Multiple sequence alignment - TraesCS4B01G072900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G072900 chr4B 100.000 5519 0 0 1 5519 68116734 68122252 0.000000e+00 10192.0
1 TraesCS4B01G072900 chr4B 92.063 63 3 2 1 63 35768619 35768679 2.740000e-13 87.9
2 TraesCS4B01G072900 chr4A 95.995 2322 78 10 3135 5443 552255931 552253612 0.000000e+00 3759.0
3 TraesCS4B01G072900 chr4A 91.327 1960 145 15 1143 3088 552257877 552255929 0.000000e+00 2654.0
4 TraesCS4B01G072900 chr4A 91.252 1589 121 11 1210 2785 533460163 533461746 0.000000e+00 2148.0
5 TraesCS4B01G072900 chr4A 86.821 1639 152 32 3135 4748 533462084 533463683 0.000000e+00 1772.0
6 TraesCS4B01G072900 chr4A 90.725 345 24 4 2742 3085 533461746 533462083 2.340000e-123 453.0
7 TraesCS4B01G072900 chr4A 87.248 298 21 12 510 804 552258939 552258656 1.920000e-84 324.0
8 TraesCS4B01G072900 chr4A 86.913 298 22 12 510 804 533458905 533459188 8.920000e-83 318.0
9 TraesCS4B01G072900 chr4A 88.636 264 23 5 947 1206 552258418 552258158 1.150000e-81 315.0
10 TraesCS4B01G072900 chr4A 82.222 360 28 14 149 506 552259305 552258980 1.510000e-70 278.0
11 TraesCS4B01G072900 chr4A 89.881 168 13 3 947 1113 533459426 533459590 4.330000e-51 213.0
12 TraesCS4B01G072900 chr4A 85.890 163 13 6 149 309 533571854 533571700 1.230000e-36 165.0
13 TraesCS4B01G072900 chr4A 84.663 163 15 6 149 309 533457678 533457832 2.660000e-33 154.0
14 TraesCS4B01G072900 chr4A 81.553 206 11 9 302 506 533458685 533458864 1.600000e-30 145.0
15 TraesCS4B01G072900 chr4A 96.774 62 1 1 5458 5519 552253626 552253566 9.780000e-18 102.0
16 TraesCS4B01G072900 chr4A 93.548 62 4 0 1143 1204 533459932 533459993 5.890000e-15 93.5
17 TraesCS4B01G072900 chr4D 95.686 2318 89 8 3135 5443 46622595 46624910 0.000000e+00 3716.0
18 TraesCS4B01G072900 chr4D 96.704 1790 46 5 3655 5443 47327549 47325772 0.000000e+00 2966.0
19 TraesCS4B01G072900 chr4D 91.049 1944 140 18 1157 3085 46620670 46622594 0.000000e+00 2595.0
20 TraesCS4B01G072900 chr4D 85.778 675 43 24 149 804 46619274 46619914 0.000000e+00 665.0
21 TraesCS4B01G072900 chr4D 90.840 262 19 4 947 1206 46620163 46620421 4.090000e-91 346.0
22 TraesCS4B01G072900 chr4D 94.690 113 6 0 3556 3668 47329554 47329442 5.680000e-40 176.0
23 TraesCS4B01G072900 chr4D 100.000 62 0 0 5458 5519 47325786 47325725 1.260000e-21 115.0
24 TraesCS4B01G072900 chr4D 98.387 62 1 0 5458 5519 46624896 46624957 5.850000e-20 110.0
25 TraesCS4B01G072900 chr1A 88.014 292 33 2 2357 2647 303852811 303853101 1.470000e-90 344.0
26 TraesCS4B01G072900 chr1A 79.535 215 17 14 2892 3083 303853347 303853557 1.610000e-25 128.0
27 TraesCS4B01G072900 chr1A 94.000 50 2 1 3099 3147 568391240 568391191 2.130000e-09 75.0
28 TraesCS4B01G072900 chr1D 86.986 292 37 1 2357 2648 239805433 239805723 1.480000e-85 327.0
29 TraesCS4B01G072900 chr1D 100.000 49 0 0 1 49 315408401 315408353 2.120000e-14 91.6
30 TraesCS4B01G072900 chr1D 100.000 40 0 0 3099 3138 59951885 59951846 2.130000e-09 75.0
31 TraesCS4B01G072900 chr1B 87.671 219 21 3 2368 2585 334241156 334241369 3.300000e-62 250.0
32 TraesCS4B01G072900 chr6A 93.333 150 10 0 1 150 39142672 39142523 7.200000e-54 222.0
33 TraesCS4B01G072900 chr7B 92.908 141 8 2 18 158 426524084 426523946 2.610000e-48 204.0
34 TraesCS4B01G072900 chr7B 100.000 49 0 0 1 49 150581882 150581930 2.120000e-14 91.6
35 TraesCS4B01G072900 chr6B 98.230 113 1 1 42 153 36375013 36374901 4.360000e-46 196.0
36 TraesCS4B01G072900 chr6B 96.581 117 3 1 42 157 417158201 417158317 5.640000e-45 193.0
37 TraesCS4B01G072900 chr6B 96.581 117 2 2 42 157 707744229 707744114 5.640000e-45 193.0
38 TraesCS4B01G072900 chr6B 91.803 61 2 3 2 62 468287294 468287237 1.270000e-11 82.4
39 TraesCS4B01G072900 chr6B 88.889 54 4 2 3086 3137 87007626 87007573 1.280000e-06 65.8
40 TraesCS4B01G072900 chr5A 98.214 112 1 1 42 152 561521540 561521429 1.570000e-45 195.0
41 TraesCS4B01G072900 chr2B 97.391 115 2 1 42 155 101081037 101080923 1.570000e-45 195.0
42 TraesCS4B01G072900 chr2B 94.309 123 6 1 42 163 733853406 733853284 2.620000e-43 187.0
43 TraesCS4B01G072900 chr2B 93.333 60 2 2 1 60 791611750 791611693 2.740000e-13 87.9
44 TraesCS4B01G072900 chr2B 97.826 46 0 1 3099 3144 796805924 796805880 1.650000e-10 78.7
45 TraesCS4B01G072900 chr5B 93.701 127 4 3 19 145 65245304 65245182 2.620000e-43 187.0
46 TraesCS4B01G072900 chr3B 100.000 49 0 0 1 49 511851437 511851389 2.120000e-14 91.6
47 TraesCS4B01G072900 chr5D 100.000 41 0 0 3099 3139 45654386 45654426 5.930000e-10 76.8
48 TraesCS4B01G072900 chr5D 97.674 43 0 1 3099 3140 173756250 173756292 7.670000e-09 73.1
49 TraesCS4B01G072900 chr7A 100.000 40 0 0 3099 3138 454049714 454049753 2.130000e-09 75.0
50 TraesCS4B01G072900 chr7A 97.561 41 1 0 3098 3138 85209359 85209399 2.760000e-08 71.3
51 TraesCS4B01G072900 chr3D 93.617 47 1 2 3103 3149 313603104 313603060 9.920000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G072900 chr4B 68116734 68122252 5518 False 10192.000000 10192 100.000000 1 5519 1 chr4B.!!$F2 5518
1 TraesCS4B01G072900 chr4A 552253566 552259305 5739 True 1238.666667 3759 90.367000 149 5519 6 chr4A.!!$R2 5370
2 TraesCS4B01G072900 chr4A 533457678 533463683 6005 False 662.062500 2148 88.169500 149 4748 8 chr4A.!!$F1 4599
3 TraesCS4B01G072900 chr4D 46619274 46624957 5683 False 1486.400000 3716 92.348000 149 5519 5 chr4D.!!$F1 5370
4 TraesCS4B01G072900 chr4D 47325725 47329554 3829 True 1085.666667 2966 97.131333 3556 5519 3 chr4D.!!$R1 1963
5 TraesCS4B01G072900 chr1A 303852811 303853557 746 False 236.000000 344 83.774500 2357 3083 2 chr1A.!!$F1 726

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
982 2028 0.032615 TTTTGGTTCACAGGGCTGGT 60.033 50.0 0.00 0.00 34.19 4.00 F
987 2033 0.035056 GTTCACAGGGCTGGTAGCAT 60.035 55.0 0.00 0.00 44.75 3.79 F
988 2034 0.253044 TTCACAGGGCTGGTAGCATC 59.747 55.0 0.00 0.00 44.75 3.91 F
2361 3947 0.820074 TGGTCGCCGTTTTCACCATT 60.820 50.0 0.00 0.00 33.83 3.16 F
3060 4775 1.148310 ATGCAGTTGTCGAAGTTCGG 58.852 50.0 24.18 8.82 40.88 4.30 F
4183 7820 0.108520 GCTGCCAATGGGATGTGTTG 60.109 55.0 0.00 0.00 35.59 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2543 4130 0.250513 AATGTCCTCGGTGCCTTCTC 59.749 55.000 0.00 0.0 0.00 2.87 R
2704 4291 0.814010 ACAGCCACGAACACAGGAAC 60.814 55.000 0.00 0.0 0.00 3.62 R
2781 4411 3.914312 TGAACGACAACTTTGGCAAAAA 58.086 36.364 14.43 0.0 35.35 1.94 R
3499 5227 0.032813 CAGGCCCACAAAGGATGGAT 60.033 55.000 0.00 0.0 39.87 3.41 R
4362 8011 1.226859 CTTCGCGTCGCCAATCCTA 60.227 57.895 12.44 0.0 0.00 2.94 R
5446 9096 2.068834 TGTTTTACCTCCCCGCAAAA 57.931 45.000 0.00 0.0 0.00 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.687572 GACCTAGAACTACGCGAATGA 57.312 47.619 15.93 0.00 0.00 2.57
21 22 3.361414 GACCTAGAACTACGCGAATGAC 58.639 50.000 15.93 0.66 0.00 3.06
22 23 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
23 24 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
24 25 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
25 26 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
26 27 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
27 28 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
28 29 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
29 30 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
30 31 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
31 32 3.247006 ACGCGAATGACTTATTCACCT 57.753 42.857 15.93 0.00 44.42 4.00
32 33 4.380841 ACGCGAATGACTTATTCACCTA 57.619 40.909 15.93 0.00 44.42 3.08
