAAAGGGACAATTCAAAATAC 58.427 33.333 0.00 0.00 0.00 1.89
1648 1929 7.839680 ACAGAAAGGGACAATTCAAAATACT 57.160 32.000 0.00 0.00 0.00 2.12
1649 1930 7.886338 ACAGAAAGGGACAATTCAAAATACTC 58.114 34.615 0.00 0.00 0.00 2.59
1650 1931 7.725844 ACAGAAAGGGACAATTCAAAATACTCT 59.274 33.333 0.00 0.00 0.00 3.24
1682 1963 3.244735 TGCAAGAGTGGGCACAAGTAATA 60.245 43.478 0.00 0.00 34.58 0.98
1772 2053 2.481854 GATCTGCTGCTCATCGTCATT 58.518 47.619 0.00 0.00 0.00 2.57
1780 2061 4.179298 CTGCTCATCGTCATTCTCAGAAA 58.821 43.478 0.00 0.00 0.00 2.52
1845 2126 2.200373 GCTACTTGCTTTTCCTGGGA 57.800 50.000 0.00 0.00 38.95 4.37
1869 2156 3.938963 TCTCCCGTTTTGAATGATGTAGC 59.061 43.478 0.00 0.00 0.00 3.58
1874 2161 4.616802 CCGTTTTGAATGATGTAGCAACAC 59.383 41.667 0.00 0.00 38.78 3.32
1885 2172 6.233434 TGATGTAGCAACACTTCAGATCTTT 58.767 36.000 0.00 0.00 38.78 2.52
1950 2238 4.693095 TGCATCTGAAATACTTTACACGCA 59.307 37.500 0.00 0.00 0.00 5.24
1951 2239 5.022021 GCATCTGAAATACTTTACACGCAC 58.978 41.667 0.00 0.00 0.00 5.34
1952 2240 5.390461 GCATCTGAAATACTTTACACGCACA 60.390 40.000 0.00 0.00 0.00 4.57
1953 2241 6.675486 GCATCTGAAATACTTTACACGCACAT 60.675 38.462 0.00 0.00 0.00 3.21
1954 2242 6.403333 TCTGAAATACTTTACACGCACATC 57.597 37.500 0.00 0.00 0.00 3.06
2020 2308 6.672657 ACACTTAAGTAGTTGATCCCCACTAT 59.327 38.462 8.04 0.00 33.85 2.12
2080 2369 9.967346 CATCGACCTTATTACTTCTATTTCTCA 57.033 33.333 0.00 0.00 0.00 3.27
2123 2412 8.445275 TGAGAAGTGCTACAGAAAATTGTTTA 57.555 30.769 0.00 0.00 32.56 2.01
2171 2828 6.292274 CCCGAAAATTGTTTGATTGTGTTCTG 60.292 38.462 0.00 0.00 0.00 3.02
2185 2842 9.033481 TGATTGTGTTCTGATTGTTTGATTTTC 57.967 29.630 0.00 0.00 0.00 2.29
2254 2911 9.102757 CACTCTACAGTGCATTTTAATGACTAT 57.897 33.333 6.64 0.43 43.77 2.12
2335 2992 6.538021 CCTTTGGATCTTAGTGTCATTCAGAG 59.462 42.308 0.00 0.00 0.00 3.35
2440 3097 3.586470 TGTTGTAGAAGCCCTTTGGAA 57.414 42.857 0.00 0.00 0.00 3.53
2497 3154 1.902508 TGGGTAAGCTCTCTGGTTGAG 59.097 52.381 0.00 0.00 43.96 3.02
2546 3203 2.034685 GGGTTTTCTGAGAGTTGGTTGC 59.965 50.000 0.00 0.00 0.00 4.17
2581 3238 9.667989 GCACATGAATTTTCTTTTGCTATTTTT 57.332 25.926 0.00 0.00 36.03 1.94
2617 3278 5.769162 TGACAATCAACAATGACCATCTTGA 59.231 36.000 0.00 5.88 38.69 3.02
2657 3327 7.546667 AGACTACACGTGAAACTGAAAAACTTA 59.453 33.333 25.01 0.00 31.75 2.24
2664 3334 8.060090 ACGTGAAACTGAAAAACTTACTATTCG 58.940 33.333 0.00 0.00 31.75 3.34
2703 3373 5.942872 AGCATTTGAATCTGGAAAACGTAG 58.057 37.500 0.00 0.00 0.00 3.51
2776 3446 6.906157 AAGCACCATAATATCTTGGGAATG 57.094 37.500 8.35 0.70 37.32 2.67
2853 3523 2.439409 CATGCTGTGGTGATTTCCTGA 58.561 47.619 0.00 0.00 0.00 3.86
2871 3541 3.765511 CCTGATTTTTCTTCCATCCTGCA 59.234 43.478 0.00 0.00 0.00 4.41
2879 3549 5.692115 TTCTTCCATCCTGCAAGTATACA 57.308 39.130 5.50 0.00 0.00 2.29
2891 3561 7.446931 TCCTGCAAGTATACATTTGTTTTCTCA 59.553 33.333 5.50 0.00 0.00 3.27
2925 3595 8.745837 CATTGTTTATGTTCTTTCAGTGTGTTC 58.254 33.333 0.00 0.00 0.00 3.18
2952 3622 5.873179 TCATCTGTTCCGTTTGGTTAATC 57.127 39.130 0.00 0.00 36.30 1.75
3028 3755 7.390440 TCCATAATTCTTGTTGAAGTCGTGATT 59.610 33.333 0.00 0.00 38.18 2.57
3034 3761 7.780008 TCTTGTTGAAGTCGTGATTTTCTTA 57.220 32.000 0.00 0.00 0.00 2.10
3092 3819 5.799936 CACTCACAATTTTCACTGTTTCGTT 59.200 36.000 0.00 0.00 0.00 3.85
3121 3848 3.329929 AAAACTAGTTACCTGCCCTCG 57.670 47.619 8.92 0.00 0.00 4.63
3188 3915 1.283613 TGGCCTGGAATTTCGGTGTAT 59.716 47.619 3.32 0.00 0.00 2.29
3228 3998 6.095580 GTCGATATGAGTTGCCTGGAGATATA 59.904 42.308 0.00 0.00 0.00 0.86
3259 4029 1.135112 CCTTCCTTTGCCGGTAAATGC 60.135 52.381 18.45 0.00 0.00 3.56
3332 4102 6.737720 TTGAGCTACTATCAAGGACATCAT 57.262 37.500 0.00 0.00 32.96 2.45
3333 4103 6.737720 TGAGCTACTATCAAGGACATCATT 57.262 37.500 0.00 0.00 0.00 2.57
3334 4104 6.753180 TGAGCTACTATCAAGGACATCATTC 58.247 40.000 0.00 0.00 0.00 2.67
3335 4105 6.107901 AGCTACTATCAAGGACATCATTCC 57.892 41.667 0.00 0.00 35.66 3.01
3337 4107 6.014669 AGCTACTATCAAGGACATCATTCCTC 60.015 42.308 0.00 0.00 46.06 3.71
3338 4108 6.014669 GCTACTATCAAGGACATCATTCCTCT 60.015 42.308 0.00 0.00 46.06 3.69
3339 4109 6.172136 ACTATCAAGGACATCATTCCTCTG 57.828 41.667 0.00 0.00 46.06 3.35
3340 4110 5.664908 ACTATCAAGGACATCATTCCTCTGT 59.335 40.000 0.00 0.00 46.06 3.41
3341 4111 4.212143 TCAAGGACATCATTCCTCTGTG 57.788 45.455 0.00 0.00 46.06 3.66
3342 4112 3.840078 TCAAGGACATCATTCCTCTGTGA 59.160 43.478 0.00 0.00 46.06 3.58
3343 4113 4.472470 TCAAGGACATCATTCCTCTGTGAT 59.528 41.667 0.00 0.00 46.06 3.06
3344 4114 5.662657 TCAAGGACATCATTCCTCTGTGATA 59.337 40.000 0.00 0.00 46.06 2.15
3345 4115 5.804944 AGGACATCATTCCTCTGTGATAG 57.195 43.478 0.00 0.00 42.98 2.08
3346 4116 4.040217 AGGACATCATTCCTCTGTGATAGC 59.960 45.833 0.00 0.00 42.98 2.97
3347 4117 4.040217 GGACATCATTCCTCTGTGATAGCT 59.960 45.833 0.00 0.00 33.52 3.32
3348 4118 5.454471 GGACATCATTCCTCTGTGATAGCTT 60.454 44.000 0.00 0.00 33.52 3.74
3349 4119 5.999044 ACATCATTCCTCTGTGATAGCTTT 58.001 37.500 0.00 0.00 33.52 3.51
3350 4120 6.421485 ACATCATTCCTCTGTGATAGCTTTT 58.579 36.000 0.00 0.00 33.52 2.27
3351 4121 6.888632 ACATCATTCCTCTGTGATAGCTTTTT 59.111 34.615 0.00 0.00 33.52 1.94
3352 4122 6.992063 TCATTCCTCTGTGATAGCTTTTTC 57.008 37.500 0.00 0.00 0.00 2.29
3353 4123 6.715280 TCATTCCTCTGTGATAGCTTTTTCT 58.285 36.000 0.00 0.00 0.00 2.52
3354 4124 7.170965 TCATTCCTCTGTGATAGCTTTTTCTT 58.829 34.615 0.00 0.00 0.00 2.52
3355 4125 7.667219 TCATTCCTCTGTGATAGCTTTTTCTTT 59.333 33.333 0.00 0.00 0.00 2.52
3356 4126 7.440523 TTCCTCTGTGATAGCTTTTTCTTTC 57.559 36.000 0.00 0.00 0.00 2.62
3357 4127 5.940470 TCCTCTGTGATAGCTTTTTCTTTCC 59.060 40.000 0.00 0.00 0.00 3.13
3358 4128 5.163814 CCTCTGTGATAGCTTTTTCTTTCCG 60.164 44.000 0.00 0.00 0.00 4.30
3359 4129 5.547465 TCTGTGATAGCTTTTTCTTTCCGA 58.453 37.500 0.00 0.00 0.00 4.55
3360 4130 5.995282 TCTGTGATAGCTTTTTCTTTCCGAA 59.005 36.000 0.00 0.00 0.00 4.30
3361 4131 6.655003 TCTGTGATAGCTTTTTCTTTCCGAAT 59.345 34.615 0.00 0.00 0.00 3.34
3362 4132 7.822334 TCTGTGATAGCTTTTTCTTTCCGAATA 59.178 33.333 0.00 0.00 0.00 1.75
3363 4133 7.974675 TGTGATAGCTTTTTCTTTCCGAATAG 58.025 34.615 0.00 0.00 0.00 1.73
3428 4198 4.839668 TGTTACAGTTGGGTTATTGCAC 57.160 40.909 0.00 0.00 0.00 4.57
3496 4268 9.463443 AACTACAAAATAGTTGAAGTTGCATTC 57.537 29.630 0.00 0.00 36.51 2.67
