Multiple sequence alignment - TraesCS4B01G070000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G070000 chr4B 100.000 7883 0 0 1 7883 64076980 64084862 0.000000e+00 14558.0
1 TraesCS4B01G070000 chr4B 87.415 1025 98 14 4828 5831 64103475 64104489 0.000000e+00 1149.0
2 TraesCS4B01G070000 chr4B 90.341 528 47 4 5850 6375 64104620 64105145 0.000000e+00 689.0
3 TraesCS4B01G070000 chr4B 82.739 533 51 25 917 1435 64093454 64093959 3.380000e-118 436.0
4 TraesCS4B01G070000 chr4B 82.752 487 56 18 6425 6892 64105146 64105623 7.360000e-110 409.0
5 TraesCS4B01G070000 chr4B 83.333 204 21 9 3946 4145 92475362 92475168 8.130000e-40 176.0
6 TraesCS4B01G070000 chr4A 85.695 2992 244 77 1052 3911 555564325 555561386 0.000000e+00 2985.0
7 TraesCS4B01G070000 chr4A 90.701 2054 119 22 4889 6892 555561178 555559147 0.000000e+00 2669.0
8 TraesCS4B01G070000 chr4A 86.392 1580 160 28 4828 6375 555517716 555516160 0.000000e+00 1676.0
9 TraesCS4B01G070000 chr4A 84.831 534 43 18 917 1438 555523974 555523467 3.280000e-138 503.0
10 TraesCS4B01G070000 chr4A 91.092 348 15 7 499 831 555565278 555564932 2.590000e-124 457.0
11 TraesCS4B01G070000 chr4A 82.150 493 49 22 6427 6892 555516157 555515677 3.450000e-103 387.0
12 TraesCS4B01G070000 chr4A 85.096 208 12 4 819 1022 555564517 555564325 2.240000e-45 195.0
13 TraesCS4B01G070000 chr4A 80.176 227 31 11 3942 4165 10222739 10222954 2.940000e-34 158.0
14 TraesCS4B01G070000 chr4A 84.800 125 10 6 376 499 555566766 555566650 5.000000e-22 117.0
15 TraesCS4B01G070000 chr4A 94.340 53 3 0 7831 7883 555559154 555559102 1.820000e-11 82.4
16 TraesCS4B01G070000 chr4A 97.143 35 1 0 4794 4828 627674070 627674036 8.540000e-05 60.2
17 TraesCS4B01G070000 chr4D 91.940 1526 74 21 4889 6388 44422843 44424345 0.000000e+00 2091.0
18 TraesCS4B01G070000 chr4D 88.126 1019 96 11 4828 5831 44435226 44436234 0.000000e+00 1188.0
19 TraesCS4B01G070000 chr4D 86.710 933 101 16 3692 4611 44421280 44422202 0.000000e+00 1014.0
20 TraesCS4B01G070000 chr4D 91.231 593 26 8 1052 1628 44419014 44419596 0.000000e+00 784.0
21 TraesCS4B01G070000 chr4D 85.468 695 56 26 2300 2952 44420330 44421021 0.000000e+00 682.0
22 TraesCS4B01G070000 chr4D 89.981 529 50 3 5850 6377 44436364 44436890 0.000000e+00 680.0
23 TraesCS4B01G070000 chr4D 90.495 505 29 7 6405 6892 44424327 44424829 0.000000e+00 649.0
24 TraesCS4B01G070000 chr4D 88.641 537 28 8 499 1022 44418498 44419014 2.420000e-174 623.0
25 TraesCS4B01G070000 chr4D 87.818 550 41 12 1695 2228 44419626 44420165 8.690000e-174 621.0
26 TraesCS4B01G070000 chr4D 87.160 405 35 15 7434 7829 436888276 436888672 2.020000e-120 444.0
27 TraesCS4B01G070000 chr4D 85.135 444 35 18 1003 1435 44431206 44431629 7.310000e-115 425.0
28 TraesCS4B01G070000 chr4D 88.286 350 35 6 110 457 44414322 44414667 1.580000e-111 414.0
29 TraesCS4B01G070000 chr4D 81.911 492 55 21 6426 6892 44436890 44437372 1.240000e-102 385.0
30 TraesCS4B01G070000 chr4D 80.176 227 30 12 3942 4165 458939977 458939763 1.060000e-33 156.0
31 TraesCS4B01G070000 chr4D 82.927 123 21 0 2576 2698 44432787 44432909 2.330000e-20 111.0
32 TraesCS4B01G070000 chr6B 98.514 942 10 4 6894 7832 716580426 716581366 0.000000e+00 1659.0
33 TraesCS4B01G070000 chr6B 84.444 225 20 14 3945 4160 31732975 31732757 2.880000e-49 207.0
34 TraesCS4B01G070000 chr6B 97.143 35 1 0 4794 4828 672882870 672882836 8.540000e-05 60.2
35 TraesCS4B01G070000 chrUn 84.962 798 98 15 4891 5680 183186555 183185772 0.000000e+00 789.0
36 TraesCS4B01G070000 chrUn 86.603 627 54 17 7226 7830 62171466 62170848 0.000000e+00 665.0
37 TraesCS4B01G070000 chrUn 86.603 627 54 17 7226 7830 293737803 293738421 0.000000e+00 665.0
38 TraesCS4B01G070000 chrUn 78.485 1162 142 56 5727 6838 183133144 183132041 0.000000e+00 662.0
39 TraesCS4B01G070000 chrUn 78.467 1161 140 61 5727 6836 183185681 183184580 0.000000e+00 658.0
40 TraesCS4B01G070000 chrUn 80.493 446 56 21 6417 6836 254882783 254882343 5.940000e-81 313.0
41 TraesCS4B01G070000 chrUn 80.702 228 36 7 3944 4165 34314220 34314445 3.780000e-38 171.0
42 TraesCS4B01G070000 chrUn 79.279 222 35 7 3942 4160 34306431 34306218 2.290000e-30 145.0
43 TraesCS4B01G070000 chrUn 79.279 222 35 7 3942 4160 330415441 330415228 2.290000e-30 145.0
44 TraesCS4B01G070000 chrUn 97.143 35 1 0 4794 4828 309588719 309588753 8.540000e-05 60.2
45 TraesCS4B01G070000 chrUn 97.143 35 1 0 4794 4828 361599629 361599595 8.540000e-05 60.2
46 TraesCS4B01G070000 chr2A 84.935 770 102 13 4882 5647 750178244 750177485 0.000000e+00 767.0
47 TraesCS4B01G070000 chr2A 80.602 665 74 21 5727 6365 750177359 750176724 5.570000e-126 462.0
48 TraesCS4B01G070000 chr2A 90.244 246 23 1 7226 7470 775066965 775067210 3.550000e-83 320.0
49 TraesCS4B01G070000 chr2A 83.483 333 42 7 6899 7224 775066595 775066921 1.660000e-76 298.0
50 TraesCS4B01G070000 chr2A 90.955 199 16 2 1207 1404 750180538 750180341 4.690000e-67 267.0
51 TraesCS4B01G070000 chr2A 85.492 193 17 6 7039 7224 77320251 77320063 2.900000e-44 191.0
52 TraesCS4B01G070000 chr7D 84.794 776 94 14 4899 5665 498270215 498270975 0.000000e+00 758.0
53 TraesCS4B01G070000 chr7D 81.132 689 78 20 5727 6390 498271082 498271743 9.130000e-139 505.0
54 TraesCS4B01G070000 chr7D 81.718 454 59 17 6408 6838 498271729 498272181 2.710000e-94 357.0
55 TraesCS4B01G070000 chr7D 90.050 201 18 2 1207 1406 498264202 498264401 7.850000e-65 259.0
56 TraesCS4B01G070000 chr7D 86.047 86 11 1 3941 4026 616028457 616028541 3.030000e-14 91.6
57 TraesCS4B01G070000 chr2D 86.297 686 51 19 7132 7787 607952984 607953656 0.000000e+00 706.0
58 TraesCS4B01G070000 chr2D 90.647 278 25 1 6899 7175 607952664 607952941 1.250000e-97 368.0
59 TraesCS4B01G070000 chr2D 78.417 278 44 11 3945 4218 33915792 33915527 4.890000e-37 167.0
60 TraesCS4B01G070000 chr2D 100.000 44 0 0 7784 7827 607955082 607955125 1.820000e-11 82.4
61 TraesCS4B01G070000 chr2B 83.227 787 107 18 4891 5671 757193209 757193976 0.000000e+00 699.0
62 TraesCS4B01G070000 chr2B 80.401 898 111 35 5856 6746 757194360 757195199 2.420000e-174 623.0
63 TraesCS4B01G070000 chr2B 100.000 32 0 0 4796 4827 70791220 70791189 8.540000e-05 60.2
64 TraesCS4B01G070000 chr7A 91.463 246 20 1 7226 7470 702245138 702245383 3.520000e-88 337.0
65 TraesCS4B01G070000 chr7A 82.969 229 33 6 3942 4169 679766198 679765975 1.340000e-47 202.0
66 TraesCS4B01G070000 chr5A 80.969 289 37 12 3942 4218 657567642 657567360 6.200000e-51 213.0
67 TraesCS4B01G070000 chr5A 93.333 45 3 0 7787 7831 556819843 556819887 5.110000e-07 67.6
68 TraesCS4B01G070000 chr5A 93.333 45 3 0 7787 7831 590382001 590382045 5.110000e-07 67.6
69 TraesCS4B01G070000 chr5A 97.059 34 1 0 7787 7820 556826638 556826605 3.070000e-04 58.4
70 TraesCS4B01G070000 chr3D 87.432 183 23 0 1218 1400 13190280 13190462 2.230000e-50 211.0
71 TraesCS4B01G070000 chr3B 86.339 183 25 0 1218 1400 18871022 18871204 4.820000e-47 200.0
72 TraesCS4B01G070000 chr3A 85.792 183 26 0 1218 1400 24005103 24004921 2.240000e-45 195.0
73 TraesCS4B01G070000 chr1D 82.432 222 26 6 3952 4173 124315003 124314795 1.750000e-41 182.0
74 TraesCS4B01G070000 chr1D 100.000 34 0 0 4794 4827 490583120 490583087 6.600000e-06 63.9
75 TraesCS4B01G070000 chr5B 79.323 266 42 9 3964 4218 535454512 535454775 2.920000e-39 174.0
76 TraesCS4B01G070000 chr5D 91.453 117 10 0 7085 7201 13786242 13786126 2.280000e-35 161.0
77 TraesCS4B01G070000 chr7B 79.452 219 38 5 3942 4159 139852491 139852279 1.770000e-31 148.0
78 TraesCS4B01G070000 chr7B 97.222 36 1 0 4793 4828 401008478 401008443 2.380000e-05 62.1
79 TraesCS4B01G070000 chr7B 94.595 37 1 1 4794 4830 377324154 377324189 1.000000e-03 56.5
80 TraesCS4B01G070000 chr6A 77.679 224 32 14 3945 4160 352617884 352617671 3.860000e-23 121.0