33 34 4.360563 ACGCGAATGACTTATTCACCTAG 58.639 43.478 15.93 0.00 44.42 3.02
34 35 4.097437 ACGCGAATGACTTATTCACCTAGA 59.903 41.667 15.93 0.00 44.42 2.43
35 36 4.441415 CGCGAATGACTTATTCACCTAGAC 59.559 45.833 0.00 0.00 44.42 2.59
36 37 4.441415 GCGAATGACTTATTCACCTAGACG 59.559 45.833 0.00 0.00 44.42 4.18
37 38 4.976731 CGAATGACTTATTCACCTAGACGG 59.023 45.833 0.00 0.00 44.42 4.79
38 39 5.220989 CGAATGACTTATTCACCTAGACGGA 60.221 44.000 0.00 0.00 44.42 4.69
39 40 5.776173 ATGACTTATTCACCTAGACGGAG 57.224 43.478 0.00 0.00 36.92 4.63
40 41 3.952323 TGACTTATTCACCTAGACGGAGG 59.048 47.826 0.00 0.00 42.89 4.30
61 62 4.532314 GTAGTAGTTACCACAAGCACCT 57.468 45.455 0.00 0.00 0.00 4.00
62 63 3.679824 AGTAGTTACCACAAGCACCTC 57.320 47.619 0.00 0.00 0.00 3.85
63 64 3.240302 AGTAGTTACCACAAGCACCTCT 58.760 45.455 0.00 0.00 0.00 3.69
64 65 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
65 66 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
66 67 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
67 68 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
68 69 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
69 70 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
70 71 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
71 72 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
72 73 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
73 74 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
74 75 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
75 76 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
76 77 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
77 78 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
78 79 7.550906 ACAAGCACCTCTCTCTTCATTAAATAC 59.449 37.037 0.00 0.00 0.00 1.89
79 80 6.276847 AGCACCTCTCTCTTCATTAAATACG 58.723 40.000 0.00 0.00 0.00 3.06
80 81 6.043411 GCACCTCTCTCTTCATTAAATACGT 58.957 40.000 0.00 0.00 0.00 3.57
81 82 6.019479 GCACCTCTCTCTTCATTAAATACGTG 60.019 42.308 0.00 0.00 0.00 4.49
82 83 6.019479 CACCTCTCTCTTCATTAAATACGTGC 60.019 42.308 0.00 0.00 0.00 5.34
83 84 5.463724 CCTCTCTCTTCATTAAATACGTGCC 59.536 44.000 0.00 0.00 0.00 5.01
84 85 5.972935 TCTCTCTTCATTAAATACGTGCCA 58.027 37.500 0.00 0.00 0.00 4.92
85 86 5.810587 TCTCTCTTCATTAAATACGTGCCAC 59.189 40.000 0.00 0.00 0.00 5.01
86 87 5.483811 TCTCTTCATTAAATACGTGCCACA 58.516 37.500 0.00 0.00 0.00 4.17
87 88 6.112734 TCTCTTCATTAAATACGTGCCACAT 58.887 36.000 0.00 0.00 0.00 3.21
88 89 7.269316 TCTCTTCATTAAATACGTGCCACATA 58.731 34.615 0.00 0.00 0.00 2.29
89 90 7.766738 TCTCTTCATTAAATACGTGCCACATAA 59.233 33.333 0.00 0.00 0.00 1.90
90 91 7.915508 TCTTCATTAAATACGTGCCACATAAG 58.084 34.615 0.00 0.00 0.00 1.73
91 92 6.055231 TCATTAAATACGTGCCACATAAGC 57.945 37.500 0.00 0.00 0.00 3.09
92 93 5.586643 TCATTAAATACGTGCCACATAAGCA 59.413 36.000 0.00 0.00 38.08 3.91
93 94 5.881777 TTAAATACGTGCCACATAAGCAA 57.118 34.783 0.00 0.00 43.02 3.91
94 95 4.775058 AAATACGTGCCACATAAGCAAA 57.225 36.364 0.00 0.00 43.02 3.68
95 96 4.355543 AATACGTGCCACATAAGCAAAG 57.644 40.909 0.00 0.00 43.02 2.77
96 97 1.604604 ACGTGCCACATAAGCAAAGT 58.395 45.000 0.00 0.00 43.02 2.66
97 98 1.953686 ACGTGCCACATAAGCAAAGTT 59.046 42.857 0.00 0.00 43.02 2.66
98 99 2.287547 ACGTGCCACATAAGCAAAGTTG 60.288 45.455 0.00 0.00 43.02 3.16
99 100 2.287547 CGTGCCACATAAGCAAAGTTGT 60.288 45.455 0.00 0.00 43.02 3.32
100 101 3.058570 CGTGCCACATAAGCAAAGTTGTA 60.059 43.478 0.00 0.00 43.02 2.41
101 102 4.379394 CGTGCCACATAAGCAAAGTTGTAT 60.379 41.667 0.00 0.00 43.02 2.29
102 103 5.469479 GTGCCACATAAGCAAAGTTGTATT 58.531 37.500 0.00 0.00 43.02 1.89
103 104 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
104 105 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
105 106 5.336372 GCCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 0.00 3.53
106 107 6.324819 CCACATAAGCAAAGTTGTATTGGAG 58.675 40.000 0.00 0.00 0.00 3.86
107 108 6.071952 CCACATAAGCAAAGTTGTATTGGAGT 60.072 38.462 0.00 0.00 0.00 3.85
108 109 7.120579 CCACATAAGCAAAGTTGTATTGGAGTA 59.879 37.037 0.00 0.00 0.00 2.59
109 110 8.677300 CACATAAGCAAAGTTGTATTGGAGTAT 58.323 33.333 0.00 0.00 0.00 2.12
110 111 8.677300 ACATAAGCAAAGTTGTATTGGAGTATG 58.323 33.333 0.00 0.00 0.00 2.39
111 112 8.677300 CATAAGCAAAGTTGTATTGGAGTATGT 58.323 33.333 0.00 0.00 0.00 2.29
112 113 6.500684 AGCAAAGTTGTATTGGAGTATGTG 57.499 37.500 0.00 0.00 0.00 3.21
113 114 6.237901 AGCAAAGTTGTATTGGAGTATGTGA 58.762 36.000 0.00 0.00 0.00 3.58
114 115 6.886459 AGCAAAGTTGTATTGGAGTATGTGAT 59.114 34.615 0.00 0.00 0.00 3.06
115 116 6.968904 GCAAAGTTGTATTGGAGTATGTGATG 59.031 38.462 0.00 0.00 0.00 3.07
116 117 7.362056 GCAAAGTTGTATTGGAGTATGTGATGT 60.362 37.037 0.00 0.00 0.00 3.06
117 118 8.514594 CAAAGTTGTATTGGAGTATGTGATGTT 58.485 33.333 0.00 0.00 0.00 2.71
118 119 9.733556 AAAGTTGTATTGGAGTATGTGATGTTA 57.266 29.630 0.00 0.00 0.00 2.41
119 120 8.718102 AGTTGTATTGGAGTATGTGATGTTAC 57.282 34.615 0.00 0.00 0.00 2.50
120 121 8.540388 AGTTGTATTGGAGTATGTGATGTTACT 58.460 33.333 0.00 0.00 0.00 2.24
121 122 8.818057 GTTGTATTGGAGTATGTGATGTTACTC 58.182 37.037 2.26 2.26 42.27 2.59
129 130 8.859517 GAGTATGTGATGTTACTCCTAAGTTC 57.140 38.462 0.00 0.00 38.81 3.01
130 131 7.783042 AGTATGTGATGTTACTCCTAAGTTCC 58.217 38.462 0.00 0.00 36.92 3.62
131 132 6.875972 ATGTGATGTTACTCCTAAGTTCCT 57.124 37.500 0.00 0.00 36.92 3.36
132 133 6.282199 TGTGATGTTACTCCTAAGTTCCTC 57.718 41.667 0.00 0.00 36.92 3.71
133 134 5.187186 TGTGATGTTACTCCTAAGTTCCTCC 59.813 44.000 0.00 0.00 36.92 4.30
134 135 4.715297 TGATGTTACTCCTAAGTTCCTCCC 59.285 45.833 0.00 0.00 36.92 4.30
135 136 3.447950 TGTTACTCCTAAGTTCCTCCCC 58.552 50.000 0.00 0.00 36.92 4.81
136 137 3.181404 TGTTACTCCTAAGTTCCTCCCCA 60.181 47.826 0.00 0.00 36.92 4.96
137 138 1.954035 ACTCCTAAGTTCCTCCCCAC 58.046 55.000 0.00 0.00 28.74 4.61
138 139 1.437547 ACTCCTAAGTTCCTCCCCACT 59.562 52.381 0.00 0.00 28.74 4.00
139 140 1.834263 CTCCTAAGTTCCTCCCCACTG 59.166 57.143 0.00 0.00 0.00 3.66
140 141 1.151413 TCCTAAGTTCCTCCCCACTGT 59.849 52.381 0.00 0.00 0.00 3.55
141 142 1.279271 CCTAAGTTCCTCCCCACTGTG 59.721 57.143 0.00 0.00 0.00 3.66
142 143 2.257207 CTAAGTTCCTCCCCACTGTGA 58.743 52.381 9.86 0.00 0.00 3.58
143 144 0.765510 AAGTTCCTCCCCACTGTGAC 59.234 55.000 9.86 0.00 0.00 3.67
144 145 1.128188 AGTTCCTCCCCACTGTGACC 61.128 60.000 9.86 0.00 0.00 4.02
145 146 1.074090 TTCCTCCCCACTGTGACCA 60.074 57.895 9.86 0.00 0.00 4.02
146 147 1.127567 TTCCTCCCCACTGTGACCAG 61.128 60.000 9.86 1.37 44.68 4.00
147 148 2.348998 CTCCCCACTGTGACCAGC 59.651 66.667 9.86 0.00 42.81 4.85
151 152 2.519622 CCCACTGTGACCAGCCTCA 61.520 63.158 9.86 0.00 42.81 3.86
166 167 1.735386 CCTCAACATGACTCTGCAGG 58.265 55.000 15.13 7.28 0.00 4.85
174 182 0.335019 TGACTCTGCAGGGCTAGGTA 59.665 55.000 15.27 0.00 0.00 3.08
175 183 0.747852 GACTCTGCAGGGCTAGGTAC 59.252 60.000 15.27 0.00 0.00 3.34
176 184 0.336737 ACTCTGCAGGGCTAGGTACT 59.663 55.000 15.27 0.00 46.37 2.73
207 215 4.031636 AGAGCTCTTTTGCTTCTTGGAT 57.968 40.909 11.45 0.00 44.17 3.41
241 249 4.503123 GGCAGTTGGAGGTTTAATTGCTTT 60.503 41.667 0.00 0.00 38.88 3.51
262 270 2.677875 CTGTTGGCTTGGGCTCCC 60.678 66.667 0.00 0.00 38.73 4.30
312 1182 1.134461 TGCTGCATTGTTGGCTTGTTT 60.134 42.857 0.00 0.00 0.00 2.83
325 1195 3.069872 TGGCTTGTTTAACGGAGTGACTA 59.930 43.478 0.00 0.00 45.00 2.59
365 1240 0.938713 CTCTAGAGCAGCAGCAATGC 59.061 55.000 6.86 0.00 45.49 3.56
366 1241 0.251073 TCTAGAGCAGCAGCAATGCA 59.749 50.000 8.35 0.00 46.31 3.96
367 1242 1.092348 CTAGAGCAGCAGCAATGCAA 58.908 50.000 8.35 0.00 46.31 4.08