3675 4451 3.719268 TTGATTGAGCTGGGTGTACAT 57.281 42.857 0.00 0.00 0.00 2.29
3690 4466 2.670905 TGTACATACATGTGTGCGCTTC 59.329 45.455 21.13 8.73 41.89 3.86
3773 4551 2.370189 GGTCTGATGGGTTCTAGATGGG 59.630 54.545 0.00 0.00 0.00 4.00
3774 4552 3.309296 GTCTGATGGGTTCTAGATGGGA 58.691 50.000 0.00 0.00 0.00 4.37
3812 4599 1.071699 TGAACTCTTCCAAACCGGGAG 59.928 52.381 6.32 2.89 42.78 4.30
3858 4645 2.713167 GAGGGAGATTGGGATGGAATGA 59.287 50.000 0.00 0.00 0.00 2.57
3956 4744 7.923878 ACTGTTTGTAGTCTTTGTTTTGTTTGT 59.076 29.630 0.00 0.00 0.00 2.83
3967 4755 9.698309 TCTTTGTTTTGTTTGTGAAGTGATTTA 57.302 25.926 0.00 0.00 0.00 1.40
4015 4803 5.402568 CAGCGGACATGTATTGATGTACTAC 59.597 44.000 0.00 0.00 36.67 2.73
4139 4927 5.311265 TGCTGAATGTGAGAAAAGAGACAT 58.689 37.500 0.00 0.00 0.00 3.06
4243 5031 6.061231 ACTCTGGAAAAATTGACGAAGAAC 57.939 37.500 0.00 0.00 0.00 3.01
4422 5210 7.039993 AGCTTCTTTCGGTTTATTGGTTATTGT 60.040 33.333 0.00 0.00 0.00 2.71
4469 5257 7.807977 TTGCCTGATTCATTATTTAGGACTC 57.192 36.000 0.00 0.00 0.00 3.36
4470 5258 6.299141 TGCCTGATTCATTATTTAGGACTCC 58.701 40.000 0.00 0.00 0.00 3.85
4471 5259 5.707764 GCCTGATTCATTATTTAGGACTCCC 59.292 44.000 0.00 0.00 0.00 4.30
4472 5260 6.466470 GCCTGATTCATTATTTAGGACTCCCT 60.466 42.308 0.00 0.00 46.62 4.20
4473 5261 7.164803 CCTGATTCATTATTTAGGACTCCCTC 58.835 42.308 0.00 0.00 43.14 4.30
4474 5262 7.079451 TGATTCATTATTTAGGACTCCCTCC 57.921 40.000 0.00 0.00 43.14 4.30
4475 5263 5.546621 TTCATTATTTAGGACTCCCTCCG 57.453 43.478 0.00 0.00 45.10 4.63
4476 5264 4.553678 TCATTATTTAGGACTCCCTCCGT 58.446 43.478 0.00 0.00 45.10 4.69
4477 5265 4.966805 TCATTATTTAGGACTCCCTCCGTT 59.033 41.667 0.00 0.00 45.10 4.44
4478 5266 5.070047 TCATTATTTAGGACTCCCTCCGTTC 59.930 44.000 0.00 0.00 45.10 3.95
4479 5267 1.565067 TTTAGGACTCCCTCCGTTCC 58.435 55.000 0.00 0.00 45.10 3.62
4480 5268 0.708802 TTAGGACTCCCTCCGTTCCT 59.291 55.000 0.00 0.00 45.10 3.36
4481 5269 1.600058 TAGGACTCCCTCCGTTCCTA 58.400 55.000 0.00 0.00 45.10 2.94
4482 5270 0.708802 AGGACTCCCTCCGTTCCTAA 59.291 55.000 0.00 0.00 45.10 2.69
4483 5271 1.078324 AGGACTCCCTCCGTTCCTAAA 59.922 52.381 0.00 0.00 45.10 1.85
4484 5272 2.117051 GGACTCCCTCCGTTCCTAAAT 58.883 52.381 0.00 0.00 0.00 1.40
4485 5273 3.052338 AGGACTCCCTCCGTTCCTAAATA 60.052 47.826 0.00 0.00 45.10 1.40
4486 5274 3.902467 GGACTCCCTCCGTTCCTAAATAT 59.098 47.826 0.00 0.00 0.00 1.28
4487 5275 5.082425 GGACTCCCTCCGTTCCTAAATATA 58.918 45.833 0.00 0.00 0.00 0.86
4488 5276 5.541484 GGACTCCCTCCGTTCCTAAATATAA 59.459 44.000 0.00 0.00 0.00 0.98
4489 5277 6.295180 GGACTCCCTCCGTTCCTAAATATAAG 60.295 46.154 0.00 0.00 0.00 1.73
4490 5278 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
4491 5279 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
4492 5280 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
4493 5281 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
4494 5282 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
4495 5283 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
4496 5284 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
4513 5301 8.367660 AGTCTTTGTAGAGATTTCACTATGGA 57.632 34.615 0.00 0.00 0.00 3.41
4514 5302 8.254508 AGTCTTTGTAGAGATTTCACTATGGAC 58.745 37.037 0.00 0.00 0.00 4.02
4515 5303 8.254508 GTCTTTGTAGAGATTTCACTATGGACT 58.745 37.037 0.00 0.00 0.00 3.85
4516 5304 9.475620 TCTTTGTAGAGATTTCACTATGGACTA 57.524 33.333 0.00 0.00 0.00 2.59
4517 5305 9.522804 CTTTGTAGAGATTTCACTATGGACTAC 57.477 37.037 0.00 0.00 0.00 2.73
4518 5306 8.589701 TTGTAGAGATTTCACTATGGACTACA 57.410 34.615 0.00 0.00 36.83 2.74
4519 5307 8.768501 TGTAGAGATTTCACTATGGACTACAT 57.231 34.615 0.00 0.00 43.68 2.29
4520 5308 9.862149 TGTAGAGATTTCACTATGGACTACATA 57.138 33.333 0.00 0.00 41.03 2.29
4522 5310 7.877003 AGAGATTTCACTATGGACTACATACG 58.123 38.462 0.00 0.00 41.03 3.06
4523 5311 6.982852 AGATTTCACTATGGACTACATACGG 58.017 40.000 0.00 0.00 41.03 4.02
4524 5312 6.776116 AGATTTCACTATGGACTACATACGGA 59.224 38.462 0.00 0.00 41.03 4.69
4525 5313 6.387041 TTTCACTATGGACTACATACGGAG 57.613 41.667 0.00 0.00 41.03 4.63
4526 5314 3.819337 TCACTATGGACTACATACGGAGC 59.181 47.826 0.00 0.00 41.03 4.70
4527 5315 3.568430 CACTATGGACTACATACGGAGCA 59.432 47.826 0.00 0.00 41.03 4.26
4528 5316 4.037565 CACTATGGACTACATACGGAGCAA 59.962 45.833 0.00 0.00 41.03 3.91
4529 5317 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
4530 5318 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
4531 5319 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
4532 5320 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
4533 5321 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
4534 5322 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
4535 5323 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
4536 5324 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
4537 5325 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
4538 5326 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
4539 5327 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
4540 5328 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
4541 5329 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
4542 5330 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
4543 5331 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
4544 5332 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
4545 5333 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
4546 5334 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
4547 5335 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
4548 5336 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
4549 5337 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
4550 5338 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
4556 5344 8.791327 TGAATGAATCTACACTCTAAAATGCA 57.209 30.769 0.00 0.00 0.00 3.96
4557 5345 9.399797 TGAATGAATCTACACTCTAAAATGCAT 57.600 29.630 0.00 0.00 0.00 3.96
4558 5346 9.875675 GAATGAATCTACACTCTAAAATGCATC 57.124 33.333 0.00 0.00 0.00 3.91
4559 5347 9.624373 AATGAATCTACACTCTAAAATGCATCT 57.376 29.630 0.00 0.00 0.00 2.90
4561 5349 9.534565 TGAATCTACACTCTAAAATGCATCTAC 57.465 33.333 0.00 0.00 0.00 2.59