81 TraesCS4B01G070000 chr1B 97.059 34 1 0 4796 4829 61959859 61959826 3.070000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G070000 chr4B 64076980 64084862 7882 False 14558.000000 14558 100.000000 1 7883 1 chr4B.!!$F1 7882
1 TraesCS4B01G070000 chr4B 64103475 64105623 2148 False 749.000000 1149 86.836000 4828 6892 3 chr4B.!!$F3 2064
2 TraesCS4B01G070000 chr4B 64093454 64093959 505 False 436.000000 436 82.739000 917 1435 1 chr4B.!!$F2 518
3 TraesCS4B01G070000 chr4A 555559102 555566766 7664 True 1084.233333 2985 88.620667 376 7883 6 chr4A.!!$R4 7507
4 TraesCS4B01G070000 chr4A 555515677 555517716 2039 True 1031.500000 1676 84.271000 4828 6892 2 chr4A.!!$R3 2064
5 TraesCS4B01G070000 chr4A 555523467 555523974 507 True 503.000000 503 84.831000 917 1438 1 chr4A.!!$R1 521
6 TraesCS4B01G070000 chr4D 44414322 44424829 10507 False 859.750000 2091 88.823625 110 6892 8 chr4D.!!$F2 6782
7 TraesCS4B01G070000 chr4D 44431206 44437372 6166 False 557.800000 1188 85.616000 1003 6892 5 chr4D.!!$F3 5889
8 TraesCS4B01G070000 chr6B 716580426 716581366 940 False 1659.000000 1659 98.514000 6894 7832 1 chr6B.!!$F1 938
9 TraesCS4B01G070000 chrUn 183184580 183186555 1975 True 723.500000 789 81.714500 4891 6836 2 chrUn.!!$R7 1945
10 TraesCS4B01G070000 chrUn 62170848 62171466 618 True 665.000000 665 86.603000 7226 7830 1 chrUn.!!$R2 604
11 TraesCS4B01G070000 chrUn 293737803 293738421 618 False 665.000000 665 86.603000 7226 7830 1 chrUn.!!$F2 604
12 TraesCS4B01G070000 chrUn 183132041 183133144 1103 True 662.000000 662 78.485000 5727 6838 1 chrUn.!!$R3 1111
13 TraesCS4B01G070000 chr2A 750176724 750180538 3814 True 498.666667 767 85.497333 1207 6365 3 chr2A.!!$R2 5158
14 TraesCS4B01G070000 chr2A 775066595 775067210 615 False 309.000000 320 86.863500 6899 7470 2 chr2A.!!$F1 571
15 TraesCS4B01G070000 chr7D 498270215 498272181 1966 False 540.000000 758 82.548000 4899 6838 3 chr7D.!!$F3 1939
16 TraesCS4B01G070000 chr2D 607952664 607955125 2461 False 385.466667 706 92.314667 6899 7827 3 chr2D.!!$F1 928
17 TraesCS4B01G070000 chr2B 757193209 757195199 1990 False 661.000000 699 81.814000 4891 6746 2 chr2B.!!$F1 1855

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
68 69 0.034059 AGGACAAGAACGCAGACAGG 59.966 55.0 0.00 0.0 0.00 4.00 F
325 327 0.034059 GATATGAGTGCCTCCACCCG 59.966 60.0 0.50 0.0 43.09 5.28 F
1224 5749 0.407139 AAGATGGTGGGCAAGAGCTT 59.593 50.0 0.00 0.0 41.70 3.74 F
1978 6770 0.603065 TCTCTCTGCGTGCTTGCTTA 59.397 50.0 2.56 0.0 35.36 3.09 F
2691 7934 0.030235 GTGCACGGGGAAAAGTTGAC 59.970 55.0 0.00 0.0 0.00 3.18 F
2981 8292 0.311790 AAAACTGCCGCACATGACTG 59.688 50.0 0.00 0.0 0.00 3.51 F
3841 9626 0.393537 AGCTCGAGCCTGGAATTTGG 60.394 55.0 32.94 0.0 43.38 3.28 F
4756 11225 0.747852 TCCACACAGAGTGCGTGTAA 59.252 50.0 0.00 0.0 45.63 2.41 F
6150 13347 0.034896 CACCACTACACCCACCAGTC 59.965 60.0 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1041 5551 0.037975 CCGGCCGGTGTATGTATACC 60.038 60.0 36.64 0.00 34.50 2.73 R
2280 7415 0.405198 TCACCATGTGCCATTGGAGT 59.595 50.0 6.95 0.00 36.79 3.85 R
2387 7576 0.250252 TGCTGCTTTCATCGGTGTCA 60.250 50.0 0.00 0.00 0.00 3.58 R
3815 9580 0.249657 CCAGGCTCGAGCTCCATTAC 60.250 60.0 34.46 17.44 41.70 1.89 R
4370 10422 0.620990 TAACCCGCCCCTCCAACATA 60.621 55.0 0.00 0.00 0.00 2.29 R
4887 11684 0.390124 AGCTGCAAACACAACCCATG 59.610 50.0 1.02 0.00 0.00 3.66 R
5162 11965 0.108585 TCTGCGCCTGGAAGAACTTT 59.891 50.0 4.18 0.00 34.07 2.66 R
6204 13401 0.304705 CTGCACAGTGACACCGAAAC 59.695 55.0 4.15 0.00 0.00 2.78 R
7838 16727 0.682855 GGCCGATTTCCCCAATGACA 60.683 55.0 0.00 0.00 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 6.616774 AAAAGGTTGGTAAATGCAAATGTG 57.383 33.333 0.00 0.00 0.00 3.21
37 38 4.953940 AGGTTGGTAAATGCAAATGTGT 57.046 36.364 0.00 0.00 0.00 3.72
38 39 4.630111 AGGTTGGTAAATGCAAATGTGTG 58.370 39.130 0.00 0.00 0.00 3.82
39 40 3.745458 GGTTGGTAAATGCAAATGTGTGG 59.255 43.478 0.00 0.00 0.00 4.17
40 41 4.376146 GTTGGTAAATGCAAATGTGTGGT 58.624 39.130 0.00 0.00 0.00 4.16
41 42 3.987547 TGGTAAATGCAAATGTGTGGTG 58.012 40.909 0.00 0.00 0.00 4.17
42 43 3.638627 TGGTAAATGCAAATGTGTGGTGA 59.361 39.130 0.00 0.00 0.00 4.02
43 44 4.236935 GGTAAATGCAAATGTGTGGTGAG 58.763 43.478 0.00 0.00 0.00 3.51
44 45 4.261994 GGTAAATGCAAATGTGTGGTGAGT 60.262 41.667 0.00 0.00 0.00 3.41
45 46 5.048364 GGTAAATGCAAATGTGTGGTGAGTA 60.048 40.000 0.00 0.00 0.00 2.59
46 47 4.771590 AATGCAAATGTGTGGTGAGTAG 57.228 40.909 0.00 0.00 0.00 2.57
47 48 1.879380 TGCAAATGTGTGGTGAGTAGC 59.121 47.619 0.00 0.00 0.00 3.58
48 49 2.154462 GCAAATGTGTGGTGAGTAGCT 58.846 47.619 0.00 0.00 0.00 3.32
49 50 3.244387 TGCAAATGTGTGGTGAGTAGCTA 60.244 43.478 0.00 0.00 0.00 3.32
50 51 3.372206 GCAAATGTGTGGTGAGTAGCTAG 59.628 47.826 0.00 0.00 0.00 3.42
51 52 3.895232 AATGTGTGGTGAGTAGCTAGG 57.105 47.619 0.00 0.00 0.00 3.02
52 53 2.597578 TGTGTGGTGAGTAGCTAGGA 57.402 50.000 0.00 0.00 0.00 2.94
53 54 2.168496 TGTGTGGTGAGTAGCTAGGAC 58.832 52.381 0.00 0.00 0.00 3.85
54 55 2.168496 GTGTGGTGAGTAGCTAGGACA 58.832 52.381 0.00 0.00 0.00 4.02
55 56 2.561419 GTGTGGTGAGTAGCTAGGACAA 59.439 50.000 0.00 0.00 0.00 3.18
56 57 2.826128 TGTGGTGAGTAGCTAGGACAAG 59.174 50.000 0.00 0.00 0.00 3.16
57 58 3.090037 GTGGTGAGTAGCTAGGACAAGA 58.910 50.000 0.00 0.00 0.00 3.02
58 59 3.510360 GTGGTGAGTAGCTAGGACAAGAA 59.490 47.826 0.00 0.00 0.00 2.52
59 60 3.510360 TGGTGAGTAGCTAGGACAAGAAC 59.490 47.826 0.00 0.00 0.00 3.01
60 61 3.427773 GGTGAGTAGCTAGGACAAGAACG 60.428 52.174 0.00 0.00 0.00 3.95
61 62 2.163815 TGAGTAGCTAGGACAAGAACGC 59.836 50.000 0.00 0.00 0.00 4.84
62 63 2.163815 GAGTAGCTAGGACAAGAACGCA 59.836 50.000 0.00 0.00 0.00 5.24
63 64 2.164624 AGTAGCTAGGACAAGAACGCAG 59.835 50.000 0.00 0.00 0.00 5.18
64 65 1.257743 AGCTAGGACAAGAACGCAGA 58.742 50.000 0.00 0.00 0.00 4.26
65 66 1.067495 AGCTAGGACAAGAACGCAGAC 60.067 52.381 0.00 0.00 0.00 3.51
66 67 1.336887 GCTAGGACAAGAACGCAGACA 60.337 52.381 0.00 0.00 0.00 3.41
67 68 2.600731 CTAGGACAAGAACGCAGACAG 58.399 52.381 0.00 0.00 0.00 3.51
68 69 0.034059 AGGACAAGAACGCAGACAGG 59.966 55.000 0.00 0.00 0.00 4.00
69 70 1.569479 GGACAAGAACGCAGACAGGC 61.569 60.000 0.00 0.00 0.00 4.85
70 71 0.880278 GACAAGAACGCAGACAGGCA 60.880 55.000 0.00 0.00 0.00 4.75
71 72 0.882042 ACAAGAACGCAGACAGGCAG 60.882 55.000 0.00 0.00 0.00 4.85
72 73 1.963338 AAGAACGCAGACAGGCAGC 60.963 57.895 0.00 0.00 0.00 5.25
77 78 4.687215 GCAGACAGGCAGCGGTGA 62.687 66.667 20.69 0.00 0.00 4.02
78 79 2.740055 CAGACAGGCAGCGGTGAC 60.740 66.667 20.69 17.47 0.00 3.67
79 80 3.233980 AGACAGGCAGCGGTGACA 61.234 61.111 24.58 0.00 31.79 3.58
80 81 2.046892 GACAGGCAGCGGTGACAT 60.047 61.111 24.58 10.47 31.79 3.06
81 82 2.359107 ACAGGCAGCGGTGACATG 60.359 61.111 24.58 20.31 31.79 3.21
82 83 3.129502 CAGGCAGCGGTGACATGG 61.130 66.667 24.58 7.87 31.79 3.66
83 84 4.415150 AGGCAGCGGTGACATGGG 62.415 66.667 24.58 0.00 31.79 4.00
84 85 4.408821 GGCAGCGGTGACATGGGA 62.409 66.667 20.69 0.00 0.00 4.37
85 86 2.821366 GCAGCGGTGACATGGGAG 60.821 66.667 20.69 0.00 0.00 4.30
86 87 2.981302 CAGCGGTGACATGGGAGA 59.019 61.111 9.50 0.00 0.00 3.71
87 88 1.524002 CAGCGGTGACATGGGAGAT 59.476 57.895 9.50 0.00 0.00 2.75
88 89 0.107508 CAGCGGTGACATGGGAGATT 60.108 55.000 9.50 0.00 0.00 2.40
89 90 0.107508 AGCGGTGACATGGGAGATTG 60.108 55.000 0.00 0.00 0.00 2.67
90 91 0.107703 GCGGTGACATGGGAGATTGA 60.108 55.000 0.00 0.00 0.00 2.57
91 92 1.656652 CGGTGACATGGGAGATTGAC 58.343 55.000 0.00 0.00 0.00 3.18
92 93 1.066215 CGGTGACATGGGAGATTGACA 60.066 52.381 0.00 0.00 0.00 3.58
93 94 2.636830 GGTGACATGGGAGATTGACAG 58.363 52.381 0.00 0.00 0.00 3.51
94 95 2.237143 GGTGACATGGGAGATTGACAGA 59.763 50.000 0.00 0.00 0.00 3.41
95 96 3.307691 GGTGACATGGGAGATTGACAGAA 60.308 47.826 0.00 0.00 0.00 3.02
96 97 3.686726 GTGACATGGGAGATTGACAGAAC 59.313 47.826 0.00 0.00 0.00 3.01