368 1243 1.676529 CTAGAGCAGCAGCAATGCAAT 59.323 47.619 8.35 0.13 46.31 3.56
389 1264 0.809385 CTGGTGCAGGCATCTTTGAG 59.191 55.000 6.06 0.00 0.00 3.02
414 1289 2.851195 CAGGTAACCTGTTTGCAGTCT 58.149 47.619 0.00 0.00 45.82 3.24
415 1290 2.808543 CAGGTAACCTGTTTGCAGTCTC 59.191 50.000 0.00 0.00 45.82 3.36
416 1291 2.706190 AGGTAACCTGTTTGCAGTCTCT 59.294 45.455 0.00 0.00 41.02 3.10
417 1292 3.901844 AGGTAACCTGTTTGCAGTCTCTA 59.098 43.478 0.00 0.00 41.02 2.43
418 1293 4.532521 AGGTAACCTGTTTGCAGTCTCTAT 59.467 41.667 0.00 0.00 41.02 1.98
419 1294 5.013183 AGGTAACCTGTTTGCAGTCTCTATT 59.987 40.000 0.00 0.00 41.02 1.73
420 1295 5.705905 GGTAACCTGTTTGCAGTCTCTATTT 59.294 40.000 0.00 0.00 41.02 1.40
421 1296 5.948992 AACCTGTTTGCAGTCTCTATTTC 57.051 39.130 0.00 0.00 41.02 2.17
422 1297 5.234466 ACCTGTTTGCAGTCTCTATTTCT 57.766 39.130 0.00 0.00 41.02 2.52
423 1298 5.241662 ACCTGTTTGCAGTCTCTATTTCTC 58.758 41.667 0.00 0.00 41.02 2.87
424 1299 5.012561 ACCTGTTTGCAGTCTCTATTTCTCT 59.987 40.000 0.00 0.00 41.02 3.10
425 1300 5.350914 CCTGTTTGCAGTCTCTATTTCTCTG 59.649 44.000 0.00 0.00 41.02 3.35
455 1330 4.903054 TCAAGATTGTTCATCTCTGCTGT 58.097 39.130 0.00 0.00 41.93 4.40
509 1385 3.708563 TTTTGCCTTTCTTCAAGACCG 57.291 42.857 0.00 0.00 33.80 4.79
510 1386 2.631160 TTGCCTTTCTTCAAGACCGA 57.369 45.000 0.00 0.00 33.80 4.69
511 1387 1.878953 TGCCTTTCTTCAAGACCGAC 58.121 50.000 0.00 0.00 33.80 4.79
515 1428 2.059541 CTTTCTTCAAGACCGACCGAC 58.940 52.381 0.00 0.00 33.80 4.79
524 1437 1.135083 AGACCGACCGACATGAATGAC 60.135 52.381 0.00 0.00 0.00 3.06
539 1452 7.212976 ACATGAATGACTACCAGCATAAGTAG 58.787 38.462 0.00 0.00 41.44 2.57
556 1469 5.810080 AAGTAGTCAGTAGCTTTGAGGTT 57.190 39.130 0.00 0.00 0.00 3.50
557 1470 5.810080 AGTAGTCAGTAGCTTTGAGGTTT 57.190 39.130 0.00 0.00 0.00 3.27
558 1471 5.542779 AGTAGTCAGTAGCTTTGAGGTTTG 58.457 41.667 0.00 0.00 0.00 2.93
559 1472 4.689612 AGTCAGTAGCTTTGAGGTTTGA 57.310 40.909 0.00 0.00 0.00 2.69
560 1473 4.636249 AGTCAGTAGCTTTGAGGTTTGAG 58.364 43.478 0.00 0.00 0.00 3.02
561 1474 3.187432 GTCAGTAGCTTTGAGGTTTGAGC 59.813 47.826 0.00 0.00 35.42 4.26
562 1475 3.071602 TCAGTAGCTTTGAGGTTTGAGCT 59.928 43.478 0.00 2.10 46.40 4.09
638 1554 4.154347 CCTCTGCCCTGCGTCCTC 62.154 72.222 0.00 0.00 0.00 3.71
756 1686 6.205784 TCTTTACTTGCTTTGATTTGTTCGG 58.794 36.000 0.00 0.00 0.00 4.30
768 1698 4.925054 TGATTTGTTCGGTCGTTTACTAGG 59.075 41.667 0.00 0.00 0.00 3.02
769 1699 4.320608 TTTGTTCGGTCGTTTACTAGGT 57.679 40.909 0.00 0.00 0.00 3.08
770 1700 5.446143 TTTGTTCGGTCGTTTACTAGGTA 57.554 39.130 0.00 0.00 0.00 3.08
771 1701 4.685169 TGTTCGGTCGTTTACTAGGTAG 57.315 45.455 0.00 0.00 0.00 3.18
783 1713 8.507249 TCGTTTACTAGGTAGTGTTTCTACTTC 58.493 37.037 0.00 0.00 45.86 3.01
785 1715 7.709149 TTACTAGGTAGTGTTTCTACTTCCC 57.291 40.000 0.00 0.00 45.86 3.97
786 1716 5.648247 ACTAGGTAGTGTTTCTACTTCCCA 58.352 41.667 0.00 0.00 45.86 4.37
787 1717 4.886496 AGGTAGTGTTTCTACTTCCCAC 57.114 45.455 5.26 0.00 45.86 4.61
789 1719 3.581770 GGTAGTGTTTCTACTTCCCACCT 59.418 47.826 5.26 0.00 45.86 4.00
790 1720 3.771577 AGTGTTTCTACTTCCCACCTG 57.228 47.619 0.00 0.00 0.00 4.00
791 1721 3.314693 AGTGTTTCTACTTCCCACCTGA 58.685 45.455 0.00 0.00 0.00 3.86
792 1722 3.325135 AGTGTTTCTACTTCCCACCTGAG 59.675 47.826 0.00 0.00 0.00 3.35
793 1723 2.038557 TGTTTCTACTTCCCACCTGAGC 59.961 50.000 0.00 0.00 0.00 4.26
813 1757 2.715046 CCTCCTTGCTGCAGAAACATA 58.285 47.619 20.43 0.00 0.00 2.29
814 1758 3.084039 CCTCCTTGCTGCAGAAACATAA 58.916 45.455 20.43 1.07 0.00 1.90
815 1759 3.119708 CCTCCTTGCTGCAGAAACATAAC 60.120 47.826 20.43 0.00 0.00 1.89
818 1762 3.435327 CCTTGCTGCAGAAACATAACGTA 59.565 43.478 20.43 0.00 0.00 3.57
819 1763 4.436050 CCTTGCTGCAGAAACATAACGTAG 60.436 45.833 20.43 0.00 0.00 3.51
821 1765 3.926527 TGCTGCAGAAACATAACGTAGAG 59.073 43.478 20.43 0.00 0.00 2.43
822 1766 3.927142 GCTGCAGAAACATAACGTAGAGT 59.073 43.478 20.43 0.00 0.00 3.24
823 1767 4.201628 GCTGCAGAAACATAACGTAGAGTG 60.202 45.833 20.43 0.00 0.00 3.51
824 1768 4.242475 TGCAGAAACATAACGTAGAGTGG 58.758 43.478 0.00 0.00 0.00 4.00
825 1769 3.062234 GCAGAAACATAACGTAGAGTGGC 59.938 47.826 0.00 0.00 0.00 5.01
827 1771 4.688879 CAGAAACATAACGTAGAGTGGCAA 59.311 41.667 0.00 0.00 0.00 4.52
844 1801 1.467734 GCAACTGGCAGATCTTCTGTG 59.532 52.381 23.66 6.66 45.94 3.66
848 1805 2.093764 ACTGGCAGATCTTCTGTGCTAC 60.094 50.000 23.66 0.00 45.94 3.58
854 1811 4.564769 GCAGATCTTCTGTGCTACTTACAC 59.435 45.833 6.40 0.00 45.94 2.90
858 1815 7.062839 CAGATCTTCTGTGCTACTTACACTTTC 59.937 40.741 0.00 0.00 39.58 2.62
859 1816 5.539048 TCTTCTGTGCTACTTACACTTTCC 58.461 41.667 0.00 0.00 38.86 3.13
860 1817 4.948341 TCTGTGCTACTTACACTTTCCA 57.052 40.909 0.00 0.00 38.86 3.53
862 1819 5.865085 TCTGTGCTACTTACACTTTCCAAT 58.135 37.500 0.00 0.00 38.86 3.16
863 1820 6.999950 TCTGTGCTACTTACACTTTCCAATA 58.000 36.000 0.00 0.00 38.86 1.90
864 1821 7.097192 TCTGTGCTACTTACACTTTCCAATAG 58.903 38.462 0.00 0.00 38.86 1.73
865 1822 6.999950 TGTGCTACTTACACTTTCCAATAGA 58.000 36.000 0.00 0.00 38.86 1.98
866 1823 7.446769 TGTGCTACTTACACTTTCCAATAGAA 58.553 34.615 0.00 0.00 38.86 2.10
876 1886 6.126863 ACTTTCCAATAGAATGTGTGGAGA 57.873 37.500 0.00 0.00 41.10 3.71
895 1905 5.991606 TGGAGAGACATAACACAAGAACAAG 59.008 40.000 0.00 0.00 0.00 3.16
896 1906 6.183360 TGGAGAGACATAACACAAGAACAAGA 60.183 38.462 0.00 0.00 0.00 3.02
898 1908 7.389053 GGAGAGACATAACACAAGAACAAGATT 59.611 37.037 0.00 0.00 0.00 2.40
904 1914 8.784043 ACATAACACAAGAACAAGATTTACTCC 58.216 33.333 0.00 0.00 0.00 3.85
905 1915 9.003658 CATAACACAAGAACAAGATTTACTCCT 57.996 33.333 0.00 0.00 0.00 3.69
906 1916 7.497925 AACACAAGAACAAGATTTACTCCTC 57.502 36.000 0.00 0.00 0.00 3.71
907 1917 6.591935 ACACAAGAACAAGATTTACTCCTCA 58.408 36.000 0.00 0.00 0.00 3.86
908 1918 7.227156 ACACAAGAACAAGATTTACTCCTCAT 58.773 34.615 0.00 0.00 0.00 2.90
909 1919 8.375506 ACACAAGAACAAGATTTACTCCTCATA 58.624 33.333 0.00 0.00 0.00 2.15
930 1940 7.371043 TCATACTAGGAGGAAGAAATTACCCT 58.629 38.462 0.00 0.00 0.00 4.34
931 1941 7.849904 TCATACTAGGAGGAAGAAATTACCCTT 59.150 37.037 0.00 0.00 0.00 3.95
935 1945 3.444034 GGAGGAAGAAATTACCCTTGTGC 59.556 47.826 0.00 0.00 0.00 4.57
936 1946 4.336280 GAGGAAGAAATTACCCTTGTGCT 58.664 43.478 0.00 0.00 0.00 4.40
937 1947 4.740902 AGGAAGAAATTACCCTTGTGCTT 58.259 39.130 0.00 0.00 0.00 3.91
938 1948 4.524328 AGGAAGAAATTACCCTTGTGCTTG 59.476 41.667 0.00 0.00 0.00 4.01
941 1951 3.573967 AGAAATTACCCTTGTGCTTGTGG 59.426 43.478 0.00 0.00 0.00 4.17
942 1952 2.675658 ATTACCCTTGTGCTTGTGGT 57.324 45.000 0.00 0.00 0.00 4.16
943 1953 2.445682 TTACCCTTGTGCTTGTGGTT 57.554 45.000 0.00 0.00 0.00 3.67
944 1954 3.579534 TTACCCTTGTGCTTGTGGTTA 57.420 42.857 0.00 0.00 0.00 2.85
945 1955 1.981256 ACCCTTGTGCTTGTGGTTAG 58.019 50.000 0.00 0.00 0.00 2.34
955 2001 4.396166 GTGCTTGTGGTTAGCTGACATTAT 59.604 41.667 11.15 0.00 39.38 1.28
959 2005 5.420725 TGTGGTTAGCTGACATTATCTGT 57.579 39.130 11.15 0.00 42.15 3.41
974 2020 9.906660 GACATTATCTGTAAATTTTGGTTCACA 57.093 29.630 0.00 0.00 38.54 3.58
977 2023 5.782893 TCTGTAAATTTTGGTTCACAGGG 57.217 39.130 13.79 0.00 35.29 4.45
982 2028 0.032615 TTTTGGTTCACAGGGCTGGT 60.033 50.000 0.00 0.00 34.19 4.00
983 2029 0.847373 TTTGGTTCACAGGGCTGGTA 59.153 50.000 0.00 0.00 34.19 3.25
984 2030 0.400213 TTGGTTCACAGGGCTGGTAG 59.600 55.000 0.00 0.00 34.19 3.18
985 2031 1.377333 GGTTCACAGGGCTGGTAGC 60.377 63.158 0.00 0.00 41.46 3.58
986 2032 1.374947 GTTCACAGGGCTGGTAGCA 59.625 57.895 2.99 0.00 44.75 3.49
987 2033 0.035056 GTTCACAGGGCTGGTAGCAT 60.035 55.000 0.00 0.00 44.75 3.79
