Multiple sequence alignment - TraesCS4B01G075400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G075400 chr4B 100.000 4217 0 0 2602 6818 71348746 71344530 0.000000e+00 7788.0
1 TraesCS4B01G075400 chr4B 100.000 2382 0 0 1 2382 71351347 71348966 0.000000e+00 4399.0
2 TraesCS4B01G075400 chr4B 88.816 152 14 1 5006 5154 178080976 178080825 4.200000e-42 183.0
3 TraesCS4B01G075400 chr4B 84.000 100 14 2 4841 4940 362144231 362144134 2.020000e-15 95.3
4 TraesCS4B01G075400 chr4A 92.807 2266 116 25 127 2360 548773699 548775949 0.000000e+00 3238.0
5 TraesCS4B01G075400 chr4A 89.481 2139 120 36 2701 4801 548776308 548778379 0.000000e+00 2606.0
6 TraesCS4B01G075400 chr4A 92.139 1412 75 18 5424 6818 548778654 548780046 0.000000e+00 1960.0
7 TraesCS4B01G075400 chr4A 88.816 152 13 2 5006 5154 137187147 137186997 4.200000e-42 183.0
8 TraesCS4B01G075400 chr4A 93.333 105 6 1 6 110 548773610 548773713 3.290000e-33 154.0
9 TraesCS4B01G075400 chr4A 79.439 107 12 9 4903 5001 467252382 467252486 4.410000e-07 67.6
10 TraesCS4B01G075400 chr4A 94.737 38 0 2 5391 5428 683432901 683432936 2.660000e-04 58.4
11 TraesCS4B01G075400 chr4D 93.408 2063 93 23 2602 4645 48602460 48600422 0.000000e+00 3016.0
12 TraesCS4B01G075400 chr4D 95.560 1554 61 5 827 2378 48604016 48602469 0.000000e+00 2481.0
13 TraesCS4B01G075400 chr4D 95.552 652 25 2 6051 6698 48599394 48598743 0.000000e+00 1040.0
14 TraesCS4B01G075400 chr4D 92.840 419 23 5 1 419 48605202 48604791 9.780000e-168 601.0
15 TraesCS4B01G075400 chr4D 84.818 606 52 23 5424 5997 48600162 48599565 2.130000e-159 573.0
16 TraesCS4B01G075400 chr4D 80.568 458 49 21 432 852 48604487 48604033 3.970000e-82 316.0
17 TraesCS4B01G075400 chr4D 95.000 120 6 0 6699 6818 48598518 48598399 9.030000e-44 189.0
18 TraesCS4B01G075400 chr4D 91.026 78 7 0 5228 5305 48600244 48600167 9.350000e-19 106.0
19 TraesCS4B01G075400 chr4D 85.000 100 13 2 4841 4940 294346470 294346373 4.350000e-17 100.0
20 TraesCS4B01G075400 chr3D 89.542 153 13 1 5006 5155 170546950 170547102 2.510000e-44 191.0
21 TraesCS4B01G075400 chr3D 84.211 152 23 1 4851 5001 178651821 178651972 5.510000e-31 147.0
22 TraesCS4B01G075400 chr3D 96.875 32 0 1 5392 5423 547914862 547914832 1.200000e-02 52.8
23 TraesCS4B01G075400 chr6A 90.845 142 11 1 5006 5145 184388178 184388319 9.030000e-44 189.0
24 TraesCS4B01G075400 chr3B 89.103 156 12 3 5006 5159 383704479 383704327 9.030000e-44 189.0
25 TraesCS4B01G075400 chr3B 83.553 152 24 1 4851 5001 257098951 257099102 2.560000e-29 141.0
26 TraesCS4B01G075400 chr3B 96.875 32 1 0 5401 5432 474402064 474402095 3.000000e-03 54.7
27 TraesCS4B01G075400 chr7B 88.889 153 15 1 5006 5156 86331661 86331509 3.250000e-43 187.0
28 TraesCS4B01G075400 chr7B 81.818 77 10 3 4924 4998 660244862 660244936 2.050000e-05 62.1
29 TraesCS4B01G075400 chr1B 88.608 158 13 4 5006 5159 424083914 424083758 3.250000e-43 187.0
30 TraesCS4B01G075400 chr1B 82.468 154 26 1 4851 5004 174110160 174110008 4.290000e-27 134.0
31 TraesCS4B01G075400 chr2D 88.535 157 13 3 5006 5157 194453243 194453087 1.170000e-42 185.0
32 TraesCS4B01G075400 chr2D 94.595 37 0 2 5392 5428 514950084 514950050 1.000000e-03 56.5
33 TraesCS4B01G075400 chr2D 96.774 31 1 0 5401 5431 355684855 355684825 1.200000e-02 52.8
34 TraesCS4B01G075400 chr6D 89.189 148 13 2 5006 5151 127200660 127200806 1.510000e-41 182.0
35 TraesCS4B01G075400 chr6D 83.505 97 15 1 4841 4936 310399520 310399616 9.420000e-14 89.8
36 TraesCS4B01G075400 chr6D 96.774 31 1 0 5401 5431 14166090 14166060 1.200000e-02 52.8
37 TraesCS4B01G075400 chr5D 82.209 163 25 2 4841 5001 267617436 267617596 3.320000e-28 137.0
38 TraesCS4B01G075400 chr2A 81.410 156 27 2 4843 4998 281755141 281755294 7.180000e-25 126.0
39 TraesCS4B01G075400 chr2A 100.000 29 0 0 5395 5423 645314674 645314646 3.000000e-03 54.7
40 TraesCS4B01G075400 chr3A 73.653 167 39 4 4838 5000 681462782 681462947 7.380000e-05 60.2
41 TraesCS4B01G075400 chr1D 94.595 37 2 0 4963 4999 150940221 150940185 2.660000e-04 58.4
42 TraesCS4B01G075400 chr7D 100.000 28 0 0 5401 5428 60588906 60588933 1.200000e-02 52.8
43 TraesCS4B01G075400 chr6B 96.875 32 0 1 5396 5426 698096454 698096485 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G075400 chr4B 71344530 71351347 6817 True 6093.50 7788 100.0000 1 6818 2 chr4B.!!$R3 6817
1 TraesCS4B01G075400 chr4A 548773610 548780046 6436 False 1989.50 3238 91.9400 6 6818 4 chr4A.!!$F3 6812
2 TraesCS4B01G075400 chr4D 48598399 48605202 6803 True 1040.25 3016 91.0965 1 6818 8 chr4D.!!$R2 6817

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
864 1231 0.038892 CTGCTGCTGCGGTTTTTCAT 60.039 50.0 15.76 0.0 43.34 2.57 F
867 1234 0.109132 CTGCTGCGGTTTTTCATCCC 60.109 55.0 0.00 0.0 0.00 3.85 F
2112 2480 0.478072 ACCCTGAACACCAGCATGAA 59.522 50.0 0.00 0.0 41.57 2.57 F
2941 3601 0.324738 ACCTCCCTGAATGAGCGAGA 60.325 55.0 0.00 0.0 0.00 4.04 F
4528 5226 0.034616 AATCTGCGCTCCATAGAGGC 59.965 55.0 9.73 0.0 40.79 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2022 2390 0.801251 CACTTAGACAAGCAGGCAGC 59.199 55.0 0.00 0.0 46.19 5.25 R
2669 3039 1.207488 ATGGGCTGGCTAACTCCACA 61.207 55.0 0.00 0.0 31.74 4.17 R
3673 4345 0.319405 GCCTGCCAAGAAAAGCATGT 59.681 50.0 0.00 0.0 38.56 3.21 R
4660 5359 0.179189 GCGTAGGCAAGTGATTGTGC 60.179 55.0 1.75 0.0 39.62 4.57 R
6161 7201 0.099791 CGCCGTGTGAACAGGTTTTT 59.900 50.0 2.79 0.0 0.00 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.749118 GTGATTTGGAGTGAAGTTTATGCATC 59.251 38.462 0.19 0.00 0.00 3.91
65 66 1.712056 TCTTCCCCGTGTGAAGAGAA 58.288 50.000 4.87 0.00 42.38 2.87
92 93 4.223923 CCACTCATCTCTACCTGGAAACTT 59.776 45.833 0.00 0.00 0.00 2.66
94 95 5.186797 CACTCATCTCTACCTGGAAACTTCT 59.813 44.000 0.00 0.00 0.00 2.85
142 143 8.913487 ATGGAAGAAAATCTGCTTCAATTTTT 57.087 26.923 0.00 0.00 41.69 1.94
421 424 8.895845 CAAAAATTAACTGACGAGTTTGAGATG 58.104 33.333 0.00 0.00 39.56 2.90
470 764 3.469008 TTACTGTAGTTGCTGCTGTGT 57.531 42.857 0.00 0.00 31.91 3.72
492 786 8.243426 TGTGTACTTATTGAAAATCAATGCTCC 58.757 33.333 14.23 1.90 45.77 4.70
511 807 1.534729 CCCCCTGTAGTTTTCACAGC 58.465 55.000 0.00 0.00 41.72 4.40
512 808 1.202879 CCCCCTGTAGTTTTCACAGCA 60.203 52.381 0.00 0.00 41.72 4.41
562 862 2.584835 TTACAAGCCTGCACCTTCAT 57.415 45.000 0.00 0.00 0.00 2.57
578 878 9.348476 TGCACCTTCATATATATTTTTACTGCA 57.652 29.630 0.00 0.47 0.00 4.41
609 909 4.849518 AGAACTATTCCCTCTGCTTTTCC 58.150 43.478 0.00 0.00 0.00 3.13
615 936 2.863809 TCCCTCTGCTTTTCCTGTTTC 58.136 47.619 0.00 0.00 0.00 2.78
617 938 2.958355 CCCTCTGCTTTTCCTGTTTCAA 59.042 45.455 0.00 0.00 0.00 2.69
627 948 2.741612 TCCTGTTTCAAATTTGCTGCG 58.258 42.857 13.54 1.09 0.00 5.18
628 949 2.100584 TCCTGTTTCAAATTTGCTGCGT 59.899 40.909 13.54 0.00 0.00 5.24
632 954 1.327303 TTCAAATTTGCTGCGTCCCT 58.673 45.000 13.54 0.00 0.00 4.20
633 955 1.327303 TCAAATTTGCTGCGTCCCTT 58.673 45.000 13.54 0.00 0.00 3.95
635 957 1.000385 CAAATTTGCTGCGTCCCTTCA 60.000 47.619 5.01 0.00 0.00 3.02
649 971 4.517453 CGTCCCTTCACCAAAATAGTTTGA 59.483 41.667 16.81 0.00 45.99 2.69
650 972 5.183140 CGTCCCTTCACCAAAATAGTTTGAT 59.817 40.000 16.81 0.00 45.99 2.57
653 975 6.553100 TCCCTTCACCAAAATAGTTTGATGTT 59.447 34.615 16.81 0.00 45.99 2.71
677 999 7.912778 TTTTTAAGGGCAAGCCAGATTATAT 57.087 32.000 13.87 0.00 37.98 0.86
685 1007 5.125097 GGCAAGCCAGATTATATGAATCAGG 59.875 44.000 6.14 8.45 36.67 3.86
704 1026 3.567164 CAGGTTCTGTGACAGATTTGCTT 59.433 43.478 16.98 1.41 40.39 3.91
709 1031 5.227569 TCTGTGACAGATTTGCTTTCCTA 57.772 39.130 11.93 0.00 35.39 2.94
712 1034 7.394016 TCTGTGACAGATTTGCTTTCCTATTA 58.606 34.615 11.93 0.00 35.39 0.98
743 1072 3.640967 AGACACATTTGCTTTTGGCCTTA 59.359 39.130 3.32 0.00 40.92 2.69
759 1088 7.587037 TTGGCCTTAATTATTTCATCCTCAG 57.413 36.000 3.32 0.00 0.00 3.35
779 1109 9.449719 TCCTCAGTAATTTCTGAAAACTATTCC 57.550 33.333 14.72 0.00 42.73 3.01
843 1173 7.744276 GCAAAGTTCTTTCAACGAACAATTTTT 59.256 29.630 9.27 0.00 42.37 1.94
844 1174 9.039500 CAAAGTTCTTTCAACGAACAATTTTTG 57.961 29.630 9.27 7.05 42.37 2.44
845 1175 6.761117 AGTTCTTTCAACGAACAATTTTTGC 58.239 32.000 9.27 0.00 42.37 3.68
859 1226 2.295472 TTTTGCTGCTGCTGCGGTTT 62.295 50.000 23.39 0.00 46.77 3.27
861 1228 2.028043 GCTGCTGCTGCGGTTTTT 59.972 55.556 23.39 0.00 46.77 1.94
864 1231 0.038892 CTGCTGCTGCGGTTTTTCAT 60.039 50.000 15.76 0.00 43.34 2.57
867 1234 0.109132 CTGCTGCGGTTTTTCATCCC 60.109 55.000 0.00 0.00 0.00 3.85
868 1235 0.539438 TGCTGCGGTTTTTCATCCCT 60.539 50.000 0.00 0.00 0.00 4.20
869 1236 0.109132 GCTGCGGTTTTTCATCCCTG 60.109 55.000 0.00 0.00 0.00 4.45
871 1238 1.215382 GCGGTTTTTCATCCCTGCC 59.785 57.895 0.00 0.00 0.00 4.85
876 1243 2.232208 GGTTTTTCATCCCTGCCTTCAG 59.768 50.000 0.00 0.00 40.02 3.02
1016 1384 2.368655 CCAATGGCTTGGCAGTTAAC 57.631 50.000 0.00 0.00 45.28 2.01
1030 1398 3.411446 CAGTTAACTGCCCTTGTGATGA 58.589 45.455 22.03 0.00 37.15 2.92
1056 1424 4.434713 AACCTGTTTGATGTTATTCCGC 57.565 40.909 0.00 0.00 0.00 5.54