4562 5350 9.534565 GAATCTACACTCTAAAATGCATCTACA 57.465 33.333 0.00 0.00 0.00 2.74
4565 5353 9.967346 TCTACACTCTAAAATGCATCTACATAC 57.033 33.333 0.00 0.00 0.00 2.39
4566 5354 9.750125 CTACACTCTAAAATGCATCTACATACA 57.250 33.333 0.00 0.00 0.00 2.29
4570 5358 9.411801 ACTCTAAAATGCATCTACATACATACG 57.588 33.333 0.00 0.00 0.00 3.06
4571 5359 9.411801 CTCTAAAATGCATCTACATACATACGT 57.588 33.333 0.00 0.00 0.00 3.57
4586 5374 8.227731 CATACATACGTATGTGGTTCATAGTG 57.772 38.462 38.87 22.41 46.70 2.74
4587 5375 5.597806 ACATACGTATGTGGTTCATAGTGG 58.402 41.667 34.29 8.97 44.66 4.00
4588 5376 5.361571 ACATACGTATGTGGTTCATAGTGGA 59.638 40.000 34.29 0.00 44.66 4.02
4589 5377 4.811969 ACGTATGTGGTTCATAGTGGAA 57.188 40.909 0.00 0.00 39.36 3.53
4590 5378 5.353394 ACGTATGTGGTTCATAGTGGAAT 57.647 39.130 0.00 0.00 39.36 3.01
4591 5379 5.357257 ACGTATGTGGTTCATAGTGGAATC 58.643 41.667 0.00 0.00 39.36 2.52
4592 5380 5.128827 ACGTATGTGGTTCATAGTGGAATCT 59.871 40.000 0.00 0.00 39.36 2.40
4593 5381 5.692204 CGTATGTGGTTCATAGTGGAATCTC 59.308 44.000 0.00 0.00 39.36 2.75
4594 5382 5.965033 ATGTGGTTCATAGTGGAATCTCT 57.035 39.130 0.00 0.00 34.67 3.10
4595 5383 5.344743 TGTGGTTCATAGTGGAATCTCTC 57.655 43.478 0.00 0.00 0.00 3.20
4596 5384 4.162320 TGTGGTTCATAGTGGAATCTCTCC 59.838 45.833 0.00 0.00 45.64 3.71
4597 5385 7.548782 ATGTGGTTCATAGTGGAATCTCTCCA 61.549 42.308 0.00 0.00 42.66 3.86
4598 5386 8.954344 ATGTGGTTCATAGTGGAATCTCTCCAA 61.954 40.741 0.00 0.00 44.66 3.53
4617 5405 9.250624 CTCTCCAAAGACTTATATTTAGGAACG 57.749 37.037 0.00 0.00 0.00 3.95
4618 5406 8.202137 TCTCCAAAGACTTATATTTAGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
4619 5407 8.081517 TCCAAAGACTTATATTTAGGAACGGA 57.918 34.615 0.00 0.00 0.00 4.69
4620 5408 8.202137 TCCAAAGACTTATATTTAGGAACGGAG 58.798 37.037 0.00 0.00 0.00 4.63
4621 5409 7.441458 CCAAAGACTTATATTTAGGAACGGAGG 59.559 40.741 0.00 0.00 0.00 4.30
4622 5410 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
4737 5526 8.932945 TCTATGTCTGTAAATGACTGTTGATC 57.067 34.615 0.00 0.00 35.63 2.92
4738 5527 8.531146 TCTATGTCTGTAAATGACTGTTGATCA 58.469 33.333 0.00 0.00 35.63 2.92
4739 5528 7.984422 ATGTCTGTAAATGACTGTTGATCAA 57.016 32.000 3.38 3.38 35.63 2.57
4740 5529 7.800155 TGTCTGTAAATGACTGTTGATCAAA 57.200 32.000 10.35 0.00 35.63 2.69
4741 5530 8.394971 TGTCTGTAAATGACTGTTGATCAAAT 57.605 30.769 10.35 0.00 35.63 2.32
4742 5531 9.500785 TGTCTGTAAATGACTGTTGATCAAATA 57.499 29.630 10.35 1.50 35.63 1.40
4802 5591 2.958355 AGGCCCGTGAATCAAATATTGG 59.042 45.455 0.00 0.00 0.00 3.16
4978 5768 5.089970 TGTATTGCTATGCACTGAAGTCT 57.910 39.130 0.00 0.00 38.71 3.24
5064 5854 2.937469 TTGTGCAACTGTTTCTGTGG 57.063 45.000 0.00 0.00 38.04 4.17
5072 5862 4.557496 GCAACTGTTTCTGTGGAAATCCTC 60.557 45.833 0.44 0.00 42.45 3.71
5079 5869 4.286297 TCTGTGGAAATCCTCGTTGATT 57.714 40.909 0.44 0.00 36.53 2.57
5093 6132 5.163622 CCTCGTTGATTATTTTGTGGCTGAT 60.164 40.000 0.00 0.00 0.00 2.90
5094 6133 5.639757 TCGTTGATTATTTTGTGGCTGATG 58.360 37.500 0.00 0.00 0.00 3.07
5363 6404 3.649023 TCCTAGGTTTCTTTACAGTGGCA 59.351 43.478 9.08 0.00 0.00 4.92
5364 6405 4.288626 TCCTAGGTTTCTTTACAGTGGCAT 59.711 41.667 9.08 0.00 0.00 4.40
5365 6406 4.396166 CCTAGGTTTCTTTACAGTGGCATG 59.604 45.833 0.00 0.00 0.00 4.06
5366 6407 3.157087 AGGTTTCTTTACAGTGGCATGG 58.843 45.455 0.00 0.00 0.00 3.66
5367 6408 2.352715 GGTTTCTTTACAGTGGCATGGC 60.353 50.000 13.29 13.29 0.00 4.40
5368 6409 2.284754 TTCTTTACAGTGGCATGGCA 57.715 45.000 19.43 19.43 0.00 4.92
5418 6459 0.041238 TCTCGGAATCCACCTGTCCT 59.959 55.000 0.00 0.00 0.00 3.85
5487 6528 0.688487 TTTCCCCCAAGGTACACTCG 59.312 55.000 0.00 0.00 36.75 4.18
5499 6540 2.434428 GTACACTCGAAGTCTCCTCCA 58.566 52.381 0.00 0.00 0.00 3.86
5503 6544 0.814457 CTCGAAGTCTCCTCCACCAG 59.186 60.000 0.00 0.00 0.00 4.00
5683 6724 3.250762 GCTTTGTTTGATTTGGCCTTTCC 59.749 43.478 3.32 0.00 0.00 3.13
5684 6725 4.707105 CTTTGTTTGATTTGGCCTTTCCT 58.293 39.130 3.32 0.00 35.26 3.36
5685 6726 4.769345 TTGTTTGATTTGGCCTTTCCTT 57.231 36.364 3.32 0.00 35.26 3.36
5686 6727 4.769345 TGTTTGATTTGGCCTTTCCTTT 57.231 36.364 3.32 0.00 35.26 3.11
5687 6728 4.702831 TGTTTGATTTGGCCTTTCCTTTC 58.297 39.130 3.32 0.00 35.26 2.62
5701 6742 2.238521 TCCTTTCTGTTCATGGCCAAC 58.761 47.619 10.96 3.76 0.00 3.77
5709 6750 3.609853 TGTTCATGGCCAACTAGTGATC 58.390 45.455 10.96 8.48 0.00 2.92
5718 6759 3.261580 CCAACTAGTGATCGACATTGCA 58.738 45.455 0.00 0.00 0.00 4.08
5720 6761 4.333649 CCAACTAGTGATCGACATTGCATT 59.666 41.667 0.00 0.00 0.00 3.56
5756 6797 0.613572 TGCTGGGTCACTACATCCGA 60.614 55.000 0.00 0.00 0.00 4.55
6097 7138 8.572151 GTGTCGTATACAAAATAAACATGTTGC 58.428 33.333 12.82 0.00 40.63 4.17
6149 7190 4.104831 GGATACTGGGTATTAGGCATCCT 58.895 47.826 0.00 0.00 37.71 3.24
6161 7202 8.322091 GGTATTAGGCATCCTTTGTACTCATAT 58.678 37.037 0.00 0.00 34.61 1.78
6242 7283 0.677842 GGTTCCTGGACGTGTGTACT 59.322 55.000 0.00 0.00 0.00 2.73
6269 7310 6.435591 CCCTGTTATATCACAGCTCTAGATGA 59.564 42.308 10.97 0.00 42.63 2.92
6270 7311 7.362834 CCCTGTTATATCACAGCTCTAGATGAG 60.363 44.444 10.97 0.00 42.63 2.90
6355 7438 4.724399 TCCATCTTACTTGCCACTCAAAA 58.276 39.130 0.00 0.00 33.65 2.44
6360 7443 6.121776 TCTTACTTGCCACTCAAAAGGATA 57.878 37.500 0.00 0.00 33.65 2.59
6369 7452 7.801104 TGCCACTCAAAAGGATATATCTAACA 58.199 34.615 12.42 0.00 0.00 2.41
6370 7453 8.439971 TGCCACTCAAAAGGATATATCTAACAT 58.560 33.333 12.42 0.00 0.00 2.71
6403 7486 7.304735 TGTTTTGATACATCTGTTTGAATCCG 58.695 34.615 0.00 0.00 0.00 4.18
6404 7487 7.174080 TGTTTTGATACATCTGTTTGAATCCGA 59.826 33.333 0.00 0.00 0.00 4.55
6405 7488 7.680442 TTTGATACATCTGTTTGAATCCGAA 57.320 32.000 0.00 0.00 0.00 4.30
6406 7489 6.662414 TGATACATCTGTTTGAATCCGAAC 57.338 37.500 0.00 0.00 37.23 3.95
6407 7490 6.169800 TGATACATCTGTTTGAATCCGAACA 58.830 36.000 0.00 0.00 42.71 3.18
6415 7498 6.662414 TGTTTGAATCCGAACAGATGTATC 57.338 37.500 0.00 0.00 40.71 2.24
6416 7499 6.406370 TGTTTGAATCCGAACAGATGTATCT 58.594 36.000 0.00 0.00 40.71 1.98
6417 7500 7.552459 TGTTTGAATCCGAACAGATGTATCTA 58.448 34.615 0.00 0.00 40.71 1.98
6418 7501 7.706607 TGTTTGAATCCGAACAGATGTATCTAG 59.293 37.037 0.00 0.00 40.71 2.43
6419 7502 5.773575 TGAATCCGAACAGATGTATCTAGC 58.226 41.667 0.00 0.00 34.85 3.42
6420 7503 5.301805 TGAATCCGAACAGATGTATCTAGCA 59.698 40.000 0.00 0.00 34.85 3.49