97 98 3.327464 TGACATGGGAGATTGACAGAACA 59.673 43.478 0.00 0.00 0.00 3.18
98 99 4.202451 TGACATGGGAGATTGACAGAACAA 60.202 41.667 0.00 0.00 0.00 2.83
99 100 4.728772 ACATGGGAGATTGACAGAACAAA 58.271 39.130 0.00 0.00 33.44 2.83
100 101 5.327732 ACATGGGAGATTGACAGAACAAAT 58.672 37.500 0.00 0.00 33.44 2.32
101 102 5.184479 ACATGGGAGATTGACAGAACAAATG 59.816 40.000 0.00 0.00 33.44 2.32
102 103 3.507233 TGGGAGATTGACAGAACAAATGC 59.493 43.478 0.00 0.00 33.44 3.56
103 104 3.507233 GGGAGATTGACAGAACAAATGCA 59.493 43.478 0.00 0.00 33.44 3.96
104 105 4.159135 GGGAGATTGACAGAACAAATGCAT 59.841 41.667 0.00 0.00 33.44 3.96
105 106 5.338365 GGAGATTGACAGAACAAATGCATC 58.662 41.667 0.00 0.00 33.44 3.91
106 107 5.320549 AGATTGACAGAACAAATGCATCC 57.679 39.130 0.00 0.00 33.44 3.51
107 108 3.557577 TTGACAGAACAAATGCATCCG 57.442 42.857 0.00 0.00 0.00 4.18
108 109 2.777094 TGACAGAACAAATGCATCCGA 58.223 42.857 0.00 0.00 0.00 4.55
116 117 5.234116 AGAACAAATGCATCCGAACAAAAAC 59.766 36.000 0.00 0.00 0.00 2.43
127 128 5.040635 TCCGAACAAAAACTCTTGAATTGC 58.959 37.500 0.00 0.00 0.00 3.56
151 152 4.040706 AGTCCATTTCAATGCATTGGTTGT 59.959 37.500 33.22 17.46 38.30 3.32
154 155 5.469421 TCCATTTCAATGCATTGGTTGTTTC 59.531 36.000 33.22 0.00 38.30 2.78
159 160 4.219507 TCAATGCATTGGTTGTTTCGGTAT 59.780 37.500 33.22 0.00 38.30 2.73
165 166 3.840890 TGGTTGTTTCGGTATTGCATC 57.159 42.857 0.00 0.00 0.00 3.91
169 170 2.364632 TGTTTCGGTATTGCATCCCAG 58.635 47.619 0.00 0.00 0.00 4.45
175 176 2.951642 CGGTATTGCATCCCAGTTCAAT 59.048 45.455 0.00 0.00 34.08 2.57
180 181 5.687166 ATTGCATCCCAGTTCAATTCAAT 57.313 34.783 0.00 0.00 0.00 2.57
186 187 3.364549 CCCAGTTCAATTCAATGGGCTA 58.635 45.455 6.72 0.00 43.91 3.93
188 189 4.381932 CCCAGTTCAATTCAATGGGCTAAC 60.382 45.833 6.72 0.00 43.91 2.34
189 190 4.220382 CCAGTTCAATTCAATGGGCTAACA 59.780 41.667 0.00 0.00 0.00 2.41
192 193 6.366877 CAGTTCAATTCAATGGGCTAACAAAG 59.633 38.462 0.00 0.00 0.00 2.77
193 194 6.267471 AGTTCAATTCAATGGGCTAACAAAGA 59.733 34.615 0.00 0.00 0.00 2.52
194 195 6.024552 TCAATTCAATGGGCTAACAAAGAC 57.975 37.500 0.00 0.00 0.00 3.01
195 196 4.701956 ATTCAATGGGCTAACAAAGACG 57.298 40.909 0.00 0.00 31.76 4.18
196 197 3.134574 TCAATGGGCTAACAAAGACGT 57.865 42.857 0.00 0.00 31.76 4.34
199 200 0.759959 TGGGCTAACAAAGACGTCCA 59.240 50.000 13.01 0.00 31.76 4.02
202 203 2.031420 GGGCTAACAAAGACGTCCAAAC 60.031 50.000 13.01 0.00 31.76 2.93
203 204 2.614983 GGCTAACAAAGACGTCCAAACA 59.385 45.455 13.01 0.00 0.00 2.83
243 244 7.117379 GGTCCAACTTATAGACACAACAACTAC 59.883 40.741 0.00 0.00 31.99 2.73
244 245 7.117379 GTCCAACTTATAGACACAACAACTACC 59.883 40.741 0.00 0.00 0.00 3.18
258 259 3.265995 ACAACTACCCTCCGGATTTCATT 59.734 43.478 3.57 0.00 0.00 2.57
264 265 2.945668 CCCTCCGGATTTCATTGAGTTC 59.054 50.000 3.57 0.00 0.00 3.01
310 311 7.186972 AGGCAATTATCCCATGATTGTGATAT 58.813 34.615 0.00 0.00 38.20 1.63
325 327 0.034059 GATATGAGTGCCTCCACCCG 59.966 60.000 0.50 0.00 43.09 5.28
326 328 1.410850 ATATGAGTGCCTCCACCCGG 61.411 60.000 0.00 0.00 43.09 5.73
336 338 1.299648 TCCACCCGGAGCTCAAATG 59.700 57.895 17.19 7.73 35.91 2.32
366 368 3.648339 TGATCAGCAAAGTCCAAAAGC 57.352 42.857 0.00 0.00 0.00 3.51
369 371 3.883830 TCAGCAAAGTCCAAAAGCAAA 57.116 38.095 0.00 0.00 0.00 3.68
370 372 4.199432 TCAGCAAAGTCCAAAAGCAAAA 57.801 36.364 0.00 0.00 0.00 2.44
425 427 3.904136 ATTCTCGAAAGCACTGGTTTG 57.096 42.857 10.90 4.36 33.25 2.93
457 459 4.894114 ACCAATCTAATCTACCTACGCACT 59.106 41.667 0.00 0.00 0.00 4.40
459 461 5.462405 CAATCTAATCTACCTACGCACTCC 58.538 45.833 0.00 0.00 0.00 3.85
460 462 4.434545 TCTAATCTACCTACGCACTCCT 57.565 45.455 0.00 0.00 0.00 3.69
461 463 4.135306 TCTAATCTACCTACGCACTCCTG 58.865 47.826 0.00 0.00 0.00 3.86
462 464 2.730934 ATCTACCTACGCACTCCTGA 57.269 50.000 0.00 0.00 0.00 3.86
464 466 1.281287 TCTACCTACGCACTCCTGAGT 59.719 52.381 0.00 0.00 43.61 3.41
468 1510 0.453793 CTACGCACTCCTGAGTCCTG 59.546 60.000 0.00 0.00 40.20 3.86
473 1515 0.605589 CACTCCTGAGTCCTGACCAC 59.394 60.000 0.00 0.00 40.20 4.16
554 4615 1.884464 CACGCCAGTCATGATCCGG 60.884 63.158 0.00 0.00 0.00 5.14
574 4635 2.239654 GGTGATTGATGGAACCCTCTGA 59.760 50.000 0.00 0.00 0.00 3.27
582 4643 4.043310 TGATGGAACCCTCTGAAAATCAGT 59.957 41.667 7.21 0.00 44.58 3.41
799 4867 5.618640 GCATTAGCAGCCAATCAATAGCTAC 60.619 44.000 0.00 0.00 41.58 3.58
806 4874 5.859114 CAGCCAATCAATAGCTACTACGTAG 59.141 44.000 20.97 20.97 38.97 3.51
810 4878 7.308469 GCCAATCAATAGCTACTACGTAGTACT 60.308 40.741 27.51 26.85 45.11 2.73
831 4907 6.010294 ACTACATCTGTGTGTACTGTGTAC 57.990 41.667 0.00 1.33 39.39 2.90
832 4908 5.768662 ACTACATCTGTGTGTACTGTGTACT 59.231 40.000 8.94 0.00 39.39 2.73
833 4909 5.122512 ACATCTGTGTGTACTGTGTACTC 57.877 43.478 8.94 6.28 37.14 2.59
834 4910 4.827835 ACATCTGTGTGTACTGTGTACTCT 59.172 41.667 8.94 0.00 37.14 3.24
835 4911 5.048643 ACATCTGTGTGTACTGTGTACTCTC 60.049 44.000 8.94 7.07 37.14 3.20
837 4913 5.070685 TCTGTGTGTACTGTGTACTCTCAT 58.929 41.667 8.94 0.00 0.00 2.90
838 4914 5.048713 TCTGTGTGTACTGTGTACTCTCATG 60.049 44.000 8.94 0.00 0.00 3.07
839 4915 3.921021 GTGTGTACTGTGTACTCTCATGC 59.079 47.826 8.94 0.00 0.00 4.06
869 5375 1.138661 AGCAGAGATAGTGGCTGAAGC 59.861 52.381 0.00 0.00 41.14 3.86
886 5392 2.045926 CCTTGAAGGCACGGGGAG 60.046 66.667 0.00 0.00 30.14 4.30
887 5393 2.750350 CTTGAAGGCACGGGGAGT 59.250 61.111 0.00 0.00 0.00 3.85
888 5394 1.376037 CTTGAAGGCACGGGGAGTC 60.376 63.158 0.00 0.00 0.00 3.36
889 5395 3.234630 TTGAAGGCACGGGGAGTCG 62.235 63.158 0.00 0.00 0.00 4.18
890 5396 4.452733 GAAGGCACGGGGAGTCGG 62.453 72.222 0.00 0.00 0.00 4.79
909 5415 1.004918 GGACCGAATATGCCCGAGG 60.005 63.158 0.00 0.00 0.00 4.63
936 5442 6.767902 TGGAAGAAGCCTATAAATAACAGCAG 59.232 38.462 0.00 0.00 0.00 4.24
968 5475 5.213913 GCTTCGTTAGCTTTACCCTTTAC 57.786 43.478 0.00 0.00 46.77 2.01
1018 5525 4.107072 TCCATCTTCCTCCTCTGTTCAAT 58.893 43.478 0.00 0.00 0.00 2.57
1025 5532 1.929836 CTCCTCTGTTCAATAGCGCAC 59.070 52.381 11.47 0.00 0.00 5.34
1041 5551 1.011242 CACGCCACGAACACACTTG 60.011 57.895 0.00 0.00 0.00 3.16
1042 5552 2.177580 ACGCCACGAACACACTTGG 61.178 57.895 0.00 0.00 33.24 3.61
1044 5554 0.876777 CGCCACGAACACACTTGGTA 60.877 55.000 0.00 0.00 32.77 3.25
1045 5555 1.519408 GCCACGAACACACTTGGTAT 58.481 50.000 0.00 0.00 32.77 2.73
1046 5556 2.690786 GCCACGAACACACTTGGTATA 58.309 47.619 0.00 0.00 32.77 1.47
1047 5557 2.414138 GCCACGAACACACTTGGTATAC 59.586 50.000 0.00 0.00 32.77 1.47
1069 5579 3.782443 ACCGGCCGGGAGTTCATC 61.782 66.667 44.99 0.00 39.97 2.92
1070 5580 3.781307 CCGGCCGGGAGTTCATCA 61.781 66.667 37.42 0.00 38.47 3.07
1071 5581 2.505982 CGGCCGGGAGTTCATCAT 59.494 61.111 20.10 0.00 0.00 2.45
1072 5582 1.745890 CGGCCGGGAGTTCATCATA 59.254 57.895 20.10 0.00 0.00 2.15
1073 5583 0.600255 CGGCCGGGAGTTCATCATAC 60.600 60.000 20.10 0.00 0.00 2.39
1083 5593 1.933853 GTTCATCATACAGACACCGCC 59.066 52.381 0.00 0.00 0.00 6.13
1156 5675 4.155733 CCGCCGGCCTGATACACA 62.156 66.667 23.46 0.00 0.00 3.72
1163 5682 0.597637 GGCCTGATACACATCGTCGG 60.598 60.000 0.00 0.00 33.51 4.79
1224 5749 0.407139 AAGATGGTGGGCAAGAGCTT 59.593 50.000 0.00 0.00 41.70 3.74
1506 6062 3.550233 GCATGTGCTTAGATGCTTCCATG 60.550 47.826 0.00 8.80 41.52 3.66
1516 6072 1.179152 TGCTTCCATGCCATCTGTTG 58.821 50.000 0.00 0.00 0.00 3.33
1559 6126 1.632422 AATTTAGTCGCACGTACGGG 58.368 50.000 21.06 18.06 0.00 5.28
1576 6143 2.048222 GTGCAGCGTGCCTGAGTA 60.048 61.111 7.38 0.00 44.23 2.59
1624 6395 5.967674 GGATCATGTGTCGATCAATTCAAAC 59.032 40.000 0.00 0.00 40.93 2.93
1625 6396 6.183360 GGATCATGTGTCGATCAATTCAAACT 60.183 38.462 0.00 0.00 40.93 2.66
1626 6397 7.011389 GGATCATGTGTCGATCAATTCAAACTA 59.989 37.037 0.00 0.00 40.93 2.24
1633 6404 6.752351 TGTCGATCAATTCAAACTAGTAGCTC 59.248 38.462 0.00 0.00 0.00 4.09
1650 6421 7.035840 AGTAGCTCGATCGGTTCTTAATTAA 57.964 36.000 16.41 0.00 0.00 1.40