1143 1511 2.787994 CAGCTGGAAGTCTGGAACAAT 58.212 47.619 5.57 0.00 34.00 2.71
1320 1688 6.924111 AGCCTTTGTTATCGATTCATTTGTT 58.076 32.000 1.71 0.00 0.00 2.83
1336 1704 2.074547 TGTTACTACGCTGACAAGGC 57.925 50.000 0.00 0.00 0.00 4.35
1444 1812 3.940221 AGTGCTTGATCTGAGCTCAAATC 59.060 43.478 21.02 21.02 40.75 2.17
1458 1826 5.619220 AGCTCAAATCTTCTGTATGGATCC 58.381 41.667 4.20 4.20 0.00 3.36
1598 1966 1.670083 AGCGTAACCGGTTGAAGGC 60.670 57.895 30.08 25.22 43.33 4.35
1688 2056 1.302511 GCGAGGTTCCAGCTTTGGA 60.303 57.895 0.00 0.00 35.93 3.53
1762 2130 1.842562 AGCTTCCAGACATGCCTACAT 59.157 47.619 0.00 0.00 36.79 2.29
1770 2138 4.444733 CCAGACATGCCTACATCATTGGTA 60.445 45.833 0.00 0.00 32.87 3.25
1833 2201 5.102313 CCTGAAAAGTTTGGTCAACTGAAC 58.898 41.667 0.00 0.00 45.77 3.18
1839 2207 2.427095 GTTTGGTCAACTGAACAGGCTT 59.573 45.455 6.76 0.00 43.44 4.35
1877 2245 2.631160 TTCAACTTTCTCGAGGGCAA 57.369 45.000 13.56 2.60 0.00 4.52
1878 2246 2.631160 TCAACTTTCTCGAGGGCAAA 57.369 45.000 13.56 5.10 0.00 3.68
2022 2390 3.594603 ACTAACCGAATCACAGGTGAG 57.405 47.619 8.24 0.00 43.61 3.51
2112 2480 0.478072 ACCCTGAACACCAGCATGAA 59.522 50.000 0.00 0.00 41.57 2.57
2229 2597 9.171877 CTTGTTCTTTCTCTTCTATTAATGGCT 57.828 33.333 0.00 0.00 0.00 4.75
2268 2636 4.233789 GTCAGAGAGTTACAGCAGAACAG 58.766 47.826 0.00 0.00 0.00 3.16
2660 3028 6.041409 TGAATCCCATTGTTTGCTTTTCTACA 59.959 34.615 0.00 0.00 0.00 2.74
2661 3029 5.860941 TCCCATTGTTTGCTTTTCTACAA 57.139 34.783 0.00 0.00 35.25 2.41
2704 3074 5.105595 CCAGCCCATTTCTTTCTTCTTTAGG 60.106 44.000 0.00 0.00 0.00 2.69
2938 3598 2.874701 CAAATACCTCCCTGAATGAGCG 59.125 50.000 0.00 0.00 0.00 5.03
2941 3601 0.324738 ACCTCCCTGAATGAGCGAGA 60.325 55.000 0.00 0.00 0.00 4.04
2942 3602 0.388659 CCTCCCTGAATGAGCGAGAG 59.611 60.000 0.00 0.00 0.00 3.20
3148 3812 4.692155 CCATTGGAAAGGTTTGCTGATTTC 59.308 41.667 0.00 0.00 0.00 2.17
3301 3972 5.368989 AGTTCCTATAGCCATACTTTGTGC 58.631 41.667 0.00 0.00 0.00 4.57
3330 4001 5.778161 TGTTACAGCTTGATTGTCATACG 57.222 39.130 0.00 0.00 0.00 3.06
3332 4003 2.977914 ACAGCTTGATTGTCATACGCT 58.022 42.857 0.00 0.00 0.00 5.07
3731 4403 5.240891 ACACTGAAATGGTGTGATAGACTG 58.759 41.667 0.00 0.00 44.82 3.51
3847 4519 4.987408 TGCTTGATGAACACCATATTGG 57.013 40.909 0.00 0.00 45.02 3.16
3863 4535 5.760253 CCATATTGGAAAACTGAGCGACTAT 59.240 40.000 0.00 0.00 40.96 2.12
4000 4672 4.284234 AGTCCATGCTTGTTTTTAATGCCT 59.716 37.500 0.00 0.00 0.00 4.75
4001 4673 4.389687 GTCCATGCTTGTTTTTAATGCCTG 59.610 41.667 0.00 0.00 0.00 4.85
4002 4674 3.125658 CCATGCTTGTTTTTAATGCCTGC 59.874 43.478 0.00 0.00 0.00 4.85
4035 4707 3.560636 TTACAGGCAATAGGAGAAGGC 57.439 47.619 0.00 0.00 0.00 4.35
4077 4749 6.749923 AATGCTGAAGAATTGTAAGTCTCC 57.250 37.500 0.00 0.00 31.24 3.71
4088 4760 6.627395 ATTGTAAGTCTCCGAGTCATCTAG 57.373 41.667 0.00 0.00 0.00 2.43
4169 4854 3.346315 TGATGTTCAGCCATGTCGAAAT 58.654 40.909 0.00 0.00 0.00 2.17
4179 4864 3.726782 GCCATGTCGAAATTGTAACGTCC 60.727 47.826 0.00 0.00 0.00 4.79
4220 4905 4.644103 AACTTTGCAGGATGATGTATGC 57.356 40.909 0.00 0.00 39.69 3.14
4236 4921 4.808558 TGTATGCTCTTTTGGTTGCATTC 58.191 39.130 4.65 1.13 42.60 2.67
4259 4944 2.040278 ACTTGAAGCACTTATGGGCTCA 59.960 45.455 5.74 3.71 40.01 4.26
4325 5012 5.299531 GGTATATTTCCCCTCTTGCTTTGTC 59.700 44.000 0.00 0.00 0.00 3.18
4357 5044 4.840716 AGATGATGCTTAGATGGATCCC 57.159 45.455 9.90 0.00 34.50 3.85
4384 5078 5.050159 CCTCAGTTTTATTTGGCTTTGCAAC 60.050 40.000 0.00 0.00 0.00 4.17
4385 5079 4.813697 TCAGTTTTATTTGGCTTTGCAACC 59.186 37.500 0.00 0.00 0.00 3.77
4386 5080 4.574013 CAGTTTTATTTGGCTTTGCAACCA 59.426 37.500 0.00 0.60 0.00 3.67
4387 5081 4.574421 AGTTTTATTTGGCTTTGCAACCAC 59.426 37.500 8.23 0.00 35.10 4.16
4388 5082 2.829741 TATTTGGCTTTGCAACCACC 57.170 45.000 8.23 6.47 35.10 4.61
4389 5083 0.835941 ATTTGGCTTTGCAACCACCA 59.164 45.000 8.23 8.97 35.10 4.17
4390 5084 0.615331 TTTGGCTTTGCAACCACCAA 59.385 45.000 18.41 18.41 38.58 3.67
4401 5095 4.657013 TGCAACCACCAATACTCAATACA 58.343 39.130 0.00 0.00 0.00 2.29
4435 5130 7.650104 TCTTGGTTTTATTTCACAACGATTTCC 59.350 33.333 0.00 0.00 0.00 3.13
4437 5132 6.041069 TGGTTTTATTTCACAACGATTTCCCT 59.959 34.615 0.00 0.00 0.00 4.20
4438 5133 6.364976 GGTTTTATTTCACAACGATTTCCCTG 59.635 38.462 0.00 0.00 0.00 4.45
4439 5134 6.885952 TTTATTTCACAACGATTTCCCTGA 57.114 33.333 0.00 0.00 0.00 3.86
4440 5135 6.494893 TTATTTCACAACGATTTCCCTGAG 57.505 37.500 0.00 0.00 0.00 3.35
4441 5136 3.485463 TTCACAACGATTTCCCTGAGT 57.515 42.857 0.00 0.00 0.00 3.41
4442 5137 3.040147 TCACAACGATTTCCCTGAGTC 57.960 47.619 0.00 0.00 0.00 3.36
4444 5139 3.830178 TCACAACGATTTCCCTGAGTCTA 59.170 43.478 0.00 0.00 0.00 2.59
4445 5140 3.927142 CACAACGATTTCCCTGAGTCTAC 59.073 47.826 0.00 0.00 0.00 2.59
4446 5141 3.576982 ACAACGATTTCCCTGAGTCTACA 59.423 43.478 0.00 0.00 0.00 2.74
4447 5142 4.177026 CAACGATTTCCCTGAGTCTACAG 58.823 47.826 0.00 0.00 37.61 2.74
4448 5143 3.432378 ACGATTTCCCTGAGTCTACAGT 58.568 45.455 0.00 0.00 36.30 3.55
4484 5182 3.209410 CAAGCCATGACTCCAATCCTAC 58.791 50.000 0.00 0.00 0.00 3.18
4501 5199 3.016736 CCTACGTTTTTCCATCCATGCT 58.983 45.455 0.00 0.00 0.00 3.79
4522 5220 4.125703 CTCTTTTAGAATCTGCGCTCCAT 58.874 43.478 9.73 0.00 0.00 3.41
4526 5224 4.511617 TTAGAATCTGCGCTCCATAGAG 57.488 45.455 9.73 0.00 43.57 2.43
4528 5226 0.034616 AATCTGCGCTCCATAGAGGC 59.965 55.000 9.73 0.00 40.79 4.70
4529 5227 1.117749 ATCTGCGCTCCATAGAGGCA 61.118 55.000 9.73 4.76 41.25 4.75
4530 5228 1.117749 TCTGCGCTCCATAGAGGCAT 61.118 55.000 9.73 0.00 42.02 4.40
4554 5253 9.708222 CATGTACTACTGTTTTTATGCTTCATC 57.292 33.333 0.00 0.00 0.00 2.92
4576 5275 9.778741 TCATCTGATAACTAAAGAAAACAGTGT 57.221 29.630 0.00 0.00 0.00 3.55
4641 5340 6.794374 TGCTAACATGGTTATAGCACAAATG 58.206 36.000 16.06 0.00 45.10 2.32
4678 5377 1.442769 AGCACAATCACTTGCCTACG 58.557 50.000 0.00 0.00 39.75 3.51
4695 5394 0.962356 ACGCAGAAAGGGATTGCAGG 60.962 55.000 0.00 0.00 37.69 4.85
4705 5404 1.689258 GGGATTGCAGGGTTGGCTTAT 60.689 52.381 0.00 0.00 0.00 1.73
4713 5412 5.761205 TGCAGGGTTGGCTTATATTTCTTA 58.239 37.500 0.00 0.00 0.00 2.10
4734 5433 8.158025 TCTTAAGAGATATTGGGGAGTGAAAA 57.842 34.615 0.00 0.00 0.00 2.29
4735 5434 8.781951 TCTTAAGAGATATTGGGGAGTGAAAAT 58.218 33.333 0.00 0.00 0.00 1.82
4750 5453 9.713713 GGGAGTGAAAATATCTTTATCTCTACC 57.286 37.037 0.00 0.00 30.10 3.18
4751 5454 9.413048 GGAGTGAAAATATCTTTATCTCTACCG 57.587 37.037 0.00 0.00 0.00 4.02
4755 5458 9.760077 TGAAAATATCTTTATCTCTACCGAACC 57.240 33.333 0.00 0.00 0.00 3.62
4756 5459 9.984190 GAAAATATCTTTATCTCTACCGAACCT 57.016 33.333 0.00 0.00 0.00 3.50
4757 5460 9.984190 AAAATATCTTTATCTCTACCGAACCTC 57.016 33.333 0.00 0.00 0.00 3.85
4758 5461 8.943594 AATATCTTTATCTCTACCGAACCTCT 57.056 34.615 0.00 0.00 0.00 3.69
4759 5462 8.943594 ATATCTTTATCTCTACCGAACCTCTT 57.056 34.615 0.00 0.00 0.00 2.85
4761 5464 8.943594 ATCTTTATCTCTACCGAACCTCTTAT 57.056 34.615 0.00 0.00 0.00 1.73
4779 5482 7.121315 ACCTCTTATAAAATCTGAGTTGGTTGC 59.879 37.037 0.00 0.00 0.00 4.17
4780 5483 7.121168 CCTCTTATAAAATCTGAGTTGGTTGCA 59.879 37.037 0.00 0.00 0.00 4.08
4802 5505 5.126384 GCAGTCTGTCCACTAAGAGATTACT 59.874 44.000 0.93 0.00 0.00 2.24
4882 5592 7.939784 ATAATTGAAGTTCTAGGTTTGTCCC 57.060 36.000 4.17 0.00 36.75 4.46
4883 5593 4.781775 TTGAAGTTCTAGGTTTGTCCCA 57.218 40.909 4.17 0.00 36.75 4.37
4884 5594 4.781775 TGAAGTTCTAGGTTTGTCCCAA 57.218 40.909 4.17 0.00 36.75 4.12
4885 5595 4.714632 TGAAGTTCTAGGTTTGTCCCAAG 58.285 43.478 4.17 0.00 36.75 3.61
4886 5596 4.165372 TGAAGTTCTAGGTTTGTCCCAAGT 59.835 41.667 4.17 0.00 36.75 3.16
4887 5597 4.790718 AGTTCTAGGTTTGTCCCAAGTT 57.209 40.909 0.00 0.00 36.75 2.66
4888 5598 5.899631 AGTTCTAGGTTTGTCCCAAGTTA 57.100 39.130 0.00 0.00 36.75 2.24
4889 5599 6.256643 AGTTCTAGGTTTGTCCCAAGTTAA 57.743 37.500 0.00 0.00 36.75 2.01
4890 5600 6.665695 AGTTCTAGGTTTGTCCCAAGTTAAA 58.334 36.000 0.00 0.00 36.75 1.52
4891 5601 6.544931 AGTTCTAGGTTTGTCCCAAGTTAAAC 59.455 38.462 0.00 0.00 36.75 2.01
4892 5602 6.256643 TCTAGGTTTGTCCCAAGTTAAACT 57.743 37.500 0.00 0.00 36.75 2.66
4893 5603 6.665695 TCTAGGTTTGTCCCAAGTTAAACTT 58.334 36.000 0.00 0.00 39.39 2.66
4928 5638 9.844257 TTGACCAATTTTATGGAGAAATTTGTT 57.156 25.926 0.00 0.00 43.54 2.83
5000 5710 8.503458 AAGAATCTCATGAGACTAATTTGGTG 57.497 34.615 27.37 0.00 40.75 4.17
5001 5711 7.855375 AGAATCTCATGAGACTAATTTGGTGA 58.145 34.615 27.37 1.06 40.75 4.02
5002 5712 8.492782 AGAATCTCATGAGACTAATTTGGTGAT 58.507 33.333 27.37 4.18 40.75 3.06
5003 5713 8.674263 AATCTCATGAGACTAATTTGGTGATC 57.326 34.615 27.37 0.00 40.75 2.92
5004 5714 7.186570 TCTCATGAGACTAATTTGGTGATCA 57.813 36.000 21.67 0.00 31.41 2.92
5005 5715 7.623630 TCTCATGAGACTAATTTGGTGATCAA 58.376 34.615 21.67 0.00 31.41 2.57
5006 5716 7.550551 TCTCATGAGACTAATTTGGTGATCAAC 59.449 37.037 21.67 2.98 31.54 3.18
5007 5717 7.397221 TCATGAGACTAATTTGGTGATCAACT 58.603 34.615 12.94 0.00 34.67 3.16