6421 7504 5.991933 ATCCGAACAGATGTATCTAGCAT 57.008 39.130 0.00 0.00 34.85 3.79
6422 7505 7.176690 TGAATCCGAACAGATGTATCTAGCATA 59.823 37.037 0.00 0.00 34.85 3.14
6423 7506 6.502136 TCCGAACAGATGTATCTAGCATAG 57.498 41.667 0.00 0.00 41.04 2.23
6460 7543 9.896645 AGATAATGTGTTCTGATACATCTGTTT 57.103 29.630 8.06 0.00 36.70 2.83
6461 7544 9.926751 GATAATGTGTTCTGATACATCTGTTTG 57.073 33.333 8.06 0.00 36.70 2.93
6462 7545 7.984422 AATGTGTTCTGATACATCTGTTTGA 57.016 32.000 8.06 0.00 36.70 2.69
6463 7546 7.984422 ATGTGTTCTGATACATCTGTTTGAA 57.016 32.000 3.16 0.00 32.88 2.69
6464 7547 7.984422 TGTGTTCTGATACATCTGTTTGAAT 57.016 32.000 0.00 0.00 0.00 2.57
6465 7548 8.032952 TGTGTTCTGATACATCTGTTTGAATC 57.967 34.615 0.00 0.00 0.00 2.52
6533 7693 7.328277 TCCGTTTGAACATAATATGGAAAGG 57.672 36.000 5.16 6.05 33.60 3.11
6534 7694 6.320164 TCCGTTTGAACATAATATGGAAAGGG 59.680 38.462 17.74 17.74 36.01 3.95
6552 7712 4.533001 AGGGGGAAGTAGATAGTTACGT 57.467 45.455 0.00 0.00 0.00 3.57
6553 7713 5.653255 AGGGGGAAGTAGATAGTTACGTA 57.347 43.478 0.00 0.00 0.00 3.57
6554 7714 6.211505 AGGGGGAAGTAGATAGTTACGTAT 57.788 41.667 0.00 0.00 0.00 3.06
6555 7715 6.008960 AGGGGGAAGTAGATAGTTACGTATG 58.991 44.000 0.00 0.00 0.00 2.39
6556 7716 6.006449 GGGGGAAGTAGATAGTTACGTATGA 58.994 44.000 0.00 0.00 0.00 2.15
6557 7717 6.662663 GGGGGAAGTAGATAGTTACGTATGAT 59.337 42.308 0.00 0.00 0.00 2.45
6558 7718 7.362747 GGGGGAAGTAGATAGTTACGTATGATG 60.363 44.444 0.00 0.00 0.00 3.07
6559 7719 7.176340 GGGGAAGTAGATAGTTACGTATGATGT 59.824 40.741 0.00 0.00 0.00 3.06
6560 7720 9.224267 GGGAAGTAGATAGTTACGTATGATGTA 57.776 37.037 0.00 0.00 0.00 2.29
6678 7839 7.927629 TTGATTCATCAAAAGCACTTAAAGCTT 59.072 29.630 8.56 8.56 43.26 3.74
6702 7863 7.559590 TCAAAAGCATCTATTTAGGAGCTTC 57.440 36.000 13.78 0.00 40.36 3.86
6707 7868 6.945218 AGCATCTATTTAGGAGCTTCTATGG 58.055 40.000 1.53 0.00 32.63 2.74
6714 7875 6.759497 TTTAGGAGCTTCTATGGCTTTTTC 57.241 37.500 1.53 0.00 40.40 2.29
6720 7881 4.518970 AGCTTCTATGGCTTTTTCGTCAAA 59.481 37.500 0.00 0.00 36.56 2.69
6724 7885 2.861462 TGGCTTTTTCGTCAAAGTGG 57.139 45.000 9.73 0.00 36.32 4.00
6751 7912 3.192466 CTGCAAAAGCAGAAGCAAAAGT 58.808 40.909 11.82 0.00 45.49 2.66
6752 7913 3.189285 TGCAAAAGCAGAAGCAAAAGTC 58.811 40.909 0.00 0.00 45.49 3.01
6761 7922 4.201714 GCAGAAGCAAAAGTCCAAACAAAC 60.202 41.667 0.00 0.00 41.58 2.93
6763 7924 5.407995 CAGAAGCAAAAGTCCAAACAAACAA 59.592 36.000 0.00 0.00 0.00 2.83
6796 7957 8.845413 GAGCATCTCCAATAGAAGATGTAAAT 57.155 34.615 12.47 0.00 39.99 1.40
6797 7958 9.282569 GAGCATCTCCAATAGAAGATGTAAATT 57.717 33.333 12.47 0.00 39.99 1.82
6798 7959 9.638176 AGCATCTCCAATAGAAGATGTAAATTT 57.362 29.630 12.47 0.00 39.99 1.82
6799 7960 9.674824 GCATCTCCAATAGAAGATGTAAATTTG 57.325 33.333 12.47 0.00 39.99 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 8.408043 TCCAACATCAAACTTGACTAAATCAT 57.592 30.769 0.00 0.00 40.49 2.45
100 101 3.576078 ACCACAACTTCTCCAACATCA 57.424 42.857 0.00 0.00 0.00 3.07
101 102 5.562890 GCTTAACCACAACTTCTCCAACATC 60.563 44.000 0.00 0.00 0.00 3.06
103 104 3.630312 GCTTAACCACAACTTCTCCAACA 59.370 43.478 0.00 0.00 0.00 3.33
137 138 9.527157 TGATCCAATCTTGTTTATCCTAAACAA 57.473 29.630 18.84 18.84 44.85 2.83
138 139 9.527157 TTGATCCAATCTTGTTTATCCTAAACA 57.473 29.630 8.07 8.07 38.26 2.83
143 144 8.112183 AGACTTTGATCCAATCTTGTTTATCCT 58.888 33.333 0.00 0.00 0.00 3.24
144 145 8.286191 AGACTTTGATCCAATCTTGTTTATCC 57.714 34.615 0.00 0.00 0.00 2.59
145 146 9.565213 CAAGACTTTGATCCAATCTTGTTTATC 57.435 33.333 15.72 0.00 40.79 1.75
146 147 9.300681 TCAAGACTTTGATCCAATCTTGTTTAT 57.699 29.630 19.41 0.00 44.28 1.40
147 148 8.690203 TCAAGACTTTGATCCAATCTTGTTTA 57.310 30.769 19.41 8.21 44.28 2.01
149 150 7.503566 TCTTCAAGACTTTGATCCAATCTTGTT 59.496 33.333 19.41 0.00 44.28 2.83
151 152 7.444629 TCTTCAAGACTTTGATCCAATCTTG 57.555 36.000 16.80 16.80 44.95 3.02
152 153 7.668886 ACATCTTCAAGACTTTGATCCAATCTT 59.331 33.333 0.00 0.00 42.60 2.40
153 154 7.173722 ACATCTTCAAGACTTTGATCCAATCT 58.826 34.615 0.00 0.00 42.60 2.40
154 155 7.388460 ACATCTTCAAGACTTTGATCCAATC 57.612 36.000 0.00 0.00 42.60 2.67
155 156 7.232127 ACAACATCTTCAAGACTTTGATCCAAT 59.768 33.333 14.28 0.00 42.60 3.16
156 157 6.547141 ACAACATCTTCAAGACTTTGATCCAA 59.453 34.615 14.28 0.00 42.60 3.53
157 158 6.064060 ACAACATCTTCAAGACTTTGATCCA 58.936 36.000 14.28 0.00 42.60 3.41
158 159 6.566197 ACAACATCTTCAAGACTTTGATCC 57.434 37.500 14.28 0.00 42.60 3.36
214 464 1.074727 TGTTGGGGTGGATCGTGAAAT 59.925 47.619 0.00 0.00 0.00 2.17
263 514 4.215399 TCTTTTCATTTTGCTCGTACCCTG 59.785 41.667 0.00 0.00 0.00 4.45
266 517 5.974751 TGTTTCTTTTCATTTTGCTCGTACC 59.025 36.000 0.00 0.00 0.00 3.34
268 519 7.381139 GGATTGTTTCTTTTCATTTTGCTCGTA 59.619 33.333 0.00 0.00 0.00 3.43
305 556 7.435784 GCTTTTCATTTCATGCCATTTGTTTTT 59.564 29.630 0.00 0.00 0.00 1.94
306 557 6.919115 GCTTTTCATTTCATGCCATTTGTTTT 59.081 30.769 0.00 0.00 0.00 2.43
347 598 1.621317 TCGTGATGGCTAAGTGGACAA 59.379 47.619 0.00 0.00 0.00 3.18
348 599 1.067142 GTCGTGATGGCTAAGTGGACA 60.067 52.381 0.00 0.00 0.00 4.02
370 621 2.485122 GCGGGAAATGCGAACTGG 59.515 61.111 0.00 0.00 0.00 4.00
434 690 2.117423 TGGACGACTCAGCCTGGA 59.883 61.111 0.00 0.00 0.00 3.86
447 703 4.035909 ACTTGTGAAAAATACACGGTGGAC 59.964 41.667 13.48 0.00 40.61 4.02
478 734 1.284198 AGATGCTGGATGCTTTGAGGT 59.716 47.619 0.00 0.00 43.37 3.85
480 736 1.948145 GGAGATGCTGGATGCTTTGAG 59.052 52.381 0.00 0.00 43.37 3.02
487 743 0.322648 TATGCCGGAGATGCTGGATG 59.677 55.000 5.05 0.00 46.81 3.51
488 744 0.612229 CTATGCCGGAGATGCTGGAT 59.388 55.000 5.05 0.00 46.81 3.41
560 817 2.288395 CGTGCTTCTTGGGCATTTTTCT 60.288 45.455 0.00 0.00 41.86 2.52
569 826 1.841663 CGTTGGTCGTGCTTCTTGGG 61.842 60.000 0.00 0.00 34.52 4.12
597 861 1.352156 GGAATGTGCGTCCACGTCTC 61.352 60.000 0.36 0.00 45.04 3.36
598 862 1.374252 GGAATGTGCGTCCACGTCT 60.374 57.895 0.36 0.00 45.04 4.18
602 866 1.495951 GAACGGAATGTGCGTCCAC 59.504 57.895 0.00 0.00 45.62 4.02
605 869 1.495951 GTGGAACGGAATGTGCGTC 59.504 57.895 0.00 0.00 45.62 5.19
611 878 1.668419 GATGGAGGTGGAACGGAATG 58.332 55.000 0.00 0.00 38.12 2.67
661 928 4.277593 TTTTTGTGGGCCAGCGCG 62.278 61.111 6.40 0.00 35.02 6.86
678 945 4.683334 GCGCGGCGAGCTGTTTTT 62.683 61.111 28.03 0.00 45.59 1.94