1651 6422 7.659186 AGTAGCTCGATCGGTTCTTAATTAAT 58.341 34.615 16.41 0.00 0.00 1.40
1652 6423 8.142551 AGTAGCTCGATCGGTTCTTAATTAATT 58.857 33.333 16.41 5.89 0.00 1.40
1653 6424 9.403110 GTAGCTCGATCGGTTCTTAATTAATTA 57.597 33.333 16.41 3.71 0.00 1.40
1654 6425 8.295569 AGCTCGATCGGTTCTTAATTAATTAC 57.704 34.615 16.41 0.00 0.00 1.89
1721 6510 3.059325 GGCACTCGTAATCAAGATGCATC 60.059 47.826 19.37 19.37 33.24 3.91
1819 6608 2.604174 GGTGGTTTGCACGTCTCCG 61.604 63.158 0.00 0.00 40.83 4.63
1824 6613 1.058404 GTTTGCACGTCTCCGTCTAC 58.942 55.000 0.00 0.00 46.28 2.59
1902 6692 3.153024 GTCAGCAGGACGCCAATAA 57.847 52.632 0.00 0.00 44.04 1.40
1964 6756 6.031751 AGGAACTAACAACATGTCTCTCTC 57.968 41.667 0.00 0.00 36.02 3.20
1977 6769 0.669932 CTCTCTCTGCGTGCTTGCTT 60.670 55.000 2.56 0.00 35.36 3.91
1978 6770 0.603065 TCTCTCTGCGTGCTTGCTTA 59.397 50.000 2.56 0.00 35.36 3.09
1979 6771 1.000843 TCTCTCTGCGTGCTTGCTTAA 59.999 47.619 2.56 0.00 35.36 1.85
1988 6780 4.201871 TGCGTGCTTGCTTAATAACCATAC 60.202 41.667 2.56 0.00 35.36 2.39
2030 6822 3.074412 AGAAAGGCCTAACATTGTGACG 58.926 45.455 5.16 0.00 0.00 4.35
2039 6831 5.756347 GCCTAACATTGTGACGGATATTACA 59.244 40.000 0.00 0.00 0.00 2.41
2040 6832 6.292703 GCCTAACATTGTGACGGATATTACAC 60.293 42.308 0.00 0.00 0.00 2.90
2043 6835 5.730550 ACATTGTGACGGATATTACACACT 58.269 37.500 0.00 0.00 41.78 3.55
2143 7223 4.105553 CTGGCTGGCTGGCTGCTA 62.106 66.667 27.06 22.09 42.39 3.49
2195 7277 2.733026 GGATTCTGTTGTGCAAACATGC 59.267 45.455 12.68 0.00 0.00 4.06
2228 7353 0.782384 CGCTCGCGTGTTTTCTACTT 59.218 50.000 5.77 0.00 34.35 2.24
2280 7415 3.253188 ACATGCGAAAAAGCTTAGAGCAA 59.747 39.130 18.16 6.75 45.56 3.91
2440 7629 0.752658 ACCAAACCTCTGCTTTTGCC 59.247 50.000 0.00 0.00 46.87 4.52
2447 7636 1.321474 CTCTGCTTTTGCCAGAACCA 58.679 50.000 0.00 0.00 46.87 3.67
2533 7728 1.005294 GGATGTACGTGTCGTGCGTT 61.005 55.000 0.00 0.00 44.75 4.84
2554 7795 0.666274 TCATCACTTCGTCGTGCCAC 60.666 55.000 0.00 0.00 34.92 5.01
2688 7931 2.190841 CGGTGCACGGGGAAAAGTT 61.191 57.895 16.16 0.00 39.42 2.66
2691 7934 0.030235 GTGCACGGGGAAAAGTTGAC 59.970 55.000 0.00 0.00 0.00 3.18
2698 7941 1.200020 GGGGAAAAGTTGACAGATGCG 59.800 52.381 0.00 0.00 0.00 4.73
2844 8153 4.082463 TCGGTTTGGCCATTTCACTATTTC 60.082 41.667 6.09 0.00 36.97 2.17
2847 8156 5.279456 GGTTTGGCCATTTCACTATTTCTGT 60.279 40.000 6.09 0.00 37.17 3.41
2848 8157 6.223120 GTTTGGCCATTTCACTATTTCTGTT 58.777 36.000 6.09 0.00 0.00 3.16
2853 8162 6.808704 GGCCATTTCACTATTTCTGTTCTTTC 59.191 38.462 0.00 0.00 0.00 2.62
2854 8163 7.370383 GCCATTTCACTATTTCTGTTCTTTCA 58.630 34.615 0.00 0.00 0.00 2.69
2868 8177 8.292444 TCTGTTCTTTCATTTCAAAAAGAGGA 57.708 30.769 0.00 0.00 41.22 3.71
2869 8178 8.917088 TCTGTTCTTTCATTTCAAAAAGAGGAT 58.083 29.630 0.00 0.00 41.22 3.24
2870 8179 8.876275 TGTTCTTTCATTTCAAAAAGAGGATG 57.124 30.769 0.00 0.00 41.22 3.51
2927 8238 8.618677 TGCAGCATTTTTGTGATGATTTTAAAA 58.381 25.926 2.51 2.51 37.70 1.52
2940 8251 8.719648 TGATGATTTTAAAATGCACATTCCAAC 58.280 29.630 17.98 6.71 0.00 3.77
2981 8292 0.311790 AAAACTGCCGCACATGACTG 59.688 50.000 0.00 0.00 0.00 3.51
3011 8322 8.562892 CAAGAGCAAAAAGAAGAAGAGAACATA 58.437 33.333 0.00 0.00 0.00 2.29
3066 8377 2.472414 TAGCCGGCCAACCAAATCGT 62.472 55.000 26.15 1.43 34.57 3.73
3069 8380 1.644786 CCGGCCAACCAAATCGTCTC 61.645 60.000 2.24 0.00 34.57 3.36
3070 8381 0.953471 CGGCCAACCAAATCGTCTCA 60.953 55.000 2.24 0.00 34.57 3.27
3072 8383 1.818674 GGCCAACCAAATCGTCTCAAT 59.181 47.619 0.00 0.00 35.26 2.57
3076 8387 5.465935 GCCAACCAAATCGTCTCAATAAAA 58.534 37.500 0.00 0.00 0.00 1.52
3077 8388 6.099341 GCCAACCAAATCGTCTCAATAAAAT 58.901 36.000 0.00 0.00 0.00 1.82
3093 8404 8.884124 TCAATAAAATCCAAGAGACCATCTTT 57.116 30.769 0.00 0.00 46.49 2.52
3097 8408 7.787623 AAAATCCAAGAGACCATCTTTCATT 57.212 32.000 0.00 0.00 46.49 2.57
3137 8448 5.130975 TCATTTCACTATCTAGGTGTGGCAT 59.869 40.000 0.00 2.45 36.25 4.40
3214 8526 8.417273 AGTTGGTAAAATTGGCTATTAACACT 57.583 30.769 0.00 0.00 0.00 3.55
3216 8528 9.135843 GTTGGTAAAATTGGCTATTAACACTTC 57.864 33.333 0.00 0.00 0.00 3.01
3218 8530 9.742144 TGGTAAAATTGGCTATTAACACTTCTA 57.258 29.630 0.00 0.00 0.00 2.10
3220 8532 9.717892 GTAAAATTGGCTATTAACACTTCTAGC 57.282 33.333 0.00 0.00 36.66 3.42
3221 8533 8.581253 AAAATTGGCTATTAACACTTCTAGCT 57.419 30.769 0.00 0.00 37.37 3.32
3224 8536 9.853177 AATTGGCTATTAACACTTCTAGCTATT 57.147 29.630 0.00 0.00 37.37 1.73
3229 8541 9.974980 GCTATTAACACTTCTAGCTATTCTTCT 57.025 33.333 0.00 0.00 34.98 2.85
3235 8547 8.177119 ACACTTCTAGCTATTCTTCTCTATGG 57.823 38.462 0.00 0.00 0.00 2.74
3236 8548 7.782644 ACACTTCTAGCTATTCTTCTCTATGGT 59.217 37.037 0.00 0.00 0.00 3.55
3237 8549 8.081633 CACTTCTAGCTATTCTTCTCTATGGTG 58.918 40.741 0.00 0.00 0.00 4.17
3274 8763 7.151308 TCTTGTTTATTGCAACCAATACCAAG 58.849 34.615 0.00 17.99 43.86 3.61
3293 8782 1.661341 GCATTCGCTCACCTCTTCAT 58.339 50.000 0.00 0.00 34.30 2.57
3301 8790 2.676839 GCTCACCTCTTCATCATGTGTG 59.323 50.000 0.00 0.00 0.00 3.82
3318 8807 3.187637 TGTGTGTGAGCCGCTTTATTAAC 59.812 43.478 0.00 0.00 0.00 2.01
3319 8808 2.745281 TGTGTGAGCCGCTTTATTAACC 59.255 45.455 0.00 0.00 0.00 2.85
3322 8811 2.030091 GTGAGCCGCTTTATTAACCGTC 59.970 50.000 0.00 0.00 0.00 4.79
3467 9017 9.724839 TGATACTTTTTCCTGAAAAACGTAAAG 57.275 29.630 19.34 11.46 43.08 1.85
3468 9018 9.726232 GATACTTTTTCCTGAAAAACGTAAAGT 57.274 29.630 19.34 14.79 43.08 2.66
3572 9123 8.451748 GTTGTCTTTAGTATTCAGGGACATTTC 58.548 37.037 0.00 0.00 33.30 2.17
3610 9161 5.103687 AGGGCTATATTCCTCATGGATTGA 58.896 41.667 0.00 0.00 42.81 2.57
3616 9167 3.354948 TTCCTCATGGATTGACTGTGG 57.645 47.619 0.00 0.00 42.81 4.17
3617 9168 2.550175 TCCTCATGGATTGACTGTGGA 58.450 47.619 0.00 0.00 37.46 4.02
3618 9169 2.502947 TCCTCATGGATTGACTGTGGAG 59.497 50.000 0.00 0.00 37.46 3.86
3841 9626 0.393537 AGCTCGAGCCTGGAATTTGG 60.394 55.000 32.94 0.00 43.38 3.28
3846 9631 3.226777 TCGAGCCTGGAATTTGGAAAAA 58.773 40.909 0.00 0.00 0.00 1.94
3921 9707 9.944079 ATATCTATGGATGTATACTACTTGCCT 57.056 33.333 4.17 0.00 33.71 4.75
3966 9782 4.853924 ACTTGCCTGTAAAGTTTCATGG 57.146 40.909 0.00 0.00 34.16 3.66
3993 9809 7.908082 TGAAATACATTTTTATGCGAGCTACAC 59.092 33.333 0.00 0.00 0.00 2.90
4189 10011 9.778741 AAGGGTAGAAGGAAAAATGAAAATTTC 57.221 29.630 0.00 0.00 35.33 2.17
4195 10017 5.620206 AGGAAAAATGAAAATTTCGGGCTT 58.380 33.333 0.97 0.00 36.60 4.35
4229 10051 1.891150 AGCCAAAAAGCCTCACTCATG 59.109 47.619 0.00 0.00 0.00 3.07
4348 10400 5.544562 GTGAAGCTAGATTAATAGGAGGGGT 59.455 44.000 0.00 0.00 0.00 4.95
4351 10403 7.234988 TGAAGCTAGATTAATAGGAGGGGTTAC 59.765 40.741 0.00 0.00 0.00 2.50
4360 10412 8.641498 TTAATAGGAGGGGTTACATTAAAGGA 57.359 34.615 0.00 0.00 0.00 3.36
4364 10416 6.458784 AGGAGGGGTTACATTAAAGGAGATA 58.541 40.000 0.00 0.00 0.00 1.98
4370 10422 7.451566 GGGGTTACATTAAAGGAGATAATGCAT 59.548 37.037 0.00 0.00 42.05 3.96
4383 10435 1.708341 AATGCATATGTTGGAGGGGC 58.292 50.000 0.00 0.00 0.00 5.80
4411 10463 5.476091 AGAGTTTGAGAGTTCAGGGTTAG 57.524 43.478 0.00 0.00 34.15 2.34
4440 10492 0.923358 TGGGTGGTCTGTGGACTTTT 59.077 50.000 0.00 0.00 41.82 2.27
4442 10494 1.409661 GGGTGGTCTGTGGACTTTTGT 60.410 52.381 0.00 0.00 41.82 2.83
4460 10512 1.000955 TGTCTCGAGAGGAACAAAGGC 59.999 52.381 17.22 0.00 0.00 4.35
4466 10518 1.072331 GAGAGGAACAAAGGCAGACCA 59.928 52.381 0.00 0.00 39.06 4.02
4469 10521 3.054802 AGAGGAACAAAGGCAGACCATAG 60.055 47.826 0.00 0.00 39.06 2.23
4471 10523 2.436417 GAACAAAGGCAGACCATAGCA 58.564 47.619 0.00 0.00 39.06 3.49
4473 10525 3.091633 ACAAAGGCAGACCATAGCAAT 57.908 42.857 0.00 0.00 39.06 3.56
4504 10556 5.567037 TGCTTATGCTTATGTGGGTAGAT 57.433 39.130 1.96 0.00 40.48 1.98
4505 10557 6.680148 TGCTTATGCTTATGTGGGTAGATA 57.320 37.500 1.96 0.00 40.48 1.98
4513 10565 1.268066 TGTGGGTAGATAACACCGCA 58.732 50.000 0.00 0.00 36.90 5.69