5008 5718 7.550551 TCATGAGACTAATTTGGTGATCAACTC 59.449 37.037 12.94 0.00 34.67 3.01
5009 5719 6.173339 TGAGACTAATTTGGTGATCAACTCC 58.827 40.000 12.94 2.88 34.67 3.85
5010 5720 5.501156 AGACTAATTTGGTGATCAACTCCC 58.499 41.667 12.94 2.48 34.67 4.30
5011 5721 5.251700 AGACTAATTTGGTGATCAACTCCCT 59.748 40.000 12.94 0.00 34.67 4.20
5012 5722 5.501156 ACTAATTTGGTGATCAACTCCCTC 58.499 41.667 12.94 0.00 34.67 4.30
5013 5723 4.664688 AATTTGGTGATCAACTCCCTCT 57.335 40.909 12.94 0.00 34.67 3.69
5014 5724 3.423539 TTTGGTGATCAACTCCCTCTG 57.576 47.619 12.94 0.00 34.67 3.35
5015 5725 2.030027 TGGTGATCAACTCCCTCTGT 57.970 50.000 12.94 0.00 0.00 3.41
5016 5726 2.338809 TGGTGATCAACTCCCTCTGTT 58.661 47.619 12.94 0.00 0.00 3.16
5017 5727 2.303022 TGGTGATCAACTCCCTCTGTTC 59.697 50.000 12.94 0.00 0.00 3.18
5018 5728 2.303022 GGTGATCAACTCCCTCTGTTCA 59.697 50.000 2.64 0.00 0.00 3.18
5019 5729 3.330267 GTGATCAACTCCCTCTGTTCAC 58.670 50.000 0.00 0.00 35.97 3.18
5020 5730 2.972021 TGATCAACTCCCTCTGTTCACA 59.028 45.455 0.00 0.00 0.00 3.58
5021 5731 3.390967 TGATCAACTCCCTCTGTTCACAA 59.609 43.478 0.00 0.00 0.00 3.33
5022 5732 3.924114 TCAACTCCCTCTGTTCACAAA 57.076 42.857 0.00 0.00 0.00 2.83
5023 5733 4.437682 TCAACTCCCTCTGTTCACAAAT 57.562 40.909 0.00 0.00 0.00 2.32
5024 5734 5.560722 TCAACTCCCTCTGTTCACAAATA 57.439 39.130 0.00 0.00 0.00 1.40
5025 5735 6.126863 TCAACTCCCTCTGTTCACAAATAT 57.873 37.500 0.00 0.00 0.00 1.28
5026 5736 7.252612 TCAACTCCCTCTGTTCACAAATATA 57.747 36.000 0.00 0.00 0.00 0.86
5027 5737 7.685481 TCAACTCCCTCTGTTCACAAATATAA 58.315 34.615 0.00 0.00 0.00 0.98
5028 5738 7.824289 TCAACTCCCTCTGTTCACAAATATAAG 59.176 37.037 0.00 0.00 0.00 1.73
5029 5739 6.653989 ACTCCCTCTGTTCACAAATATAAGG 58.346 40.000 0.00 0.00 0.00 2.69
5030 5740 6.215636 ACTCCCTCTGTTCACAAATATAAGGT 59.784 38.462 0.00 0.00 0.00 3.50
5031 5741 6.414732 TCCCTCTGTTCACAAATATAAGGTG 58.585 40.000 0.00 0.00 0.00 4.00
5032 5742 6.012858 TCCCTCTGTTCACAAATATAAGGTGT 60.013 38.462 0.00 0.00 34.27 4.16
5033 5743 6.659242 CCCTCTGTTCACAAATATAAGGTGTT 59.341 38.462 0.00 0.00 34.27 3.32
5034 5744 7.827236 CCCTCTGTTCACAAATATAAGGTGTTA 59.173 37.037 0.00 0.00 34.27 2.41
5035 5745 8.665685 CCTCTGTTCACAAATATAAGGTGTTAC 58.334 37.037 0.00 0.00 34.27 2.50
5036 5746 8.556213 TCTGTTCACAAATATAAGGTGTTACC 57.444 34.615 0.00 0.00 38.99 2.85
5051 5761 6.877611 GGTGTTACCTTTTTCTGAATCAGA 57.122 37.500 9.18 9.18 35.42 3.27
5052 5762 7.454260 GGTGTTACCTTTTTCTGAATCAGAT 57.546 36.000 14.31 0.29 36.42 2.90
5053 5763 7.308435 GGTGTTACCTTTTTCTGAATCAGATG 58.692 38.462 14.31 5.17 36.42 2.90
5054 5764 7.040409 GGTGTTACCTTTTTCTGAATCAGATGT 60.040 37.037 14.31 8.93 36.42 3.06
5055 5765 8.999431 GTGTTACCTTTTTCTGAATCAGATGTA 58.001 33.333 14.31 8.06 40.39 2.29
5056 5766 9.739276 TGTTACCTTTTTCTGAATCAGATGTAT 57.261 29.630 14.31 1.23 40.39 2.29
5065 5775 9.463443 TTTCTGAATCAGATGTATATACACACG 57.537 33.333 17.69 8.93 40.39 4.49
5066 5776 7.084486 TCTGAATCAGATGTATATACACACGC 58.916 38.462 17.69 7.98 39.30 5.34
5067 5777 6.981722 TGAATCAGATGTATATACACACGCT 58.018 36.000 17.69 9.94 39.30 5.07
5068 5778 7.433680 TGAATCAGATGTATATACACACGCTT 58.566 34.615 17.69 9.12 39.30 4.68
5069 5779 7.926018 TGAATCAGATGTATATACACACGCTTT 59.074 33.333 17.69 7.85 39.30 3.51
5070 5780 9.406828 GAATCAGATGTATATACACACGCTTTA 57.593 33.333 17.69 4.97 39.30 1.85
5071 5781 8.972262 ATCAGATGTATATACACACGCTTTAG 57.028 34.615 17.69 3.10 39.30 1.85
5072 5782 7.937649 TCAGATGTATATACACACGCTTTAGT 58.062 34.615 17.69 0.00 39.30 2.24
5073 5783 7.860872 TCAGATGTATATACACACGCTTTAGTG 59.139 37.037 17.69 7.80 46.83 2.74
5084 5794 4.011058 ACGCTTTAGTGTGTTTGTTCAC 57.989 40.909 0.00 0.00 37.39 3.18
5085 5795 3.687698 ACGCTTTAGTGTGTTTGTTCACT 59.312 39.130 0.00 0.00 45.21 3.41
5086 5796 4.201783 ACGCTTTAGTGTGTTTGTTCACTC 60.202 41.667 1.08 0.00 42.77 3.51
5087 5797 4.201773 CGCTTTAGTGTGTTTGTTCACTCA 60.202 41.667 1.08 0.00 42.77 3.41
5088 5798 5.504010 CGCTTTAGTGTGTTTGTTCACTCAT 60.504 40.000 1.08 0.00 42.77 2.90
5089 5799 6.265577 GCTTTAGTGTGTTTGTTCACTCATT 58.734 36.000 1.08 0.00 42.77 2.57
5090 5800 6.751888 GCTTTAGTGTGTTTGTTCACTCATTT 59.248 34.615 1.08 0.00 42.77 2.32
5091 5801 7.275560 GCTTTAGTGTGTTTGTTCACTCATTTT 59.724 33.333 1.08 0.00 42.77 1.82
5092 5802 9.781834 CTTTAGTGTGTTTGTTCACTCATTTTA 57.218 29.630 1.08 0.00 42.77 1.52
5093 5803 9.781834 TTTAGTGTGTTTGTTCACTCATTTTAG 57.218 29.630 1.08 0.00 42.77 1.85
5094 5804 7.391148 AGTGTGTTTGTTCACTCATTTTAGT 57.609 32.000 0.00 0.00 40.28 2.24
5095 5805 7.472543 AGTGTGTTTGTTCACTCATTTTAGTC 58.527 34.615 0.00 0.00 40.28 2.59
5096 5806 6.691388 GTGTGTTTGTTCACTCATTTTAGTCC 59.309 38.462 0.00 0.00 38.90 3.85
5097 5807 5.907391 GTGTTTGTTCACTCATTTTAGTCCG 59.093 40.000 0.00 0.00 35.68 4.79
5098 5808 5.587043 TGTTTGTTCACTCATTTTAGTCCGT 59.413 36.000 0.00 0.00 0.00 4.69
5099 5809 6.762187 TGTTTGTTCACTCATTTTAGTCCGTA 59.238 34.615 0.00 0.00 0.00 4.02
5100 5810 7.442969 TGTTTGTTCACTCATTTTAGTCCGTAT 59.557 33.333 0.00 0.00 0.00 3.06
5101 5811 6.961359 TGTTCACTCATTTTAGTCCGTATG 57.039 37.500 0.00 0.00 0.00 2.39
5102 5812 6.460781 TGTTCACTCATTTTAGTCCGTATGT 58.539 36.000 0.00 0.00 0.00 2.29
5103 5813 7.604549 TGTTCACTCATTTTAGTCCGTATGTA 58.395 34.615 0.00 0.00 0.00 2.29
5104 5814 7.758076 TGTTCACTCATTTTAGTCCGTATGTAG 59.242 37.037 0.00 0.00 0.00 2.74
5105 5815 7.400599 TCACTCATTTTAGTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
5106 5816 7.478322 TCACTCATTTTAGTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
5107 5817 6.696148 CACTCATTTTAGTCCGTATGTAGTCC 59.304 42.308 0.00 0.00 0.00 3.85
5108 5818 6.379133 ACTCATTTTAGTCCGTATGTAGTCCA 59.621 38.462 0.00 0.00 0.00 4.02
5109 5819 7.069578 ACTCATTTTAGTCCGTATGTAGTCCAT 59.930 37.037 0.00 0.00 37.58 3.41
5110 5820 8.467963 TCATTTTAGTCCGTATGTAGTCCATA 57.532 34.615 0.00 0.00 34.86 2.74
5145 5855 9.619316 TTCAAAACATCTTATATTTGTGAACGG 57.381 29.630 0.00 0.00 35.01 4.44
5146 5856 9.004717 TCAAAACATCTTATATTTGTGAACGGA 57.995 29.630 0.00 0.00 35.01 4.69
5147 5857 9.787532 CAAAACATCTTATATTTGTGAACGGAT 57.212 29.630 0.00 0.00 0.00 4.18
5148 5858 9.787532 AAAACATCTTATATTTGTGAACGGATG 57.212 29.630 0.00 0.00 35.57 3.51
5149 5859 7.496529 ACATCTTATATTTGTGAACGGATGG 57.503 36.000 0.00 0.00 34.29 3.51
5150 5860 7.279615 ACATCTTATATTTGTGAACGGATGGA 58.720 34.615 0.00 0.00 34.29 3.41
5151 5861 7.442364 ACATCTTATATTTGTGAACGGATGGAG 59.558 37.037 0.00 0.00 34.29 3.86
5152 5862 6.884832 TCTTATATTTGTGAACGGATGGAGT 58.115 36.000 0.00 0.00 0.00 3.85
5153 5863 8.014070 TCTTATATTTGTGAACGGATGGAGTA 57.986 34.615 0.00 0.00 0.00 2.59
5154 5864 8.647796 TCTTATATTTGTGAACGGATGGAGTAT 58.352 33.333 0.00 0.00 0.00 2.12
5155 5865 9.923143 CTTATATTTGTGAACGGATGGAGTATA 57.077 33.333 0.00 0.00 0.00 1.47
5156 5866 9.923143 TTATATTTGTGAACGGATGGAGTATAG 57.077 33.333 0.00 0.00 0.00 1.31
5157 5867 5.925506 TTTGTGAACGGATGGAGTATAGA 57.074 39.130 0.00 0.00 0.00 1.98
5158 5868 6.479972 TTTGTGAACGGATGGAGTATAGAT 57.520 37.500 0.00 0.00 0.00 1.98
5159 5869 5.453567 TGTGAACGGATGGAGTATAGATG 57.546 43.478 0.00 0.00 0.00 2.90
5160 5870 4.893524 TGTGAACGGATGGAGTATAGATGT 59.106 41.667 0.00 0.00 0.00 3.06
5161 5871 5.362717 TGTGAACGGATGGAGTATAGATGTT 59.637 40.000 0.00 0.00 0.00 2.71
5162 5872 6.548251 TGTGAACGGATGGAGTATAGATGTTA 59.452 38.462 0.00 0.00 0.00 2.41
5163 5873 7.068962 TGTGAACGGATGGAGTATAGATGTTAA 59.931 37.037 0.00 0.00 0.00 2.01
5164 5874 8.088981 GTGAACGGATGGAGTATAGATGTTAAT 58.911 37.037 0.00 0.00 0.00 1.40
5165 5875 9.304335 TGAACGGATGGAGTATAGATGTTAATA 57.696 33.333 0.00 0.00 0.00 0.98
5195 5905 9.760077 TTTTCTGTAGACTTAGTTTGACTTAGG 57.240 33.333 0.00 0.00 29.73 2.69
5196 5906 8.701908 TTCTGTAGACTTAGTTTGACTTAGGA 57.298 34.615 0.00 0.00 29.73 2.94
5197 5907 8.108551 TCTGTAGACTTAGTTTGACTTAGGAC 57.891 38.462 0.00 0.00 29.73 3.85
5198 5908 7.722728 TCTGTAGACTTAGTTTGACTTAGGACA 59.277 37.037 0.00 0.99 29.73 4.02
5199 5909 8.241497 TGTAGACTTAGTTTGACTTAGGACAA 57.759 34.615 0.00 0.00 29.73 3.18
5200 5910 8.698210 TGTAGACTTAGTTTGACTTAGGACAAA 58.302 33.333 0.00 0.00 35.50 2.83
5213 5923 9.743057 TGACTTAGGACAAACACAATTATTTTG 57.257 29.630 4.75 4.75 36.49 2.44
5214 5924 9.959749 GACTTAGGACAAACACAATTATTTTGA 57.040 29.630 10.85 0.00 34.84 2.69
5218 5928 8.125728 AGGACAAACACAATTATTTTGAAACG 57.874 30.769 10.85 0.00 34.84 3.60
5219 5929 7.223777 AGGACAAACACAATTATTTTGAAACGG 59.776 33.333 10.85 0.00 34.84 4.44
5220 5930 6.710611 ACAAACACAATTATTTTGAAACGGC 58.289 32.000 10.85 0.00 34.84 5.68
5221 5931 6.313905 ACAAACACAATTATTTTGAAACGGCA 59.686 30.769 10.85 0.00 34.84 5.69
5222 5932 6.523676 AACACAATTATTTTGAAACGGCAG 57.476 33.333 0.00 0.00 0.00 4.85
5223 5933 4.987912 ACACAATTATTTTGAAACGGCAGG 59.012 37.500 0.00 0.00 0.00 4.85
5224 5934 5.221342 ACACAATTATTTTGAAACGGCAGGA 60.221 36.000 0.00 0.00 0.00 3.86
5225 5935 5.345741 CACAATTATTTTGAAACGGCAGGAG 59.654 40.000 0.00 0.00 0.00 3.69
5226 5936 5.010617 ACAATTATTTTGAAACGGCAGGAGT 59.989 36.000 0.00 0.00 0.00 3.85