988 2034 0.253044 TTCACAGGGCTGGTAGCATC 59.747 55.000 0.00 0.00 44.75 3.91
989 2035 1.153086 CACAGGGCTGGTAGCATCC 60.153 63.158 6.24 6.24 44.75 3.51
997 2043 3.096852 TGGTAGCATCCCAGAACCA 57.903 52.632 0.00 0.00 37.88 3.67
1148 2196 4.225942 TCTCAAGTGTGCCCAGATATCTTT 59.774 41.667 1.33 0.00 0.00 2.52
1169 2572 5.826601 TTTGTTCACAGTTAACATGCAGA 57.173 34.783 8.61 3.25 36.75 4.26
1200 2603 3.568538 GTTTGTGCTGAATAGTTGCCTG 58.431 45.455 0.00 0.00 0.00 4.85
1204 2607 2.611292 GTGCTGAATAGTTGCCTGCTAG 59.389 50.000 0.00 0.00 0.00 3.42
1208 2611 4.450419 GCTGAATAGTTGCCTGCTAGTATG 59.550 45.833 2.46 0.00 0.00 2.39
1283 2853 9.965824 CAGTTCTGGTGTTAAACAAATAGAAAT 57.034 29.630 0.00 0.00 30.71 2.17
1313 2883 6.857777 ATAGATTCTGAACACATTGCTAGC 57.142 37.500 8.10 8.10 0.00 3.42
1342 2912 8.736244 GCAAATTCTGTAGTTAAACTAATGGGA 58.264 33.333 0.00 0.00 31.62 4.37
1402 2975 9.651913 AAAATTGTAGCAAAAGAACTTCAAAGA 57.348 25.926 0.00 0.00 28.88 2.52
1403 2976 8.634475 AATTGTAGCAAAAGAACTTCAAAGAC 57.366 30.769 0.00 0.00 28.88 3.01
1408 2981 4.805719 GCAAAAGAACTTCAAAGACCAAGG 59.194 41.667 0.00 0.00 0.00 3.61
1458 3033 5.820926 TTTCAAAGTTAATCGTGCATTGC 57.179 34.783 0.46 0.46 0.00 3.56
1508 3091 6.879276 AATCATGTAATCAAGCTCCATCTG 57.121 37.500 0.00 0.00 0.00 2.90
1515 3098 5.441718 AATCAAGCTCCATCTGTTTCCTA 57.558 39.130 0.00 0.00 0.00 2.94
1526 3109 8.466617 TCCATCTGTTTCCTAACTAGTCTATC 57.533 38.462 0.00 0.00 35.24 2.08
1537 3120 9.562408 TCCTAACTAGTCTATCAGAACATAGTG 57.438 37.037 0.00 0.00 0.00 2.74
1572 3155 6.448053 TCTATATCGTATTTTTCGCTGCAC 57.552 37.500 0.00 0.00 0.00 4.57
1579 3162 4.494690 CGTATTTTTCGCTGCACTCATCAT 60.495 41.667 0.00 0.00 0.00 2.45
1583 3166 1.812235 TCGCTGCACTCATCATTGTT 58.188 45.000 0.00 0.00 0.00 2.83
1634 3217 9.866655 ATACTTCATACCAACATGTTTCCATAT 57.133 29.630 8.77 1.94 0.00 1.78
1701 3285 5.504853 GGAGGAAAGATCTCAAGAACCATT 58.495 41.667 0.00 0.00 33.18 3.16
1751 3335 5.592282 TGTATGTCTTTGAAGTTTCCAAGCA 59.408 36.000 1.86 4.11 31.91 3.91
1911 3495 1.062488 AGGTGTTCTTCTGCCCTGGT 61.062 55.000 0.00 0.00 0.00 4.00
1996 3580 3.002656 CCGTGATTATGCCACAAGATCAC 59.997 47.826 12.79 12.79 41.80 3.06
2021 3605 3.560826 GCAAAAGGTTTGCTACGCA 57.439 47.368 16.46 0.00 41.87 5.24
2041 3625 2.040412 CAAGGAAGGGGTAACTCAAGCT 59.960 50.000 0.00 0.00 42.85 3.74
2055 3639 4.688021 ACTCAAGCTATCCTAGAAAAGCG 58.312 43.478 0.00 0.00 39.94 4.68
2121 3706 3.505293 GCCTTTGATTCTCTTCTGCACTT 59.495 43.478 0.00 0.00 0.00 3.16
2124 3709 5.415077 CCTTTGATTCTCTTCTGCACTTGAT 59.585 40.000 0.00 0.00 0.00 2.57
2134 3719 4.341366 TCTGCACTTGATGTTCTCTCAA 57.659 40.909 0.00 0.00 0.00 3.02
2138 3723 6.936335 TCTGCACTTGATGTTCTCTCAATTAA 59.064 34.615 0.00 0.00 32.50 1.40
2140 3725 6.486320 TGCACTTGATGTTCTCTCAATTAACA 59.514 34.615 0.00 0.00 37.51 2.41
2148 3733 7.857734 TGTTCTCTCAATTAACAGTTCACAA 57.142 32.000 0.00 0.00 0.00 3.33
2194 3779 4.241590 TGCTGTCATTTTGACCATTGAC 57.758 40.909 5.27 0.00 46.40 3.18
2206 3791 8.628630 TTTTGACCATTGACATTATGTACAGA 57.371 30.769 0.33 0.00 0.00 3.41
2214 3799 8.607459 CATTGACATTATGTACAGAAGAAGACC 58.393 37.037 9.09 1.41 0.00 3.85
2231 3816 5.246429 AGAAGACCCTGAGAACGAAAATACT 59.754 40.000 0.00 0.00 0.00 2.12
2246 3831 8.644318 ACGAAAATACTGACACAATATACTCC 57.356 34.615 0.00 0.00 0.00 3.85
2249 3834 9.817809 GAAAATACTGACACAATATACTCCTCA 57.182 33.333 0.00 0.00 0.00 3.86
2253 3838 7.283625 ACTGACACAATATACTCCTCATCTC 57.716 40.000 0.00 0.00 0.00 2.75
2260 3845 8.373981 CACAATATACTCCTCATCTCAGGATTT 58.626 37.037 0.00 0.00 42.02 2.17
2273 3858 9.434275 TCATCTCAGGATTTAGGTTACATTCTA 57.566 33.333 0.00 0.00 0.00 2.10
2319 3905 6.734137 ACTTTCTGAATTATGCGTTCACAAA 58.266 32.000 0.00 0.00 32.55 2.83
2320 3906 7.370383 ACTTTCTGAATTATGCGTTCACAAAT 58.630 30.769 0.00 0.00 32.55 2.32
2321 3907 8.511321 ACTTTCTGAATTATGCGTTCACAAATA 58.489 29.630 0.00 0.00 32.55 1.40
2322 3908 8.667987 TTTCTGAATTATGCGTTCACAAATAC 57.332 30.769 0.00 0.00 32.55 1.89
2323 3909 6.474364 TCTGAATTATGCGTTCACAAATACG 58.526 36.000 0.00 0.00 40.55 3.06
2324 3910 5.564768 TGAATTATGCGTTCACAAATACGG 58.435 37.500 0.00 0.00 38.17 4.02
2347 3933 9.692749 ACGGCTTATATTATATCATATTGGTCG 57.307 33.333 11.04 11.04 0.00 4.79
2361 3947 0.820074 TGGTCGCCGTTTTCACCATT 60.820 50.000 0.00 0.00 33.83 3.16
2362 3948 1.158434 GGTCGCCGTTTTCACCATTA 58.842 50.000 0.00 0.00 0.00 1.90
2373 3959 8.349983 GCCGTTTTCACCATTAAGATTATGTAT 58.650 33.333 0.00 0.00 0.00 2.29
2438 4024 3.713764 CTCATCTGGGGATTCAGGTTACT 59.286 47.826 0.00 0.00 35.58 2.24
2543 4130 4.257267 TCACTGTTGACATCTGTACAGG 57.743 45.455 22.48 10.11 41.69 4.00
2704 4291 1.280133 TCCAGGATGTTGGAGCTGAAG 59.720 52.381 0.00 0.00 42.24 3.02
2781 4411 7.715249 TCTGCTCTTGTATGTTTTACTGTTCTT 59.285 33.333 0.00 0.00 0.00 2.52
2906 4596 7.900782 ATTGATTGCATGAAGAAAAAGGAAG 57.099 32.000 0.00 0.00 0.00 3.46
3017 4731 1.281867 TCTAGCCAGGGAACATTGTGG 59.718 52.381 0.00 0.00 0.00 4.17
3059 4774 2.949714 AATGCAGTTGTCGAAGTTCG 57.050 45.000 19.23 19.23 42.10 3.95
3060 4775 1.148310 ATGCAGTTGTCGAAGTTCGG 58.852 50.000 24.18 8.82 40.88 4.30
3065 4780 2.729882 CAGTTGTCGAAGTTCGGTAAGG 59.270 50.000 24.18 11.03 40.88 2.69
3085 4800 9.392259 GGTAAGGTAGCAGTTTAAGTTATCATT 57.608 33.333 0.00 0.00 0.00 2.57
3092 4807 8.507524 AGCAGTTTAAGTTATCATTTAGTCCC 57.492 34.615 0.00 0.00 0.00 4.46
3093 4808 8.329502 AGCAGTTTAAGTTATCATTTAGTCCCT 58.670 33.333 0.00 0.00 0.00 4.20
3094 4809 8.613482 GCAGTTTAAGTTATCATTTAGTCCCTC 58.387 37.037 0.00 0.00 0.00 4.30
3095 4810 9.110502 CAGTTTAAGTTATCATTTAGTCCCTCC 57.889 37.037 0.00 0.00 0.00 4.30
3096 4811 8.832735 AGTTTAAGTTATCATTTAGTCCCTCCA 58.167 33.333 0.00 0.00 0.00 3.86
3097 4812 9.457436 GTTTAAGTTATCATTTAGTCCCTCCAA 57.543 33.333 0.00 0.00 0.00 3.53
3101 4816 8.568617 AGTTATCATTTAGTCCCTCCAATACT 57.431 34.615 0.00 0.00 0.00 2.12
3102 4817 9.670442 AGTTATCATTTAGTCCCTCCAATACTA 57.330 33.333 0.00 0.00 0.00 1.82
3107 4822 8.998814 TCATTTAGTCCCTCCAATACTAAATCA 58.001 33.333 13.85 2.69 46.11 2.57
3108 4823 9.277783 CATTTAGTCCCTCCAATACTAAATCAG 57.722 37.037 13.85 4.39 46.11 2.90
3109 4824 5.297569 AGTCCCTCCAATACTAAATCAGC 57.702 43.478 0.00 0.00 0.00 4.26
3110 4825 4.058817 GTCCCTCCAATACTAAATCAGCG 58.941 47.826 0.00 0.00 0.00 5.18
3111 4826 3.964688 TCCCTCCAATACTAAATCAGCGA 59.035 43.478 0.00 0.00 0.00 4.93
3112 4827 4.058817 CCCTCCAATACTAAATCAGCGAC 58.941 47.826 0.00 0.00 0.00 5.19
3113 4828 4.442893 CCCTCCAATACTAAATCAGCGACA 60.443 45.833 0.00 0.00 0.00 4.35
3114 4829 5.116180 CCTCCAATACTAAATCAGCGACAA 58.884 41.667 0.00 0.00 0.00 3.18
3115 4830 5.760253 CCTCCAATACTAAATCAGCGACAAT 59.240 40.000 0.00 0.00 0.00 2.71
3116 4831 6.260936 CCTCCAATACTAAATCAGCGACAATT 59.739 38.462 0.00 0.00 0.00 2.32
3117 4832 7.441157 CCTCCAATACTAAATCAGCGACAATTA 59.559 37.037 0.00 0.00 0.00 1.40
3118 4833 8.725405 TCCAATACTAAATCAGCGACAATTAA 57.275 30.769 0.00 0.00 0.00 1.40
3119 4834 9.337396 TCCAATACTAAATCAGCGACAATTAAT 57.663 29.630 0.00 0.00 0.00 1.40
3124 4839 8.902540 ACTAAATCAGCGACAATTAATATGGA 57.097 30.769 0.00 0.00 0.00 3.41
3125 4840 9.507329 ACTAAATCAGCGACAATTAATATGGAT 57.493 29.630 0.00 0.00 0.00 3.41
3126 4841 9.979270 CTAAATCAGCGACAATTAATATGGATC 57.021 33.333 0.00 0.00 0.00 3.36
3127 4842 7.984422 AATCAGCGACAATTAATATGGATCA 57.016 32.000 0.00 0.00 0.00 2.92
3128 4843 7.606858 ATCAGCGACAATTAATATGGATCAG 57.393 36.000 0.00 0.00 0.00 2.90
3129 4844 6.758254 TCAGCGACAATTAATATGGATCAGA 58.242 36.000 0.00 0.00 0.00 3.27
3130 4845 6.870439 TCAGCGACAATTAATATGGATCAGAG 59.130 38.462 0.00 0.00 0.00 3.35