4533 10585 2.033299 CAGGTTGTATAAGGGCAATGCG 59.967 50.000 0.00 0.00 0.00 4.73
4551 10603 1.005975 GCGTATTGTGTCGATGTGAGC 60.006 52.381 0.00 0.00 0.00 4.26
4571 10623 2.989253 CCGGGGCACAAGGGAAAC 60.989 66.667 0.00 0.00 0.00 2.78
4592 10644 5.734855 ACCACAATGACATAATAGTTCGC 57.265 39.130 0.00 0.00 0.00 4.70
4671 10861 6.202516 ACCATTGAACAAGTTTTCTTTCGA 57.797 33.333 0.00 0.00 38.17 3.71
4687 10877 8.614994 TTTCTTTCGAAAGATGAAAAGTGAAC 57.385 30.769 34.45 0.00 43.92 3.18
4703 10893 5.767816 AGTGAACAAGGTTTGAATGGTAC 57.232 39.130 0.00 0.00 0.00 3.34
4756 11225 0.747852 TCCACACAGAGTGCGTGTAA 59.252 50.000 0.00 0.00 45.63 2.41
4773 11242 2.129607 GTAACGTGTGATGACGGTGTT 58.870 47.619 0.00 0.00 40.21 3.32
4775 11244 0.934496 ACGTGTGATGACGGTGTTTG 59.066 50.000 0.00 0.00 43.84 2.93
4776 11245 1.213491 CGTGTGATGACGGTGTTTGA 58.787 50.000 0.00 0.00 35.65 2.69
4777 11246 1.595328 CGTGTGATGACGGTGTTTGAA 59.405 47.619 0.00 0.00 35.65 2.69
4778 11247 2.223144 CGTGTGATGACGGTGTTTGAAT 59.777 45.455 0.00 0.00 35.65 2.57
4779 11248 3.303725 CGTGTGATGACGGTGTTTGAATT 60.304 43.478 0.00 0.00 35.65 2.17
4780 11249 4.606961 GTGTGATGACGGTGTTTGAATTT 58.393 39.130 0.00 0.00 0.00 1.82
4783 11252 5.040635 GTGATGACGGTGTTTGAATTTTGT 58.959 37.500 0.00 0.00 0.00 2.83
4784 11253 5.518487 GTGATGACGGTGTTTGAATTTTGTT 59.482 36.000 0.00 0.00 0.00 2.83
4785 11254 5.746245 TGATGACGGTGTTTGAATTTTGTTC 59.254 36.000 0.00 0.00 0.00 3.18
4787 11256 4.158764 TGACGGTGTTTGAATTTTGTTCCT 59.841 37.500 0.00 0.00 0.00 3.36
4789 11258 5.106442 ACGGTGTTTGAATTTTGTTCCTTC 58.894 37.500 0.00 0.00 0.00 3.46
4793 11262 6.372937 GGTGTTTGAATTTTGTTCCTTCCAAA 59.627 34.615 0.00 0.00 0.00 3.28
4818 11287 7.476540 AAAAGAGTTTTCCCCGCTTTATATT 57.523 32.000 0.00 0.00 0.00 1.28
4823 11292 9.856162 AGAGTTTTCCCCGCTTTATATTATAAA 57.144 29.630 8.26 8.26 0.00 1.40
4877 11674 9.834628 ATGTAATGTTCCAAGTAAAATAACACG 57.165 29.630 0.00 0.00 33.27 4.49
4879 11676 9.537848 GTAATGTTCCAAGTAAAATAACACGAG 57.462 33.333 0.00 0.00 33.27 4.18
4880 11677 6.548441 TGTTCCAAGTAAAATAACACGAGG 57.452 37.500 0.00 0.00 0.00 4.63
4881 11678 6.056884 TGTTCCAAGTAAAATAACACGAGGT 58.943 36.000 0.00 0.00 0.00 3.85
4883 11680 5.856156 TCCAAGTAAAATAACACGAGGTGA 58.144 37.500 2.29 0.00 36.96 4.02
4884 11681 5.697633 TCCAAGTAAAATAACACGAGGTGAC 59.302 40.000 2.29 0.00 36.96 3.67
4887 11684 1.435577 AAATAACACGAGGTGACGCC 58.564 50.000 2.29 0.00 36.96 5.68
4896 11699 2.282180 GGTGACGCCATGGGTTGT 60.282 61.111 15.13 0.00 37.17 3.32
4937 11740 2.029666 GCGCTGGAGACACTGTGT 59.970 61.111 14.23 14.23 35.60 3.72
5162 11965 2.656055 GCCAATTTCCCGCTGCAA 59.344 55.556 0.00 0.00 0.00 4.08
5249 12052 2.051638 CGTCGTGCTCAACTACGTG 58.948 57.895 0.00 0.00 41.62 4.49
5402 12205 1.968540 GCTCGCCTTCAGCAACCTT 60.969 57.895 0.00 0.00 44.04 3.50
5549 12385 1.950216 TGTGTGTGTGTGTGTGTTGTT 59.050 42.857 0.00 0.00 0.00 2.83
5797 12859 3.494048 GCAGCAGTGAGGTATAATGCTCT 60.494 47.826 0.00 0.00 45.03 4.09
5831 12893 2.254546 TAGCACCACCAACACAAGAG 57.745 50.000 0.00 0.00 0.00 2.85
5832 12894 0.546122 AGCACCACCAACACAAGAGA 59.454 50.000 0.00 0.00 0.00 3.10
5839 12923 2.797156 CACCAACACAAGAGAAGACGAG 59.203 50.000 0.00 0.00 0.00 4.18
5852 13032 5.830457 AGAGAAGACGAGATCCATCAATGTA 59.170 40.000 0.00 0.00 0.00 2.29
6014 13209 4.361971 TCGCCTGGAGGACCGAGT 62.362 66.667 0.00 0.00 39.42 4.18
6073 13270 1.821332 GGCTGCAAAGCTCGGCTAT 60.821 57.895 10.47 0.00 38.25 2.97
6150 13347 0.034896 CACCACTACACCCACCAGTC 59.965 60.000 0.00 0.00 0.00 3.51
6160 13357 2.819608 CACCCACCAGTCACCAAATTAG 59.180 50.000 0.00 0.00 0.00 1.73
6175 13372 5.130311 ACCAAATTAGGCCATTATTCCCAAC 59.870 40.000 5.01 0.00 0.00 3.77
6178 13375 2.818751 AGGCCATTATTCCCAACGAA 57.181 45.000 5.01 0.00 34.14 3.85
6196 13393 6.455646 CCAACGAAAATAGGAAGATCTGAACG 60.456 42.308 0.00 0.00 0.00 3.95
6198 13395 6.037098 ACGAAAATAGGAAGATCTGAACGAG 58.963 40.000 0.00 0.00 0.00 4.18
6204 13401 8.430801 AATAGGAAGATCTGAACGAGAAATTG 57.569 34.615 0.00 0.00 33.12 2.32
6431 13628 4.950475 TGGATGCATAATTACAAAACGGGA 59.050 37.500 0.00 0.00 0.00 5.14
6433 13630 6.097554 TGGATGCATAATTACAAAACGGGAAT 59.902 34.615 0.00 0.00 0.00 3.01
6451 13650 4.202326 GGGAATTCGGATTCTAACCTGCTA 60.202 45.833 15.98 0.00 41.18 3.49
6569 13781 1.142870 CCAAGTGGGAGAAACAGGTGA 59.857 52.381 0.00 0.00 40.01 4.02
6649 13885 2.123342 CGATCGAAGTTGAGCAGATCC 58.877 52.381 10.26 0.00 35.56 3.36
6762 14027 2.201817 GCGACGAACGGTAGCATAC 58.798 57.895 0.00 0.00 45.42 2.39
6784 14049 6.760440 ACATAGATGATCAGATGGTTCCTT 57.240 37.500 15.62 0.00 0.00 3.36
6803 14068 3.697542 CCTTCATGCAGATTGGACAATGA 59.302 43.478 1.69 0.00 0.00 2.57
6838 14106 9.342308 ACATGGAAAACACATATAGGTAGATTG 57.658 33.333 0.00 0.00 0.00 2.67
6877 14150 2.428530 TCCACAGACTGAGATTGATCCG 59.571 50.000 10.08 0.00 0.00 4.18
6892 14167 1.262640 ATCCGGTGTACCTCGGCTTT 61.263 55.000 16.25 4.39 45.31 3.51
6953 14228 2.807967 CGCTCAAAACCACTCATCTGAA 59.192 45.455 0.00 0.00 0.00 3.02
7130 14412 3.680490 TCGGGCAATGAAATGTTGTCTA 58.320 40.909 0.00 0.00 32.03 2.59
7832 16721 2.545731 GTCCTGAAAATCGCCTCTCTC 58.454 52.381 0.00 0.00 0.00 3.20
7833 16722 1.135139 TCCTGAAAATCGCCTCTCTCG 59.865 52.381 0.00 0.00 0.00 4.04
7834 16723 1.565305 CTGAAAATCGCCTCTCTCGG 58.435 55.000 0.00 0.00 0.00 4.63
7835 16724 0.460284 TGAAAATCGCCTCTCTCGGC 60.460 55.000 0.00 0.00 46.68 5.54
7877 16766 4.640647 GGCCTTTTAGGATCTGTTTCGATT 59.359 41.667 0.00 0.00 37.67 3.34
7878 16767 5.449177 GGCCTTTTAGGATCTGTTTCGATTG 60.449 44.000 0.00 0.00 37.67 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 6.601217 ACACATTTGCATTTACCAACCTTTTT 59.399 30.769 0.00 0.00 0.00 1.94
13 14 6.038050 CACACATTTGCATTTACCAACCTTTT 59.962 34.615 0.00 0.00 0.00 2.27
14 15 5.526846 CACACATTTGCATTTACCAACCTTT 59.473 36.000 0.00 0.00 0.00 3.11
15 16 5.055812 CACACATTTGCATTTACCAACCTT 58.944 37.500 0.00 0.00 0.00 3.50
16 17 4.502950 CCACACATTTGCATTTACCAACCT 60.503 41.667 0.00 0.00 0.00 3.50
17 18 3.745458 CCACACATTTGCATTTACCAACC 59.255 43.478 0.00 0.00 0.00 3.77
18 19 4.210955 CACCACACATTTGCATTTACCAAC 59.789 41.667 0.00 0.00 0.00 3.77
19 20 4.100035 TCACCACACATTTGCATTTACCAA 59.900 37.500 0.00 0.00 0.00 3.67
20 21 3.638627 TCACCACACATTTGCATTTACCA 59.361 39.130 0.00 0.00 0.00 3.25
21 22 4.236935 CTCACCACACATTTGCATTTACC 58.763 43.478 0.00 0.00 0.00 2.85
22 23 4.870363 ACTCACCACACATTTGCATTTAC 58.130 39.130 0.00 0.00 0.00 2.01
23 24 5.335583 GCTACTCACCACACATTTGCATTTA 60.336 40.000 0.00 0.00 0.00 1.40
24 25 4.559300 GCTACTCACCACACATTTGCATTT 60.559 41.667 0.00 0.00 0.00 2.32
25 26 3.057315 GCTACTCACCACACATTTGCATT 60.057 43.478 0.00 0.00 0.00 3.56
26 27 2.489329 GCTACTCACCACACATTTGCAT 59.511 45.455 0.00 0.00 0.00 3.96
27 28 1.879380 GCTACTCACCACACATTTGCA 59.121 47.619 0.00 0.00 0.00 4.08
28 29 2.154462 AGCTACTCACCACACATTTGC 58.846 47.619 0.00 0.00 0.00 3.68
29 30 3.935203 CCTAGCTACTCACCACACATTTG 59.065 47.826 0.00 0.00 0.00 2.32
30 31 3.838317 TCCTAGCTACTCACCACACATTT 59.162 43.478 0.00 0.00 0.00 2.32
31 32 3.195825 GTCCTAGCTACTCACCACACATT 59.804 47.826 0.00 0.00 0.00 2.71
32 33 2.761208 GTCCTAGCTACTCACCACACAT 59.239 50.000 0.00 0.00 0.00 3.21
33 34 2.168496 GTCCTAGCTACTCACCACACA 58.832 52.381 0.00 0.00 0.00 3.72
34 35 2.168496 TGTCCTAGCTACTCACCACAC 58.832 52.381 0.00 0.00 0.00 3.82
35 36 2.597578 TGTCCTAGCTACTCACCACA 57.402 50.000 0.00 0.00 0.00 4.17
36 37 3.090037 TCTTGTCCTAGCTACTCACCAC 58.910 50.000 0.00 0.00 0.00 4.16
37 38 3.451402 TCTTGTCCTAGCTACTCACCA 57.549 47.619 0.00 0.00 0.00 4.17
38 39 3.427773 CGTTCTTGTCCTAGCTACTCACC 60.428 52.174 0.00 0.00 0.00 4.02
39 40 3.760537 CGTTCTTGTCCTAGCTACTCAC 58.239 50.000 0.00 0.00 0.00 3.51
40 41 2.163815 GCGTTCTTGTCCTAGCTACTCA 59.836 50.000 0.00 0.00 0.00 3.41
41 42 2.163815 TGCGTTCTTGTCCTAGCTACTC 59.836 50.000 0.00 0.00 0.00 2.59