5296 6170 1.350351 ACCTTCTCAGTGATGCTGCTT 59.650 47.619 0.00 0.00 44.66 3.91
5297 6171 2.224719 ACCTTCTCAGTGATGCTGCTTT 60.225 45.455 0.00 0.00 44.66 3.51
5301 6175 1.738350 CTCAGTGATGCTGCTTTCAGG 59.262 52.381 0.00 0.65 44.66 3.86
5305 6179 1.888512 GTGATGCTGCTTTCAGGGAAA 59.111 47.619 0.00 0.00 40.65 3.13
5306 6180 2.297033 GTGATGCTGCTTTCAGGGAAAA 59.703 45.455 0.00 0.00 40.65 2.29
5308 6182 4.158394 GTGATGCTGCTTTCAGGGAAAATA 59.842 41.667 0.00 0.00 40.65 1.40
5309 6183 4.158394 TGATGCTGCTTTCAGGGAAAATAC 59.842 41.667 0.00 0.00 40.65 1.89
5310 6184 3.766545 TGCTGCTTTCAGGGAAAATACT 58.233 40.909 0.00 0.00 40.65 2.12
5311 6185 3.758554 TGCTGCTTTCAGGGAAAATACTC 59.241 43.478 0.00 0.00 40.65 2.59
5312 6186 3.758554 GCTGCTTTCAGGGAAAATACTCA 59.241 43.478 0.00 0.00 40.65 3.41
5313 6187 4.142513 GCTGCTTTCAGGGAAAATACTCAG 60.143 45.833 0.00 0.00 40.65 3.35
5314 6188 4.985538 TGCTTTCAGGGAAAATACTCAGT 58.014 39.130 0.00 0.00 30.84 3.41
5315 6189 6.121776 TGCTTTCAGGGAAAATACTCAGTA 57.878 37.500 0.00 0.00 30.84 2.74
5316 6190 6.539173 TGCTTTCAGGGAAAATACTCAGTAA 58.461 36.000 0.00 0.00 30.84 2.24
5317 6191 7.175104 TGCTTTCAGGGAAAATACTCAGTAAT 58.825 34.615 0.00 0.00 30.84 1.89
5318 6192 8.325787 TGCTTTCAGGGAAAATACTCAGTAATA 58.674 33.333 0.00 0.00 30.84 0.98
5319 6193 9.174166 GCTTTCAGGGAAAATACTCAGTAATAA 57.826 33.333 0.00 0.00 30.84 1.40
5337 6211 9.803315 CAGTAATAATACAGAAGTCAGTTAGCA 57.197 33.333 0.00 0.00 34.29 3.49
5340 6214 7.721286 ATAATACAGAAGTCAGTTAGCATGC 57.279 36.000 10.51 10.51 0.00 4.06
5341 6215 3.407424 ACAGAAGTCAGTTAGCATGCA 57.593 42.857 21.98 2.77 0.00 3.96
5342 6216 3.947868 ACAGAAGTCAGTTAGCATGCAT 58.052 40.909 21.98 7.68 0.00 3.96
5343 6217 4.330250 ACAGAAGTCAGTTAGCATGCATT 58.670 39.130 21.98 1.90 0.00 3.56
5344 6218 4.763793 ACAGAAGTCAGTTAGCATGCATTT 59.236 37.500 21.98 1.04 0.00 2.32
5345 6219 5.939883 ACAGAAGTCAGTTAGCATGCATTTA 59.060 36.000 21.98 0.00 0.00 1.40
5346 6220 6.128172 ACAGAAGTCAGTTAGCATGCATTTAC 60.128 38.462 21.98 11.52 0.00 2.01
5347 6221 6.093219 CAGAAGTCAGTTAGCATGCATTTACT 59.907 38.462 21.98 13.60 0.00 2.24
5348 6222 7.278646 CAGAAGTCAGTTAGCATGCATTTACTA 59.721 37.037 21.98 0.00 0.00 1.82
5349 6223 7.824289 AGAAGTCAGTTAGCATGCATTTACTAA 59.176 33.333 21.98 5.56 0.00 2.24
5350 6224 7.921786 AGTCAGTTAGCATGCATTTACTAAA 57.078 32.000 21.98 6.16 0.00 1.85
5351 6225 8.335532 AGTCAGTTAGCATGCATTTACTAAAA 57.664 30.769 21.98 3.97 0.00 1.52
5352 6226 8.454106 AGTCAGTTAGCATGCATTTACTAAAAG 58.546 33.333 21.98 4.88 0.00 2.27
5353 6227 8.237267 GTCAGTTAGCATGCATTTACTAAAAGT 58.763 33.333 21.98 0.00 0.00 2.66
5354 6228 8.236586 TCAGTTAGCATGCATTTACTAAAAGTG 58.763 33.333 21.98 11.46 0.00 3.16
5355 6229 8.236586 CAGTTAGCATGCATTTACTAAAAGTGA 58.763 33.333 21.98 0.00 0.00 3.41
5356 6230 8.792633 AGTTAGCATGCATTTACTAAAAGTGAA 58.207 29.630 21.98 0.00 0.00 3.18
5357 6231 9.065871 GTTAGCATGCATTTACTAAAAGTGAAG 57.934 33.333 21.98 0.00 26.94 3.02
5358 6232 7.219484 AGCATGCATTTACTAAAAGTGAAGT 57.781 32.000 21.98 0.00 26.94 3.01
5359 6233 7.086376 AGCATGCATTTACTAAAAGTGAAGTG 58.914 34.615 21.98 0.00 26.94 3.16
5360 6234 6.183360 GCATGCATTTACTAAAAGTGAAGTGC 60.183 38.462 14.21 9.72 33.42 4.40
5361 6235 6.633500 TGCATTTACTAAAAGTGAAGTGCT 57.367 33.333 14.05 0.00 33.67 4.40
5362 6236 7.038154 TGCATTTACTAAAAGTGAAGTGCTT 57.962 32.000 14.05 0.00 33.67 3.91
5363 6237 8.160521 TGCATTTACTAAAAGTGAAGTGCTTA 57.839 30.769 14.05 1.49 33.67 3.09
5364 6238 8.625651 TGCATTTACTAAAAGTGAAGTGCTTAA 58.374 29.630 14.05 0.00 33.67 1.85
5365 6239 9.626045 GCATTTACTAAAAGTGAAGTGCTTAAT 57.374 29.630 0.00 0.00 31.88 1.40
5367 6241 9.626045 ATTTACTAAAAGTGAAGTGCTTAATGC 57.374 29.630 0.00 0.00 32.95 3.56
5382 6256 4.325472 GCTTAATGCATGAACTTTGTCAGC 59.675 41.667 0.00 0.00 42.31 4.26
5383 6257 5.706916 CTTAATGCATGAACTTTGTCAGCT 58.293 37.500 0.00 0.00 0.00 4.24
5384 6258 6.623549 GCTTAATGCATGAACTTTGTCAGCTA 60.624 38.462 0.00 0.00 42.31 3.32
5385 6259 4.691860 ATGCATGAACTTTGTCAGCTAC 57.308 40.909 0.00 0.00 0.00 3.58
5386 6260 3.743521 TGCATGAACTTTGTCAGCTACT 58.256 40.909 0.00 0.00 0.00 2.57
5387 6261 3.748048 TGCATGAACTTTGTCAGCTACTC 59.252 43.478 0.00 0.00 0.00 2.59
5388 6262 3.126000 GCATGAACTTTGTCAGCTACTCC 59.874 47.826 0.00 0.00 0.00 3.85
5389 6263 3.402628 TGAACTTTGTCAGCTACTCCC 57.597 47.619 0.00 0.00 0.00 4.30
5390 6264 2.972713 TGAACTTTGTCAGCTACTCCCT 59.027 45.455 0.00 0.00 0.00 4.20
5391 6265 4.157246 TGAACTTTGTCAGCTACTCCCTA 58.843 43.478 0.00 0.00 0.00 3.53
5392 6266 4.591498 TGAACTTTGTCAGCTACTCCCTAA 59.409 41.667 0.00 0.00 0.00 2.69
5393 6267 4.538746 ACTTTGTCAGCTACTCCCTAAC 57.461 45.455 0.00 0.00 0.00 2.34
5394 6268 3.901844 ACTTTGTCAGCTACTCCCTAACA 59.098 43.478 0.00 0.00 0.00 2.41
5395 6269 4.532521 ACTTTGTCAGCTACTCCCTAACAT 59.467 41.667 0.00 0.00 0.00 2.71
5396 6270 4.737855 TTGTCAGCTACTCCCTAACATC 57.262 45.455 0.00 0.00 0.00 3.06
5397 6271 3.982516 TGTCAGCTACTCCCTAACATCT 58.017 45.455 0.00 0.00 0.00 2.90
5398 6272 4.353777 TGTCAGCTACTCCCTAACATCTT 58.646 43.478 0.00 0.00 0.00 2.40
5399 6273 5.516044 TGTCAGCTACTCCCTAACATCTTA 58.484 41.667 0.00 0.00 0.00 2.10
5400 6274 6.136857 TGTCAGCTACTCCCTAACATCTTAT 58.863 40.000 0.00 0.00 0.00 1.73
5401 6275 7.295340 TGTCAGCTACTCCCTAACATCTTATA 58.705 38.462 0.00 0.00 0.00 0.98
5402 6276 7.950684 TGTCAGCTACTCCCTAACATCTTATAT 59.049 37.037 0.00 0.00 0.00 0.86
5403 6277 9.463902 GTCAGCTACTCCCTAACATCTTATATA 57.536 37.037 0.00 0.00 0.00 0.86
5413 6287 9.982651 CCCTAACATCTTATATATTATGGGACG 57.017 37.037 0.00 0.00 0.00 4.79
5414 6288 9.982651 CCTAACATCTTATATATTATGGGACGG 57.017 37.037 0.00 2.49 0.00 4.79
5417 6291 8.251383 ACATCTTATATATTATGGGACGGAGG 57.749 38.462 0.00 0.00 0.00 4.30
5418 6292 7.290248 ACATCTTATATATTATGGGACGGAGGG 59.710 40.741 0.00 0.00 0.00 4.30
5419 6293 6.988725 TCTTATATATTATGGGACGGAGGGA 58.011 40.000 0.00 0.00 0.00 4.20
5420 6294 7.067421 TCTTATATATTATGGGACGGAGGGAG 58.933 42.308 0.00 0.00 0.00 4.30
5421 6295 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
5422 6296 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
5435 6309 5.602978 ACGGAGGGAGTAATACAGAATTCAT 59.397 40.000 8.44 0.00 0.00 2.57
5441 6315 8.314751 AGGGAGTAATACAGAATTCATTATCCG 58.685 37.037 8.44 0.00 0.00 4.18
5453 6327 8.840321 AGAATTCATTATCCGGACTAATTTGTG 58.160 33.333 6.12 2.90 0.00 3.33
5454 6328 6.935741 TTCATTATCCGGACTAATTTGTGG 57.064 37.500 6.12 1.19 0.00 4.17
5461 6335 4.006989 CCGGACTAATTTGTGGTGATCAA 58.993 43.478 0.00 0.00 0.00 2.57
5462 6336 4.094887 CCGGACTAATTTGTGGTGATCAAG 59.905 45.833 0.00 0.00 0.00 3.02
5463 6337 4.695455 CGGACTAATTTGTGGTGATCAAGT 59.305 41.667 0.00 0.00 0.00 3.16
5464 6338 5.390885 CGGACTAATTTGTGGTGATCAAGTG 60.391 44.000 0.00 0.00 0.00 3.16
5467 6341 7.346751 ACTAATTTGTGGTGATCAAGTGTTT 57.653 32.000 0.00 0.00 0.00 2.83
5468 6342 7.781056 ACTAATTTGTGGTGATCAAGTGTTTT 58.219 30.769 0.00 0.00 0.00 2.43
5470 6344 4.383850 TTGTGGTGATCAAGTGTTTTGG 57.616 40.909 0.00 0.00 0.00 3.28
5471 6345 2.100584 TGTGGTGATCAAGTGTTTTGGC 59.899 45.455 0.00 0.00 0.00 4.52
5473 6356 1.335872 GGTGATCAAGTGTTTTGGCCG 60.336 52.381 0.00 0.00 0.00 6.13
5477 6360 1.021202 TCAAGTGTTTTGGCCGTCTG 58.979 50.000 0.00 0.00 0.00 3.51
5490 6373 2.091112 CGTCTGTCTGAAGCCAGCG 61.091 63.158 0.00 0.00 40.20 5.18
5493 6376 1.005748 CTGTCTGAAGCCAGCGTGA 60.006 57.895 0.00 0.00 40.20 4.35
5495 6378 0.179059 TGTCTGAAGCCAGCGTGAAA 60.179 50.000 0.00 0.00 40.20 2.69
5499 6382 1.267806 CTGAAGCCAGCGTGAAAATGT 59.732 47.619 0.00 0.00 33.07 2.71
5504 6387 2.100584 AGCCAGCGTGAAAATGTTTTGA 59.899 40.909 0.00 0.00 0.00 2.69
5512 6395 5.689961 GCGTGAAAATGTTTTGATTGTACCT 59.310 36.000 0.00 0.00 0.00 3.08
5514 6397 7.380065 GCGTGAAAATGTTTTGATTGTACCTAA 59.620 33.333 0.00 0.00 0.00 2.69
5515 6398 8.687301 CGTGAAAATGTTTTGATTGTACCTAAC 58.313 33.333 0.00 0.00 0.00 2.34
5516 6399 9.522804 GTGAAAATGTTTTGATTGTACCTAACA 57.477 29.630 0.00 0.00 35.88 2.41
5517 6400 9.522804 TGAAAATGTTTTGATTGTACCTAACAC 57.477 29.630 0.00 0.00 38.00 3.32
5522 6405 8.967664 TGTTTTGATTGTACCTAACACTTACT 57.032 30.769 0.00 0.00 38.00 2.24
5525 6408 6.104146 TGATTGTACCTAACACTTACTGCA 57.896 37.500 0.00 0.00 38.00 4.41
5526 6409 6.163476 TGATTGTACCTAACACTTACTGCAG 58.837 40.000 13.48 13.48 38.00 4.41
5527 6410 5.794726 TTGTACCTAACACTTACTGCAGA 57.205 39.130 23.35 0.48 38.00 4.26
5569 6452 8.729805 TTCACTGTTTGAAAAATATTTGCCTT 57.270 26.923 0.39 0.00 41.51 4.35
5570 6453 8.729805 TCACTGTTTGAAAAATATTTGCCTTT 57.270 26.923 0.39 0.00 0.00 3.11
5571 6454 9.823647 TCACTGTTTGAAAAATATTTGCCTTTA 57.176 25.926 0.39 0.00 0.00 1.85
5661 6544 1.341089 ACCTCATCGCAGGACTCACTA 60.341 52.381 2.23 0.00 36.96 2.74
5664 6547 1.604278 TCATCGCAGGACTCACTATCG 59.396 52.381 0.00 0.00 0.00 2.92
5754 6637 1.004918 GTGGAACCTGCAGTACGCT 60.005 57.895 13.81 0.00 43.06 5.07
5823 6706 0.310543 CGCAAGCCTGTTAGCACAAA 59.689 50.000 0.00 0.00 34.23 2.83
5987 6908 4.671516 GCTTGTTTTTGCATCGTACGTTAA 59.328 37.500 16.05 3.87 0.00 2.01