3131 4846 6.091849 CAGCGACAATTAATATGGATCAGAGG 59.908 42.308 0.00 0.00 0.00 3.69
3132 4847 5.352569 GCGACAATTAATATGGATCAGAGGG 59.647 44.000 0.00 0.00 0.00 4.30
3133 4848 6.701340 CGACAATTAATATGGATCAGAGGGA 58.299 40.000 0.00 0.00 0.00 4.20
3139 4854 8.742125 ATTAATATGGATCAGAGGGAGTACAA 57.258 34.615 0.00 0.00 0.00 2.41
3144 4859 5.338632 TGGATCAGAGGGAGTACAAGTAAA 58.661 41.667 0.00 0.00 0.00 2.01
3202 4920 9.630098 AATTTGTTAGAACTAGCATCACATTTG 57.370 29.630 0.00 0.00 0.00 2.32
3205 4923 8.840833 TGTTAGAACTAGCATCACATTTGTTA 57.159 30.769 0.00 0.00 0.00 2.41
3243 4965 7.717568 TCTAGGATATGCAGTCAACTTACTTC 58.282 38.462 0.00 0.00 0.00 3.01
3325 5048 6.151312 TGGAGTTACTCTCTGTATGAACTGAC 59.849 42.308 12.41 0.00 42.40 3.51
3328 5051 4.054359 ACTCTCTGTATGAACTGACCCT 57.946 45.455 0.00 0.00 31.14 4.34
3364 5092 3.766051 TGATCTGTCACTGATACTGTGCT 59.234 43.478 0.00 0.00 34.16 4.40
3418 5146 3.815401 CAGTTGAACACTTCCCACCTAAG 59.185 47.826 0.00 0.00 30.92 2.18
3432 5160 4.263068 CCCACCTAAGAGTCAAACTGTGAT 60.263 45.833 0.00 0.00 38.90 3.06
3499 5227 6.703319 TCACATTAGGAAAGATAAACACGGA 58.297 36.000 0.00 0.00 0.00 4.69
3594 5325 5.598005 TCTTTGAAAGAATGAAGAAGGGCAA 59.402 36.000 4.94 0.00 33.83 4.52
3635 5366 5.006455 TCACTTAGAGTACATCTACTTCGCG 59.994 44.000 0.00 0.00 40.33 5.87
3646 5377 4.301637 TCTACTTCGCGAATCAATGCTA 57.698 40.909 23.67 0.00 0.00 3.49
3653 5384 2.287644 CGCGAATCAATGCTACATTCCA 59.712 45.455 0.00 0.00 0.00 3.53
3744 7381 3.063997 CCTAAAAGAGCACGCATAACTGG 59.936 47.826 0.00 0.00 0.00 4.00
4020 7657 0.325933 CTGCATGTCTGACCAGGGAA 59.674 55.000 5.17 0.00 0.00 3.97
4080 7717 2.948979 GTCCGATGTTCCCATTTATGCA 59.051 45.455 0.00 0.00 0.00 3.96
4183 7820 0.108520 GCTGCCAATGGGATGTGTTG 60.109 55.000 0.00 0.00 35.59 3.33
4532 8181 7.227910 TGAGAAGCGTTAGTTTTAACTTTCCAT 59.772 33.333 0.00 0.00 40.37 3.41
4542 8191 8.463930 AGTTTTAACTTTCCATCACATGAGAA 57.536 30.769 0.00 0.00 35.21 2.87
4789 8438 6.381498 TCCCCTGTGTTTCTATCAAACATA 57.619 37.500 3.38 0.56 41.51 2.29
4791 8440 6.884295 TCCCCTGTGTTTCTATCAAACATAAG 59.116 38.462 3.38 5.03 41.51 1.73
4891 8540 4.982241 AGGTCTGAAGGATGAAGTGAAA 57.018 40.909 0.00 0.00 0.00 2.69
5108 8757 7.710907 TGTATCTTGAATTCTCTCCGGTTATTG 59.289 37.037 7.05 0.00 0.00 1.90
5258 8907 7.875554 ACATATACTGTTGTATTGTGACACACA 59.124 33.333 8.05 0.00 39.70 3.72
5465 9115 2.068834 TTTTGCGGGGAGGTAAAACA 57.931 45.000 0.00 0.00 0.00 2.83
5466 9116 2.296073 TTTGCGGGGAGGTAAAACAT 57.704 45.000 0.00 0.00 0.00 2.71
5467 9117 2.296073 TTGCGGGGAGGTAAAACATT 57.704 45.000 0.00 0.00 0.00 2.71
5468 9118 3.436577 TTGCGGGGAGGTAAAACATTA 57.563 42.857 0.00 0.00 0.00 1.90
5469 9119 2.713877 TGCGGGGAGGTAAAACATTAC 58.286 47.619 0.00 0.00 0.00 1.89
5470 9120 2.306512 TGCGGGGAGGTAAAACATTACT 59.693 45.455 0.00 0.00 0.00 2.24
5471 9121 3.244981 TGCGGGGAGGTAAAACATTACTT 60.245 43.478 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
1 2 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
2 3 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
3 4 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
4 5 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
5 6 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
6 7 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
7 8 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
14 15 4.976731 CCGTCTAGGTGAATAAGTCATTCG 59.023 45.833 0.00 0.00 45.25 3.34
15 16 6.145338 TCCGTCTAGGTGAATAAGTCATTC 57.855 41.667 0.00 0.00 40.27 2.67
16 17 5.069251 CCTCCGTCTAGGTGAATAAGTCATT 59.931 44.000 0.00 0.00 38.90 2.57
17 18 4.585162 CCTCCGTCTAGGTGAATAAGTCAT 59.415 45.833 0.00 0.00 38.90 3.06
18 19 3.952323 CCTCCGTCTAGGTGAATAAGTCA 59.048 47.826 0.00 0.00 41.99 3.41
19 20 4.571372 CCTCCGTCTAGGTGAATAAGTC 57.429 50.000 0.00 0.00 41.99 3.01
29 30 4.384940 GGTAACTACTACCTCCGTCTAGG 58.615 52.174 0.00 0.00 46.05 3.02
40 41 4.220163 AGAGGTGCTTGTGGTAACTACTAC 59.780 45.833 0.00 0.00 38.06 2.73
41 42 4.413760 AGAGGTGCTTGTGGTAACTACTA 58.586 43.478 0.00 0.00 37.61 1.82
42 43 3.240302 AGAGGTGCTTGTGGTAACTACT 58.760 45.455 0.00 0.00 37.61 2.57
43 44 3.258622 AGAGAGGTGCTTGTGGTAACTAC 59.741 47.826 0.00 0.00 37.61 2.73
44 45 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
45 46 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
46 47 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
47 48 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
48 49 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
49 50 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
50 51 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
51 52 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
52 53 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
53 54 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
54 55 6.758886 CGTATTTAATGAAGAGAGAGGTGCTT 59.241 38.462 0.00 0.00 0.00 3.91
55 56 6.127310 ACGTATTTAATGAAGAGAGAGGTGCT 60.127 38.462 0.00 0.00 0.00 4.40
56 57 6.019479 CACGTATTTAATGAAGAGAGAGGTGC 60.019 42.308 0.00 0.00 0.00 5.01
57 58 6.019479 GCACGTATTTAATGAAGAGAGAGGTG 60.019 42.308 0.00 0.00 0.00 4.00
58 59 6.043411 GCACGTATTTAATGAAGAGAGAGGT 58.957 40.000 0.00 0.00 0.00 3.85
59 60 5.463724 GGCACGTATTTAATGAAGAGAGAGG 59.536 44.000 0.00 0.00 0.00 3.69
60 61 6.019479 GTGGCACGTATTTAATGAAGAGAGAG 60.019 42.308 0.00 0.00 0.00 3.20
61 62 5.810587 GTGGCACGTATTTAATGAAGAGAGA 59.189 40.000 0.00 0.00 0.00 3.10
62 63 5.580691 TGTGGCACGTATTTAATGAAGAGAG 59.419 40.000 13.77 0.00 0.00 3.20
63 64 5.483811 TGTGGCACGTATTTAATGAAGAGA 58.516 37.500 13.77 0.00 0.00 3.10
64 65 5.794687 TGTGGCACGTATTTAATGAAGAG 57.205 39.130 13.77 0.00 0.00 2.85
65 66 7.466725 GCTTATGTGGCACGTATTTAATGAAGA 60.467 37.037 19.55 0.94 0.00 2.87
66 67 6.632834 GCTTATGTGGCACGTATTTAATGAAG 59.367 38.462 19.55 13.80 0.00 3.02
67 68 6.094186 TGCTTATGTGGCACGTATTTAATGAA 59.906 34.615 19.55 4.06 34.56 2.57
68 69 5.586643 TGCTTATGTGGCACGTATTTAATGA 59.413 36.000 19.55 3.01 34.56 2.57
69 70 5.815850 TGCTTATGTGGCACGTATTTAATG 58.184 37.500 19.55 4.53 34.56 1.90
70 71 6.443934 TTGCTTATGTGGCACGTATTTAAT 57.556 33.333 19.55 5.08 39.55 1.40
71 72 5.881777 TTGCTTATGTGGCACGTATTTAA 57.118 34.783 19.55 11.84 39.55 1.52
72 73 5.413213 ACTTTGCTTATGTGGCACGTATTTA 59.587 36.000 19.55 5.10 39.55 1.40
73 74 4.217550 ACTTTGCTTATGTGGCACGTATTT 59.782 37.500 19.55 1.66 39.55 1.40
74 75 3.756434 ACTTTGCTTATGTGGCACGTATT 59.244 39.130 19.55 4.10 39.55 1.89
75 76 3.343617 ACTTTGCTTATGTGGCACGTAT 58.656 40.909 19.55 7.98 39.55 3.06
76 77 2.773487 ACTTTGCTTATGTGGCACGTA 58.227 42.857 15.38 15.38 39.55 3.57
77 78 1.604604 ACTTTGCTTATGTGGCACGT 58.395 45.000 17.65 17.65 39.55 4.49
78 79 2.287547 ACAACTTTGCTTATGTGGCACG 60.288 45.455 13.77 0.00 39.55 5.34
79 80 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
80 81 5.468592 CAATACAACTTTGCTTATGTGGCA 58.531 37.500 0.00 0.00 37.97 4.92
81 82 4.864247 CCAATACAACTTTGCTTATGTGGC 59.136 41.667 0.00 0.00 0.00 5.01
82 83 6.071952 ACTCCAATACAACTTTGCTTATGTGG 60.072 38.462 0.00 0.00 0.00 4.17
83 84 6.913170 ACTCCAATACAACTTTGCTTATGTG 58.087 36.000 0.00 0.00 0.00 3.21
84 85 8.677300 CATACTCCAATACAACTTTGCTTATGT 58.323 33.333 0.00 0.00 0.00 2.29
85 86 8.677300 ACATACTCCAATACAACTTTGCTTATG 58.323 33.333 0.00 0.00 0.00 1.90
86 87 8.677300 CACATACTCCAATACAACTTTGCTTAT 58.323 33.333 0.00 0.00 0.00 1.73
87 88 7.880713 TCACATACTCCAATACAACTTTGCTTA 59.119 33.333 0.00 0.00 0.00 3.09
88 89 6.714810 TCACATACTCCAATACAACTTTGCTT 59.285 34.615 0.00 0.00 0.00 3.91
89 90 6.237901 TCACATACTCCAATACAACTTTGCT 58.762 36.000 0.00 0.00 0.00 3.91