42 43 2.164624 CTGCGTTCTTGTCCTAGCTACT 59.835 50.000 0.00 0.00 0.00 2.57
43 44 2.163815 TCTGCGTTCTTGTCCTAGCTAC 59.836 50.000 0.00 0.00 0.00 3.58
44 45 2.163815 GTCTGCGTTCTTGTCCTAGCTA 59.836 50.000 0.00 0.00 0.00 3.32
45 46 1.067495 GTCTGCGTTCTTGTCCTAGCT 60.067 52.381 0.00 0.00 0.00 3.32
46 47 1.336887 TGTCTGCGTTCTTGTCCTAGC 60.337 52.381 0.00 0.00 0.00 3.42
47 48 2.600731 CTGTCTGCGTTCTTGTCCTAG 58.399 52.381 0.00 0.00 0.00 3.02
48 49 1.272490 CCTGTCTGCGTTCTTGTCCTA 59.728 52.381 0.00 0.00 0.00 2.94
49 50 0.034059 CCTGTCTGCGTTCTTGTCCT 59.966 55.000 0.00 0.00 0.00 3.85
50 51 1.569479 GCCTGTCTGCGTTCTTGTCC 61.569 60.000 0.00 0.00 0.00 4.02
51 52 0.880278 TGCCTGTCTGCGTTCTTGTC 60.880 55.000 0.00 0.00 0.00 3.18
52 53 0.882042 CTGCCTGTCTGCGTTCTTGT 60.882 55.000 0.00 0.00 0.00 3.16
53 54 1.864862 CTGCCTGTCTGCGTTCTTG 59.135 57.895 0.00 0.00 0.00 3.02
54 55 1.963338 GCTGCCTGTCTGCGTTCTT 60.963 57.895 0.00 0.00 0.00 2.52
55 56 2.358003 GCTGCCTGTCTGCGTTCT 60.358 61.111 0.00 0.00 0.00 3.01
60 61 4.687215 TCACCGCTGCCTGTCTGC 62.687 66.667 0.00 0.00 36.43 4.26
61 62 2.740055 GTCACCGCTGCCTGTCTG 60.740 66.667 0.00 0.00 0.00 3.51
62 63 2.587247 ATGTCACCGCTGCCTGTCT 61.587 57.895 0.00 0.00 0.00 3.41
63 64 2.046892 ATGTCACCGCTGCCTGTC 60.047 61.111 0.00 0.00 0.00 3.51
64 65 2.359107 CATGTCACCGCTGCCTGT 60.359 61.111 0.00 0.00 0.00 4.00
65 66 3.129502 CCATGTCACCGCTGCCTG 61.130 66.667 0.00 0.00 0.00 4.85
66 67 4.415150 CCCATGTCACCGCTGCCT 62.415 66.667 0.00 0.00 0.00 4.75
67 68 4.408821 TCCCATGTCACCGCTGCC 62.409 66.667 0.00 0.00 0.00 4.85
68 69 2.599645 ATCTCCCATGTCACCGCTGC 62.600 60.000 0.00 0.00 0.00 5.25
69 70 0.107508 AATCTCCCATGTCACCGCTG 60.108 55.000 0.00 0.00 0.00 5.18
70 71 0.107508 CAATCTCCCATGTCACCGCT 60.108 55.000 0.00 0.00 0.00 5.52
71 72 0.107703 TCAATCTCCCATGTCACCGC 60.108 55.000 0.00 0.00 0.00 5.68
72 73 1.066215 TGTCAATCTCCCATGTCACCG 60.066 52.381 0.00 0.00 0.00 4.94
73 74 2.237143 TCTGTCAATCTCCCATGTCACC 59.763 50.000 0.00 0.00 0.00 4.02
74 75 3.616956 TCTGTCAATCTCCCATGTCAC 57.383 47.619 0.00 0.00 0.00 3.67
75 76 3.327464 TGTTCTGTCAATCTCCCATGTCA 59.673 43.478 0.00 0.00 0.00 3.58
76 77 3.942829 TGTTCTGTCAATCTCCCATGTC 58.057 45.455 0.00 0.00 0.00 3.06
77 78 4.371624 TTGTTCTGTCAATCTCCCATGT 57.628 40.909 0.00 0.00 0.00 3.21
78 79 5.647589 CATTTGTTCTGTCAATCTCCCATG 58.352 41.667 0.00 0.00 0.00 3.66
79 80 4.159135 GCATTTGTTCTGTCAATCTCCCAT 59.841 41.667 0.00 0.00 0.00 4.00
80 81 3.507233 GCATTTGTTCTGTCAATCTCCCA 59.493 43.478 0.00 0.00 0.00 4.37
81 82 3.507233 TGCATTTGTTCTGTCAATCTCCC 59.493 43.478 0.00 0.00 0.00 4.30
82 83 4.771590 TGCATTTGTTCTGTCAATCTCC 57.228 40.909 0.00 0.00 0.00 3.71
83 84 5.338365 GGATGCATTTGTTCTGTCAATCTC 58.662 41.667 0.00 0.00 0.00 2.75
84 85 4.142534 CGGATGCATTTGTTCTGTCAATCT 60.143 41.667 0.00 0.00 0.00 2.40
85 86 4.100529 CGGATGCATTTGTTCTGTCAATC 58.899 43.478 0.00 0.00 0.00 2.67
86 87 3.758023 TCGGATGCATTTGTTCTGTCAAT 59.242 39.130 0.00 0.00 0.00 2.57
87 88 3.145286 TCGGATGCATTTGTTCTGTCAA 58.855 40.909 0.00 0.00 0.00 3.18
88 89 2.777094 TCGGATGCATTTGTTCTGTCA 58.223 42.857 0.00 0.00 0.00 3.58
89 90 3.058293 TGTTCGGATGCATTTGTTCTGTC 60.058 43.478 0.00 0.00 0.00 3.51
90 91 2.884012 TGTTCGGATGCATTTGTTCTGT 59.116 40.909 0.00 0.00 0.00 3.41
91 92 3.557577 TGTTCGGATGCATTTGTTCTG 57.442 42.857 0.00 0.00 0.00 3.02
92 93 4.582701 TTTGTTCGGATGCATTTGTTCT 57.417 36.364 0.00 0.00 0.00 3.01
93 94 5.234116 AGTTTTTGTTCGGATGCATTTGTTC 59.766 36.000 0.00 0.00 0.00 3.18
94 95 5.115480 AGTTTTTGTTCGGATGCATTTGTT 58.885 33.333 0.00 0.00 0.00 2.83
95 96 4.692228 AGTTTTTGTTCGGATGCATTTGT 58.308 34.783 0.00 0.00 0.00 2.83
96 97 4.984161 AGAGTTTTTGTTCGGATGCATTTG 59.016 37.500 0.00 0.00 0.00 2.32
97 98 5.200368 AGAGTTTTTGTTCGGATGCATTT 57.800 34.783 0.00 0.00 0.00 2.32
98 99 4.853924 AGAGTTTTTGTTCGGATGCATT 57.146 36.364 0.00 0.00 0.00 3.56
99 100 4.278170 TCAAGAGTTTTTGTTCGGATGCAT 59.722 37.500 0.00 0.00 0.00 3.96
100 101 3.629855 TCAAGAGTTTTTGTTCGGATGCA 59.370 39.130 0.00 0.00 0.00 3.96
101 102 4.223320 TCAAGAGTTTTTGTTCGGATGC 57.777 40.909 0.00 0.00 0.00 3.91
102 103 6.346040 GCAATTCAAGAGTTTTTGTTCGGATG 60.346 38.462 0.00 0.00 0.00 3.51
103 104 5.691754 GCAATTCAAGAGTTTTTGTTCGGAT 59.308 36.000 0.00 0.00 0.00 4.18
104 105 5.040635 GCAATTCAAGAGTTTTTGTTCGGA 58.959 37.500 0.00 0.00 0.00 4.55
105 106 4.803088 TGCAATTCAAGAGTTTTTGTTCGG 59.197 37.500 0.00 0.00 0.00 4.30
106 107 5.516339 ACTGCAATTCAAGAGTTTTTGTTCG 59.484 36.000 0.00 0.00 0.00 3.95
107 108 6.019559 GGACTGCAATTCAAGAGTTTTTGTTC 60.020 38.462 0.00 0.00 0.00 3.18
108 109 5.812127 GGACTGCAATTCAAGAGTTTTTGTT 59.188 36.000 0.00 0.00 0.00 2.83
116 117 5.381174 TGAAATGGACTGCAATTCAAGAG 57.619 39.130 0.00 0.00 0.00 2.85
127 128 4.196626 ACCAATGCATTGAAATGGACTG 57.803 40.909 35.47 19.69 39.60 3.51
159 160 4.322877 CCATTGAATTGAACTGGGATGCAA 60.323 41.667 0.00 0.00 0.00 4.08
169 170 6.366061 GTCTTTGTTAGCCCATTGAATTGAAC 59.634 38.462 0.00 0.00 0.00 3.18
175 176 3.482436 ACGTCTTTGTTAGCCCATTGAA 58.518 40.909 0.00 0.00 0.00 2.69
180 181 0.759959 TGGACGTCTTTGTTAGCCCA 59.240 50.000 16.46 0.00 0.00 5.36
216 217 5.554437 TGTTGTGTCTATAAGTTGGACCA 57.446 39.130 0.00 0.00 0.00 4.02
228 229 2.559668 CGGAGGGTAGTTGTTGTGTCTA 59.440 50.000 0.00 0.00 0.00 2.59
258 259 5.947228 GTGATTTCACTTCATGGAACTCA 57.053 39.130 3.45 0.00 43.25 3.41
343 345 5.106038 TGCTTTTGGACTTTGCTGATCATAG 60.106 40.000 0.00 0.00 0.00 2.23
413 415 4.620567 GGTTGAAACTTCAAACCAGTGCTT 60.621 41.667 8.74 0.00 46.52 3.91
415 417 3.186909 GGTTGAAACTTCAAACCAGTGC 58.813 45.455 8.74 0.00 46.52 4.40
425 427 8.794335 AGGTAGATTAGATTGGTTGAAACTTC 57.206 34.615 0.00 0.00 0.00 3.01
457 459 0.105709 TGTGTGGTCAGGACTCAGGA 60.106 55.000 0.00 0.00 0.00 3.86
459 461 0.752658 TGTGTGTGGTCAGGACTCAG 59.247 55.000 0.00 0.00 0.00 3.35
460 462 1.134521 GTTGTGTGTGGTCAGGACTCA 60.135 52.381 0.00 0.00 0.00 3.41
461 463 1.134521 TGTTGTGTGTGGTCAGGACTC 60.135 52.381 0.00 0.00 0.00 3.36
462 464 0.908910 TGTTGTGTGTGGTCAGGACT 59.091 50.000 0.00 0.00 0.00 3.85
464 466 2.088423 GTTTGTTGTGTGTGGTCAGGA 58.912 47.619 0.00 0.00 0.00 3.86
468 1510 4.025145 GCTACTAGTTTGTTGTGTGTGGTC 60.025 45.833 0.00 0.00 0.00 4.02
473 1515 4.550063 CGTGTGCTACTAGTTTGTTGTGTG 60.550 45.833 0.00 0.00 0.00 3.82
506 4567 4.082625 AGCGAAAAAGATGTGCATCAATGA 60.083 37.500 13.79 0.00 40.22 2.57
554 4615 3.634397 TCAGAGGGTTCCATCAATCAC 57.366 47.619 6.29 0.00 0.00 3.06
582 4643 0.916086 ACCAGTGTTGTGGACTTCCA 59.084 50.000 0.00 0.00 45.30 3.53
606 4667 0.256752 TGTGGATTGGGATGGAGCAG 59.743 55.000 0.00 0.00 0.00 4.24
781 4849 3.430218 CGTAGTAGCTATTGATTGGCTGC 59.570 47.826 0.00 0.00 38.59 5.25
799 4867 6.659361 ACACACAGATGTAGTACTACGTAG 57.341 41.667 24.40 20.97 36.72 3.51
806 4874 6.010294 ACACAGTACACACAGATGTAGTAC 57.990 41.667 14.97 14.97 40.21 2.73
810 4878 6.002082 AGAGTACACAGTACACACAGATGTA 58.998 40.000 9.68 0.00 36.72 2.29
838 4914 2.529780 ATCTCTGCTGATGCTACTGC 57.470 50.000 0.00 0.00 40.48 4.40
839 4915 4.548494 CACTATCTCTGCTGATGCTACTG 58.452 47.826 0.00 0.00 40.48 2.74
869 5375 2.045926 CTCCCCGTGCCTTCAAGG 60.046 66.667 0.00 0.00 40.86 3.61
889 5395 2.032071 CGGGCATATTCGGTCCCC 59.968 66.667 0.00 0.00 35.32 4.81
890 5396 1.004918 CTCGGGCATATTCGGTCCC 60.005 63.158 0.00 0.00 35.42 4.46
891 5397 1.004918 CCTCGGGCATATTCGGTCC 60.005 63.158 0.00 0.00 0.00 4.46
892 5398 0.106149 AACCTCGGGCATATTCGGTC 59.894 55.000 0.00 0.00 0.00 4.79
909 5415 7.067008 TGCTGTTATTTATAGGCTTCTTCCAAC 59.933 37.037 0.00 0.00 0.00 3.77
956 5463 7.266400 CAGAGTTAGCTAGGTAAAGGGTAAAG 58.734 42.308 15.67 0.00 0.00 1.85
957 5464 6.155737 CCAGAGTTAGCTAGGTAAAGGGTAAA 59.844 42.308 15.67 0.00 0.00 2.01
958 5465 5.659971 CCAGAGTTAGCTAGGTAAAGGGTAA 59.340 44.000 15.67 0.00 0.00 2.85
959 5466 5.043881 TCCAGAGTTAGCTAGGTAAAGGGTA 60.044 44.000 15.67 0.00 0.00 3.69