6009 6930 1.681264 AGTGTTTTGGCACCACTTAGC 59.319 47.619 7.60 0.00 40.04 3.09
6013 6934 3.055819 TGTTTTGGCACCACTTAGCAAAA 60.056 39.130 0.00 0.00 32.13 2.44
6030 6951 5.177326 AGCAAAACAAATCTGCTTGTTCAA 58.823 33.333 2.65 0.00 46.32 2.69
6058 7097 2.169832 ATCACCACTTCACCTCGTTG 57.830 50.000 0.00 0.00 0.00 4.10
6120 7159 9.781834 GTAATATCAGCTACTGACATCATACTC 57.218 37.037 0.00 0.00 43.63 2.59
6127 7166 3.854666 ACTGACATCATACTCAGTGCAC 58.145 45.455 9.40 9.40 44.43 4.57
6139 7179 2.608090 CTCAGTGCACTGCTACATGATG 59.392 50.000 36.76 14.69 43.46 3.07
6279 7319 1.078759 CAGTGTCGCGGAAAGCCTAG 61.079 60.000 6.13 0.00 44.76 3.02
6353 7396 7.714377 CAGCTTATTCTTCCTCATATTCACAGT 59.286 37.037 0.00 0.00 0.00 3.55
6383 7426 5.500234 CCAGTGGAAAGTTGATCATCCTTA 58.500 41.667 1.68 0.00 33.02 2.69
6422 7465 2.545526 ACTTGATAAGCCGCATTGATCG 59.454 45.455 0.00 0.00 0.00 3.69
6450 7493 9.208022 TCAAATGTCAGTATCTACAGAAAACAG 57.792 33.333 0.00 0.00 0.00 3.16
6555 7602 4.822896 TCAGTTTACTTGGTAACGGCAAAT 59.177 37.500 0.00 0.00 42.51 2.32
6672 7719 1.449353 GCTATCTGTGCTCCCCCAG 59.551 63.158 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.336433 CACTCCAAATCACACACAGAAACT 59.664 41.667 0.00 0.00 0.00 2.66
40 41 1.192146 TCACACGGGGAAGAGGAAGG 61.192 60.000 0.00 0.00 0.00 3.46
65 66 2.427002 CCAGGTAGAGATGAGTGGGGAT 60.427 54.545 0.00 0.00 0.00 3.85
111 112 6.930722 TGAAGCAGATTTTCTTCCATTTTTCC 59.069 34.615 0.00 0.00 38.26 3.13
117 118 8.913487 AAAAATTGAAGCAGATTTTCTTCCAT 57.087 26.923 0.00 0.00 38.26 3.41
162 163 9.508642 TCCATTATCTATACACACAAACAAACA 57.491 29.630 0.00 0.00 0.00 2.83
214 217 8.254508 TGGGGAAAGGAAAATGTAATAATTTCG 58.745 33.333 0.00 0.00 34.63 3.46
364 367 0.761187 AGACTCCTCTTGTGCAAGCA 59.239 50.000 7.03 0.00 38.28 3.91
365 368 1.889545 AAGACTCCTCTTGTGCAAGC 58.110 50.000 7.03 0.00 35.24 4.01
366 369 4.380531 TGTTAAGACTCCTCTTGTGCAAG 58.619 43.478 5.63 5.63 37.32 4.01
368 371 4.623932 ATGTTAAGACTCCTCTTGTGCA 57.376 40.909 0.00 0.00 37.32 4.57
369 372 4.393371 GGAATGTTAAGACTCCTCTTGTGC 59.607 45.833 0.00 0.00 37.32 4.57
370 373 5.799213 AGGAATGTTAAGACTCCTCTTGTG 58.201 41.667 0.00 0.00 37.32 3.33
371 374 6.043243 TGAAGGAATGTTAAGACTCCTCTTGT 59.957 38.462 2.76 0.00 37.31 3.16
470 764 6.323739 GGGGGAGCATTGATTTTCAATAAGTA 59.676 38.462 2.62 0.00 44.60 2.24
492 786 1.202879 TGCTGTGAAAACTACAGGGGG 60.203 52.381 7.19 0.00 44.36 5.40
497 791 3.462982 ACGACATGCTGTGAAAACTACA 58.537 40.909 0.00 0.00 0.00 2.74
498 792 4.468095 AACGACATGCTGTGAAAACTAC 57.532 40.909 0.00 0.00 0.00 2.73
500 794 4.096382 AGAAAACGACATGCTGTGAAAACT 59.904 37.500 0.00 0.00 0.00 2.66
501 795 4.351192 AGAAAACGACATGCTGTGAAAAC 58.649 39.130 0.00 0.00 0.00 2.43
502 796 4.630894 AGAAAACGACATGCTGTGAAAA 57.369 36.364 0.00 0.00 0.00 2.29
503 797 4.630894 AAGAAAACGACATGCTGTGAAA 57.369 36.364 0.00 0.00 0.00 2.69
511 807 2.289547 ACCCGACAAAGAAAACGACATG 59.710 45.455 0.00 0.00 0.00 3.21
512 808 2.546789 GACCCGACAAAGAAAACGACAT 59.453 45.455 0.00 0.00 0.00 3.06
517 813 3.119424 TGTTTGGACCCGACAAAGAAAAC 60.119 43.478 0.00 0.00 38.38 2.43
578 878 6.234177 CAGAGGGAATAGTTCTCACTTGTTT 58.766 40.000 0.00 0.00 34.06 2.83
586 886 4.878971 GGAAAAGCAGAGGGAATAGTTCTC 59.121 45.833 0.00 0.00 0.00 2.87
588 888 4.637977 CAGGAAAAGCAGAGGGAATAGTTC 59.362 45.833 0.00 0.00 0.00 3.01
609 909 2.472488 GGACGCAGCAAATTTGAAACAG 59.528 45.455 22.31 10.27 0.00 3.16
615 936 1.000385 TGAAGGGACGCAGCAAATTTG 60.000 47.619 14.03 14.03 0.00 2.32
617 938 0.598065 GTGAAGGGACGCAGCAAATT 59.402 50.000 0.00 0.00 0.00 1.82
627 948 6.590234 ATCAAACTATTTTGGTGAAGGGAC 57.410 37.500 5.79 0.00 42.23 4.46
653 975 7.563188 TCATATAATCTGGCTTGCCCTTAAAAA 59.437 33.333 9.35 0.00 0.00 1.94
658 980 4.729552 TCATATAATCTGGCTTGCCCTT 57.270 40.909 9.35 3.23 0.00 3.95
660 982 5.012239 TGATTCATATAATCTGGCTTGCCC 58.988 41.667 9.35 0.00 0.00 5.36
663 985 7.664731 AGAACCTGATTCATATAATCTGGCTTG 59.335 37.037 18.22 2.17 44.64 4.01
664 986 7.664731 CAGAACCTGATTCATATAATCTGGCTT 59.335 37.037 18.22 13.28 44.64 4.35
668 990 8.986847 GTCACAGAACCTGATTCATATAATCTG 58.013 37.037 0.45 0.00 40.09 2.90
670 992 8.893219 TGTCACAGAACCTGATTCATATAATC 57.107 34.615 0.45 0.00 40.09 1.75
676 998 4.897509 TCTGTCACAGAACCTGATTCAT 57.102 40.909 4.55 0.00 37.57 2.57
677 999 4.897509 ATCTGTCACAGAACCTGATTCA 57.102 40.909 12.63 0.00 44.04 2.57
685 1007 4.276926 AGGAAAGCAAATCTGTCACAGAAC 59.723 41.667 12.63 1.97 44.04 3.01
712 1034 7.388500 CCAAAAGCAAATGTGTCTTATCCAAAT 59.612 33.333 0.00 0.00 0.00 2.32
759 1088 9.556030 CGGAAAGGAATAGTTTTCAGAAATTAC 57.444 33.333 0.00 0.00 35.51 1.89
765 1095 3.682858 CGCGGAAAGGAATAGTTTTCAGA 59.317 43.478 0.00 0.00 35.51 3.27
773 1103 0.179084 TCCTGCGCGGAAAGGAATAG 60.179 55.000 20.25 0.00 39.68 1.73
775 1105 2.668632 TCCTGCGCGGAAAGGAAT 59.331 55.556 20.25 0.00 39.68 3.01
794 1124 6.092670 TGCTTTTATTGATCTCACAGTACAGC 59.907 38.462 0.00 0.00 0.00 4.40
799 1129 7.516198 ACTTTGCTTTTATTGATCTCACAGT 57.484 32.000 0.00 0.00 0.00 3.55
843 1173 2.682256 GAAAAACCGCAGCAGCAGCA 62.682 55.000 10.77 0.00 45.49 4.41
844 1174 2.018324 GAAAAACCGCAGCAGCAGC 61.018 57.895 0.82 0.00 42.27 5.25
845 1175 0.038892 ATGAAAAACCGCAGCAGCAG 60.039 50.000 0.82 0.00 42.27 4.24
856 1223 2.893489 ACTGAAGGCAGGGATGAAAAAC 59.107 45.455 0.00 0.00 46.60 2.43
859 1226 3.523157 TGATACTGAAGGCAGGGATGAAA 59.477 43.478 0.00 0.00 46.60 2.69
861 1228 2.763039 TGATACTGAAGGCAGGGATGA 58.237 47.619 0.00 0.00 46.60 2.92
864 1231 2.912956 ACTTTGATACTGAAGGCAGGGA 59.087 45.455 0.00 0.00 46.60 4.20
868 1235 3.307691 CCAGGACTTTGATACTGAAGGCA 60.308 47.826 0.00 0.00 32.40 4.75
869 1236 3.274288 CCAGGACTTTGATACTGAAGGC 58.726 50.000 0.00 0.00 32.86 4.35
871 1238 3.937706 CAGCCAGGACTTTGATACTGAAG 59.062 47.826 0.00 0.00 32.86 3.02
876 1243 4.327680 AGTTTCAGCCAGGACTTTGATAC 58.672 43.478 0.00 0.00 0.00 2.24
1016 1384 2.684881 GTTATGGTCATCACAAGGGCAG 59.315 50.000 0.00 0.00 0.00 4.85
1030 1398 6.094881 CGGAATAACATCAAACAGGTTATGGT 59.905 38.462 0.00 0.00 37.67 3.55
1056 1424 1.005748 TGAGGACTGCTCGCTTGTG 60.006 57.895 0.00 0.00 0.00 3.33
1143 1511 0.770557 AGCAGGGGTTACCACTTGGA 60.771 55.000 2.04 0.00 43.89 3.53
1188 1556 1.985662 ATCCCCCTCGCACGTTACA 60.986 57.895 0.00 0.00 0.00 2.41
1320 1688 1.201647 GTCAGCCTTGTCAGCGTAGTA 59.798 52.381 0.00 0.00 34.64 1.82
1458 1826 1.227089 CGACAGCTTCGGAGGGATG 60.227 63.158 9.54 0.00 44.60 3.51
1598 1966 2.416547 CCAACTGAAGCTGGTATTGACG 59.583 50.000 0.00 0.00 0.00 4.35
1762 2130 3.788227 AAGCAGGACTGTTACCAATGA 57.212 42.857 0.82 0.00 0.00 2.57
1770 2138 3.142174 GTTCTTGCTAAGCAGGACTGTT 58.858 45.455 0.00 0.00 43.96 3.16
1833 2201 1.093159 GATCAAGGTGCTGAAGCCTG 58.907 55.000 0.00 0.00 41.18 4.85
1839 2207 3.516700 TGAATGAGAGATCAAGGTGCTGA 59.483 43.478 0.00 0.00 0.00 4.26
1842 2210 4.260170 AGTTGAATGAGAGATCAAGGTGC 58.740 43.478 0.00 0.00 36.31 5.01
1884 2252 6.183360 TGTTTGGGAGATCAAAGAGTTTTTCC 60.183 38.462 0.00 0.00 37.31 3.13
1888 2256 6.070656 TGATGTTTGGGAGATCAAAGAGTTT 58.929 36.000 0.00 0.00 35.32 2.66
1983 2351 2.093973 AGTAGACAGATCCACAAAGCCG 60.094 50.000 0.00 0.00 0.00 5.52
2022 2390 0.801251 CACTTAGACAAGCAGGCAGC 59.199 55.000 0.00 0.00 46.19 5.25
2112 2480 5.865085 TGAGGTTGTTGACAATAGTTAGCT 58.135 37.500 0.00 0.00 38.24 3.32
2229 2597 7.174946 ACTCTCTGACAGTTTCTTTTGTTTGAA 59.825 33.333 1.59 0.00 0.00 2.69
2667 3037 1.679898 GGCTGGCTAACTCCACACT 59.320 57.895 0.00 0.00 31.74 3.55
2669 3039 1.207488 ATGGGCTGGCTAACTCCACA 61.207 55.000 0.00 0.00 31.74 4.17
2704 3074 7.493971 ACTCATAAAGTATCACATCTGCTTCAC 59.506 37.037 0.00 0.00 36.07 3.18
3272 3939 9.778741 CAAAGTATGGCTATAGGAACTTGAATA 57.221 33.333 1.04 0.00 41.75 1.75
3301 3972 5.224888 ACAATCAAGCTGTAACAAATGCAG 58.775 37.500 0.00 0.00 43.89 4.41
3571 4243 7.309770 ACCAGAAAGATAAGAAGACAGAGTT 57.690 36.000 0.00 0.00 0.00 3.01
3664 4336 7.212976 TGCCAAGAAAAGCATGTACAAATAAA 58.787 30.769 0.00 0.00 33.08 1.40
3673 4345 0.319405 GCCTGCCAAGAAAAGCATGT 59.681 50.000 0.00 0.00 38.56 3.21
3679 4351 2.290323 GGAGTAGAGCCTGCCAAGAAAA 60.290 50.000 0.00 0.00 0.00 2.29
3847 4519 4.213482 ACAAACCATAGTCGCTCAGTTTTC 59.787 41.667 0.00 0.00 0.00 2.29
3956 4628 8.210265 TGGACTATCTTCAATGCACATGTATTA 58.790 33.333 0.00 0.00 0.00 0.98
3973 4645 7.260603 GCATTAAAAACAAGCATGGACTATCT 58.739 34.615 0.00 0.00 0.00 1.98
3978 4650 4.389687 CAGGCATTAAAAACAAGCATGGAC 59.610 41.667 0.00 0.00 33.82 4.02
4000 4672 2.955660 CCTGTAAACCCAAAGAACTGCA 59.044 45.455 0.00 0.00 0.00 4.41
4001 4673 2.288213 GCCTGTAAACCCAAAGAACTGC 60.288 50.000 0.00 0.00 0.00 4.40
4002 4674 2.955660 TGCCTGTAAACCCAAAGAACTG 59.044 45.455 0.00 0.00 0.00 3.16
4035 4707 9.276590 TCAGCATTATTTTGTATGTATCTCTGG 57.723 33.333 0.00 0.00 0.00 3.86
4075 4747 1.756538 TGCAATGCTAGATGACTCGGA 59.243 47.619 6.82 0.00 0.00 4.55
4077 4749 1.863454 GGTGCAATGCTAGATGACTCG 59.137 52.381 6.82 0.00 0.00 4.18
4112 4784 8.635765 TGCTTCTGTAACCAGATTTTCTTATT 57.364 30.769 0.00 0.00 46.80 1.40