715 982 3.362797 CAGGGTGCTGCACTGCTG 61.363 66.667 29.54 11.78 42.33 4.41
719 986 4.320456 CGACCAGGGTGCTGCACT 62.320 66.667 29.54 11.82 34.40 4.40
720 987 4.314440 TCGACCAGGGTGCTGCAC 62.314 66.667 24.02 24.02 0.00 4.57
721 988 4.314440 GTCGACCAGGGTGCTGCA 62.314 66.667 3.51 0.00 0.00 4.41
723 990 4.742201 CGGTCGACCAGGGTGCTG 62.742 72.222 32.80 11.27 35.14 4.41
724 991 4.988716 TCGGTCGACCAGGGTGCT 62.989 66.667 32.80 0.00 35.14 4.40
725 992 4.436998 CTCGGTCGACCAGGGTGC 62.437 72.222 32.80 5.52 35.14 5.01
726 993 2.675423 TCTCGGTCGACCAGGGTG 60.675 66.667 32.80 16.99 35.14 4.61
727 994 2.361357 CTCTCGGTCGACCAGGGT 60.361 66.667 32.80 0.00 35.14 4.34
728 995 3.827898 GCTCTCGGTCGACCAGGG 61.828 72.222 32.80 26.87 35.14 4.45
729 996 2.752238 AGCTCTCGGTCGACCAGG 60.752 66.667 32.80 23.39 35.14 4.45
730 997 2.795297 GAGCTCTCGGTCGACCAG 59.205 66.667 32.80 26.24 35.14 4.00
752 1019 4.320456 CTGACGTGTGGGCCAGCT 62.320 66.667 6.40 0.00 0.00 4.24
778 1045 4.327680 ACTCAAATTCTTACCTCACCTGC 58.672 43.478 0.00 0.00 0.00 4.85
780 1047 4.322801 CGGACTCAAATTCTTACCTCACCT 60.323 45.833 0.00 0.00 0.00 4.00
782 1049 4.566987 ACGGACTCAAATTCTTACCTCAC 58.433 43.478 0.00 0.00 0.00 3.51
810 1077 0.672401 TCGCCGCTCGAAGGAAAAAT 60.672 50.000 10.46 0.00 45.36 1.82
844 1113 1.766069 CGTGGGTAGCAAACAAAAGC 58.234 50.000 0.00 0.00 0.00 3.51
847 1116 0.382515 GTGCGTGGGTAGCAAACAAA 59.617 50.000 0.00 0.00 46.97 2.83
848 1117 1.777030 CGTGCGTGGGTAGCAAACAA 61.777 55.000 0.00 0.00 46.97 2.83
929 1198 0.470341 GGATTCCTTTCCCTCGGGAG 59.530 60.000 4.63 0.00 46.06 4.30
930 1199 0.252974 TGGATTCCTTTCCCTCGGGA 60.253 55.000 0.00 0.00 43.52 5.14
931 1200 0.181350 CTGGATTCCTTTCCCTCGGG 59.819 60.000 3.95 0.00 34.67 5.14
932 1201 0.464554 GCTGGATTCCTTTCCCTCGG 60.465 60.000 3.95 0.00 34.67 4.63
933 1202 0.253044 TGCTGGATTCCTTTCCCTCG 59.747 55.000 3.95 0.00 34.67 4.63
934 1203 2.373224 CTTGCTGGATTCCTTTCCCTC 58.627 52.381 3.95 0.00 34.67 4.30
935 1204 1.618074 GCTTGCTGGATTCCTTTCCCT 60.618 52.381 3.95 0.00 34.67 4.20
1228 1497 1.394963 GTAAGGTCAGGGGGAGGGA 59.605 63.158 0.00 0.00 0.00 4.20
1239 1508 1.001376 ACCGAGGGAGGGTAAGGTC 59.999 63.158 0.00 0.00 35.58 3.85
1245 1514 4.779733 ATGCGACCGAGGGAGGGT 62.780 66.667 0.00 0.00 41.48 4.34
1285 1559 6.259550 ACAAGCAACCAGACTATTCAATTC 57.740 37.500 0.00 0.00 0.00 2.17
1366 1644 0.534427 CATCCGCCACATCAGAGCAT 60.534 55.000 0.00 0.00 0.00 3.79
1437 1715 1.739067 AATTAACAGAGGCGGCTGAC 58.261 50.000 19.63 1.97 39.20 3.51
1491 1769 7.148239 GGACTACACCAAATTTCAGATGGTAAG 60.148 40.741 0.00 3.24 45.45 2.34
1505 1786 3.678806 GCATCTCATCGGACTACACCAAA 60.679 47.826 0.00 0.00 0.00 3.28
1533 1814 2.083774 TCCGATCAACAATTCACCAGC 58.916 47.619 0.00 0.00 0.00 4.85
1535 1816 7.121907 TCAATTAATCCGATCAACAATTCACCA 59.878 33.333 0.00 0.00 0.00 4.17
1550 1831 9.358872 TCGAATTATGATCTCTCAATTAATCCG 57.641 33.333 0.00 0.00 34.37 4.18
1586 1867 1.134753 TCACACTGGCAGCAACAAAAG 59.865 47.619 15.89 0.00 0.00 2.27
1644 1925 5.474578 TCTTGCAGAACACTCAAGAGTAT 57.525 39.130 1.86 0.00 40.63 2.12
1645 1926 4.937201 TCTTGCAGAACACTCAAGAGTA 57.063 40.909 1.86 0.00 40.63 2.59
1648 1929 3.461061 CACTCTTGCAGAACACTCAAGA 58.539 45.455 0.00 0.00 42.51 3.02
1649 1930 2.547211 CCACTCTTGCAGAACACTCAAG 59.453 50.000 0.00 0.00 38.73 3.02
1650 1931 2.564771 CCACTCTTGCAGAACACTCAA 58.435 47.619 0.00 0.00 0.00 3.02
1772 2053 6.467677 CCATTCTTTAGACCTGTTTCTGAGA 58.532 40.000 0.00 0.00 0.00 3.27
1780 2061 4.202461 TGACTTGCCATTCTTTAGACCTGT 60.202 41.667 0.00 0.00 0.00 4.00
1844 2125 4.003648 ACATCATTCAAAACGGGAGAGTC 58.996 43.478 0.00 0.00 0.00 3.36
1845 2126 4.021102 ACATCATTCAAAACGGGAGAGT 57.979 40.909 0.00 0.00 0.00 3.24
1853 2140 6.917477 TGAAGTGTTGCTACATCATTCAAAAC 59.083 34.615 17.42 0.00 36.50 2.43
1854 2141 7.013178 TCTGAAGTGTTGCTACATCATTCAAAA 59.987 33.333 19.01 12.08 35.52 2.44
1856 2143 5.997129 TCTGAAGTGTTGCTACATCATTCAA 59.003 36.000 19.01 11.95 35.52 2.69
1869 2156 8.143835 ACCCAATTTTAAAGATCTGAAGTGTTG 58.856 33.333 0.00 0.00 0.00 3.33
1950 2238 2.504367 GTACCAGCCAAGTTGTGATGT 58.496 47.619 1.45 0.00 0.00 3.06
1951 2239 1.464608 CGTACCAGCCAAGTTGTGATG 59.535 52.381 1.45 2.65 0.00 3.07
1952 2240 1.610624 CCGTACCAGCCAAGTTGTGAT 60.611 52.381 1.45 0.00 0.00 3.06
1953 2241 0.250124 CCGTACCAGCCAAGTTGTGA 60.250 55.000 1.45 0.00 0.00 3.58
1954 2242 1.234615 CCCGTACCAGCCAAGTTGTG 61.235 60.000 1.45 0.00 0.00 3.33
1996 2284 5.422214 AGTGGGGATCAACTACTTAAGTG 57.578 43.478 18.56 10.41 38.88 3.16
2020 2308 8.376889 TGCGTGCATATTGAGATAAATAGAAA 57.623 30.769 0.00 0.00 0.00 2.52
2043 2331 2.182842 GGTCGATGAGGTGGCATGC 61.183 63.158 9.90 9.90 0.00 4.06
2086 2375 2.745821 GCACTTCTCATGCATGTTGAGA 59.254 45.455 25.43 19.08 45.93 3.27
2087 2376 2.747989 AGCACTTCTCATGCATGTTGAG 59.252 45.455 25.43 20.94 45.92 3.02
2123 2412 8.517056 CGGGTGTAAAGGTAGAACAATAAAATT 58.483 33.333 0.00 0.00 0.00 1.82
2185 2842 7.394923 TCTCAAGAACCTAGAACCTAGAAGAAG 59.605 40.741 2.77 0.00 0.00 2.85
2335 2992 5.760253 TCAACTGTTTCAAGAGGAACATCTC 59.240 40.000 0.00 0.00 34.56 2.75
2523 3180 2.932261 ACCAACTCTCAGAAAACCCAC 58.068 47.619 0.00 0.00 0.00 4.61
2546 3203 5.962433 AGAAAATTCATGTGCCTGATGAAG 58.038 37.500 0.00 0.00 41.83 3.02
2617 3278 3.195825 GTGTAGTCTGCCATACACTTCCT 59.804 47.826 7.95 0.00 45.33 3.36
2685 3355 3.745799 TGGCTACGTTTTCCAGATTCAA 58.254 40.909 0.00 0.00 0.00 2.69
2703 3373 4.634199 TGTACCACTACTACAAACTTGGC 58.366 43.478 0.00 0.00 0.00 4.52
2776 3446 3.900941 AGATCAAACACCATTCAAACGC 58.099 40.909 0.00 0.00 0.00 4.84
2845 3515 6.351626 GCAGGATGGAAGAAAAATCAGGAAAT 60.352 38.462 0.00 0.00 35.86 2.17
2871 3541 8.626526 ACGGTTTGAGAAAACAAATGTATACTT 58.373 29.630 4.17 0.00 40.91 2.24
2879 3549 6.816140 ACAATGAACGGTTTGAGAAAACAAAT 59.184 30.769 0.00 0.00 40.91 2.32
2891 3561 7.976734 TGAAAGAACATAAACAATGAACGGTTT 59.023 29.630 0.00 0.00 39.07 3.27
2925 3595 2.226437 CCAAACGGAACAGATGAACCTG 59.774 50.000 0.00 0.00 39.93 4.00
2952 3622 6.291377 AGCTATCAATACCACCACATTAGTG 58.709 40.000 0.00 0.00 45.47 2.74
3028 3755 5.412594 CCAACTCAGCAGCACTAATAAGAAA 59.587 40.000 0.00 0.00 0.00 2.52
3034 3761 2.816087 CAACCAACTCAGCAGCACTAAT 59.184 45.455 0.00 0.00 0.00 1.73