90 91 6.494893 TCACATACTCCAATACAACTTTGC 57.505 37.500 0.00 0.00 0.00 3.68
91 92 8.044060 ACATCACATACTCCAATACAACTTTG 57.956 34.615 0.00 0.00 0.00 2.77
92 93 8.635765 AACATCACATACTCCAATACAACTTT 57.364 30.769 0.00 0.00 0.00 2.66
93 94 9.162764 GTAACATCACATACTCCAATACAACTT 57.837 33.333 0.00 0.00 0.00 2.66
94 95 8.540388 AGTAACATCACATACTCCAATACAACT 58.460 33.333 0.00 0.00 0.00 3.16
95 96 8.718102 AGTAACATCACATACTCCAATACAAC 57.282 34.615 0.00 0.00 0.00 3.32
96 97 8.942338 GAGTAACATCACATACTCCAATACAA 57.058 34.615 2.30 0.00 41.29 2.41
104 105 7.921745 GGAACTTAGGAGTAACATCACATACTC 59.078 40.741 4.72 4.72 44.66 2.59
105 106 7.620094 AGGAACTTAGGAGTAACATCACATACT 59.380 37.037 0.00 0.00 34.21 2.12
106 107 7.783042 AGGAACTTAGGAGTAACATCACATAC 58.217 38.462 0.00 0.00 34.21 2.39
107 108 7.069578 GGAGGAACTTAGGAGTAACATCACATA 59.930 40.741 0.00 0.00 41.55 2.29
108 109 6.127026 GGAGGAACTTAGGAGTAACATCACAT 60.127 42.308 0.00 0.00 41.55 3.21
109 110 5.187186 GGAGGAACTTAGGAGTAACATCACA 59.813 44.000 0.00 0.00 41.55 3.58
110 111 5.395435 GGGAGGAACTTAGGAGTAACATCAC 60.395 48.000 0.00 0.00 41.55 3.06
111 112 4.715297 GGGAGGAACTTAGGAGTAACATCA 59.285 45.833 0.00 0.00 41.55 3.07
112 113 4.101274 GGGGAGGAACTTAGGAGTAACATC 59.899 50.000 0.00 0.00 41.55 3.06
113 114 4.038633 GGGGAGGAACTTAGGAGTAACAT 58.961 47.826 0.00 0.00 41.55 2.71
114 115 3.181404 TGGGGAGGAACTTAGGAGTAACA 60.181 47.826 0.00 0.00 41.55 2.41
115 116 3.197333 GTGGGGAGGAACTTAGGAGTAAC 59.803 52.174 0.00 0.00 41.55 2.50
116 117 3.078612 AGTGGGGAGGAACTTAGGAGTAA 59.921 47.826 0.00 0.00 41.55 2.24
117 118 2.658489 AGTGGGGAGGAACTTAGGAGTA 59.342 50.000 0.00 0.00 41.55 2.59
118 119 1.437547 AGTGGGGAGGAACTTAGGAGT 59.562 52.381 0.00 0.00 41.55 3.85
119 120 1.834263 CAGTGGGGAGGAACTTAGGAG 59.166 57.143 0.00 0.00 41.55 3.69
120 121 1.151413 ACAGTGGGGAGGAACTTAGGA 59.849 52.381 0.00 0.00 41.55 2.94
121 122 1.279271 CACAGTGGGGAGGAACTTAGG 59.721 57.143 0.00 0.00 41.55 2.69
122 123 2.028020 GTCACAGTGGGGAGGAACTTAG 60.028 54.545 0.00 0.00 41.55 2.18
123 124 1.975680 GTCACAGTGGGGAGGAACTTA 59.024 52.381 0.00 0.00 41.55 2.24
124 125 0.765510 GTCACAGTGGGGAGGAACTT 59.234 55.000 0.00 0.00 41.55 2.66
126 127 1.375326 GGTCACAGTGGGGAGGAAC 59.625 63.158 0.00 0.00 0.00 3.62
127 128 1.074090 TGGTCACAGTGGGGAGGAA 60.074 57.895 0.00 0.00 0.00 3.36
128 129 1.536418 CTGGTCACAGTGGGGAGGA 60.536 63.158 0.00 0.00 39.92 3.71
129 130 3.072476 CTGGTCACAGTGGGGAGG 58.928 66.667 0.00 0.00 39.92 4.30
130 131 2.348998 GCTGGTCACAGTGGGGAG 59.651 66.667 0.00 0.00 46.62 4.30
131 132 3.249189 GGCTGGTCACAGTGGGGA 61.249 66.667 0.00 0.00 46.62 4.81
132 133 3.252284 AGGCTGGTCACAGTGGGG 61.252 66.667 0.00 0.00 46.62 4.96
133 134 2.055689 TTGAGGCTGGTCACAGTGGG 62.056 60.000 0.00 0.00 46.62 4.61
134 135 0.886490 GTTGAGGCTGGTCACAGTGG 60.886 60.000 0.00 0.00 46.62 4.00
135 136 0.179048 TGTTGAGGCTGGTCACAGTG 60.179 55.000 0.00 0.00 46.62 3.66
136 137 0.767375 ATGTTGAGGCTGGTCACAGT 59.233 50.000 0.00 0.00 46.62 3.55
138 139 0.764271 TCATGTTGAGGCTGGTCACA 59.236 50.000 0.00 0.00 0.00 3.58
139 140 1.160137 GTCATGTTGAGGCTGGTCAC 58.840 55.000 0.00 0.00 0.00 3.67
140 141 1.002430 GAGTCATGTTGAGGCTGGTCA 59.998 52.381 0.00 0.00 0.00 4.02
141 142 1.277557 AGAGTCATGTTGAGGCTGGTC 59.722 52.381 0.00 0.00 0.00 4.02
142 143 1.002888 CAGAGTCATGTTGAGGCTGGT 59.997 52.381 0.00 0.00 29.93 4.00
143 144 1.735386 CAGAGTCATGTTGAGGCTGG 58.265 55.000 0.00 0.00 29.93 4.85
144 145 1.085091 GCAGAGTCATGTTGAGGCTG 58.915 55.000 0.00 0.00 34.04 4.85
145 146 0.689055 TGCAGAGTCATGTTGAGGCT 59.311 50.000 0.00 0.00 0.00 4.58
146 147 1.085091 CTGCAGAGTCATGTTGAGGC 58.915 55.000 8.42 0.00 0.00 4.70
147 148 1.678123 CCCTGCAGAGTCATGTTGAGG 60.678 57.143 17.39 0.00 0.00 3.86
151 152 1.209019 CTAGCCCTGCAGAGTCATGTT 59.791 52.381 17.39 0.00 0.00 2.71
166 167 5.569428 GCTCTACTACTCCTAGTACCTAGCC 60.569 52.000 0.00 0.00 34.79 3.93
174 182 5.358725 GCAAAAGAGCTCTACTACTCCTAGT 59.641 44.000 18.59 0.00 37.04 2.57
175 183 5.592688 AGCAAAAGAGCTCTACTACTCCTAG 59.407 44.000 18.59 0.00 42.18 3.02
176 184 5.511363 AGCAAAAGAGCTCTACTACTCCTA 58.489 41.667 18.59 0.00 42.18 2.94
179 187 5.961272 AGAAGCAAAAGAGCTCTACTACTC 58.039 41.667 18.59 9.78 45.89 2.59
180 188 5.993748 AGAAGCAAAAGAGCTCTACTACT 57.006 39.130 18.59 9.95 45.89 2.57
181 189 5.350091 CCAAGAAGCAAAAGAGCTCTACTAC 59.650 44.000 18.59 7.64 45.89 2.73
182 190 5.246203 TCCAAGAAGCAAAAGAGCTCTACTA 59.754 40.000 18.59 0.00 45.89 1.82
183 191 4.040952 TCCAAGAAGCAAAAGAGCTCTACT 59.959 41.667 18.59 9.58 45.89 2.57
184 192 4.319177 TCCAAGAAGCAAAAGAGCTCTAC 58.681 43.478 18.59 7.26 45.89 2.59
185 193 4.623932 TCCAAGAAGCAAAAGAGCTCTA 57.376 40.909 18.59 0.00 45.89 2.43
186 194 3.498774 TCCAAGAAGCAAAAGAGCTCT 57.501 42.857 11.45 11.45 45.89 4.09
187 195 3.505293 ACATCCAAGAAGCAAAAGAGCTC 59.495 43.478 5.27 5.27 45.89 4.09
207 215 1.108727 CCAACTGCCAGCCTTCAACA 61.109 55.000 0.00 0.00 0.00 3.33
241 249 0.823356 GAGCCCAAGCCAACAGTCAA 60.823 55.000 0.00 0.00 41.25 3.18
262 270 1.529826 GCTGCACGCGGAGAATAAAAG 60.530 52.381 12.47 0.00 30.74 2.27
312 1182 1.470098 GGCGTTCTAGTCACTCCGTTA 59.530 52.381 0.00 0.00 0.00 3.18
410 1285 4.619679 AGAAGGGCAGAGAAATAGAGACT 58.380 43.478 0.00 0.00 0.00 3.24
411 1286 5.105146 TGAAGAAGGGCAGAGAAATAGAGAC 60.105 44.000 0.00 0.00 0.00 3.36
413 1288 5.350504 TGAAGAAGGGCAGAGAAATAGAG 57.649 43.478 0.00 0.00 0.00 2.43
414 1289 5.485353 TCTTGAAGAAGGGCAGAGAAATAGA 59.515 40.000 0.00 0.00 0.00 1.98
415 1290 5.738909 TCTTGAAGAAGGGCAGAGAAATAG 58.261 41.667 0.00 0.00 0.00 1.73
416 1291 5.762179 TCTTGAAGAAGGGCAGAGAAATA 57.238 39.130 0.00 0.00 0.00 1.40
417 1292 4.647564 TCTTGAAGAAGGGCAGAGAAAT 57.352 40.909 0.00 0.00 0.00 2.17
418 1293 4.647564 ATCTTGAAGAAGGGCAGAGAAA 57.352 40.909 0.00 0.00 0.00 2.52
419 1294 4.202503 ACAATCTTGAAGAAGGGCAGAGAA 60.203 41.667 0.00 0.00 0.00 2.87
420 1295 3.328931 ACAATCTTGAAGAAGGGCAGAGA 59.671 43.478 0.00 0.00 0.00 3.10
421 1296 3.683802 ACAATCTTGAAGAAGGGCAGAG 58.316 45.455 0.00 0.00 0.00 3.35
422 1297 3.795688 ACAATCTTGAAGAAGGGCAGA 57.204 42.857 0.00 0.00 0.00 4.26
423 1298 3.822735 TGAACAATCTTGAAGAAGGGCAG 59.177 43.478 0.00 0.00 0.00 4.85
424 1299 3.831323 TGAACAATCTTGAAGAAGGGCA 58.169 40.909 0.00 0.00 0.00 5.36
425 1300 4.704057 AGATGAACAATCTTGAAGAAGGGC 59.296 41.667 0.00 0.00 43.52 5.19
426 1301 6.093771 CAGAGATGAACAATCTTGAAGAAGGG 59.906 42.308 0.00 0.00 46.12 3.95
427 1302 6.403418 GCAGAGATGAACAATCTTGAAGAAGG 60.403 42.308 0.00 0.00 46.12 3.46
506 1382 0.895530 AGTCATTCATGTCGGTCGGT 59.104 50.000 0.00 0.00 0.00 4.69
507 1383 2.460918 GTAGTCATTCATGTCGGTCGG 58.539 52.381 0.00 0.00 0.00 4.79
508 1384 2.159296 TGGTAGTCATTCATGTCGGTCG 60.159 50.000 0.00 0.00 0.00 4.79
509 1385 3.448686 CTGGTAGTCATTCATGTCGGTC 58.551 50.000 0.00 0.00 0.00 4.79
510 1386 2.418746 GCTGGTAGTCATTCATGTCGGT 60.419 50.000 0.00 0.00 0.00 4.69
511 1387 2.205074 GCTGGTAGTCATTCATGTCGG 58.795 52.381 0.00 0.00 0.00 4.79
515 1428 7.212976 ACTACTTATGCTGGTAGTCATTCATG 58.787 38.462 0.00 0.00 43.20 3.07
524 1437 5.533154 AGCTACTGACTACTTATGCTGGTAG 59.467 44.000 0.00 0.00 40.62 3.18
539 1452 3.187432 GCTCAAACCTCAAAGCTACTGAC 59.813 47.826 0.00 0.00 0.00 3.51
733 1663 5.977129 ACCGAACAAATCAAAGCAAGTAAAG 59.023 36.000 0.00 0.00 0.00 1.85
769 1699 4.485875 TCAGGTGGGAAGTAGAAACACTA 58.514 43.478 0.00 0.00 32.88 2.74
770 1700 3.314693 TCAGGTGGGAAGTAGAAACACT 58.685 45.455 0.00 0.00 32.88 3.55
771 1701 3.665190 CTCAGGTGGGAAGTAGAAACAC 58.335 50.000 0.00 0.00 0.00 3.32