4118 4790 8.814038 ATAGAATGCTTCTGTAACCAGATTTT 57.186 30.769 8.21 0.00 46.80 1.82
4147 4824 2.014335 TCGACATGGCTGAACATCAG 57.986 50.000 0.00 3.00 46.90 2.90
4153 4838 4.377943 CGTTACAATTTCGACATGGCTGAA 60.378 41.667 0.00 0.00 0.00 3.02
4169 4854 5.007823 ACAAAAACATCGATGGACGTTACAA 59.992 36.000 28.09 0.00 43.13 2.41
4179 4864 6.254281 AGTTTCCCTACAAAAACATCGATG 57.746 37.500 23.68 23.68 37.74 3.84
4220 4905 6.317789 TCAAGTAGAATGCAACCAAAAGAG 57.682 37.500 0.00 0.00 0.00 2.85
4236 4921 3.873952 GAGCCCATAAGTGCTTCAAGTAG 59.126 47.826 0.00 0.00 38.11 2.57
4306 4991 2.162681 CGACAAAGCAAGAGGGGAAAT 58.837 47.619 0.00 0.00 0.00 2.17
4308 4993 0.472471 ACGACAAAGCAAGAGGGGAA 59.528 50.000 0.00 0.00 0.00 3.97
4325 5012 7.936950 TCTAAGCATCATCTAAATCTTCACG 57.063 36.000 0.00 0.00 0.00 4.35
4357 5044 4.525912 AAGCCAAATAAAACTGAGGCAG 57.474 40.909 0.00 0.00 44.34 4.85
4384 5078 6.817765 AACAAGTGTATTGAGTATTGGTGG 57.182 37.500 0.00 0.00 0.00 4.61
4385 5079 8.567948 AGAAAACAAGTGTATTGAGTATTGGTG 58.432 33.333 0.00 0.00 0.00 4.17
4386 5080 8.691661 AGAAAACAAGTGTATTGAGTATTGGT 57.308 30.769 0.00 0.00 0.00 3.67
4387 5081 9.398170 CAAGAAAACAAGTGTATTGAGTATTGG 57.602 33.333 0.00 0.00 0.00 3.16
4388 5082 9.398170 CCAAGAAAACAAGTGTATTGAGTATTG 57.602 33.333 0.00 0.00 0.00 1.90
4389 5083 9.131791 ACCAAGAAAACAAGTGTATTGAGTATT 57.868 29.630 0.00 0.00 0.00 1.89
4390 5084 8.691661 ACCAAGAAAACAAGTGTATTGAGTAT 57.308 30.769 0.00 0.00 0.00 2.12
4401 5095 9.495572 TTGTGAAATAAAACCAAGAAAACAAGT 57.504 25.926 0.00 0.00 0.00 3.16
4484 5182 3.855689 AAGAGCATGGATGGAAAAACG 57.144 42.857 0.00 0.00 0.00 3.60
4501 5199 3.610040 TGGAGCGCAGATTCTAAAAGA 57.390 42.857 11.47 0.00 0.00 2.52
4522 5220 7.494625 GCATAAAAACAGTAGTACATGCCTCTA 59.505 37.037 2.52 0.00 33.19 2.43
4526 5224 6.436843 AGCATAAAAACAGTAGTACATGCC 57.563 37.500 13.11 0.00 38.59 4.40
4528 5226 9.708222 GATGAAGCATAAAAACAGTAGTACATG 57.292 33.333 2.52 0.00 0.00 3.21
4529 5227 9.672673 AGATGAAGCATAAAAACAGTAGTACAT 57.327 29.630 2.52 0.00 0.00 2.29
4530 5228 8.935844 CAGATGAAGCATAAAAACAGTAGTACA 58.064 33.333 2.52 0.00 0.00 2.90
4554 5253 9.665264 GGAAACACTGTTTTCTTTAGTTATCAG 57.335 33.333 8.56 0.00 36.02 2.90
4595 5294 8.722342 AGCAAAAACAAATGTGTATACTAACG 57.278 30.769 4.17 0.00 36.80 3.18
4646 5345 9.838975 CAAGTGATTGTGCTATACATGTAAAAA 57.161 29.630 10.14 0.00 39.48 1.94
4647 5346 7.967854 GCAAGTGATTGTGCTATACATGTAAAA 59.032 33.333 10.14 0.32 39.48 1.52
4648 5347 7.415095 GGCAAGTGATTGTGCTATACATGTAAA 60.415 37.037 10.14 0.00 39.48 2.01
4649 5348 6.038161 GGCAAGTGATTGTGCTATACATGTAA 59.962 38.462 10.14 0.00 39.48 2.41
4650 5349 5.527214 GGCAAGTGATTGTGCTATACATGTA 59.473 40.000 8.27 8.27 39.48 2.29
4651 5350 4.336433 GGCAAGTGATTGTGCTATACATGT 59.664 41.667 2.69 2.69 39.48 3.21
4652 5351 4.577693 AGGCAAGTGATTGTGCTATACATG 59.422 41.667 0.00 0.00 39.48 3.21
4653 5352 4.785301 AGGCAAGTGATTGTGCTATACAT 58.215 39.130 0.00 0.00 39.48 2.29
4654 5353 4.220693 AGGCAAGTGATTGTGCTATACA 57.779 40.909 0.00 0.00 40.70 2.29
4655 5354 4.209288 CGTAGGCAAGTGATTGTGCTATAC 59.791 45.833 0.00 0.00 40.70 1.47
4656 5355 4.368315 CGTAGGCAAGTGATTGTGCTATA 58.632 43.478 0.00 0.00 40.70 1.31
4657 5356 3.198068 CGTAGGCAAGTGATTGTGCTAT 58.802 45.455 0.00 0.00 40.70 2.97
4658 5357 2.616960 CGTAGGCAAGTGATTGTGCTA 58.383 47.619 0.00 0.00 40.70 3.49
4659 5358 1.442769 CGTAGGCAAGTGATTGTGCT 58.557 50.000 0.00 0.00 40.70 4.40
4660 5359 0.179189 GCGTAGGCAAGTGATTGTGC 60.179 55.000 1.75 0.00 39.62 4.57
4661 5360 3.975992 GCGTAGGCAAGTGATTGTG 57.024 52.632 1.75 0.00 39.62 3.33
4678 5377 0.613012 ACCCTGCAATCCCTTTCTGC 60.613 55.000 0.00 0.00 36.60 4.26
4705 5404 9.447279 TCACTCCCCAATATCTCTTAAGAAATA 57.553 33.333 6.63 3.67 34.49 1.40
4713 5412 8.953665 AGATATTTTCACTCCCCAATATCTCTT 58.046 33.333 7.24 0.00 41.83 2.85
4723 5422 9.713713 GTAGAGATAAAGATATTTTCACTCCCC 57.286 37.037 0.00 0.00 0.00 4.81
4734 5433 8.943594 AAGAGGTTCGGTAGAGATAAAGATAT 57.056 34.615 0.00 0.00 0.00 1.63
4750 5453 7.549488 ACCAACTCAGATTTTATAAGAGGTTCG 59.451 37.037 4.32 0.00 0.00 3.95
4751 5454 8.794335 ACCAACTCAGATTTTATAAGAGGTTC 57.206 34.615 4.32 0.00 0.00 3.62
4752 5455 9.014297 CAACCAACTCAGATTTTATAAGAGGTT 57.986 33.333 0.00 0.00 32.94 3.50
4753 5456 7.121315 GCAACCAACTCAGATTTTATAAGAGGT 59.879 37.037 4.32 0.00 0.00 3.85
4754 5457 7.121168 TGCAACCAACTCAGATTTTATAAGAGG 59.879 37.037 4.32 0.00 0.00 3.69
4755 5458 8.044060 TGCAACCAACTCAGATTTTATAAGAG 57.956 34.615 0.00 0.00 0.00 2.85
4756 5459 7.665559 ACTGCAACCAACTCAGATTTTATAAGA 59.334 33.333 0.00 0.00 0.00 2.10
4757 5460 7.820648 ACTGCAACCAACTCAGATTTTATAAG 58.179 34.615 0.00 0.00 0.00 1.73
4758 5461 7.665559 AGACTGCAACCAACTCAGATTTTATAA 59.334 33.333 0.00 0.00 0.00 0.98
4759 5462 7.119699 CAGACTGCAACCAACTCAGATTTTATA 59.880 37.037 0.00 0.00 0.00 0.98
4760 5463 6.006449 AGACTGCAACCAACTCAGATTTTAT 58.994 36.000 0.00 0.00 0.00 1.40
4761 5464 5.239306 CAGACTGCAACCAACTCAGATTTTA 59.761 40.000 0.00 0.00 0.00 1.52
4764 5467 3.144506 CAGACTGCAACCAACTCAGATT 58.855 45.455 0.00 0.00 0.00 2.40
4779 5482 6.767524 AGTAATCTCTTAGTGGACAGACTG 57.232 41.667 0.00 0.00 0.00 3.51
4780 5483 7.607250 CAAAGTAATCTCTTAGTGGACAGACT 58.393 38.462 0.00 0.00 0.00 3.24
4856 5566 8.803235 GGGACAAACCTAGAACTTCAATTATTT 58.197 33.333 0.00 0.00 38.98 1.40
4857 5567 7.947890 TGGGACAAACCTAGAACTTCAATTATT 59.052 33.333 0.00 0.00 38.98 1.40
4858 5568 7.466804 TGGGACAAACCTAGAACTTCAATTAT 58.533 34.615 0.00 0.00 38.98 1.28
4859 5569 6.843752 TGGGACAAACCTAGAACTTCAATTA 58.156 36.000 0.00 0.00 38.98 1.40
4860 5570 5.701224 TGGGACAAACCTAGAACTTCAATT 58.299 37.500 0.00 0.00 38.98 2.32
4861 5571 5.319043 TGGGACAAACCTAGAACTTCAAT 57.681 39.130 0.00 0.00 38.98 2.57
4862 5572 4.781775 TGGGACAAACCTAGAACTTCAA 57.218 40.909 0.00 0.00 38.98 2.69
4902 5612 9.844257 AACAAATTTCTCCATAAAATTGGTCAA 57.156 25.926 2.71 0.00 38.63 3.18
4974 5684 8.954350 CACCAAATTAGTCTCATGAGATTCTTT 58.046 33.333 27.51 20.83 39.97 2.52
4975 5685 8.324306 TCACCAAATTAGTCTCATGAGATTCTT 58.676 33.333 27.51 16.84 39.97 2.52
4976 5686 7.855375 TCACCAAATTAGTCTCATGAGATTCT 58.145 34.615 27.51 21.76 39.97 2.40
4977 5687 8.674263 ATCACCAAATTAGTCTCATGAGATTC 57.326 34.615 27.51 16.00 39.97 2.52
4978 5688 8.270030 TGATCACCAAATTAGTCTCATGAGATT 58.730 33.333 27.51 24.85 39.97 2.40
4979 5689 7.799081 TGATCACCAAATTAGTCTCATGAGAT 58.201 34.615 27.51 18.00 39.97 2.75
4980 5690 7.186570 TGATCACCAAATTAGTCTCATGAGA 57.813 36.000 21.67 21.67 34.56 3.27
4981 5691 7.551974 AGTTGATCACCAAATTAGTCTCATGAG 59.448 37.037 17.07 17.07 36.36 2.90
4982 5692 7.397221 AGTTGATCACCAAATTAGTCTCATGA 58.603 34.615 0.00 0.00 36.36 3.07
4983 5693 7.201679 GGAGTTGATCACCAAATTAGTCTCATG 60.202 40.741 0.00 0.00 36.36 3.07
4984 5694 6.825721 GGAGTTGATCACCAAATTAGTCTCAT 59.174 38.462 0.00 0.00 36.36 2.90
4985 5695 6.173339 GGAGTTGATCACCAAATTAGTCTCA 58.827 40.000 0.00 0.00 36.36 3.27
4986 5696 5.586643 GGGAGTTGATCACCAAATTAGTCTC 59.413 44.000 0.00 0.00 36.36 3.36
4987 5697 5.251700 AGGGAGTTGATCACCAAATTAGTCT 59.748 40.000 0.00 0.00 36.36 3.24
4988 5698 5.501156 AGGGAGTTGATCACCAAATTAGTC 58.499 41.667 0.00 0.00 36.36 2.59
4989 5699 5.251700 AGAGGGAGTTGATCACCAAATTAGT 59.748 40.000 0.00 0.00 36.36 2.24
4990 5700 5.587844 CAGAGGGAGTTGATCACCAAATTAG 59.412 44.000 0.00 0.00 36.36 1.73
4991 5701 5.014123 ACAGAGGGAGTTGATCACCAAATTA 59.986 40.000 0.00 0.00 36.36 1.40
4992 5702 4.202609 ACAGAGGGAGTTGATCACCAAATT 60.203 41.667 0.00 0.00 36.36 1.82
4993 5703 3.331889 ACAGAGGGAGTTGATCACCAAAT 59.668 43.478 0.00 0.00 36.36 2.32
4994 5704 2.711009 ACAGAGGGAGTTGATCACCAAA 59.289 45.455 0.00 0.00 36.36 3.28
4995 5705 2.338809 ACAGAGGGAGTTGATCACCAA 58.661 47.619 0.00 0.00 27.93 3.67
4996 5706 2.030027 ACAGAGGGAGTTGATCACCA 57.970 50.000 0.00 0.00 27.93 4.17
4997 5707 2.303022 TGAACAGAGGGAGTTGATCACC 59.697 50.000 0.00 0.00 27.93 4.02
4998 5708 3.244215 TGTGAACAGAGGGAGTTGATCAC 60.244 47.826 0.00 7.62 43.36 3.06
4999 5709 2.972021 TGTGAACAGAGGGAGTTGATCA 59.028 45.455 0.00 0.00 0.00 2.92
5000 5710 3.685139 TGTGAACAGAGGGAGTTGATC 57.315 47.619 0.00 0.00 0.00 2.92
5001 5711 4.437682 TTTGTGAACAGAGGGAGTTGAT 57.562 40.909 0.00 0.00 0.00 2.57
5002 5712 3.924114 TTTGTGAACAGAGGGAGTTGA 57.076 42.857 0.00 0.00 0.00 3.18
5003 5713 7.066284 CCTTATATTTGTGAACAGAGGGAGTTG 59.934 40.741 0.00 0.00 0.00 3.16
5004 5714 7.112779 CCTTATATTTGTGAACAGAGGGAGTT 58.887 38.462 0.00 0.00 0.00 3.01
5005 5715 6.215636 ACCTTATATTTGTGAACAGAGGGAGT 59.784 38.462 0.00 0.00 0.00 3.85
5006 5716 6.540189 CACCTTATATTTGTGAACAGAGGGAG 59.460 42.308 0.00 0.00 31.66 4.30
5007 5717 6.012858 ACACCTTATATTTGTGAACAGAGGGA 60.013 38.462 0.00 0.00 34.18 4.20
5008 5718 6.180472 ACACCTTATATTTGTGAACAGAGGG 58.820 40.000 0.00 0.00 34.18 4.30
5009 5719 7.687941 AACACCTTATATTTGTGAACAGAGG 57.312 36.000 0.00 0.00 34.18 3.69
5010 5720 8.665685 GGTAACACCTTATATTTGTGAACAGAG 58.334 37.037 0.00 0.00 34.73 3.35
5011 5721 8.556213 GGTAACACCTTATATTTGTGAACAGA 57.444 34.615 0.00 0.00 34.73 3.41