3162 3889 3.261580 CCGAAATTCCAGGCCAAAATTC 58.738 45.455 5.01 4.47 0.00 2.17
3228 3998 4.884164 CGGCAAAGGAAGGAATTCTTATCT 59.116 41.667 5.23 0.00 35.50 1.98
3259 4029 8.651389 TCCAGTTCTATTAACCTGATTCCTATG 58.349 37.037 0.00 0.00 0.00 2.23
3332 4102 6.431234 GGAAAGAAAAAGCTATCACAGAGGAA 59.569 38.462 0.00 0.00 0.00 3.36
3333 4103 5.940470 GGAAAGAAAAAGCTATCACAGAGGA 59.060 40.000 0.00 0.00 0.00 3.71
3334 4104 5.163814 CGGAAAGAAAAAGCTATCACAGAGG 60.164 44.000 0.00 0.00 0.00 3.69
3335 4105 5.639506 TCGGAAAGAAAAAGCTATCACAGAG 59.360 40.000 0.00 0.00 0.00 3.35
3336 4106 5.547465 TCGGAAAGAAAAAGCTATCACAGA 58.453 37.500 0.00 0.00 0.00 3.41
3337 4107 5.862924 TCGGAAAGAAAAAGCTATCACAG 57.137 39.130 0.00 0.00 0.00 3.66
3338 4108 6.817765 ATTCGGAAAGAAAAAGCTATCACA 57.182 33.333 0.00 0.00 42.91 3.58
3339 4109 7.975750 ACTATTCGGAAAGAAAAAGCTATCAC 58.024 34.615 0.00 0.00 42.91 3.06
3340 4110 8.561738 AACTATTCGGAAAGAAAAAGCTATCA 57.438 30.769 0.00 0.00 42.91 2.15
3341 4111 8.123575 GGAACTATTCGGAAAGAAAAAGCTATC 58.876 37.037 0.00 0.00 42.91 2.08
3342 4112 7.067129 GGGAACTATTCGGAAAGAAAAAGCTAT 59.933 37.037 0.00 0.00 42.91 2.97
3343 4113 6.373495 GGGAACTATTCGGAAAGAAAAAGCTA 59.627 38.462 0.00 0.00 42.91 3.32
3344 4114 5.183331 GGGAACTATTCGGAAAGAAAAAGCT 59.817 40.000 0.00 0.00 42.91 3.74
3345 4115 5.048294 TGGGAACTATTCGGAAAGAAAAAGC 60.048 40.000 0.00 0.00 42.91 3.51
3346 4116 6.569179 TGGGAACTATTCGGAAAGAAAAAG 57.431 37.500 0.00 0.00 42.91 2.27
3347 4117 6.492087 ACATGGGAACTATTCGGAAAGAAAAA 59.508 34.615 0.00 0.00 42.91 1.94
3348 4118 6.007703 ACATGGGAACTATTCGGAAAGAAAA 58.992 36.000 0.00 0.00 42.91 2.29
3349 4119 5.414454 CACATGGGAACTATTCGGAAAGAAA 59.586 40.000 0.00 0.00 42.91 2.52
3350 4120 4.941263 CACATGGGAACTATTCGGAAAGAA 59.059 41.667 0.00 0.00 43.93 2.52
3351 4121 4.224147 TCACATGGGAACTATTCGGAAAGA 59.776 41.667 0.00 0.00 0.00 2.52
3352 4122 4.513442 TCACATGGGAACTATTCGGAAAG 58.487 43.478 0.00 0.00 0.00 2.62
3353 4123 4.561500 TCACATGGGAACTATTCGGAAA 57.438 40.909 0.00 0.00 0.00 3.13
3354 4124 4.771114 ATCACATGGGAACTATTCGGAA 57.229 40.909 0.00 0.00 0.00 4.30
3355 4125 4.262463 GCTATCACATGGGAACTATTCGGA 60.262 45.833 0.00 0.00 0.00 4.55
3356 4126 3.997021 GCTATCACATGGGAACTATTCGG 59.003 47.826 0.00 0.00 0.00 4.30
3357 4127 4.887748 AGCTATCACATGGGAACTATTCG 58.112 43.478 0.00 0.00 0.00 3.34
3358 4128 5.012561 AGGAGCTATCACATGGGAACTATTC 59.987 44.000 0.00 0.00 0.00 1.75
3359 4129 4.910304 AGGAGCTATCACATGGGAACTATT 59.090 41.667 0.00 0.00 0.00 1.73
3360 4130 4.285517 CAGGAGCTATCACATGGGAACTAT 59.714 45.833 0.00 0.00 0.00 2.12
3361 4131 3.643320 CAGGAGCTATCACATGGGAACTA 59.357 47.826 0.00 0.00 0.00 2.24
3362 4132 2.437281 CAGGAGCTATCACATGGGAACT 59.563 50.000 0.00 0.00 0.00 3.01
3363 4133 2.171448 ACAGGAGCTATCACATGGGAAC 59.829 50.000 0.00 0.00 0.00 3.62
3398 4168 4.672899 ACCCAACTGTAACATAGCCAATT 58.327 39.130 0.00 0.00 0.00 2.32
3399 4169 4.316025 ACCCAACTGTAACATAGCCAAT 57.684 40.909 0.00 0.00 0.00 3.16
3408 4178 3.824443 AGGTGCAATAACCCAACTGTAAC 59.176 43.478 0.00 0.00 41.54 2.50
3410 4180 3.799432 AGGTGCAATAACCCAACTGTA 57.201 42.857 0.00 0.00 41.54 2.74
3415 4185 5.575157 TGAGAAATAGGTGCAATAACCCAA 58.425 37.500 0.00 0.00 41.54 4.12
3428 4198 8.090831 TGCATTATGCTAGTACTGAGAAATAGG 58.909 37.037 18.44 0.00 45.31 2.57
3496 4268 5.989168 TCCATTGGTTGTATACTGCTAATCG 59.011 40.000 4.17 0.71 0.00 3.34
3675 4451 0.735978 CCTCGAAGCGCACACATGTA 60.736 55.000 11.47 0.00 0.00 2.29
3690 4466 3.976701 ATGCCGTTGGGAAGCCTCG 62.977 63.158 0.00 0.00 34.06 4.63
3773 4551 1.152649 ACTCCCCATTCCATCCCATC 58.847 55.000 0.00 0.00 0.00 3.51
3774 4552 0.855598 CACTCCCCATTCCATCCCAT 59.144 55.000 0.00 0.00 0.00 4.00
3812 4599 1.652947 TCTAGAACCAACCAGACCCC 58.347 55.000 0.00 0.00 0.00 4.95
3819 4606 3.181450 CCCTCATCCATCTAGAACCAACC 60.181 52.174 0.00 0.00 0.00 3.77
3858 4645 1.209747 GGGAGCGGTAAGTTCAATCCT 59.790 52.381 0.00 0.00 0.00 3.24
3919 4706 7.073342 AGACTACAAACAGTTGTTCAAACTC 57.927 36.000 0.00 0.00 46.01 3.01
3967 4755 9.630098 CTGTGCTTTGAAGACAAATGTTAATAT 57.370 29.630 0.00 0.00 43.64 1.28
3977 4765 0.662619 CCGCTGTGCTTTGAAGACAA 59.337 50.000 0.00 0.00 0.00 3.18
4015 4803 3.664107 TGAAGTAAGCACTACAGCCTTG 58.336 45.455 0.00 0.00 33.48 3.61
4243 5031 2.632028 CTCCCATACTCTCACCAGATGG 59.368 54.545 0.00 0.00 42.17 3.51
4389 5177 1.949465 ACCGAAAGAAGCTTGTTCGT 58.051 45.000 27.36 18.25 41.91 3.85
4390 5178 3.334272 AAACCGAAAGAAGCTTGTTCG 57.666 42.857 24.83 24.83 42.85 3.95
4397 5185 7.088272 ACAATAACCAATAAACCGAAAGAAGC 58.912 34.615 0.00 0.00 0.00 3.86
4464 5252 1.565067 TTTAGGAACGGAGGGAGTCC 58.435 55.000 0.00 0.00 42.85 3.85
4465 5253 6.267242 ACTTATATTTAGGAACGGAGGGAGTC 59.733 42.308 0.00 0.00 0.00 3.36
4466 5254 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
4467 5255 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
4468 5256 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
4469 5257 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
4470 5258 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
4471 5259 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
4487 5275 8.816894 TCCATAGTGAAATCTCTACAAAGACTT 58.183 33.333 0.00 0.00 0.00 3.01
4488 5276 8.254508 GTCCATAGTGAAATCTCTACAAAGACT 58.745 37.037 0.00 0.00 0.00 3.24
4489 5277 8.254508 AGTCCATAGTGAAATCTCTACAAAGAC 58.745 37.037 0.00 0.00 0.00 3.01
4490 5278 8.367660 AGTCCATAGTGAAATCTCTACAAAGA 57.632 34.615 0.00 0.00 0.00 2.52
4491 5279 9.522804 GTAGTCCATAGTGAAATCTCTACAAAG 57.477 37.037 0.00 0.00 0.00 2.77
4492 5280 9.031537 TGTAGTCCATAGTGAAATCTCTACAAA 57.968 33.333 0.00 0.00 34.46 2.83
4493 5281 8.589701 TGTAGTCCATAGTGAAATCTCTACAA 57.410 34.615 0.00 0.00 34.46 2.41
4494 5282 8.768501 ATGTAGTCCATAGTGAAATCTCTACA 57.231 34.615 0.00 0.00 39.19 2.74
4496 5284 9.000486 CGTATGTAGTCCATAGTGAAATCTCTA 58.000 37.037 0.00 0.00 36.71 2.43
4497 5285 7.040340 CCGTATGTAGTCCATAGTGAAATCTCT 60.040 40.741 0.00 0.00 36.71 3.10
4498 5286 7.040617 TCCGTATGTAGTCCATAGTGAAATCTC 60.041 40.741 0.00 0.00 36.71 2.75
4499 5287 6.776116 TCCGTATGTAGTCCATAGTGAAATCT 59.224 38.462 0.00 0.00 36.71 2.40
4500 5288 6.978338 TCCGTATGTAGTCCATAGTGAAATC 58.022 40.000 0.00 0.00 36.71 2.17
4501 5289 6.516860 GCTCCGTATGTAGTCCATAGTGAAAT 60.517 42.308 0.00 0.00 36.71 2.17