783 1713 2.673523 CAAGGAGGCTCAGGTGGG 59.326 66.667 17.69 0.00 0.00 4.61
785 1715 1.376942 CAGCAAGGAGGCTCAGGTG 60.377 63.158 17.69 16.19 43.68 4.00
786 1716 3.076092 CAGCAAGGAGGCTCAGGT 58.924 61.111 17.69 8.23 43.68 4.00
787 1717 2.438075 GCAGCAAGGAGGCTCAGG 60.438 66.667 17.69 5.89 43.68 3.86
789 1719 1.771783 TTCTGCAGCAAGGAGGCTCA 61.772 55.000 17.69 0.00 43.68 4.26
790 1720 0.607489 TTTCTGCAGCAAGGAGGCTC 60.607 55.000 9.47 5.78 43.68 4.70
792 1722 1.174712 TGTTTCTGCAGCAAGGAGGC 61.175 55.000 9.47 0.00 36.17 4.70
793 1723 1.542492 ATGTTTCTGCAGCAAGGAGG 58.458 50.000 9.47 0.00 36.17 4.30
813 1757 0.602905 GCCAGTTGCCACTCTACGTT 60.603 55.000 0.00 0.00 0.00 3.99
814 1758 1.004918 GCCAGTTGCCACTCTACGT 60.005 57.895 0.00 0.00 0.00 3.57
815 1759 1.005037 TGCCAGTTGCCACTCTACG 60.005 57.895 0.00 0.00 40.16 3.51
818 1762 0.035630 GATCTGCCAGTTGCCACTCT 60.036 55.000 0.00 0.00 40.16 3.24
819 1763 0.035630 AGATCTGCCAGTTGCCACTC 60.036 55.000 0.00 0.00 40.16 3.51
821 1765 0.807496 GAAGATCTGCCAGTTGCCAC 59.193 55.000 0.00 0.00 40.16 5.01
822 1766 0.694771 AGAAGATCTGCCAGTTGCCA 59.305 50.000 0.00 0.00 40.16 4.92
823 1767 1.093159 CAGAAGATCTGCCAGTTGCC 58.907 55.000 0.00 0.00 37.72 4.52
835 1792 6.166982 GGAAAGTGTAAGTAGCACAGAAGAT 58.833 40.000 0.00 0.00 39.17 2.40
844 1801 8.391106 CACATTCTATTGGAAAGTGTAAGTAGC 58.609 37.037 9.24 0.00 44.05 3.58
854 1811 6.314896 GTCTCTCCACACATTCTATTGGAAAG 59.685 42.308 0.00 0.00 37.69 2.62
858 1815 5.089970 TGTCTCTCCACACATTCTATTGG 57.910 43.478 0.00 0.00 0.00 3.16
859 1816 7.765819 TGTTATGTCTCTCCACACATTCTATTG 59.234 37.037 0.00 0.00 34.92 1.90
860 1817 7.766278 GTGTTATGTCTCTCCACACATTCTATT 59.234 37.037 0.00 0.00 38.11 1.73
862 1819 6.210584 TGTGTTATGTCTCTCCACACATTCTA 59.789 38.462 0.00 0.00 42.12 2.10
863 1820 5.012046 TGTGTTATGTCTCTCCACACATTCT 59.988 40.000 0.00 0.00 42.12 2.40
864 1821 5.237815 TGTGTTATGTCTCTCCACACATTC 58.762 41.667 0.00 0.00 42.12 2.67
865 1822 5.227569 TGTGTTATGTCTCTCCACACATT 57.772 39.130 0.00 0.00 42.12 2.71
866 1823 4.890158 TGTGTTATGTCTCTCCACACAT 57.110 40.909 0.00 0.00 42.12 3.21
871 1881 5.545063 TGTTCTTGTGTTATGTCTCTCCA 57.455 39.130 0.00 0.00 0.00 3.86
872 1882 6.223852 TCTTGTTCTTGTGTTATGTCTCTCC 58.776 40.000 0.00 0.00 0.00 3.71
876 1886 9.561069 AGTAAATCTTGTTCTTGTGTTATGTCT 57.439 29.630 0.00 0.00 0.00 3.41
904 1914 7.511028 AGGGTAATTTCTTCCTCCTAGTATGAG 59.489 40.741 0.00 0.00 0.00 2.90
905 1915 7.371043 AGGGTAATTTCTTCCTCCTAGTATGA 58.629 38.462 0.00 0.00 0.00 2.15
906 1916 7.619512 AGGGTAATTTCTTCCTCCTAGTATG 57.380 40.000 0.00 0.00 0.00 2.39
907 1917 7.628101 ACAAGGGTAATTTCTTCCTCCTAGTAT 59.372 37.037 0.00 0.00 0.00 2.12
908 1918 6.964086 ACAAGGGTAATTTCTTCCTCCTAGTA 59.036 38.462 0.00 0.00 0.00 1.82
909 1919 5.791141 ACAAGGGTAATTTCTTCCTCCTAGT 59.209 40.000 0.00 0.00 0.00 2.57
918 1928 4.039124 CCACAAGCACAAGGGTAATTTCTT 59.961 41.667 0.00 0.00 0.00 2.52
930 1940 1.946768 GTCAGCTAACCACAAGCACAA 59.053 47.619 0.00 0.00 42.62 3.33
931 1941 1.134250 TGTCAGCTAACCACAAGCACA 60.134 47.619 0.00 0.00 42.62 4.57
935 1945 5.877012 ACAGATAATGTCAGCTAACCACAAG 59.123 40.000 0.00 0.00 37.75 3.16
936 1946 5.804639 ACAGATAATGTCAGCTAACCACAA 58.195 37.500 0.00 0.00 37.75 3.33
937 1947 5.420725 ACAGATAATGTCAGCTAACCACA 57.579 39.130 0.00 0.00 37.75 4.17
938 1948 7.843490 TTTACAGATAATGTCAGCTAACCAC 57.157 36.000 0.00 0.00 42.70 4.16
943 1953 9.461312 ACCAAAATTTACAGATAATGTCAGCTA 57.539 29.630 0.00 0.00 42.70 3.32
944 1954 8.353423 ACCAAAATTTACAGATAATGTCAGCT 57.647 30.769 0.00 0.00 42.70 4.24
945 1955 8.986477 AACCAAAATTTACAGATAATGTCAGC 57.014 30.769 0.00 0.00 42.70 4.26
955 2001 4.038642 GCCCTGTGAACCAAAATTTACAGA 59.961 41.667 15.09 0.64 44.75 3.41
959 2005 3.323403 CCAGCCCTGTGAACCAAAATTTA 59.677 43.478 0.00 0.00 0.00 1.40
966 2012 2.066340 CTACCAGCCCTGTGAACCA 58.934 57.895 0.00 0.00 0.00 3.67
967 2013 1.377333 GCTACCAGCCCTGTGAACC 60.377 63.158 0.00 0.00 34.48 3.62
982 2028 2.173356 CCATCTTGGTTCTGGGATGCTA 59.827 50.000 0.00 0.00 35.57 3.49
983 2029 1.064166 CCATCTTGGTTCTGGGATGCT 60.064 52.381 0.00 0.00 35.57 3.79
984 2030 1.064463 TCCATCTTGGTTCTGGGATGC 60.064 52.381 0.00 0.00 39.03 3.91
985 2031 2.507058 TCTCCATCTTGGTTCTGGGATG 59.493 50.000 0.00 0.00 39.03 3.51
986 2032 2.850833 TCTCCATCTTGGTTCTGGGAT 58.149 47.619 0.00 0.00 39.03 3.85
987 2033 2.342406 TCTCCATCTTGGTTCTGGGA 57.658 50.000 0.00 0.00 39.03 4.37
988 2034 3.084786 GTTTCTCCATCTTGGTTCTGGG 58.915 50.000 0.00 0.00 39.03 4.45
989 2035 4.026356 AGTTTCTCCATCTTGGTTCTGG 57.974 45.455 0.00 0.00 39.03 3.86
992 2038 5.299279 TCACAAAGTTTCTCCATCTTGGTTC 59.701 40.000 0.00 0.00 39.03 3.62
993 2039 5.067805 GTCACAAAGTTTCTCCATCTTGGTT 59.932 40.000 0.00 0.00 39.03 3.67
994 2040 4.580580 GTCACAAAGTTTCTCCATCTTGGT 59.419 41.667 0.00 0.00 39.03 3.67
996 2042 5.297776 ACAGTCACAAAGTTTCTCCATCTTG 59.702 40.000 0.00 0.00 0.00 3.02
997 2043 5.440610 ACAGTCACAAAGTTTCTCCATCTT 58.559 37.500 0.00 0.00 0.00 2.40
1148 2196 4.881273 ACTCTGCATGTTAACTGTGAACAA 59.119 37.500 14.43 0.00 40.07 2.83
1169 2572 7.450903 ACTATTCAGCACAAACCTAACTAACT 58.549 34.615 0.00 0.00 0.00 2.24
1229 2799 3.514309 AGTTCAACCAACTAGTAGGCGAT 59.486 43.478 0.00 0.00 44.13 4.58
1231 2801 3.314541 AGTTCAACCAACTAGTAGGCG 57.685 47.619 0.00 0.00 44.13 5.52
1283 2853 8.668353 GCAATGTGTTCAGAATCTATTCACTTA 58.332 33.333 5.55 0.00 39.23 2.24
1313 2883 9.478019 CATTAGTTTAACTACAGAATTTGCTCG 57.522 33.333 4.09 0.00 28.93 5.03
1321 2891 9.667107 CTGAATCCCATTAGTTTAACTACAGAA 57.333 33.333 4.09 0.00 28.93 3.02
1342 2912 5.063880 GGAATAATAACCGCTGGACTGAAT 58.936 41.667 1.50 0.00 0.00 2.57
1344 2914 3.709653 AGGAATAATAACCGCTGGACTGA 59.290 43.478 1.50 0.00 0.00 3.41
1354 2926 7.875327 TTTCAGCCTTACAGGAATAATAACC 57.125 36.000 0.00 0.00 37.67 2.85
1402 2975 2.813754 CAATGTTGATCGTCACCTTGGT 59.186 45.455 0.00 0.00 0.00 3.67
1403 2976 2.813754 ACAATGTTGATCGTCACCTTGG 59.186 45.455 0.00 0.00 0.00 3.61
1408 2981 3.878086 ACACACAATGTTGATCGTCAC 57.122 42.857 0.00 0.00 38.98 3.67
1458 3033 3.602390 AACCAAAAGTTCACGATGACG 57.398 42.857 0.00 0.00 38.94 4.35
1515 3098 7.558081 TGAGCACTATGTTCTGATAGACTAGTT 59.442 37.037 0.00 0.00 31.36 2.24
1537 3120 3.906998 ACGATATAGATGCAGTGTGAGC 58.093 45.455 0.00 0.00 0.00 4.26
1572 3155 6.480524 TTCGTAGTTTCCAACAATGATGAG 57.519 37.500 0.00 0.00 0.00 2.90
1579 3162 6.528423 CACAACAATTTCGTAGTTTCCAACAA 59.472 34.615 0.00 0.00 0.00 2.83
1583 3166 5.821516 ACACAACAATTTCGTAGTTTCCA 57.178 34.783 0.00 0.00 0.00 3.53
1751 3335 5.046591 CGGTGGATGACTGTATTACCCATAT 60.047 44.000 0.00 0.00 0.00 1.78
1996 3580 1.869774 GCAAACCTTTTGCTTCCTGG 58.130 50.000 14.89 0.00 41.87 4.45
2020 3604 2.040412 AGCTTGAGTTACCCCTTCCTTG 59.960 50.000 0.00 0.00 0.00 3.61
2021 3605 2.349445 AGCTTGAGTTACCCCTTCCTT 58.651 47.619 0.00 0.00 0.00 3.36
2022 3606 2.046280 AGCTTGAGTTACCCCTTCCT 57.954 50.000 0.00 0.00 0.00 3.36
2041 3625 2.691526 TCTTCGCCGCTTTTCTAGGATA 59.308 45.455 0.00 0.00 0.00 2.59
2089 3673 4.704057 AGAGAATCAAAGGCAACCTGAATC 59.296 41.667 0.00 0.00 37.82 2.52
2121 3706 7.714813 TGTGAACTGTTAATTGAGAGAACATCA 59.285 33.333 1.07 0.00 32.89 3.07
2124 3709 7.857734 TTGTGAACTGTTAATTGAGAGAACA 57.142 32.000 1.07 0.00 0.00 3.18
2180 3765 9.241919 TCTGTACATAATGTCAATGGTCAAAAT 57.758 29.630 0.00 0.00 0.00 1.82
2185 3770 8.492673 TTCTTCTGTACATAATGTCAATGGTC 57.507 34.615 0.00 0.00 0.00 4.02
2189 3774 7.770897 GGGTCTTCTTCTGTACATAATGTCAAT 59.229 37.037 0.00 0.00 0.00 2.57
2194 3779 6.878317 TCAGGGTCTTCTTCTGTACATAATG 58.122 40.000 0.00 0.00 0.00 1.90