5024 5734 9.014297 CTGATTCAGAAAAAGGTAACACCTTAT 57.986 33.333 10.88 3.86 45.11 1.73
5025 5735 8.215050 TCTGATTCAGAAAAAGGTAACACCTTA 58.785 33.333 13.96 0.00 46.45 2.69
5026 5736 7.277174 CTGATTCAGAAAAAGGTAACACCTT 57.723 36.000 8.00 4.73 46.59 3.50
5027 5737 6.601332 TCTGATTCAGAAAAAGGTAACACCT 58.399 36.000 13.96 0.00 43.61 4.00
5028 5738 6.877611 TCTGATTCAGAAAAAGGTAACACC 57.122 37.500 13.96 0.00 37.57 4.16
5029 5739 7.875971 ACATCTGATTCAGAAAAAGGTAACAC 58.124 34.615 19.73 0.00 44.04 3.32
5030 5740 9.739276 ATACATCTGATTCAGAAAAAGGTAACA 57.261 29.630 19.73 1.35 44.04 2.41
5039 5749 9.463443 CGTGTGTATATACATCTGATTCAGAAA 57.537 33.333 19.73 9.36 44.04 2.52
5040 5750 7.595130 GCGTGTGTATATACATCTGATTCAGAA 59.405 37.037 19.73 4.80 44.04 3.02
5041 5751 7.040409 AGCGTGTGTATATACATCTGATTCAGA 60.040 37.037 18.29 18.29 44.99 3.27
5042 5752 7.087007 AGCGTGTGTATATACATCTGATTCAG 58.913 38.462 18.27 7.38 38.63 3.02
5043 5753 6.981722 AGCGTGTGTATATACATCTGATTCA 58.018 36.000 18.27 7.32 38.63 2.57
5044 5754 7.875316 AAGCGTGTGTATATACATCTGATTC 57.125 36.000 18.27 4.86 38.63 2.52
5045 5755 9.411801 CTAAAGCGTGTGTATATACATCTGATT 57.588 33.333 18.27 12.34 38.63 2.57
5046 5756 8.577296 ACTAAAGCGTGTGTATATACATCTGAT 58.423 33.333 18.27 7.37 38.63 2.90
5047 5757 7.860872 CACTAAAGCGTGTGTATATACATCTGA 59.139 37.037 18.27 1.47 38.63 3.27
5048 5758 7.648112 ACACTAAAGCGTGTGTATATACATCTG 59.352 37.037 18.27 11.64 45.74 2.90
5049 5759 7.713750 ACACTAAAGCGTGTGTATATACATCT 58.286 34.615 18.27 10.44 45.74 2.90
5050 5760 7.925703 ACACTAAAGCGTGTGTATATACATC 57.074 36.000 18.27 13.14 45.74 3.06
5062 5772 3.783943 GTGAACAAACACACTAAAGCGTG 59.216 43.478 0.00 0.00 40.11 5.34
5063 5773 3.687698 AGTGAACAAACACACTAAAGCGT 59.312 39.130 0.00 0.00 44.06 5.07
5064 5774 4.201773 TGAGTGAACAAACACACTAAAGCG 60.202 41.667 0.00 0.00 45.54 4.68
5065 5775 5.229921 TGAGTGAACAAACACACTAAAGC 57.770 39.130 0.00 0.00 45.54 3.51
5066 5776 8.687824 AAAATGAGTGAACAAACACACTAAAG 57.312 30.769 0.00 0.00 45.54 1.85
5067 5777 9.781834 CTAAAATGAGTGAACAAACACACTAAA 57.218 29.630 0.00 0.00 45.54 1.85
5068 5778 8.952278 ACTAAAATGAGTGAACAAACACACTAA 58.048 29.630 0.00 0.00 45.54 2.24
5069 5779 8.500753 ACTAAAATGAGTGAACAAACACACTA 57.499 30.769 0.00 0.00 45.54 2.74
5071 5781 6.691388 GGACTAAAATGAGTGAACAAACACAC 59.309 38.462 0.00 0.00 42.45 3.82
5072 5782 6.457663 CGGACTAAAATGAGTGAACAAACACA 60.458 38.462 0.00 0.00 42.45 3.72
5073 5783 5.907391 CGGACTAAAATGAGTGAACAAACAC 59.093 40.000 0.00 0.00 40.60 3.32
5074 5784 5.587043 ACGGACTAAAATGAGTGAACAAACA 59.413 36.000 0.00 0.00 0.00 2.83
5075 5785 6.056428 ACGGACTAAAATGAGTGAACAAAC 57.944 37.500 0.00 0.00 0.00 2.93
5076 5786 7.442969 ACATACGGACTAAAATGAGTGAACAAA 59.557 33.333 0.00 0.00 0.00 2.83
5077 5787 6.932400 ACATACGGACTAAAATGAGTGAACAA 59.068 34.615 0.00 0.00 0.00 2.83
5078 5788 6.460781 ACATACGGACTAAAATGAGTGAACA 58.539 36.000 0.00 0.00 0.00 3.18
5079 5789 6.963049 ACATACGGACTAAAATGAGTGAAC 57.037 37.500 0.00 0.00 0.00 3.18
5080 5790 7.833786 ACTACATACGGACTAAAATGAGTGAA 58.166 34.615 0.00 0.00 0.00 3.18
5081 5791 7.400599 ACTACATACGGACTAAAATGAGTGA 57.599 36.000 0.00 0.00 0.00 3.41
5082 5792 6.696148 GGACTACATACGGACTAAAATGAGTG 59.304 42.308 0.00 0.00 0.00 3.51
5083 5793 6.379133 TGGACTACATACGGACTAAAATGAGT 59.621 38.462 0.00 0.00 0.00 3.41
5084 5794 6.802608 TGGACTACATACGGACTAAAATGAG 58.197 40.000 0.00 0.00 0.00 2.90
5085 5795 6.778834 TGGACTACATACGGACTAAAATGA 57.221 37.500 0.00 0.00 0.00 2.57
5119 5829 9.619316 CCGTTCACAAATATAAGATGTTTTGAA 57.381 29.630 0.00 0.00 34.13 2.69
5120 5830 9.004717 TCCGTTCACAAATATAAGATGTTTTGA 57.995 29.630 0.00 0.00 34.13 2.69
5121 5831 9.787532 ATCCGTTCACAAATATAAGATGTTTTG 57.212 29.630 0.00 0.00 35.66 2.44
5122 5832 9.787532 CATCCGTTCACAAATATAAGATGTTTT 57.212 29.630 0.00 0.00 0.00 2.43
5123 5833 8.405531 CCATCCGTTCACAAATATAAGATGTTT 58.594 33.333 0.00 0.00 0.00 2.83
5124 5834 7.773224 TCCATCCGTTCACAAATATAAGATGTT 59.227 33.333 0.00 0.00 0.00 2.71
5125 5835 7.279615 TCCATCCGTTCACAAATATAAGATGT 58.720 34.615 0.00 0.00 0.00 3.06
5126 5836 7.442364 ACTCCATCCGTTCACAAATATAAGATG 59.558 37.037 0.00 0.00 0.00 2.90
5127 5837 7.509546 ACTCCATCCGTTCACAAATATAAGAT 58.490 34.615 0.00 0.00 0.00 2.40
5128 5838 6.884832 ACTCCATCCGTTCACAAATATAAGA 58.115 36.000 0.00 0.00 0.00 2.10
5129 5839 8.833231 ATACTCCATCCGTTCACAAATATAAG 57.167 34.615 0.00 0.00 0.00 1.73
5130 5840 9.923143 CTATACTCCATCCGTTCACAAATATAA 57.077 33.333 0.00 0.00 0.00 0.98
5131 5841 9.304335 TCTATACTCCATCCGTTCACAAATATA 57.696 33.333 0.00 0.00 0.00 0.86
5132 5842 8.190326 TCTATACTCCATCCGTTCACAAATAT 57.810 34.615 0.00 0.00 0.00 1.28
5133 5843 7.591421 TCTATACTCCATCCGTTCACAAATA 57.409 36.000 0.00 0.00 0.00 1.40
5134 5844 6.479972 TCTATACTCCATCCGTTCACAAAT 57.520 37.500 0.00 0.00 0.00 2.32
5135 5845 5.925506 TCTATACTCCATCCGTTCACAAA 57.074 39.130 0.00 0.00 0.00 2.83
5136 5846 5.362717 ACATCTATACTCCATCCGTTCACAA 59.637 40.000 0.00 0.00 0.00 3.33
5137 5847 4.893524 ACATCTATACTCCATCCGTTCACA 59.106 41.667 0.00 0.00 0.00 3.58
5138 5848 5.455056 ACATCTATACTCCATCCGTTCAC 57.545 43.478 0.00 0.00 0.00 3.18
5139 5849 7.591421 TTAACATCTATACTCCATCCGTTCA 57.409 36.000 0.00 0.00 0.00 3.18
5169 5879 9.760077 CCTAAGTCAAACTAAGTCTACAGAAAA 57.240 33.333 0.00 0.00 0.00 2.29
5170 5880 9.139734 TCCTAAGTCAAACTAAGTCTACAGAAA 57.860 33.333 0.00 0.00 0.00 2.52
5171 5881 8.574737 GTCCTAAGTCAAACTAAGTCTACAGAA 58.425 37.037 0.00 0.00 0.00 3.02
5172 5882 7.722728 TGTCCTAAGTCAAACTAAGTCTACAGA 59.277 37.037 0.00 0.00 0.00 3.41
5173 5883 7.883217 TGTCCTAAGTCAAACTAAGTCTACAG 58.117 38.462 0.00 0.00 0.00 2.74
5174 5884 7.828508 TGTCCTAAGTCAAACTAAGTCTACA 57.171 36.000 0.00 0.00 0.00 2.74
5175 5885 8.976471 GTTTGTCCTAAGTCAAACTAAGTCTAC 58.024 37.037 11.75 0.00 43.96 2.59
5176 5886 8.698210 TGTTTGTCCTAAGTCAAACTAAGTCTA 58.302 33.333 17.37 0.00 46.02 2.59
5177 5887 7.494952 GTGTTTGTCCTAAGTCAAACTAAGTCT 59.505 37.037 17.37 0.00 46.02 3.24
5178 5888 7.279313 TGTGTTTGTCCTAAGTCAAACTAAGTC 59.721 37.037 17.37 7.42 46.02 3.01
5179 5889 7.107542 TGTGTTTGTCCTAAGTCAAACTAAGT 58.892 34.615 17.37 0.00 46.02 2.24
5180 5890 7.548196 TGTGTTTGTCCTAAGTCAAACTAAG 57.452 36.000 17.37 0.00 46.02 2.18
5181 5891 7.925043 TTGTGTTTGTCCTAAGTCAAACTAA 57.075 32.000 17.37 11.71 46.02 2.24
5182 5892 8.514330 AATTGTGTTTGTCCTAAGTCAAACTA 57.486 30.769 17.37 7.73 46.02 2.24
5183 5893 7.404671 AATTGTGTTTGTCCTAAGTCAAACT 57.595 32.000 17.37 0.00 46.02 2.66
5184 5894 9.744468 AATAATTGTGTTTGTCCTAAGTCAAAC 57.256 29.630 12.02 12.02 46.04 2.93
5187 5897 9.743057 CAAAATAATTGTGTTTGTCCTAAGTCA 57.257 29.630 0.00 0.00 0.00 3.41
5188 5898 9.959749 TCAAAATAATTGTGTTTGTCCTAAGTC 57.040 29.630 9.01 0.00 34.55 3.01
5192 5902 9.239002 CGTTTCAAAATAATTGTGTTTGTCCTA 57.761 29.630 9.01 0.00 34.55 2.94
5193 5903 7.223777 CCGTTTCAAAATAATTGTGTTTGTCCT 59.776 33.333 9.01 0.00 34.55 3.85
5194 5904 7.341446 CCGTTTCAAAATAATTGTGTTTGTCC 58.659 34.615 9.01 1.57 34.55 4.02
5195 5905 6.843779 GCCGTTTCAAAATAATTGTGTTTGTC 59.156 34.615 9.01 3.60 34.55 3.18
5196 5906 6.313905 TGCCGTTTCAAAATAATTGTGTTTGT 59.686 30.769 9.01 0.00 34.55 2.83
5197 5907 6.709643 TGCCGTTTCAAAATAATTGTGTTTG 58.290 32.000 0.00 0.00 34.29 2.93
5198 5908 6.018343 CCTGCCGTTTCAAAATAATTGTGTTT 60.018 34.615 0.00 0.00 0.00 2.83
5199 5909 5.465056 CCTGCCGTTTCAAAATAATTGTGTT 59.535 36.000 0.00 0.00 0.00 3.32
5200 5910 4.987912 CCTGCCGTTTCAAAATAATTGTGT 59.012 37.500 0.00 0.00 0.00 3.72
5201 5911 5.226396 TCCTGCCGTTTCAAAATAATTGTG 58.774 37.500 0.00 0.00 0.00 3.33
5202 5912 5.010617 ACTCCTGCCGTTTCAAAATAATTGT 59.989 36.000 0.00 0.00 0.00 2.71
5203 5913 5.469479 ACTCCTGCCGTTTCAAAATAATTG 58.531 37.500 0.00 0.00 0.00 2.32
5204 5914 5.722021 ACTCCTGCCGTTTCAAAATAATT 57.278 34.783 0.00 0.00 0.00 1.40
5205 5915 6.377146 ACATACTCCTGCCGTTTCAAAATAAT 59.623 34.615 0.00 0.00 0.00 1.28
5206 5916 5.708230 ACATACTCCTGCCGTTTCAAAATAA 59.292 36.000 0.00 0.00 0.00 1.40
5207 5917 5.250200 ACATACTCCTGCCGTTTCAAAATA 58.750 37.500 0.00 0.00 0.00 1.40
5208 5918 4.079253 ACATACTCCTGCCGTTTCAAAAT 58.921 39.130 0.00 0.00 0.00 1.82
5209 5919 3.482436 ACATACTCCTGCCGTTTCAAAA 58.518 40.909 0.00 0.00 0.00 2.44
5210 5920 3.134574 ACATACTCCTGCCGTTTCAAA 57.865 42.857 0.00 0.00 0.00 2.69
5211 5921 2.851263 ACATACTCCTGCCGTTTCAA 57.149 45.000 0.00 0.00 0.00 2.69
5212 5922 2.829720 ACTACATACTCCTGCCGTTTCA 59.170 45.455 0.00 0.00 0.00 2.69
5213 5923 3.521947 ACTACATACTCCTGCCGTTTC 57.478 47.619 0.00 0.00 0.00 2.78
5214 5924 4.097589 GTCTACTACATACTCCTGCCGTTT 59.902 45.833 0.00 0.00 0.00 3.60
5215 5925 3.631227 GTCTACTACATACTCCTGCCGTT 59.369 47.826 0.00 0.00 0.00 4.44
5216 5926 3.212685 GTCTACTACATACTCCTGCCGT 58.787 50.000 0.00 0.00 0.00 5.68
5217 5927 3.211865 TGTCTACTACATACTCCTGCCG 58.788 50.000 0.00 0.00 31.43 5.69
5256 6130 6.839124 AGGTTCATGCATTAAACAGATCAA 57.161 33.333 18.62 0.00 0.00 2.57
5266 6140 5.164620 TCACTGAGAAGGTTCATGCATTA 57.835 39.130 0.00 0.00 0.00 1.90