4502 5290 5.221185 GCTCCGTATGTAGTCCATAGTGAAA 60.221 44.000 0.00 0.00 36.71 2.69
4503 5291 4.277672 GCTCCGTATGTAGTCCATAGTGAA 59.722 45.833 0.00 0.00 36.71 3.18
4504 5292 3.819337 GCTCCGTATGTAGTCCATAGTGA 59.181 47.826 0.00 0.00 36.71 3.41
4505 5293 3.568430 TGCTCCGTATGTAGTCCATAGTG 59.432 47.826 0.00 0.00 36.71 2.74
4506 5294 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
4507 5295 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
4508 5296 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
4509 5297 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
4510 5298 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
4511 5299 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
4512 5300 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
4513 5301 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
4514 5302 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
4515 5303 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
4516 5304 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
4517 5305 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
4518 5306 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
4519 5307 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
4520 5308 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
4521 5309 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
4522 5310 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
4523 5311 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
4524 5312 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
4530 5318 9.399797 TGCATTTTAGAGTGTAGATTCATTCAT 57.600 29.630 0.00 0.00 0.00 2.57
4531 5319 8.791327 TGCATTTTAGAGTGTAGATTCATTCA 57.209 30.769 0.00 0.00 0.00 2.57
4532 5320 9.875675 GATGCATTTTAGAGTGTAGATTCATTC 57.124 33.333 0.00 0.00 0.00 2.67
4533 5321 9.624373 AGATGCATTTTAGAGTGTAGATTCATT 57.376 29.630 0.00 0.00 0.00 2.57
4535 5323 9.534565 GTAGATGCATTTTAGAGTGTAGATTCA 57.465 33.333 0.00 0.00 0.00 2.57
4536 5324 9.534565 TGTAGATGCATTTTAGAGTGTAGATTC 57.465 33.333 0.00 0.00 0.00 2.52
4539 5327 9.967346 GTATGTAGATGCATTTTAGAGTGTAGA 57.033 33.333 0.00 0.00 0.00 2.59
4540 5328 9.750125 TGTATGTAGATGCATTTTAGAGTGTAG 57.250 33.333 0.00 0.00 0.00 2.74
4544 5332 9.411801 CGTATGTATGTAGATGCATTTTAGAGT 57.588 33.333 8.70 0.00 36.43 3.24
4545 5333 9.411801 ACGTATGTATGTAGATGCATTTTAGAG 57.588 33.333 8.70 0.00 36.43 2.43
4562 5350 7.231925 TCCACTATGAACCACATACGTATGTAT 59.768 37.037 34.24 26.12 44.57 2.29
4563 5351 6.546772 TCCACTATGAACCACATACGTATGTA 59.453 38.462 34.24 22.07 44.57 2.29
4565 5353 5.838529 TCCACTATGAACCACATACGTATG 58.161 41.667 29.48 29.48 40.07 2.39
4566 5354 6.474140 TTCCACTATGAACCACATACGTAT 57.526 37.500 1.14 1.14 40.07 3.06
4567 5355 5.918426 TTCCACTATGAACCACATACGTA 57.082 39.130 0.00 0.00 40.07 3.57
4568 5356 4.811969 TTCCACTATGAACCACATACGT 57.188 40.909 0.00 0.00 40.07 3.57
4569 5357 5.601662 AGATTCCACTATGAACCACATACG 58.398 41.667 0.00 0.00 40.07 3.06
4570 5358 6.821388 AGAGATTCCACTATGAACCACATAC 58.179 40.000 0.00 0.00 40.07 2.39
4571 5359 6.042093 GGAGAGATTCCACTATGAACCACATA 59.958 42.308 0.00 0.00 46.01 2.29
4572 5360 5.163258 GGAGAGATTCCACTATGAACCACAT 60.163 44.000 0.00 0.00 46.01 3.21
4573 5361 4.162320 GGAGAGATTCCACTATGAACCACA 59.838 45.833 0.00 0.00 46.01 4.17
4574 5362 4.698575 GGAGAGATTCCACTATGAACCAC 58.301 47.826 0.00 0.00 46.01 4.16
4591 5379 9.250624 CGTTCCTAAATATAAGTCTTTGGAGAG 57.749 37.037 0.00 0.00 31.07 3.20
4592 5380 8.202137 CCGTTCCTAAATATAAGTCTTTGGAGA 58.798 37.037 0.00 0.00 0.00 3.71
4593 5381 8.202137 TCCGTTCCTAAATATAAGTCTTTGGAG 58.798 37.037 0.00 0.00 0.00 3.86
4594 5382 8.081517 TCCGTTCCTAAATATAAGTCTTTGGA 57.918 34.615 0.00 0.00 0.00 3.53
4595 5383 7.441458 CCTCCGTTCCTAAATATAAGTCTTTGG 59.559 40.741 0.00 0.00 0.00 3.28
4596 5384 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
4597 5385 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
4598 5386 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
4599 5387 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
4600 5388 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
4601 5389 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
4602 5390 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
4603 5391 7.951806 TCATACTCCCTCCGTTCCTAAATATAA 59.048 37.037 0.00 0.00 0.00 0.98
4604 5392 7.472741 TCATACTCCCTCCGTTCCTAAATATA 58.527 38.462 0.00 0.00 0.00 0.86
4605 5393 6.320518 TCATACTCCCTCCGTTCCTAAATAT 58.679 40.000 0.00 0.00 0.00 1.28
4606 5394 5.708544 TCATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
4607 5395 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
4608 5396 3.985127 TCATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
4609 5397 3.675348 TCATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
4610 5398 3.897657 ATCATACTCCCTCCGTTCCTA 57.102 47.619 0.00 0.00 0.00 2.94
4611 5399 2.777459 ATCATACTCCCTCCGTTCCT 57.223 50.000 0.00 0.00 0.00 3.36
4612 5400 3.840124 AAATCATACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
4613 5401 4.514401 ACAAAATCATACTCCCTCCGTTC 58.486 43.478 0.00 0.00 0.00 3.95
4614 5402 4.569719 ACAAAATCATACTCCCTCCGTT 57.430 40.909 0.00 0.00 0.00 4.44
4615 5403 4.569719 AACAAAATCATACTCCCTCCGT 57.430 40.909 0.00 0.00 0.00 4.69
4616 5404 7.568199 AATAAACAAAATCATACTCCCTCCG 57.432 36.000 0.00 0.00 0.00 4.63
4617 5405 8.847196 GGTAATAAACAAAATCATACTCCCTCC 58.153 37.037 0.00 0.00 0.00 4.30
4618 5406 9.403583 TGGTAATAAACAAAATCATACTCCCTC 57.596 33.333 0.00 0.00 0.00 4.30
4619 5407 9.936329 ATGGTAATAAACAAAATCATACTCCCT 57.064 29.630 0.00 0.00 0.00 4.20
4620 5408 9.965824 CATGGTAATAAACAAAATCATACTCCC 57.034 33.333 0.00 0.00 0.00 4.30
4621 5409 9.463443 GCATGGTAATAAACAAAATCATACTCC 57.537 33.333 0.00 0.00 0.00 3.85
4622 5410 9.463443 GGCATGGTAATAAACAAAATCATACTC 57.537 33.333 0.00 0.00 0.00 2.59
4711 5500 9.539825 GATCAACAGTCATTTACAGACATAGAT 57.460 33.333 0.00 0.00 38.46 1.98
4712 5501 8.531146 TGATCAACAGTCATTTACAGACATAGA 58.469 33.333 0.00 0.00 38.46 1.98
4713 5502 8.707938 TGATCAACAGTCATTTACAGACATAG 57.292 34.615 0.00 0.00 38.46 2.23
4714 5503 9.500785 TTTGATCAACAGTCATTTACAGACATA 57.499 29.630 7.89 0.00 38.46 2.29
4715 5504 7.984422 TTGATCAACAGTCATTTACAGACAT 57.016 32.000 3.38 0.00 38.46 3.06