2206 3791 4.417426 TTTTCGTTCTCAGGGTCTTCTT 57.583 40.909 0.00 0.00 0.00 2.52
2214 3799 4.988540 TGTGTCAGTATTTTCGTTCTCAGG 59.011 41.667 0.00 0.00 0.00 3.86
2231 3816 6.266330 CCTGAGATGAGGAGTATATTGTGTCA 59.734 42.308 0.00 0.00 34.69 3.58
2246 3831 8.428063 AGAATGTAACCTAAATCCTGAGATGAG 58.572 37.037 0.00 0.00 31.29 2.90
2253 3838 9.853177 AAGGATTAGAATGTAACCTAAATCCTG 57.147 33.333 12.97 0.00 35.53 3.86
2260 3845 8.325787 TGCAGAAAAGGATTAGAATGTAACCTA 58.674 33.333 0.00 0.00 0.00 3.08
2299 3885 6.456315 CCGTATTTGTGAACGCATAATTCAGA 60.456 38.462 0.00 0.00 36.76 3.27
2321 3907 9.692749 CGACCAATATGATATAATATAAGCCGT 57.307 33.333 0.00 0.00 0.00 5.68
2322 3908 8.648097 GCGACCAATATGATATAATATAAGCCG 58.352 37.037 0.00 0.00 0.00 5.52
2323 3909 8.936864 GGCGACCAATATGATATAATATAAGCC 58.063 37.037 0.00 2.04 0.00 4.35
2324 3910 8.648097 CGGCGACCAATATGATATAATATAAGC 58.352 37.037 0.00 0.00 0.00 3.09
2338 3924 1.741145 GGTGAAAACGGCGACCAATAT 59.259 47.619 16.62 0.00 0.00 1.28
2343 3929 1.158434 TAATGGTGAAAACGGCGACC 58.842 50.000 16.62 11.29 0.00 4.79
2347 3933 6.560711 ACATAATCTTAATGGTGAAAACGGC 58.439 36.000 0.00 0.00 0.00 5.68
2362 3948 9.647918 TCAGTGTCTTCTCCTATACATAATCTT 57.352 33.333 0.00 0.00 0.00 2.40
2373 3959 2.451490 CAGGCTCAGTGTCTTCTCCTA 58.549 52.381 0.00 0.00 0.00 2.94
2543 4130 0.250513 AATGTCCTCGGTGCCTTCTC 59.749 55.000 0.00 0.00 0.00 2.87
2704 4291 0.814010 ACAGCCACGAACACAGGAAC 60.814 55.000 0.00 0.00 0.00 3.62
2781 4411 3.914312 TGAACGACAACTTTGGCAAAAA 58.086 36.364 14.43 0.00 35.35 1.94
2834 4464 6.772360 TGCAATGGATTAAACTGCTCATAA 57.228 33.333 0.00 0.00 34.10 1.90
2870 4500 8.637281 TTCATGCAATCAATATAAAAGCACAG 57.363 30.769 0.00 0.00 32.92 3.66
3004 4718 6.994421 AACTTAAAATCCACAATGTTCCCT 57.006 33.333 0.00 0.00 0.00 4.20
3059 4774 8.959705 ATGATAACTTAAACTGCTACCTTACC 57.040 34.615 0.00 0.00 0.00 2.85
3085 4800 6.462487 CGCTGATTTAGTATTGGAGGGACTAA 60.462 42.308 0.00 0.00 41.55 2.24
3086 4801 5.010719 CGCTGATTTAGTATTGGAGGGACTA 59.989 44.000 0.00 0.00 41.55 2.59
3088 4803 4.058817 CGCTGATTTAGTATTGGAGGGAC 58.941 47.826 0.00 0.00 0.00 4.46
3089 4804 3.964688 TCGCTGATTTAGTATTGGAGGGA 59.035 43.478 0.00 0.00 0.00 4.20
3090 4805 4.058817 GTCGCTGATTTAGTATTGGAGGG 58.941 47.826 0.00 0.00 0.00 4.30
3091 4806 4.693283 TGTCGCTGATTTAGTATTGGAGG 58.307 43.478 0.00 0.00 0.00 4.30
3092 4807 6.851222 ATTGTCGCTGATTTAGTATTGGAG 57.149 37.500 0.00 0.00 0.00 3.86
3093 4808 8.725405 TTAATTGTCGCTGATTTAGTATTGGA 57.275 30.769 0.00 0.00 0.00 3.53
3098 4813 9.990360 TCCATATTAATTGTCGCTGATTTAGTA 57.010 29.630 0.00 0.00 0.00 1.82
3099 4814 8.902540 TCCATATTAATTGTCGCTGATTTAGT 57.097 30.769 0.00 0.00 0.00 2.24
3100 4815 9.979270 GATCCATATTAATTGTCGCTGATTTAG 57.021 33.333 0.00 0.00 0.00 1.85
3101 4816 9.500785 TGATCCATATTAATTGTCGCTGATTTA 57.499 29.630 0.00 0.00 0.00 1.40
3102 4817 8.394971 TGATCCATATTAATTGTCGCTGATTT 57.605 30.769 0.00 0.00 0.00 2.17
3103 4818 7.879677 TCTGATCCATATTAATTGTCGCTGATT 59.120 33.333 0.00 0.00 0.00 2.57
3104 4819 7.389232 TCTGATCCATATTAATTGTCGCTGAT 58.611 34.615 0.00 0.00 0.00 2.90
3105 4820 6.758254 TCTGATCCATATTAATTGTCGCTGA 58.242 36.000 0.00 0.00 0.00 4.26
3106 4821 6.091849 CCTCTGATCCATATTAATTGTCGCTG 59.908 42.308 0.00 0.00 0.00 5.18
3107 4822 6.169094 CCTCTGATCCATATTAATTGTCGCT 58.831 40.000 0.00 0.00 0.00 4.93
3108 4823 5.352569 CCCTCTGATCCATATTAATTGTCGC 59.647 44.000 0.00 0.00 0.00 5.19
3109 4824 6.701340 TCCCTCTGATCCATATTAATTGTCG 58.299 40.000 0.00 0.00 0.00 4.35
3110 4825 7.684529 ACTCCCTCTGATCCATATTAATTGTC 58.315 38.462 0.00 0.00 0.00 3.18
3111 4826 7.639062 ACTCCCTCTGATCCATATTAATTGT 57.361 36.000 0.00 0.00 0.00 2.71
3112 4827 8.597167 TGTACTCCCTCTGATCCATATTAATTG 58.403 37.037 0.00 0.00 0.00 2.32
3113 4828 8.742125 TGTACTCCCTCTGATCCATATTAATT 57.258 34.615 0.00 0.00 0.00 1.40
3114 4829 8.742125 TTGTACTCCCTCTGATCCATATTAAT 57.258 34.615 0.00 0.00 0.00 1.40
3115 4830 7.789831 ACTTGTACTCCCTCTGATCCATATTAA 59.210 37.037 0.00 0.00 0.00 1.40
3116 4831 7.306013 ACTTGTACTCCCTCTGATCCATATTA 58.694 38.462 0.00 0.00 0.00 0.98
3117 4832 6.146760 ACTTGTACTCCCTCTGATCCATATT 58.853 40.000 0.00 0.00 0.00 1.28
3118 4833 5.721225 ACTTGTACTCCCTCTGATCCATAT 58.279 41.667 0.00 0.00 0.00 1.78
3119 4834 5.144159 ACTTGTACTCCCTCTGATCCATA 57.856 43.478 0.00 0.00 0.00 2.74
3120 4835 4.000928 ACTTGTACTCCCTCTGATCCAT 57.999 45.455 0.00 0.00 0.00 3.41
3121 4836 3.474798 ACTTGTACTCCCTCTGATCCA 57.525 47.619 0.00 0.00 0.00 3.41
3122 4837 5.187186 TGTTTACTTGTACTCCCTCTGATCC 59.813 44.000 0.00 0.00 0.00 3.36
3123 4838 6.282199 TGTTTACTTGTACTCCCTCTGATC 57.718 41.667 0.00 0.00 0.00 2.92
3124 4839 6.681729 TTGTTTACTTGTACTCCCTCTGAT 57.318 37.500 0.00 0.00 0.00 2.90
3125 4840 6.042781 ACATTGTTTACTTGTACTCCCTCTGA 59.957 38.462 0.00 0.00 0.00 3.27
3126 4841 6.147821 CACATTGTTTACTTGTACTCCCTCTG 59.852 42.308 0.00 0.00 0.00 3.35
3127 4842 6.231211 CACATTGTTTACTTGTACTCCCTCT 58.769 40.000 0.00 0.00 0.00 3.69
3128 4843 5.106673 GCACATTGTTTACTTGTACTCCCTC 60.107 44.000 0.00 0.00 0.00 4.30
3129 4844 4.760204 GCACATTGTTTACTTGTACTCCCT 59.240 41.667 0.00 0.00 0.00 4.20
3130 4845 4.760204 AGCACATTGTTTACTTGTACTCCC 59.240 41.667 0.00 0.00 0.00 4.30
3131 4846 5.468746 TGAGCACATTGTTTACTTGTACTCC 59.531 40.000 0.00 0.00 34.34 3.85
3132 4847 6.423905 TCTGAGCACATTGTTTACTTGTACTC 59.576 38.462 0.00 8.55 35.33 2.59
3133 4848 6.288294 TCTGAGCACATTGTTTACTTGTACT 58.712 36.000 0.00 0.00 0.00 2.73
3139 4854 6.000219 AGACAATCTGAGCACATTGTTTACT 59.000 36.000 5.75 0.00 37.37 2.24
3144 4859 4.139786 ACAAGACAATCTGAGCACATTGT 58.860 39.130 4.17 4.17 39.62 2.71
3216 4938 7.063593 AGTAAGTTGACTGCATATCCTAGAGA 58.936 38.462 0.00 0.00 0.00 3.10
3287 5010 5.248477 AGAGTAACTCCAGCCTGATGTAAAA 59.752 40.000 0.00 0.00 0.00 1.52
3325 5048 7.770433 TGACAGATCAACAAATATGACTTAGGG 59.230 37.037 0.00 0.00 0.00 3.53
3328 5051 9.154847 CAGTGACAGATCAACAAATATGACTTA 57.845 33.333 0.00 0.00 36.31 2.24
3418 5146 3.124297 GCTGCAGTATCACAGTTTGACTC 59.876 47.826 16.64 0.00 36.92 3.36
3499 5227 0.032813 CAGGCCCACAAAGGATGGAT 60.033 55.000 0.00 0.00 39.87 3.41
3635 5366 4.096833 TGCACTGGAATGTAGCATTGATTC 59.903 41.667 0.00 0.00 0.00 2.52
3646 5377 0.537143 TTCCGCTTGCACTGGAATGT 60.537 50.000 8.93 0.00 36.87 2.71
3653 5384 1.598130 GACCAGTTCCGCTTGCACT 60.598 57.895 0.00 0.00 0.00 4.40
3744 7381 1.534729 CTTTGCCCTGGTTCTACCAC 58.465 55.000 0.00 0.00 44.79 4.16
4020 7657 3.511540 TCTTGTCGACATTCATCTCCTGT 59.488 43.478 20.80 0.00 0.00 4.00
4080 7717 5.555017 ACACTGCTCTTGTTCATTACTGAT 58.445 37.500 0.00 0.00 0.00 2.90
4213 7857 9.260002 CATTAAAACAACAGGTTAGCTGAAATT 57.740 29.630 18.76 5.81 39.29 1.82
4362 8011 1.226859 CTTCGCGTCGCCAATCCTA 60.227 57.895 12.44 0.00 0.00 2.94
4542 8191 5.013287 AGCAGAATAGCCATCAGAGATTCAT 59.987 40.000 0.00 0.00 34.23 2.57
4891 8540 4.202503 ACTGAATGTGGATTCCAACAGACT 60.203 41.667 24.09 10.22 37.74 3.24
5445 9095 2.385803 TGTTTTACCTCCCCGCAAAAA 58.614 42.857 0.00 0.00 0.00 1.94
5446 9096 2.068834 TGTTTTACCTCCCCGCAAAA 57.931 45.000 0.00 0.00 0.00 2.44
5447 9097 2.296073 ATGTTTTACCTCCCCGCAAA 57.704 45.000 0.00 0.00 0.00 3.68
5448 9098 2.296073 AATGTTTTACCTCCCCGCAA 57.704 45.000 0.00 0.00 0.00 4.85
5449 9099 2.306512 AGTAATGTTTTACCTCCCCGCA 59.693 45.455 0.00 0.00 38.81 5.69
5450 9100 2.995283 AGTAATGTTTTACCTCCCCGC 58.005 47.619 0.00 0.00 38.81 6.13
5451 9101 7.389607 CCATATAAGTAATGTTTTACCTCCCCG 59.610 40.741 0.00 0.00 38.81 5.73
5452 9102 8.442374 TCCATATAAGTAATGTTTTACCTCCCC 58.558 37.037 0.00 0.00 38.81 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.