5311 6185 9.803315 TGCTAACTGACTTCTGTATTATTACTG 57.197 33.333 0.00 0.00 0.00 2.74
5314 6188 9.261180 GCATGCTAACTGACTTCTGTATTATTA 57.739 33.333 11.37 0.00 0.00 0.98
5315 6189 7.770433 TGCATGCTAACTGACTTCTGTATTATT 59.230 33.333 20.33 0.00 0.00 1.40
5316 6190 7.275183 TGCATGCTAACTGACTTCTGTATTAT 58.725 34.615 20.33 0.00 0.00 1.28
5317 6191 6.639563 TGCATGCTAACTGACTTCTGTATTA 58.360 36.000 20.33 0.00 0.00 0.98
5318 6192 5.491070 TGCATGCTAACTGACTTCTGTATT 58.509 37.500 20.33 0.00 0.00 1.89
5319 6193 5.089970 TGCATGCTAACTGACTTCTGTAT 57.910 39.130 20.33 0.00 0.00 2.29
5320 6194 4.535526 TGCATGCTAACTGACTTCTGTA 57.464 40.909 20.33 0.00 0.00 2.74
5321 6195 3.407424 TGCATGCTAACTGACTTCTGT 57.593 42.857 20.33 0.00 0.00 3.41
5322 6196 4.959596 AATGCATGCTAACTGACTTCTG 57.040 40.909 20.33 0.00 0.00 3.02
5323 6197 6.176183 AGTAAATGCATGCTAACTGACTTCT 58.824 36.000 20.33 1.88 0.00 2.85
5324 6198 6.428385 AGTAAATGCATGCTAACTGACTTC 57.572 37.500 20.33 0.00 0.00 3.01
5325 6199 7.921786 TTAGTAAATGCATGCTAACTGACTT 57.078 32.000 20.33 0.00 0.00 3.01
5326 6200 7.921786 TTTAGTAAATGCATGCTAACTGACT 57.078 32.000 20.33 15.59 0.00 3.41
5327 6201 8.237267 ACTTTTAGTAAATGCATGCTAACTGAC 58.763 33.333 20.33 9.29 0.00 3.51
5328 6202 8.236586 CACTTTTAGTAAATGCATGCTAACTGA 58.763 33.333 20.33 10.36 0.00 3.41
5329 6203 8.236586 TCACTTTTAGTAAATGCATGCTAACTG 58.763 33.333 20.33 7.35 0.00 3.16
5330 6204 8.335532 TCACTTTTAGTAAATGCATGCTAACT 57.664 30.769 20.33 17.35 0.00 2.24
5331 6205 8.964420 TTCACTTTTAGTAAATGCATGCTAAC 57.036 30.769 20.33 11.21 0.00 2.34
5332 6206 8.792633 ACTTCACTTTTAGTAAATGCATGCTAA 58.207 29.630 20.33 7.22 0.00 3.09
5333 6207 8.236586 CACTTCACTTTTAGTAAATGCATGCTA 58.763 33.333 20.33 5.73 0.00 3.49
5334 6208 7.086376 CACTTCACTTTTAGTAAATGCATGCT 58.914 34.615 20.33 0.40 0.00 3.79
5335 6209 6.183360 GCACTTCACTTTTAGTAAATGCATGC 60.183 38.462 11.82 11.82 0.00 4.06
5336 6210 7.086376 AGCACTTCACTTTTAGTAAATGCATG 58.914 34.615 14.34 5.72 29.66 4.06
5337 6211 7.219484 AGCACTTCACTTTTAGTAAATGCAT 57.781 32.000 14.34 0.00 29.66 3.96
5338 6212 6.633500 AGCACTTCACTTTTAGTAAATGCA 57.367 33.333 14.34 0.00 29.66 3.96
5339 6213 9.626045 ATTAAGCACTTCACTTTTAGTAAATGC 57.374 29.630 8.11 7.49 0.00 3.56
5341 6215 9.626045 GCATTAAGCACTTCACTTTTAGTAAAT 57.374 29.630 0.00 0.00 44.79 1.40
5359 6233 4.325472 GCTGACAAAGTTCATGCATTAAGC 59.675 41.667 0.00 0.00 45.96 3.09
5360 6234 5.706916 AGCTGACAAAGTTCATGCATTAAG 58.293 37.500 0.00 0.00 0.00 1.85
5361 6235 5.710513 AGCTGACAAAGTTCATGCATTAA 57.289 34.783 0.00 0.00 0.00 1.40
5362 6236 5.939883 AGTAGCTGACAAAGTTCATGCATTA 59.060 36.000 0.00 0.00 0.00 1.90
5363 6237 4.763793 AGTAGCTGACAAAGTTCATGCATT 59.236 37.500 0.00 0.00 0.00 3.56
5364 6238 4.330250 AGTAGCTGACAAAGTTCATGCAT 58.670 39.130 0.00 0.00 0.00 3.96
5365 6239 3.743521 AGTAGCTGACAAAGTTCATGCA 58.256 40.909 0.00 0.00 0.00 3.96
5366 6240 3.126000 GGAGTAGCTGACAAAGTTCATGC 59.874 47.826 0.00 0.00 0.00 4.06
5367 6241 3.686726 GGGAGTAGCTGACAAAGTTCATG 59.313 47.826 0.00 0.00 0.00 3.07
5368 6242 3.584848 AGGGAGTAGCTGACAAAGTTCAT 59.415 43.478 0.00 0.00 0.00 2.57
5369 6243 2.972713 AGGGAGTAGCTGACAAAGTTCA 59.027 45.455 0.00 0.00 0.00 3.18
5370 6244 3.686916 AGGGAGTAGCTGACAAAGTTC 57.313 47.619 0.00 0.00 0.00 3.01
5371 6245 4.347000 TGTTAGGGAGTAGCTGACAAAGTT 59.653 41.667 0.00 0.00 0.00 2.66
5372 6246 3.901844 TGTTAGGGAGTAGCTGACAAAGT 59.098 43.478 0.00 0.00 0.00 2.66
5373 6247 4.537135 TGTTAGGGAGTAGCTGACAAAG 57.463 45.455 0.00 0.00 0.00 2.77
5374 6248 4.777896 AGATGTTAGGGAGTAGCTGACAAA 59.222 41.667 0.00 0.00 0.00 2.83
5375 6249 4.353777 AGATGTTAGGGAGTAGCTGACAA 58.646 43.478 0.00 0.00 0.00 3.18
5376 6250 3.982516 AGATGTTAGGGAGTAGCTGACA 58.017 45.455 0.00 0.00 0.00 3.58
5377 6251 6.658188 ATAAGATGTTAGGGAGTAGCTGAC 57.342 41.667 0.00 0.00 0.00 3.51
5387 6261 9.982651 CGTCCCATAATATATAAGATGTTAGGG 57.017 37.037 0.00 0.00 0.00 3.53
5388 6262 9.982651 CCGTCCCATAATATATAAGATGTTAGG 57.017 37.037 6.52 0.00 0.00 2.69
5391 6265 8.705594 CCTCCGTCCCATAATATATAAGATGTT 58.294 37.037 6.52 0.00 0.00 2.71
5392 6266 7.290248 CCCTCCGTCCCATAATATATAAGATGT 59.710 40.741 6.52 0.00 0.00 3.06
5393 6267 7.509318 TCCCTCCGTCCCATAATATATAAGATG 59.491 40.741 0.00 0.00 0.00 2.90
5394 6268 7.601942 TCCCTCCGTCCCATAATATATAAGAT 58.398 38.462 0.00 0.00 0.00 2.40
5395 6269 6.988725 TCCCTCCGTCCCATAATATATAAGA 58.011 40.000 0.00 0.00 0.00 2.10
5396 6270 6.839657 ACTCCCTCCGTCCCATAATATATAAG 59.160 42.308 0.00 0.00 0.00 1.73
5397 6271 6.748969 ACTCCCTCCGTCCCATAATATATAA 58.251 40.000 0.00 0.00 0.00 0.98
5398 6272 6.351317 ACTCCCTCCGTCCCATAATATATA 57.649 41.667 0.00 0.00 0.00 0.86
5399 6273 5.222278 ACTCCCTCCGTCCCATAATATAT 57.778 43.478 0.00 0.00 0.00 0.86
5400 6274 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
5401 6275 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
5402 6276 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
5403 6277 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
5404 6278 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
5405 6279 3.140707 TGTATTACTCCCTCCGTCCCATA 59.859 47.826 0.00 0.00 0.00 2.74
5406 6280 2.090943 TGTATTACTCCCTCCGTCCCAT 60.091 50.000 0.00 0.00 0.00 4.00
5407 6281 1.288633 TGTATTACTCCCTCCGTCCCA 59.711 52.381 0.00 0.00 0.00 4.37
5408 6282 1.962100 CTGTATTACTCCCTCCGTCCC 59.038 57.143 0.00 0.00 0.00 4.46
5409 6283 2.941480 TCTGTATTACTCCCTCCGTCC 58.059 52.381 0.00 0.00 0.00 4.79
5410 6284 5.068723 TGAATTCTGTATTACTCCCTCCGTC 59.931 44.000 7.05 0.00 0.00 4.79
5411 6285 4.960469 TGAATTCTGTATTACTCCCTCCGT 59.040 41.667 7.05 0.00 0.00 4.69
5412 6286 5.531122 TGAATTCTGTATTACTCCCTCCG 57.469 43.478 7.05 0.00 0.00 4.63
5413 6287 9.660180 GATAATGAATTCTGTATTACTCCCTCC 57.340 37.037 7.05 0.00 0.00 4.30
5414 6288 9.660180 GGATAATGAATTCTGTATTACTCCCTC 57.340 37.037 7.05 0.00 0.00 4.30
5415 6289 8.314751 CGGATAATGAATTCTGTATTACTCCCT 58.685 37.037 7.05 0.00 0.00 4.20
5416 6290 7.549488 CCGGATAATGAATTCTGTATTACTCCC 59.451 40.741 7.05 4.99 0.00 4.30
5417 6291 8.311836 TCCGGATAATGAATTCTGTATTACTCC 58.688 37.037 0.00 9.78 0.00 3.85
5418 6292 9.141400 GTCCGGATAATGAATTCTGTATTACTC 57.859 37.037 7.81 3.55 0.00 2.59
5419 6293 8.871125 AGTCCGGATAATGAATTCTGTATTACT 58.129 33.333 7.81 0.00 0.00 2.24
5435 6309 5.423704 TCACCACAAATTAGTCCGGATAA 57.576 39.130 7.81 8.10 0.00 1.75
5441 6315 5.473504 ACACTTGATCACCACAAATTAGTCC 59.526 40.000 0.00 0.00 0.00 3.85
5453 6327 1.335872 CGGCCAAAACACTTGATCACC 60.336 52.381 2.24 0.00 0.00 4.02
5454 6328 1.336755 ACGGCCAAAACACTTGATCAC 59.663 47.619 2.24 0.00 0.00 3.06
5461 6335 0.180406 AGACAGACGGCCAAAACACT 59.820 50.000 2.24 0.00 0.00 3.55
5462 6336 0.307760 CAGACAGACGGCCAAAACAC 59.692 55.000 2.24 0.00 0.00 3.32
5463 6337 0.179234 TCAGACAGACGGCCAAAACA 59.821 50.000 2.24 0.00 0.00 2.83
5464 6338 1.264288 CTTCAGACAGACGGCCAAAAC 59.736 52.381 2.24 0.00 0.00 2.43
5467 6341 1.301716 GCTTCAGACAGACGGCCAA 60.302 57.895 2.24 0.00 0.00 4.52
5468 6342 2.343758 GCTTCAGACAGACGGCCA 59.656 61.111 2.24 0.00 0.00 5.36
5470 6344 2.343758 TGGCTTCAGACAGACGGC 59.656 61.111 0.00 0.00 40.87 5.68
5477 6360 0.944386 TTTTCACGCTGGCTTCAGAC 59.056 50.000 0.00 0.00 40.86 3.51
5490 6373 9.522804 TGTTAGGTACAATCAAAACATTTTCAC 57.477 29.630 0.00 0.00 32.64 3.18
5499 6382 7.499563 TGCAGTAAGTGTTAGGTACAATCAAAA 59.500 33.333 0.00 0.00 38.80 2.44
5504 6387 6.354794 TCTGCAGTAAGTGTTAGGTACAAT 57.645 37.500 14.67 0.00 38.80 2.71
5556 6439 8.927411 ACCTGCAGATATAAAGGCAAATATTTT 58.073 29.630 17.39 0.00 35.59 1.82
5569 6452 9.533831 TGATAGAGACATAACCTGCAGATATAA 57.466 33.333 17.39 0.00 0.00 0.98
5570 6453 9.706529 ATGATAGAGACATAACCTGCAGATATA 57.293 33.333 17.39 5.39 0.00 0.86
5571 6454 8.476447 CATGATAGAGACATAACCTGCAGATAT 58.524 37.037 17.39 10.61 0.00 1.63
5754 6637 4.314440 GTCGCCTGGACCTGTGCA 62.314 66.667 0.00 0.00 39.90 4.57
5823 6706 2.202987 GCCGCTATGCTGCTCACT 60.203 61.111 0.00 0.00 35.94 3.41
5987 6908 3.506067 GCTAAGTGGTGCCAAAACACTAT 59.494 43.478 0.00 0.00 44.08 2.12
6030 6951 6.931281 CGAGGTGAAGTGGTGATATCAATATT 59.069 38.462 7.07 0.31 0.00 1.28
6058 7097 3.402110 AGCTTGCCAAATTTACCTTTGC 58.598 40.909 0.00 0.00 35.28 3.68
6120 7159 2.353323 ACATCATGTAGCAGTGCACTG 58.647 47.619 37.09 37.09 46.40 3.66
6127 7166 7.905126 TCGTGTTTTATTACATCATGTAGCAG 58.095 34.615 0.00 0.00 33.92 4.24
6161 7201 0.099791 CGCCGTGTGAACAGGTTTTT 59.900 50.000 2.79 0.00 0.00 1.94
6279 7319 2.543445 CCTCTCATCTCTCATGTGTCGC 60.543 54.545 0.00 0.00 0.00 5.19
6353 7396 3.295093 TCAACTTTCCACTGGCATTCAA 58.705 40.909 0.00 0.00 0.00 2.69
6422 7465 8.443937 GTTTTCTGTAGATACTGACATTTGACC 58.556 37.037 0.00 0.00 34.54 4.02
6555 7602 1.964223 GACCTATCGAAGCTGGGATCA 59.036 52.381 3.23 0.00 0.00 2.92
6745 8016 4.216411 ACCTGGCATGTTACTTTCGTAT 57.784 40.909 0.00 0.00 0.00 3.06
6749 8020 4.082733 GGAAGAACCTGGCATGTTACTTTC 60.083 45.833 8.17 11.59 35.41 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.