960 5467 4.031611 CCAGAGTTAGCTAGGTAAAGGGT 58.968 47.826 15.67 1.94 0.00 4.34
961 5468 4.287552 TCCAGAGTTAGCTAGGTAAAGGG 58.712 47.826 15.67 13.72 0.00 3.95
962 5469 5.422650 AGTTCCAGAGTTAGCTAGGTAAAGG 59.577 44.000 15.67 14.30 0.00 3.11
968 5475 4.953579 AGAGAAGTTCCAGAGTTAGCTAGG 59.046 45.833 0.00 0.00 0.00 3.02
1018 5525 4.649310 TGTTCGTGGCGTGCGCTA 62.649 61.111 16.21 7.59 41.60 4.26
1025 5532 0.876777 TACCAAGTGTGTTCGTGGCG 60.877 55.000 0.00 0.00 39.82 5.69
1041 5551 0.037975 CCGGCCGGTGTATGTATACC 60.038 60.000 36.64 0.00 34.50 2.73
1042 5552 0.037975 CCCGGCCGGTGTATGTATAC 60.038 60.000 40.52 0.00 0.00 1.47
1044 5554 1.458020 TCCCGGCCGGTGTATGTAT 60.458 57.895 40.52 0.00 0.00 2.29
1045 5555 2.043147 TCCCGGCCGGTGTATGTA 60.043 61.111 40.52 15.19 0.00 2.29
1046 5556 3.467226 CTCCCGGCCGGTGTATGT 61.467 66.667 40.52 0.00 0.00 2.29
1047 5557 2.918230 GAACTCCCGGCCGGTGTATG 62.918 65.000 40.52 25.87 37.36 2.39
1069 5579 2.202878 CGGGGCGGTGTCTGTATG 60.203 66.667 0.00 0.00 0.00 2.39
1070 5580 2.363276 TCGGGGCGGTGTCTGTAT 60.363 61.111 0.00 0.00 0.00 2.29
1071 5581 3.066190 CTCGGGGCGGTGTCTGTA 61.066 66.667 0.00 0.00 0.00 2.74
1073 5583 4.742201 CACTCGGGGCGGTGTCTG 62.742 72.222 0.00 0.00 0.00 3.51
1083 5593 1.079543 CTCCTGCAACTCACTCGGG 60.080 63.158 0.00 0.00 0.00 5.14
1468 6021 6.325596 AGCACATGCATATACGTATCTACAG 58.674 40.000 12.24 2.12 45.16 2.74
1506 6062 0.737219 GGTGCAGATCAACAGATGGC 59.263 55.000 0.00 0.00 31.06 4.40
1566 6133 4.759782 AGTTATGACATGTACTCAGGCAC 58.240 43.478 0.00 0.00 0.00 5.01
1576 6143 8.321353 TCCAGTTAATCAAGAGTTATGACATGT 58.679 33.333 0.00 0.00 0.00 3.21
1624 6395 5.670149 TTAAGAACCGATCGAGCTACTAG 57.330 43.478 18.66 0.00 0.00 2.57
1625 6396 6.630444 AATTAAGAACCGATCGAGCTACTA 57.370 37.500 18.66 0.00 0.00 1.82
1626 6397 5.517322 AATTAAGAACCGATCGAGCTACT 57.483 39.130 18.66 5.62 0.00 2.57
1699 6475 2.279741 TGCATCTTGATTACGAGTGCC 58.720 47.619 0.00 0.00 35.61 5.01
1721 6510 2.802787 ATACCTACTAGCTGCGCTTG 57.197 50.000 9.73 8.97 40.44 4.01
1772 6561 4.580044 CGGCACATTGCGCGCTAG 62.580 66.667 33.29 22.85 46.21 3.42
1778 6567 0.523125 CATTACCACGGCACATTGCG 60.523 55.000 0.00 0.00 46.21 4.85
1792 6581 2.160813 CGTGCAAACCACCCTACATTAC 59.839 50.000 0.00 0.00 41.53 1.89
1819 6608 1.136984 CACGGGAGCTGACGTAGAC 59.863 63.158 11.42 0.00 42.04 2.59
1899 6689 6.371595 TGGGCAATCAATCCTTGTTTTTAT 57.628 33.333 0.00 0.00 0.00 1.40
1902 6692 4.581868 CATGGGCAATCAATCCTTGTTTT 58.418 39.130 0.00 0.00 0.00 2.43
1919 6709 7.788026 TCCTTATTAGGTTATATACGCATGGG 58.212 38.462 8.44 8.44 42.60 4.00
1920 6710 9.095065 GTTCCTTATTAGGTTATATACGCATGG 57.905 37.037 0.00 0.00 42.60 3.66
1964 6756 2.161410 TGGTTATTAAGCAAGCACGCAG 59.839 45.455 5.86 0.00 35.70 5.18
2002 6794 9.474313 TCACAATGTTAGGCCTTTCTTTATATT 57.526 29.630 12.58 0.00 0.00 1.28
2013 6805 0.981183 TCCGTCACAATGTTAGGCCT 59.019 50.000 11.78 11.78 0.00 5.19
2014 6806 2.038387 ATCCGTCACAATGTTAGGCC 57.962 50.000 0.00 0.00 0.00 5.19
2143 7223 5.358160 TGATCGATCGATGATACTTATGGCT 59.642 40.000 33.86 6.57 34.60 4.75
2154 7234 3.821033 TCCTTAGCTTGATCGATCGATGA 59.179 43.478 33.86 24.17 34.60 2.92
2211 7293 1.792949 AGCAAGTAGAAAACACGCGAG 59.207 47.619 15.93 7.88 33.88 5.03
2212 7294 1.790623 GAGCAAGTAGAAAACACGCGA 59.209 47.619 15.93 0.00 33.88 5.87
2280 7415 0.405198 TCACCATGTGCCATTGGAGT 59.595 50.000 6.95 0.00 36.79 3.85
2293 7428 2.094675 GCACAATTACCAGCTCACCAT 58.905 47.619 0.00 0.00 0.00 3.55
2387 7576 0.250252 TGCTGCTTTCATCGGTGTCA 60.250 50.000 0.00 0.00 0.00 3.58
2388 7577 0.874390 TTGCTGCTTTCATCGGTGTC 59.126 50.000 0.00 0.00 0.00 3.67
2422 7611 0.752054 TGGCAAAAGCAGAGGTTTGG 59.248 50.000 0.00 0.00 35.66 3.28
2440 7629 5.758296 TCTGTACTTTAACTTGCTGGTTCTG 59.242 40.000 0.00 0.00 0.00 3.02
2447 7636 3.988517 GAGCGTCTGTACTTTAACTTGCT 59.011 43.478 0.00 0.00 0.00 3.91
2688 7931 2.434185 GTTCGGGCGCATCTGTCA 60.434 61.111 10.83 0.00 0.00 3.58
2691 7934 2.586079 ATCGTTCGGGCGCATCTG 60.586 61.111 10.83 0.00 0.00 2.90
2785 8094 3.120792 CCGTATGTGTACATGCACTACC 58.879 50.000 12.42 0.00 38.62 3.18
2844 8153 8.975439 CATCCTCTTTTTGAAATGAAAGAACAG 58.025 33.333 0.00 0.00 40.30 3.16
2853 8162 7.426456 CGACGAATACATCCTCTTTTTGAAATG 59.574 37.037 0.00 0.00 0.00 2.32
2854 8163 7.414098 CCGACGAATACATCCTCTTTTTGAAAT 60.414 37.037 0.00 0.00 0.00 2.17
2859 8168 3.621715 GCCGACGAATACATCCTCTTTTT 59.378 43.478 0.00 0.00 0.00 1.94
2865 8174 0.674534 GAGGCCGACGAATACATCCT 59.325 55.000 0.00 0.00 0.00 3.24
2866 8175 0.319641 GGAGGCCGACGAATACATCC 60.320 60.000 0.00 0.00 0.00 3.51
2900 8210 5.600908 AAATCATCACAAAAATGCTGCAC 57.399 34.783 3.57 0.00 0.00 4.57
3030 8341 5.290386 CCGGCTACTACTAGGATTTTTGAG 58.710 45.833 0.00 0.00 0.00 3.02
3034 8345 2.367894 GGCCGGCTACTACTAGGATTTT 59.632 50.000 28.56 0.00 0.00 1.82
3043 8354 0.321830 TTTGGTTGGCCGGCTACTAC 60.322 55.000 28.56 16.60 37.67 2.73
3066 8377 7.865820 AGATGGTCTCTTGGATTTTATTGAGA 58.134 34.615 0.00 0.00 0.00 3.27
3069 8380 8.742777 TGAAAGATGGTCTCTTGGATTTTATTG 58.257 33.333 0.00 0.00 43.60 1.90
3070 8381 8.884124 TGAAAGATGGTCTCTTGGATTTTATT 57.116 30.769 0.00 0.00 43.60 1.40
3072 8383 8.742777 CAATGAAAGATGGTCTCTTGGATTTTA 58.257 33.333 0.00 0.00 43.60 1.52
3076 8387 5.198965 CCAATGAAAGATGGTCTCTTGGAT 58.801 41.667 0.00 0.00 43.60 3.41
3077 8388 4.043310 ACCAATGAAAGATGGTCTCTTGGA 59.957 41.667 5.09 0.00 46.94 3.53
3107 8418 9.334947 CACACCTAGATAGTGAAATGATCATTT 57.665 33.333 29.31 29.31 43.14 2.32
3110 8421 6.686378 GCCACACCTAGATAGTGAAATGATCA 60.686 42.308 0.00 0.00 38.63 2.92
3113 8424 4.469586 TGCCACACCTAGATAGTGAAATGA 59.530 41.667 4.82 0.00 38.63 2.57
3137 8448 1.542915 GTCAGCACTACCGTTGTCCTA 59.457 52.381 0.00 0.00 0.00 2.94
3192 8504 8.644374 AGAAGTGTTAATAGCCAATTTTACCA 57.356 30.769 0.00 0.00 0.00 3.25
3209 8521 8.637986 CCATAGAGAAGAATAGCTAGAAGTGTT 58.362 37.037 0.00 0.00 0.00 3.32
3213 8525 8.402798 TCACCATAGAGAAGAATAGCTAGAAG 57.597 38.462 0.00 0.00 0.00 2.85
3214 8526 8.768501 TTCACCATAGAGAAGAATAGCTAGAA 57.231 34.615 0.00 0.00 0.00 2.10
3216 8528 9.255304 GTTTTCACCATAGAGAAGAATAGCTAG 57.745 37.037 0.00 0.00 0.00 3.42
3218 8530 7.550906 GTGTTTTCACCATAGAGAAGAATAGCT 59.449 37.037 0.00 0.00 44.31 3.32
3219 8531 7.689299 GTGTTTTCACCATAGAGAAGAATAGC 58.311 38.462 0.00 0.00 44.31 2.97
3253 8742 5.233988 TGCTTGGTATTGGTTGCAATAAAC 58.766 37.500 0.59 3.46 0.00 2.01
3274 8763 1.596727 GATGAAGAGGTGAGCGAATGC 59.403 52.381 0.00 0.00 43.24 3.56
3293 8782 0.534877 AAAGCGGCTCACACACATGA 60.535 50.000 1.45 0.00 0.00 3.07
3501 9051 7.880160 TTGTATGTGGGGAAAATATTGAGAG 57.120 36.000 0.00 0.00 0.00 3.20
3538 9088 8.567948 CCTGAATACTAAAGACAACATGTGTTT 58.432 33.333 0.00 9.99 44.48 2.83
3547 9097 8.383175 AGAAATGTCCCTGAATACTAAAGACAA 58.617 33.333 0.00 0.00 36.46 3.18
3610 9161 9.239551 GTAATTTCCCTATTAAAACTCCACAGT 57.760 33.333 0.00 0.00 0.00 3.55
3640 9298 4.588951 TCTGTCTCACACTGTCTATTTGGT 59.411 41.667 0.00 0.00 0.00 3.67
3732 9496 0.323360 TAGGTGCAAACATGGGAGGC 60.323 55.000 0.00 0.00 0.00 4.70
3802 9567 3.821033 GCTCCATTACCTATTTCCGCATT 59.179 43.478 0.00 0.00 0.00 3.56
3815 9580 0.249657 CCAGGCTCGAGCTCCATTAC 60.250 60.000 34.46 17.44 41.70 1.89
3911 9697 7.399245 TTTTTGAAAAGTACAGGCAAGTAGT 57.601 32.000 0.00 0.00 0.00 2.73
3938 9724 7.277396 TGAAACTTTACAGGCAAGTAGTACTT 58.723 34.615 9.85 9.85 39.39 2.24
3940 9726 7.360946 CCATGAAACTTTACAGGCAAGTAGTAC 60.361 40.741 0.00 0.00 33.12 2.73
3966 9782 7.908082 TGTAGCTCGCATAAAAATGTATTTCAC 59.092 33.333 0.00 0.00 0.00 3.18
4161 9982 9.559732 AATTTTCATTTTTCCTTCTACCCTTTG 57.440 29.630 0.00 0.00 0.00 2.77
4170 9991 5.700832 AGCCCGAAATTTTCATTTTTCCTTC 59.299 36.000 9.66 0.00 32.35 3.46
4173 9994 5.468409 TGAAGCCCGAAATTTTCATTTTTCC 59.532 36.000 9.66 0.00 32.35 3.13
4179 10001 3.768757 TCCATGAAGCCCGAAATTTTCAT 59.231 39.130 9.66 0.00 40.00 2.57