4716 5505 7.800155 TTTGATCAACAGTCATTTACAGACA 57.200 32.000 7.89 0.00 38.46 3.41
4758 5547 8.474025 GCCTAACAAGATAGATATATGCAGACT 58.526 37.037 0.00 0.00 0.00 3.24
4759 5548 7.708752 GGCCTAACAAGATAGATATATGCAGAC 59.291 40.741 0.00 0.00 0.00 3.51
4760 5549 7.147655 GGGCCTAACAAGATAGATATATGCAGA 60.148 40.741 0.84 0.00 0.00 4.26
4761 5550 6.989169 GGGCCTAACAAGATAGATATATGCAG 59.011 42.308 0.84 0.00 0.00 4.41
4762 5551 6.406961 CGGGCCTAACAAGATAGATATATGCA 60.407 42.308 0.84 0.00 0.00 3.96
4763 5552 5.986135 CGGGCCTAACAAGATAGATATATGC 59.014 44.000 0.84 0.00 0.00 3.14
4764 5553 6.980978 CACGGGCCTAACAAGATAGATATATG 59.019 42.308 0.84 0.00 0.00 1.78
4802 5591 0.108945 GTTCCAATGGCAGCAGAAGC 60.109 55.000 0.00 0.00 42.56 3.86
4992 5782 9.135843 ACTTAAGAACTTTACAACAACAAAAGC 57.864 29.630 10.09 0.00 34.31 3.51
5064 5854 6.253512 GCCACAAAATAATCAACGAGGATTTC 59.746 38.462 10.59 0.00 38.41 2.17
5072 5862 5.639757 TCATCAGCCACAAAATAATCAACG 58.360 37.500 0.00 0.00 0.00 4.10
5079 5869 6.904463 ATGCATATCATCAGCCACAAAATA 57.096 33.333 0.00 0.00 0.00 1.40
5294 6335 1.202879 TGGGGTTTGTACCAAGAGCAG 60.203 52.381 0.00 0.00 46.96 4.24
5363 6404 2.362736 CACAACAGCTAGTCATGCCAT 58.637 47.619 0.00 0.00 0.00 4.40
5364 6405 1.812235 CACAACAGCTAGTCATGCCA 58.188 50.000 0.00 0.00 0.00 4.92
5365 6406 0.449388 GCACAACAGCTAGTCATGCC 59.551 55.000 10.79 0.00 35.85 4.40
5366 6407 1.135859 GTGCACAACAGCTAGTCATGC 60.136 52.381 13.17 13.21 39.94 4.06
5367 6408 2.145536 TGTGCACAACAGCTAGTCATG 58.854 47.619 19.28 0.00 33.78 3.07
5368 6409 2.549064 TGTGCACAACAGCTAGTCAT 57.451 45.000 19.28 0.00 33.78 3.06
5418 6459 0.253044 GGATAGCCTCTTGCACACCA 59.747 55.000 0.00 0.00 44.83 4.17
5487 6528 3.020984 CTCTACTGGTGGAGGAGACTTC 58.979 54.545 6.26 0.00 44.43 3.01
5683 6724 4.074970 ACTAGTTGGCCATGAACAGAAAG 58.925 43.478 6.09 1.46 0.00 2.62
5684 6725 3.820467 CACTAGTTGGCCATGAACAGAAA 59.180 43.478 6.09 0.00 0.00 2.52
5685 6726 3.072330 TCACTAGTTGGCCATGAACAGAA 59.928 43.478 6.09 0.00 0.00 3.02
5686 6727 2.637382 TCACTAGTTGGCCATGAACAGA 59.363 45.455 6.09 0.00 0.00 3.41
5687 6728 3.057969 TCACTAGTTGGCCATGAACAG 57.942 47.619 6.09 5.19 0.00 3.16
5701 6742 5.326120 CAGAATGCAATGTCGATCACTAG 57.674 43.478 0.00 0.00 0.00 2.57
5756 6797 3.297736 CTCTAACCGGTATTCCAGACCT 58.702 50.000 8.00 0.00 34.56 3.85
6097 7138 2.200067 CCACGAGATTAGCAGCAAGAG 58.800 52.381 0.00 0.00 0.00 2.85
6242 7283 3.041211 AGAGCTGTGATATAACAGGGCA 58.959 45.455 19.99 0.00 46.34 5.36
6269 7310 5.568620 ACTTACCTTCATCAAGAACCACT 57.431 39.130 0.00 0.00 31.61 4.00
6270 7311 6.369065 CACTACTTACCTTCATCAAGAACCAC 59.631 42.308 0.00 0.00 31.61 4.16
6402 7485 8.978564 ATTTCTATGCTAGATACATCTGTTCG 57.021 34.615 1.88 0.00 37.76 3.95
6434 7517 9.896645 AAACAGATGTATCAGAACACATTATCT 57.103 29.630 3.22 0.00 35.55 1.98
6435 7518 9.926751 CAAACAGATGTATCAGAACACATTATC 57.073 33.333 3.22 0.00 35.55 1.75
6436 7519 9.671279 TCAAACAGATGTATCAGAACACATTAT 57.329 29.630 3.22 0.00 35.55 1.28
6437 7520 9.500785 TTCAAACAGATGTATCAGAACACATTA 57.499 29.630 3.22 0.00 35.55 1.90
6438 7521 7.984422 TCAAACAGATGTATCAGAACACATT 57.016 32.000 3.22 0.00 35.55 2.71
6439 7522 7.984422 TTCAAACAGATGTATCAGAACACAT 57.016 32.000 1.51 1.51 38.08 3.21
6440 7523 7.879677 AGATTCAAACAGATGTATCAGAACACA 59.120 33.333 0.00 0.00 31.65 3.72
6441 7524 8.173775 CAGATTCAAACAGATGTATCAGAACAC 58.826 37.037 0.00 0.00 31.65 3.32
6442 7525 7.148356 GCAGATTCAAACAGATGTATCAGAACA 60.148 37.037 0.00 0.00 31.65 3.18
6443 7526 7.065563 AGCAGATTCAAACAGATGTATCAGAAC 59.934 37.037 0.00 0.00 31.65 3.01
6444 7527 7.108194 AGCAGATTCAAACAGATGTATCAGAA 58.892 34.615 0.00 0.00 31.65 3.02
6445 7528 6.647229 AGCAGATTCAAACAGATGTATCAGA 58.353 36.000 0.00 0.00 31.65 3.27
6446 7529 6.292221 CGAGCAGATTCAAACAGATGTATCAG 60.292 42.308 0.00 0.00 31.65 2.90
6447 7530 5.521372 CGAGCAGATTCAAACAGATGTATCA 59.479 40.000 0.00 0.00 31.65 2.15
6448 7531 5.750547 TCGAGCAGATTCAAACAGATGTATC 59.249 40.000 0.00 0.00 0.00 2.24
6449 7532 5.664457 TCGAGCAGATTCAAACAGATGTAT 58.336 37.500 0.00 0.00 0.00 2.29
6450 7533 5.072040 TCGAGCAGATTCAAACAGATGTA 57.928 39.130 0.00 0.00 0.00 2.29
6451 7534 3.930336 TCGAGCAGATTCAAACAGATGT 58.070 40.909 0.00 0.00 0.00 3.06
6452 7535 4.152938 TGTTCGAGCAGATTCAAACAGATG 59.847 41.667 0.00 0.00 0.00 2.90
6453 7536 4.318332 TGTTCGAGCAGATTCAAACAGAT 58.682 39.130 0.00 0.00 0.00 2.90
6454 7537 3.727726 TGTTCGAGCAGATTCAAACAGA 58.272 40.909 0.00 0.00 0.00 3.41
6455 7538 3.742882 TCTGTTCGAGCAGATTCAAACAG 59.257 43.478 25.80 13.16 42.98 3.16
6456 7539 3.727726 TCTGTTCGAGCAGATTCAAACA 58.272 40.909 25.80 3.52 40.23 2.83
6465 7548 4.225984 GCTAGATACATCTGTTCGAGCAG 58.774 47.826 21.93 21.93 37.76 4.24
6507 7590 8.413229 CCTTTCCATATTATGTTCAAACGGATT 58.587 33.333 3.10 0.00 0.00 3.01
6512 7595 6.609616 TCCCCCTTTCCATATTATGTTCAAAC 59.390 38.462 3.10 0.00 0.00 2.93
6514 7597 6.348478 TCCCCCTTTCCATATTATGTTCAA 57.652 37.500 3.10 0.00 0.00 2.69
6521 7604 8.246615 ACTATCTACTTCCCCCTTTCCATATTA 58.753 37.037 0.00 0.00 0.00 0.98
6531 7614 4.533001 ACGTAACTATCTACTTCCCCCT 57.467 45.455 0.00 0.00 0.00 4.79
6533 7693 7.176340 ACATCATACGTAACTATCTACTTCCCC 59.824 40.741 0.00 0.00 0.00 4.81
6534 7694 8.108551 ACATCATACGTAACTATCTACTTCCC 57.891 38.462 0.00 0.00 0.00 3.97
6611 7771 8.985315 AAATGGTAGATGTATGTTGTCATCAT 57.015 30.769 7.68 2.10 41.74 2.45
6678 7839 7.341805 AGAAGCTCCTAAATAGATGCTTTTGA 58.658 34.615 15.57 0.00 39.66 2.69
6679 7840 7.565323 AGAAGCTCCTAAATAGATGCTTTTG 57.435 36.000 15.57 0.00 39.66 2.44
6695 7856 3.010420 ACGAAAAAGCCATAGAAGCTCC 58.990 45.455 0.00 0.00 40.49 4.70
6702 7863 4.215399 TCCACTTTGACGAAAAAGCCATAG 59.785 41.667 12.43 0.00 40.20 2.23
6707 7868 4.259810 GCTTTTCCACTTTGACGAAAAAGC 60.260 41.667 12.76 12.76 40.20 3.51
6714 7875 1.065401 TGCAGCTTTTCCACTTTGACG 59.935 47.619 0.00 0.00 0.00 4.35
6720 7881 2.229675 GCTTTTGCAGCTTTTCCACT 57.770 45.000 0.00 0.00 46.27 4.00
6751 7912 3.888930 CTCTAAGGCCTTGTTTGTTTGGA 59.111 43.478 28.77 5.45 0.00 3.53
6752 7913 3.552890 GCTCTAAGGCCTTGTTTGTTTGG 60.553 47.826 28.77 0.41 0.00 3.28
6761 7922 1.487976 TGGAGATGCTCTAAGGCCTTG 59.512 52.381 28.77 17.30 0.00 3.61
6763 7924 1.885049 TTGGAGATGCTCTAAGGCCT 58.115 50.000 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.