4195 10017 2.135903 TTGGCTTTCGGGCTCCATGA 62.136 55.000 0.00 0.00 41.48 3.07
4251 10303 4.248058 GGCAAAAGATTGACCAGAATTGG 58.752 43.478 0.00 0.00 42.46 3.16
4271 10323 1.266867 AAATGGAGGGGCACAATGGC 61.267 55.000 0.00 0.00 42.88 4.40
4311 10363 3.868200 CTTCACCCGGCCTGCCTTT 62.868 63.158 6.60 0.00 0.00 3.11
4351 10403 9.850628 CCAACATATGCATTATCTCCTTTAATG 57.149 33.333 3.54 0.00 39.15 1.90
4360 10412 4.812096 GCCCCTCCAACATATGCATTATCT 60.812 45.833 3.54 0.00 0.00 1.98
4364 10416 1.708341 GCCCCTCCAACATATGCATT 58.292 50.000 3.54 0.00 0.00 3.56
4370 10422 0.620990 TAACCCGCCCCTCCAACATA 60.621 55.000 0.00 0.00 0.00 2.29
4383 10435 4.238514 CTGAACTCTCAAACTCTAACCCG 58.761 47.826 0.00 0.00 0.00 5.28
4423 10475 1.947456 GACAAAAGTCCACAGACCACC 59.053 52.381 0.00 0.00 44.72 4.61
4424 10476 2.872858 GAGACAAAAGTCCACAGACCAC 59.127 50.000 0.00 0.00 44.72 4.16
4428 10480 2.956333 TCTCGAGACAAAAGTCCACAGA 59.044 45.455 12.08 0.00 0.00 3.41
4440 10492 1.000955 GCCTTTGTTCCTCTCGAGACA 59.999 52.381 12.08 5.74 0.00 3.41
4442 10494 1.273606 CTGCCTTTGTTCCTCTCGAGA 59.726 52.381 15.70 15.70 0.00 4.04
4446 10498 1.072331 TGGTCTGCCTTTGTTCCTCTC 59.928 52.381 0.00 0.00 35.27 3.20
4473 10525 7.176515 CCCACATAAGCATAAGCAATAACCATA 59.823 37.037 0.00 0.00 45.49 2.74
4496 10548 0.828022 CCTGCGGTGTTATCTACCCA 59.172 55.000 0.00 0.00 34.66 4.51
4504 10556 3.369681 CCCTTATACAACCTGCGGTGTTA 60.370 47.826 0.94 0.00 35.34 2.41
4505 10557 2.617021 CCCTTATACAACCTGCGGTGTT 60.617 50.000 0.94 0.00 35.34 3.32
4513 10565 2.297701 CGCATTGCCCTTATACAACCT 58.702 47.619 2.41 0.00 0.00 3.50
4521 10573 2.680841 GACACAATACGCATTGCCCTTA 59.319 45.455 8.31 0.00 44.62 2.69
4533 10585 1.588404 CCGCTCACATCGACACAATAC 59.412 52.381 0.00 0.00 0.00 1.89
4565 10617 7.404671 AACTATTATGTCATTGTGGTTTCCC 57.595 36.000 0.00 0.00 0.00 3.97
4571 10623 4.574421 TGGCGAACTATTATGTCATTGTGG 59.426 41.667 0.00 0.00 0.00 4.17
4572 10624 5.733226 TGGCGAACTATTATGTCATTGTG 57.267 39.130 0.00 0.00 0.00 3.33
4576 10628 6.993079 TCTACATGGCGAACTATTATGTCAT 58.007 36.000 0.00 0.00 34.22 3.06
4577 10629 6.399639 TCTACATGGCGAACTATTATGTCA 57.600 37.500 0.00 0.00 34.22 3.58
4592 10644 7.284261 TCTCTCTCTAAACACTCATCTACATGG 59.716 40.741 0.00 0.00 0.00 3.66
4671 10861 7.610865 TCAAACCTTGTTCACTTTTCATCTTT 58.389 30.769 0.00 0.00 0.00 2.52
4687 10877 7.339212 TCCTTATCATGTACCATTCAAACCTTG 59.661 37.037 0.00 0.00 0.00 3.61
4703 10893 8.616076 GGACAAGTTAATTCACTCCTTATCATG 58.384 37.037 0.00 0.00 0.00 3.07
4705 10895 7.685481 TGGACAAGTTAATTCACTCCTTATCA 58.315 34.615 0.00 0.00 0.00 2.15
4708 10898 7.769044 GCTATGGACAAGTTAATTCACTCCTTA 59.231 37.037 0.00 0.00 0.00 2.69
4711 10901 5.297029 GGCTATGGACAAGTTAATTCACTCC 59.703 44.000 0.00 0.00 0.00 3.85
4753 11000 1.774639 ACACCGTCATCACACGTTAC 58.225 50.000 0.00 0.00 38.14 2.50
4756 11225 0.934496 CAAACACCGTCATCACACGT 59.066 50.000 0.00 0.00 38.14 4.49
4758 11227 3.896648 ATTCAAACACCGTCATCACAC 57.103 42.857 0.00 0.00 0.00 3.82
4767 11236 4.506288 GGAAGGAACAAAATTCAAACACCG 59.494 41.667 0.00 0.00 0.00 4.94
4793 11262 5.801531 ATAAAGCGGGGAAAACTCTTTTT 57.198 34.783 0.00 0.00 37.65 1.94
4797 11266 9.856162 TTTATAATATAAAGCGGGGAAAACTCT 57.144 29.630 1.58 0.00 0.00 3.24
4800 11269 8.738199 GCTTTATAATATAAAGCGGGGAAAAC 57.262 34.615 30.20 11.52 46.31 2.43
4825 11294 2.672195 GCGAGGGAAGGAGCAAAATTTG 60.672 50.000 0.57 0.57 0.00 2.32
4843 11634 0.724549 GGAACATTACATGCGTGCGA 59.275 50.000 5.64 0.00 0.00 5.10
4861 11652 5.389098 CGTCACCTCGTGTTATTTTACTTGG 60.389 44.000 0.00 0.00 34.79 3.61
4868 11665 1.270412 TGGCGTCACCTCGTGTTATTT 60.270 47.619 0.00 0.00 40.22 1.40
4873 11670 2.048222 CATGGCGTCACCTCGTGT 60.048 61.111 0.00 0.00 40.22 4.49
4874 11671 2.815211 CCATGGCGTCACCTCGTG 60.815 66.667 0.00 0.00 40.22 4.35
4875 11672 4.082523 CCCATGGCGTCACCTCGT 62.083 66.667 6.09 0.00 40.22 4.18
4876 11673 3.605749 AACCCATGGCGTCACCTCG 62.606 63.158 6.09 0.00 40.22 4.63
4877 11674 2.040544 CAACCCATGGCGTCACCTC 61.041 63.158 6.09 0.00 40.22 3.85
4879 11676 2.282180 ACAACCCATGGCGTCACC 60.282 61.111 6.09 0.00 39.84 4.02
4880 11677 1.452145 AACACAACCCATGGCGTCAC 61.452 55.000 6.09 0.00 0.00 3.67
4881 11678 0.753479 AAACACAACCCATGGCGTCA 60.753 50.000 6.09 0.00 0.00 4.35
4883 11680 1.739049 CAAACACAACCCATGGCGT 59.261 52.632 6.09 2.76 0.00 5.68
4884 11681 1.664333 GCAAACACAACCCATGGCG 60.664 57.895 6.09 2.02 0.00 5.69
4887 11684 0.390124 AGCTGCAAACACAACCCATG 59.610 50.000 1.02 0.00 0.00 3.66
4896 11699 1.368209 CCATGCCAAGCTGCAAACA 59.632 52.632 2.49 0.00 45.84 2.83
5105 11908 1.080974 GACGACCCACCGTGTGTAG 60.081 63.158 0.00 0.00 43.49 2.74
5162 11965 0.108585 TCTGCGCCTGGAAGAACTTT 59.891 50.000 4.18 0.00 34.07 2.66
5438 12241 4.037565 CGTGTATCTACCAACCAGAGCATA 59.962 45.833 0.00 0.00 0.00 3.14
5765 12647 0.537828 TCACTGCTGCATTGAAGCCA 60.538 50.000 18.72 1.80 40.06 4.75
5795 12857 6.000840 TGGTGCTATATTTGTGTTGTTGAGA 58.999 36.000 0.00 0.00 0.00 3.27
5797 12859 5.048364 GGTGGTGCTATATTTGTGTTGTTGA 60.048 40.000 0.00 0.00 0.00 3.18
5831 12893 6.145209 CACATACATTGATGGATCTCGTCTTC 59.855 42.308 0.00 0.00 32.70 2.87
5832 12894 5.987953 CACATACATTGATGGATCTCGTCTT 59.012 40.000 0.00 0.00 32.70 3.01
5839 12923 5.619309 GCATCAGCACATACATTGATGGATC 60.619 44.000 13.32 0.00 44.34 3.36
6014 13209 3.343972 GCTGAAGAAGCGTGGCAA 58.656 55.556 0.00 0.00 43.45 4.52
6073 13270 2.574006 AGATGGTTGCTGCAAGAAGA 57.426 45.000 16.53 0.12 34.07 2.87
6150 13347 4.653341 TGGGAATAATGGCCTAATTTGGTG 59.347 41.667 3.32 0.00 0.00 4.17
6160 13357 3.878160 TTTTCGTTGGGAATAATGGCC 57.122 42.857 0.00 0.00 33.85 5.36
6175 13372 6.266323 TCTCGTTCAGATCTTCCTATTTTCG 58.734 40.000 0.00 0.00 0.00 3.46
6178 13375 8.887717 CAATTTCTCGTTCAGATCTTCCTATTT 58.112 33.333 0.00 0.00 0.00 1.40
6196 13393 4.035208 ACAGTGACACCGAAACAATTTCTC 59.965 41.667 0.84 0.00 37.52 2.87
6198 13395 4.035017 CACAGTGACACCGAAACAATTTC 58.965 43.478 0.84 0.00 36.32 2.17
6204 13401 0.304705 CTGCACAGTGACACCGAAAC 59.695 55.000 4.15 0.00 0.00 2.78
6262 13459 6.900194 AGTAGTAGCACCCAATGTTTATGAT 58.100 36.000 0.00 0.00 0.00 2.45
6409 13606 5.508200 TCCCGTTTTGTAATTATGCATCC 57.492 39.130 0.19 0.00 0.00 3.51
6422 13619 5.329493 GTTAGAATCCGAATTCCCGTTTTG 58.671 41.667 0.00 0.00 41.97 2.44
6424 13621 3.943381 GGTTAGAATCCGAATTCCCGTTT 59.057 43.478 0.00 0.00 41.97 3.60
6431 13628 6.174720 TCATAGCAGGTTAGAATCCGAATT 57.825 37.500 0.00 0.00 0.00 2.17
6433 13630 5.607939 TTCATAGCAGGTTAGAATCCGAA 57.392 39.130 0.00 0.00 0.00 4.30
6451 13650 7.021196 GCAGAAACACGTTGTTGTATATTCAT 58.979 34.615 4.51 0.00 40.14 2.57
6569 13781 3.876914 CGGGTGATGTTAGCATTGTACAT 59.123 43.478 0.00 0.00 35.07 2.29
6749 14002 6.621613 TGATCATCTATGTATGCTACCGTTC 58.378 40.000 0.00 0.00 0.00 3.95
6762 14027 6.766429 TGAAGGAACCATCTGATCATCTATG 58.234 40.000 0.00 0.92 0.00 2.23
6784 14049 8.736244 CATATTATCATTGTCCAATCTGCATGA 58.264 33.333 0.00 0.00 0.00 3.07
6855 14128 3.069300 CGGATCAATCTCAGTCTGTGGAT 59.931 47.826 0.00 2.91 0.00 3.41
6857 14130 2.482664 CCGGATCAATCTCAGTCTGTGG 60.483 54.545 0.00 0.00 0.00 4.17
6858 14131 2.167281 ACCGGATCAATCTCAGTCTGTG 59.833 50.000 9.46 0.00 0.00 3.66
6877 14150 2.388232 CGCAAAGCCGAGGTACACC 61.388 63.158 0.00 0.00 0.00 4.16
7832 16721 0.965439 TTTCCCCAATGACAAAGCCG 59.035 50.000 0.00 0.00 0.00 5.52
7833 16722 2.417243 CGATTTCCCCAATGACAAAGCC 60.417 50.000 0.00 0.00 0.00 4.35
7834 16723 2.417243 CCGATTTCCCCAATGACAAAGC 60.417 50.000 0.00 0.00 0.00 3.51
7835 16724 2.417243 GCCGATTTCCCCAATGACAAAG 60.417 50.000 0.00 0.00 0.00 2.77
7836 16725 1.548269 GCCGATTTCCCCAATGACAAA 59.452 47.619 0.00 0.00 0.00 2.83
7837 16726 1.181786 GCCGATTTCCCCAATGACAA 58.818 50.000 0.00 0.00 0.00 3.18
7838 16727 0.682855 GGCCGATTTCCCCAATGACA 60.683 55.000 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.